Citrus Sinensis ID: 024125
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 272 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ASX2 | 266 | Tropinone reductase homol | no | no | 0.959 | 0.981 | 0.618 | 6e-92 | |
| P50165 | 268 | Tropinone reductase homol | N/A | no | 0.970 | 0.985 | 0.591 | 2e-88 | |
| P50162 | 273 | Tropinone reductase 1 OS= | N/A | no | 0.926 | 0.923 | 0.593 | 8e-85 | |
| P50164 | 260 | Tropinone reductase 2 OS= | N/A | no | 0.933 | 0.976 | 0.583 | 1e-82 | |
| P50163 | 260 | Tropinone reductase 2 OS= | N/A | no | 0.937 | 0.980 | 0.586 | 6e-81 | |
| Q9GKX2 | 260 | Dehydrogenase/reductase S | yes | no | 0.926 | 0.969 | 0.338 | 5e-34 | |
| P50199 | 256 | Gluconate 5-dehydrogenase | yes | no | 0.897 | 0.953 | 0.350 | 2e-33 | |
| Q8SPU8 | 279 | Dehydrogenase/reductase S | yes | no | 0.922 | 0.899 | 0.343 | 7e-33 | |
| Q9BTZ2 | 278 | Dehydrogenase/reductase S | yes | no | 0.926 | 0.906 | 0.346 | 1e-32 | |
| Q5RCF8 | 278 | Dehydrogenase/reductase S | yes | no | 0.926 | 0.906 | 0.346 | 1e-32 |
| >sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 337 bits (863), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 164/265 (61%), Positives = 200/265 (75%), Gaps = 4/265 (1%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA AE +S RWSLK T LVTGGT+GIG A VEE AG GAV+HTC+RNE ELN+CL +
Sbjct: 1 MAGAE---QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK 57
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ KGF V+GSVCDA+ +REKL+Q V S F GKL+IL+NN+G KPT++Y+AE++S
Sbjct: 58 WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS 117
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
++TN ES YHL QL +PLLKASG G+I+F+SS+ G+ GSIY ATK A+NQL RN
Sbjct: 118 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARN 177
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LACEWA D IR N+VAP T L E + ++ EF VI+R PL R GEPEEV+SLVA+L
Sbjct: 178 LACEWASDGIRANAVAPAVIATPLAEAVYDD-EFKKVVISRKPLGRFGEPEEVSSLVAFL 236
Query: 241 CLPAASYITGQIISVDGGFTANGFN 265
C+PAASYITGQ I VDGG T NGF+
Sbjct: 237 CMPAASYITGQTICVDGGLTVNGFS 261
|
Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1 | Back alignment and function description |
|---|
Score = 325 bits (834), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/267 (59%), Positives = 200/267 (74%), Gaps = 3/267 (1%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA E RWSL+GMTALVTGGTRGIG A VEELA GA V+TCSR++ +L++CL++
Sbjct: 1 MAGREIGGGDRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEK 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W+ KGF VSG VCD +S QR+ L++ V S FNGKLNIL+NN GT I K ++AE+YS
Sbjct: 61 WRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
IM TNFE++Y+LCQL +PLLKASG SIVF SS G+ V SIY A+K A+NQ+T++
Sbjct: 121 IIMGTNFEASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKS 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVE---RLLENKEFVDKVIARTPLQRVGEPEEVASLV 237
LACEWAKD+IR N+VAPW T ++E ++ K+ ++ +I R P++R GEP EV+SLV
Sbjct: 181 LACEWAKDSIRVNAVAPWIINTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLV 240
Query: 238 AYLCLPAASYITGQIISVDGGFTANGF 264
YLCLP ASYITGQII VDGG+T NGF
Sbjct: 241 TYLCLPTASYITGQIICVDGGYTVNGF 267
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Datura stramonium (taxid: 4076) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 313 bits (802), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 152/256 (59%), Positives = 194/256 (75%), Gaps = 4/256 (1%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSLKG TALVTGG++GIG A VEELAGLGA V+TCSRNE EL++CL+ W+ KG V GS
Sbjct: 16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 75
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCD S +R+KL+Q V F+GKLNILVNN G I K +++ ++Y+ IM TNFE+ Y
Sbjct: 76 VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 135
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ YPLLKAS G+++F+SS+ G S + S S+Y A+K A+NQ+T++LACEWAKDNIR
Sbjct: 136 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 195
Query: 192 TNSVAPWYTKTSLVERLLE----NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
NSVAP T LVE ++ KE +D I +TP+ R G+P+EV++L+A+LC PAASY
Sbjct: 196 VNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 255
Query: 248 ITGQIISVDGGFTANG 263
ITGQII DGGFTANG
Sbjct: 256 ITGQIIWADGGFTANG 271
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Catalyzes the stereospecific reduction of tropinone to tropine. Datura stramonium (taxid: 4076) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 0 EC: 6 |
| >sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 306 bits (783), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/257 (58%), Positives = 192/257 (74%), Gaps = 3/257 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ RW+L+G TALVTGG+RGIG VEELA LGA V+TCSRN+ EL++CL +W+SKGF V
Sbjct: 2 AGRWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVE 61
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
SVCD +S +RE+ ++ V + F+GKLNILVNN G I K +Y+ E+YS IM+ NFE+
Sbjct: 62 ASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEA 121
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
YHL L +P LKAS G++VFISS+ G S + ++YGATK AM+QLTR LA EWAKDN
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDN 181
Query: 190 IRTNSVAPWYTKTSLVERLL---ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
IR N V P TS+VE + E KE +DK+I R L+R+GEP+E+A++VA+LC PAAS
Sbjct: 182 IRVNGVGPGVIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAAS 241
Query: 247 YITGQIISVDGGFTANG 263
Y+TGQII VDGGF ANG
Sbjct: 242 YVTGQIIYVDGGFMANG 258
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Catalyzes the stereospecific reduction of tropinone to pseudotropine. Hyoscyamus niger (taxid: 4079) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 6 |
| >sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 300 bits (769), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 152/259 (58%), Positives = 190/259 (73%), Gaps = 4/259 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ RW+L+G TALVTGG+RGIG VEELA LGA V+TCSRN+ ELN CL +W+SKGF V
Sbjct: 2 AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 61
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
SVCD +S +R++L+ V + F+GKLNILVNN G I K +Y+ E+YS IM+ NFE+
Sbjct: 62 ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEA 121
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
YHL L +P LKAS G++VFISSV G V ++YGATK AM+QLTR LA EWAKDN
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 181
Query: 190 IRTNSVAPWYTKTSLVERLL---ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
IR N V P TSLVE + E KE ++K+I R L+R+GEP+E+A++VA+LC PAAS
Sbjct: 182 IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAAS 241
Query: 247 YITGQIISVDGGFTAN-GF 264
Y+TGQII VDGG AN GF
Sbjct: 242 YVTGQIIYVDGGLMANCGF 260
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Catalyzes the stereospecific reduction of tropinone to pseudotropine. Datura stramonium (taxid: 4076) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 6 |
| >sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member 4 (Fragment) OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 2/254 (0%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG 65
SS + R L A+VT T GIG A LA GA V SR + +++ + Q++G
Sbjct: 3 SSGVTRRDPLANKVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEG 62
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMT 124
V+G+VC + RE+L+ +G ++ILV+N N ++ + E + KI+
Sbjct: 63 LSVTGTVCHVGKAEDRERLVA-TALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKILD 121
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
N ++ + + V P ++ G GS+V ++S+ + Y +K A+ LT+NLA E
Sbjct: 122 INVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALE 181
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
A NIR N +AP KTS + L E+K + +I + ++R+G+PEE A +V++LC
Sbjct: 182 LAAQNIRVNCLAPGLIKTSFSKALWEDKAQEENIIQKLRIRRLGKPEECAGIVSFLCSED 241
Query: 245 ASYITGQIISVDGG 258
ASYITG+ + V GG
Sbjct: 242 ASYITGETVVVAGG 255
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Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Oryctolagus cuniculus (taxid: 9986) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|P50199|GNO_GLUOX Gluconate 5-dehydrogenase OS=Gluconobacter oxydans (strain 621H) GN=gno PE=1 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 135/251 (53%), Gaps = 7/251 (2%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+SL G ALVTG +RGIG + LA GA V RN L+ ++++G S +V
Sbjct: 7 FSLSGARALVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLKASTAV 66
Query: 73 CDAASPDQREKLIQEVGS--KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D D +I V + + G ++IL+NN G R P E+S +++ +M+TN +
Sbjct: 67 FDVTDQD---AVIDGVAAIERDMGPIDILINNAGIQRRAPLEEFSRKDWDDLMSTNVNAV 123
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ + Q V + G G IV I SV L+ G Y ATK A+ LT+ +A +W +
Sbjct: 124 FFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAP-YTATKGAVKNLTKGMATDWGRHG 182
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
++ N +AP Y T + ERL+ ++EF D + RTP R G+ EE+ +L A+S++
Sbjct: 183 LQINGLAPGYFATEMTERLVADEEFTDWLCKRTPAGRWGQVEELVGAAVFLSSRASSFVN 242
Query: 250 GQIISVDGGFT 260
GQ++ VDGG T
Sbjct: 243 GQVLMVDGGIT 253
|
Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD. Gluconobacter oxydans (strain 621H) (taxid: 290633) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 9 |
| >sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 139/262 (53%), Gaps = 11/262 (4%)
Query: 7 SFKSSRWSLKGM---------TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57
S+KS R + GM ALVT T GIG A LA GA V SR + +++
Sbjct: 14 SWKSVRMASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRA 73
Query: 58 LKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSA 116
+ + +G V+G+VC + RE+L+ K +G ++IL++N + ++
Sbjct: 74 VATLKGEGLSVTGTVCHVGKAEDRERLVA-TAVKLHGGVDILISNAAVSPFFGSLMDVPE 132
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176
E + KI+ N ++T L + V P + G GSIV +SS+ S S Y +K A+
Sbjct: 133 EVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLG 192
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASL 236
LT+NLA E A+ N+R N +AP +TS L E+ + + A ++R+G+PEE A +
Sbjct: 193 LTKNLALELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQIKRIGKPEECAGI 252
Query: 237 VAYLCLPAASYITGQIISVDGG 258
V++LC ASYITG+ + V GG
Sbjct: 253 VSFLCSEDASYITGETVVVAGG 274
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 134/254 (52%), Gaps = 2/254 (0%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG 65
SS + R L ALVT T GIG A LA GA V SR + +++ + Q +G
Sbjct: 21 SSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEG 80
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMT 124
V+G+VC + RE+L+ K +G ++ILV+N N ++ + E + K +
Sbjct: 81 LSVTGTVCHVGKAEDRERLVA-TAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLD 139
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
N ++ + + V P ++ G GS+V +SS+ S S Y +K A+ LT+ LA E
Sbjct: 140 INVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIE 199
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
A NIR N +AP KTS L +KE + + ++R+GEPE+ A +V++LC
Sbjct: 200 LAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSED 259
Query: 245 ASYITGQIISVDGG 258
ASYITG+ + V GG
Sbjct: 260 ASYITGETVVVGGG 273
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 134/254 (52%), Gaps = 2/254 (0%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG 65
SS + R L ALVT T GIG A LA GA V SR + +++ + Q +G
Sbjct: 21 SSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEG 80
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMT 124
V+G+VC + RE+L+ K +G ++ILV+N N ++ + E + K +
Sbjct: 81 LSVTGTVCHVGKAEDRERLVA-TAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLD 139
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
N ++ + + V P ++ G GS+V +SS+ S S Y +K A+ LT+ LA E
Sbjct: 140 INVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIE 199
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
A NIR N +AP KTS L +KE + + ++R+GEPE+ A +V++LC
Sbjct: 200 LAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSED 259
Query: 245 ASYITGQIISVDGG 258
ASYITG+ + V GG
Sbjct: 260 ASYITGETVVVGGG 273
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 272 | ||||||
| 255566458 | 272 | tropinone reductase, putative [Ricinus c | 0.992 | 0.992 | 0.803 | 1e-124 | |
| 224098461 | 266 | predicted protein [Populus trichocarpa] | 0.966 | 0.988 | 0.787 | 1e-121 | |
| 449465852 | 273 | PREDICTED: tropinone reductase homolog A | 0.996 | 0.992 | 0.749 | 1e-118 | |
| 297810701 | 262 | hypothetical protein ARALYDRAFT_487407 [ | 0.933 | 0.969 | 0.787 | 1e-116 | |
| 225449410 | 268 | PREDICTED: tropinone reductase homolog A | 0.985 | 1.0 | 0.723 | 1e-114 | |
| 15239327 | 264 | tropine dehydrogenase [Arabidopsis thali | 0.948 | 0.977 | 0.759 | 1e-114 | |
| 388490946 | 271 | unknown [Lotus japonicus] | 0.992 | 0.996 | 0.755 | 1e-114 | |
| 388514699 | 271 | unknown [Lotus japonicus] | 0.992 | 0.996 | 0.755 | 1e-114 | |
| 21536785 | 264 | short chain alcohol dehydrogenase-like [ | 0.948 | 0.977 | 0.755 | 1e-113 | |
| 388501792 | 269 | unknown [Medicago truncatula] | 0.970 | 0.981 | 0.734 | 1e-113 |
| >gi|255566458|ref|XP_002524214.1| tropinone reductase, putative [Ricinus communis] gi|223536491|gb|EEF38138.1| tropinone reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/270 (80%), Positives = 241/270 (89%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA AESSFK S WSL G TALVTGGTRGIG ATV ELA LGA VHTCSRN ELNKCLKE
Sbjct: 1 MAMAESSFKESIWSLHGRTALVTGGTRGIGNATVVELARLGARVHTCSRNGEELNKCLKE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W+ KG +V+GSVCDA+S QREKLI+EVGS FNG LNILVNNVGTNIRKPT EY+AEEYS
Sbjct: 61 WEEKGLLVTGSVCDASSRAQREKLIEEVGSVFNGSLNILVNNVGTNIRKPTNEYTAEEYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+IM TNFES YH+CQL +PLLKASGVGSIVFISSV GL H+GSGSIYGATK A++QLT+N
Sbjct: 121 EIMITNFESAYHMCQLAHPLLKASGVGSIVFISSVAGLQHIGSGSIYGATKGAIHQLTKN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LACEWAKDNIRTNSVAPWY +TSLVERLL+ KEFV+KV+A+TPL+R+GEP EV+SLVA+L
Sbjct: 181 LACEWAKDNIRTNSVAPWYIRTSLVERLLKIKEFVEKVVAKTPLKRIGEPTEVSSLVAFL 240
Query: 241 CLPAASYITGQIISVDGGFTANGFNPGIRL 270
CLPAASYITGQIISVDGG TANGF+ G+RL
Sbjct: 241 CLPAASYITGQIISVDGGMTANGFDSGMRL 270
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224098461|ref|XP_002311182.1| predicted protein [Populus trichocarpa] gi|222851002|gb|EEE88549.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/264 (78%), Positives = 236/264 (89%), Gaps = 1/264 (0%)
Query: 4 AESS-FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62
AESS FK SRWSL GMTALVTGGTRGIG ATVEELAG GA VHTCSRNE ELNKCLKEW+
Sbjct: 2 AESSRFKDSRWSLHGMTALVTGGTRGIGNATVEELAGFGARVHTCSRNEEELNKCLKEWE 61
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
+KGFVV+GSVCDA+S QREKLI+EVGS F+GKLNILVNNVGTNIRKPT YSAEE+S +
Sbjct: 62 AKGFVVTGSVCDASSRVQREKLIEEVGSVFHGKLNILVNNVGTNIRKPTTGYSAEEFSNL 121
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
+ TNFES YHL Q+ +PLLK SG GS+VFISSV GL H+GSGSIYGA+K A+NQLT+NLA
Sbjct: 122 LATNFESAYHLSQIAHPLLKESGAGSVVFISSVAGLLHIGSGSIYGASKGAINQLTKNLA 181
Query: 183 CEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
CEWAKDNIRTN VAPWY +TSLVE LL++K F+DK+I+RTPLQRVG+P+EV+SLV +LCL
Sbjct: 182 CEWAKDNIRTNCVAPWYIRTSLVEHLLDDKVFLDKIISRTPLQRVGDPKEVSSLVGFLCL 241
Query: 243 PAASYITGQIISVDGGFTANGFNP 266
PAA+YITGQ+ISVDGGFT NGFNP
Sbjct: 242 PAAAYITGQVISVDGGFTVNGFNP 265
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449465852|ref|XP_004150641.1| PREDICTED: tropinone reductase homolog At1g07440-like [Cucumis sativus] gi|449531117|ref|XP_004172534.1| PREDICTED: tropinone reductase homolog At1g07440-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/271 (74%), Positives = 233/271 (85%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA A S +SRWSL+G TALVTGGTRGIG A VEELAGLGA VHTC+RNE +LN+CLKE
Sbjct: 1 MAEASGSAGNSRWSLEGFTALVTGGTRGIGHAVVEELAGLGASVHTCARNESDLNQCLKE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W++KG+VV+GSVCDA+S QRE+LIQEV S FNG LNILVNNVGTNIRKP+ EYS EE S
Sbjct: 61 WEAKGYVVTGSVCDASSRTQREELIQEVASSFNGTLNILVNNVGTNIRKPSAEYSLEEVS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+MTTNFES +HL QL +PLLKASG GSIVFISSVGGL +GSGSIY ATK+A+NQLTRN
Sbjct: 121 TLMTTNFESAFHLSQLSHPLLKASGNGSIVFISSVGGLVSIGSGSIYAATKSAINQLTRN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
L CEWAKDNIR N VAPWY T LVE+L++NK VD +++RTPL R+GE +EV+SLVA+L
Sbjct: 181 LTCEWAKDNIRVNCVAPWYINTPLVEKLMKNKTLVDNIVSRTPLGRIGESKEVSSLVAFL 240
Query: 241 CLPAASYITGQIISVDGGFTANGFNPGIRLD 271
CLPAASYITGQI+SVDGGFTANGF PG+RLD
Sbjct: 241 CLPAASYITGQIMSVDGGFTANGFEPGMRLD 271
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297810701|ref|XP_002873234.1| hypothetical protein ARALYDRAFT_487407 [Arabidopsis lyrata subsp. lyrata] gi|297319071|gb|EFH49493.1| hypothetical protein ARALYDRAFT_487407 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/254 (78%), Positives = 223/254 (87%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL G TALVTGGTRGIG+A VEELA GA VHTCSRN+ ELN CL +W+S G VVSGS
Sbjct: 6 RWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKSNGLVVSGS 65
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCDA+ DQREKLIQE S F+GKLNILVNNVGTN+RKPT+EYS+EEY+KIMTTN ES +
Sbjct: 66 VCDASVRDQREKLIQEASSAFSGKLNILVNNVGTNVRKPTVEYSSEEYAKIMTTNLESAF 125
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ +PLLKASGVGSIVFISSV GL H+ SGSIYGATK A+NQLTRNLACEWA+DNIR
Sbjct: 126 HLSQIAHPLLKASGVGSIVFISSVAGLVHLQSGSIYGATKGALNQLTRNLACEWARDNIR 185
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
TN VAPWY KTSLVE LLE K+FV+ V++RTPL RVGEPEEVASLVA+LCLPAASYITGQ
Sbjct: 186 TNCVAPWYIKTSLVETLLEKKDFVEAVVSRTPLGRVGEPEEVASLVAFLCLPAASYITGQ 245
Query: 252 IISVDGGFTANGFN 265
+ISVDGGFT NGF+
Sbjct: 246 VISVDGGFTVNGFS 259
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449410|ref|XP_002277835.1| PREDICTED: tropinone reductase homolog At1g07440 [Vitis vinifera] gi|296086189|emb|CBI31630.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/268 (72%), Positives = 227/268 (84%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA F SS WSL+G TALVTGGTRGIG A VEELAGLG+ VHTCSRNE EL+KCL+E
Sbjct: 1 MAEGNGGFSSSGWSLRGTTALVTGGTRGIGYAVVEELAGLGSTVHTCSRNEAELDKCLRE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W +KGF V+GSVCD + QRE+L+++V S FNGKLNIL+NNVGTNIRKPT++++A EYS
Sbjct: 61 WHAKGFAVTGSVCDGSDRAQREQLMEKVSSIFNGKLNILINNVGTNIRKPTVDFTAAEYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
IMTTN ES YHLCQL +PLLKASG GSIVFISSV G+ +G+GSIY ATKAAMNQLT+N
Sbjct: 121 TIMTTNLESAYHLCQLAHPLLKASGAGSIVFISSVAGVLSLGTGSIYAATKAAMNQLTKN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
L+CEWAKDNIR+NSVAPWY KTSLVE LL+ ++F + VI+RTPL+R GEP+EV+SLVA+L
Sbjct: 181 LSCEWAKDNIRSNSVAPWYIKTSLVEHLLQKQDFFESVISRTPLRRPGEPKEVSSLVAFL 240
Query: 241 CLPAASYITGQIISVDGGFTANGFNPGI 268
CLP ASYITGQ+I VDGG T NGFNP I
Sbjct: 241 CLPVASYITGQVICVDGGMTVNGFNPNI 268
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15239327|ref|NP_196225.1| tropine dehydrogenase [Arabidopsis thaliana] gi|8978342|dbj|BAA98195.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] gi|27754526|gb|AAO22710.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gi|28394081|gb|AAO42448.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gi|332003577|gb|AED90960.1| tropine dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/258 (75%), Positives = 224/258 (86%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL G TALVTGGTRGIG+A VEELA GA VHTCSRN+ ELN CL +W++ G VVSGS
Sbjct: 6 RWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGS 65
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCDA+ DQREKLIQE S F+GKLNIL+NNVGTN+RKPT+EYS+EEY+KIM+TN ES +
Sbjct: 66 VCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAF 125
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ +PLLKASGVGSIVFISSV GL H+ SGSIYGATK A+NQLTRNLACEWA DNIR
Sbjct: 126 HLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIR 185
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
TN VAPWY KTSLVE LLE KEFV+ V++RTPL RVGEPEEV+SLVA+LCLPA+SYITGQ
Sbjct: 186 TNCVAPWYIKTSLVETLLEKKEFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYITGQ 245
Query: 252 IISVDGGFTANGFNPGIR 269
+ISVDGGFT NGF+ ++
Sbjct: 246 VISVDGGFTVNGFSYAMK 263
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388490946|gb|AFK33539.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/270 (75%), Positives = 234/270 (86%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MAN ESS +SSRWSLKG TALVTGGTRGIG A VEELA GA V+TCSRNEVELN CLKE
Sbjct: 1 MANPESSSRSSRWSLKGTTALVTGGTRGIGHAVVEELAEFGATVYTCSRNEVELNACLKE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ KGF VSGSVCDA+SP QREKL + V S FNGKLNILVNNVGTNIRKPTIEY+AEEYS
Sbjct: 61 WQEKGFSVSGSVCDASSPPQREKLFELVASAFNGKLNILVNNVGTNIRKPTIEYTAEEYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
K+M+TN +S +HL QL YPLLKASG GSIVFISSV L+HVGSG++Y A+KAA+NQLT+
Sbjct: 121 KLMSTNLDSAHHLSQLAYPLLKASGNGSIVFISSVAALAHVGSGAVYAASKAAINQLTKY 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LACEWAK NIR+NSVAPWYTKTSLVE +L NKE V+++++RTP++R+ E EV+SLV +L
Sbjct: 181 LACEWAKGNIRSNSVAPWYTKTSLVEPVLSNKELVNEILSRTPIKRMAETHEVSSLVTFL 240
Query: 241 CLPAASYITGQIISVDGGFTANGFNPGIRL 270
CLPAASY TGQ+ISVDGGFTANGF P +R+
Sbjct: 241 CLPAASYTTGQVISVDGGFTANGFQPSMRI 270
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388514699|gb|AFK45411.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/270 (75%), Positives = 234/270 (86%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MAN ESS +SSRWSLKG TALVTGGTRGIG A VEELA GA V+TCSRNEVELN CLKE
Sbjct: 1 MANPESSSRSSRWSLKGTTALVTGGTRGIGHAVVEELAEFGATVYTCSRNEVELNACLKE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ KGF VSGSVCDA+SP QREKL + V S FNGKLNILVNNVGTNIRKPTIEY+AEEYS
Sbjct: 61 WQEKGFSVSGSVCDASSPPQREKLFELVASAFNGKLNILVNNVGTNIRKPTIEYTAEEYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
K+M+TN +S +HL QL YPLLKASG GSIVFISSV L+HVGSG++Y A+KAA+NQLT+
Sbjct: 121 KLMSTNLDSAHHLSQLAYPLLKASGNGSIVFISSVAALAHVGSGAVYAASKAAINQLTKY 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LACEWAKDNIR+NSVAPWYTKTSLVE +L NKE V+++++RTP++ + E EV+SLV +L
Sbjct: 181 LACEWAKDNIRSNSVAPWYTKTSLVEPVLSNKELVNEILSRTPIKGMAETHEVSSLVTFL 240
Query: 241 CLPAASYITGQIISVDGGFTANGFNPGIRL 270
CLPAASYITGQ+I VDGGFTANGF P +R+
Sbjct: 241 CLPAASYITGQVIFVDGGFTANGFQPSMRI 270
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21536785|gb|AAM61117.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/258 (75%), Positives = 223/258 (86%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL G TALVTGGTRGIG+A VEELA A VHTCSRN+ ELN CL +W++ G VVSGS
Sbjct: 6 RWSLAGKTALVTGGTRGIGRAVVEELAKFCAKVHTCSRNQEELNACLNDWKANGLVVSGS 65
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCDA+ DQREKLIQE S F+GKLNIL+NNVGTN+RKPT+EYS+EEY+KIM+TN ES +
Sbjct: 66 VCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAF 125
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ +PLLKASGVGSIVFISSV GL H+ SGSIYGATK A+NQLTRNLACEWA DNIR
Sbjct: 126 HLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIR 185
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
TN VAPWY KTSLVE LLE KEFV+ V++RTPL RVGEPEEV+SLVA+LCLPA+SYITGQ
Sbjct: 186 TNCVAPWYIKTSLVETLLEKKEFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYITGQ 245
Query: 252 IISVDGGFTANGFNPGIR 269
+ISVDGGFT NGF+ ++
Sbjct: 246 VISVDGGFTVNGFSYAMK 263
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388501792|gb|AFK38962.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/264 (73%), Positives = 223/264 (84%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
M N ESS + SRWSLKG TALVTGGTRGIG A VEELA GA V TCSRNE ELNKCL E
Sbjct: 1 MENQESSMRGSRWSLKGTTALVTGGTRGIGHAVVEELAEFGATVFTCSRNEEELNKCLNE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W+ KGF V GSVCDA+SP QRE+LI++V S FNGKLNILV+N GTN+RKPTIEY+AE+YS
Sbjct: 61 WKEKGFSVYGSVCDASSPSQREELIRQVASAFNGKLNILVSNAGTNVRKPTIEYTAEDYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
K+MTTN +S YHLCQL YPLLK SG GSIVFISSV L VG+GSIY +KAA+NQLT+N
Sbjct: 121 KVMTTNLDSAYHLCQLAYPLLKESGNGSIVFISSVASLISVGTGSIYAVSKAAINQLTKN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LACEWAKDNI +N VAPWYTKTSLVE+ + NKEFVD+V++RTP++R+ E EV++LV +L
Sbjct: 181 LACEWAKDNIGSNCVAPWYTKTSLVEQFIANKEFVDEVLSRTPIKRIAETHEVSALVTFL 240
Query: 241 CLPAASYITGQIISVDGGFTANGF 264
CLPAASYITGQ +SVDGGFT NGF
Sbjct: 241 CLPAASYITGQTVSVDGGFTVNGF 264
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 272 | ||||||
| TAIR|locus:2152815 | 264 | AT5G06060 [Arabidopsis thalian | 0.933 | 0.962 | 0.700 | 1.4e-94 | |
| TAIR|locus:2043087 | 322 | AT2G29260 [Arabidopsis thalian | 0.937 | 0.791 | 0.611 | 1.2e-83 | |
| TAIR|locus:2043167 | 271 | AT2G29360 [Arabidopsis thalian | 0.974 | 0.977 | 0.582 | 1.8e-78 | |
| TAIR|locus:2043177 | 269 | SAG13 "senescence-associated g | 0.970 | 0.981 | 0.584 | 1e-77 | |
| TAIR|locus:2025072 | 266 | AT1G07440 [Arabidopsis thalian | 0.959 | 0.981 | 0.581 | 1.5e-76 | |
| TAIR|locus:2043052 | 262 | AT2G29290 [Arabidopsis thalian | 0.933 | 0.969 | 0.582 | 3.1e-76 | |
| TAIR|locus:2043152 | 268 | AT2G29370 [Arabidopsis thalian | 0.974 | 0.988 | 0.575 | 3.1e-76 | |
| TAIR|locus:2025057 | 260 | AT1G07450 [Arabidopsis thalian | 0.933 | 0.976 | 0.580 | 1e-75 | |
| TAIR|locus:2043037 | 268 | AT2G29150 [Arabidopsis thalian | 0.970 | 0.985 | 0.567 | 9.3e-75 | |
| TAIR|locus:2042992 | 260 | TRI "tropinone reductase" [Ara | 0.933 | 0.976 | 0.586 | 3.1e-74 |
| TAIR|locus:2152815 AT5G06060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 178/254 (70%), Positives = 203/254 (79%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL G TALVTGGTRGIG+A VEELA GA VHTCSRN+ ELN CL +W++ G VVSGS
Sbjct: 6 RWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGS 65
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCDA+ DQREKLIQE S F+GKLNIL+NNVGTN+RKPT+EYS+EEY+KIM+TN ES +
Sbjct: 66 VCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAF 125
Query: 132 HLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ +PLLKA IYGATK A+NQLTRNLACEWA DNIR
Sbjct: 126 HLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIR 185
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
TN VAPWY KTSLVE LLE KEFV+ V++RTPL RVGEPEEV+SLVA+LCLPA+SYITGQ
Sbjct: 186 TNCVAPWYIKTSLVETLLEKKEFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYITGQ 245
Query: 252 IISVDGGFTANGFN 265
+ISVDGGFT NGF+
Sbjct: 246 VISVDGGFTVNGFS 259
|
|
| TAIR|locus:2043087 AT2G29260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 156/255 (61%), Positives = 192/255 (75%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL GM+ALVTGGTRGIG+A VEELAGLGA VHTC+RNE EL CL +W GF V+GS
Sbjct: 65 RWSLNGMSALVTGGTRGIGRAIVEELAGLGAEVHTCARNEYELENCLSDWNRSGFRVAGS 124
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCD + QRE L++ V S F GKL+ILVNNVGTNIRKP +E++A E+S +M+TNFES +
Sbjct: 125 VCDVSDRSQREALMETVSSVFEGKLHILVNNVGTNIRKPMVEFTAGEFSTLMSTNFESVF 184
Query: 132 HLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRNLACEWAKDNIR 191
HLCQL YPLL+ + +TK A+NQLTR+LACEWAKDNIR
Sbjct: 185 HLCQLAYPLLRESKAGSVVFISSVSGFVSLKNMSVQSSTKGAINQLTRSLACEWAKDNIR 244
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+VAPWY KTS+VE++L NKE++++V + TPL R+GEP EV+S VA+LCLPA+SYITGQ
Sbjct: 245 INAVAPWYIKTSMVEQVLSNKEYLEEVYSVTPLGRLGEPREVSSAVAFLCLPASSYITGQ 304
Query: 252 IISVDGGFTANGFNP 266
I+ VDGG + NGF P
Sbjct: 305 ILCVDGGMSINGFFP 319
|
|
| TAIR|locus:2043167 AT2G29360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 155/266 (58%), Positives = 191/266 (71%)
Query: 1 MANAESSFKSS-RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59
MA S + RWSL GMTALVTGG++GIG+A VEELA LGA +HTC+R+E +L + L+
Sbjct: 1 MAKTGESLRDKPRWSLVGMTALVTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLR 60
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+WQ+KGF V+ SVCD +S D+REKL++ V + F GKLNILVNNVGT I KPT++++AE++
Sbjct: 61 KWQAKGFQVTTSVCDVSSRDKREKLMETVSTIFEGKLNILVNNVGTCIVKPTLQHTAEDF 120
Query: 120 SKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTR 179
S M TN ES +HL QL +PLLKA IYG +K AMNQL R
Sbjct: 121 SFTMATNLESAFHLSQLAHPLLKASGSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGR 180
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
NLACEWA DNIRTNSV PW+ +T LV L N+EF +V +R P+ RVGE EV+SLVA+
Sbjct: 181 NLACEWASDNIRTNSVCPWFIETPLVTESLSNEEFRKEVESRPPMGRVGEVNEVSSLVAF 240
Query: 240 LCLPAASYITGQIISVDGGFTANGFN 265
LCLPAASYITGQ I VDGGFT NGF+
Sbjct: 241 LCLPAASYITGQTICVDGGFTVNGFS 266
|
|
| TAIR|locus:2043177 SAG13 "senescence-associated gene 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 155/265 (58%), Positives = 187/265 (70%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA ++SRWSL GMTALVTGG++GIG+A VEELA LGA VHTC+R+E +L + L+E
Sbjct: 1 MAKEGGLGENSRWSLGGMTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLRE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ+KGF V+ SVCD +S DQR KL++ V S + GKLNILVNNVGT+I KPT EY+AE++S
Sbjct: 61 WQAKGFQVTTSVCDVSSRDQRVKLMETVSSLYQGKLNILVNNVGTSIFKPTTEYTAEDFS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRN 180
+M TN ES +HL QL +PLLKA IYGATK AMNQL RN
Sbjct: 121 FVMATNLESAFHLSQLAHPLLKASGSGSIVLISSAAGVVHVNVGSIYGATKGAMNQLARN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LACEWA DNIRTNSV PWY T L + +EF + + TP+ RVGE EV+ LVA+L
Sbjct: 181 LACEWASDNIRTNSVCPWYITTPLSNDFFD-EEFKKEAVRTTPMGRVGEANEVSPLVAFL 239
Query: 241 CLPAASYITGQIISVDGGFTANGFN 265
CLP+ASYITGQ I VDGG T NGF+
Sbjct: 240 CLPSASYITGQTICVDGGATVNGFS 264
|
|
| TAIR|locus:2025072 AT1G07440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 154/265 (58%), Positives = 185/265 (69%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA AE +S RWSLK T LVTGGT+GIG A VEE AG GAV+HTC+RNE ELN+CL +
Sbjct: 1 MAGAE---QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK 57
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ KGF V+GSVCDA+ +REKL+Q V S F GKL+IL+NN+G KPT++Y+AE++S
Sbjct: 58 WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS 117
Query: 121 KIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRN 180
++TN ES YHL QL +PLLKA IY ATK A+NQL RN
Sbjct: 118 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARN 177
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LACEWA D IR N+VAP T L E + ++ EF VI+R PL R GEPEEV+SLVA+L
Sbjct: 178 LACEWASDGIRANAVAPAVIATPLAEAVYDD-EFKKVVISRKPLGRFGEPEEVSSLVAFL 236
Query: 241 CLPAASYITGQIISVDGGFTANGFN 265
C+PAASYITGQ I VDGG T NGF+
Sbjct: 237 CMPAASYITGQTICVDGGLTVNGFS 261
|
|
| TAIR|locus:2043052 AT2G29290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 148/254 (58%), Positives = 181/254 (71%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL+GM ALVTGGT+GIG+A VEEL+ LGA VHTC+R+E +L + L+EWQ KGF V+ S
Sbjct: 4 RWSLQGMNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVTTS 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
+CD + +QREKL++ V S F GKLNILVNNVGT + KPT EY+AEE+S +M TN +S +
Sbjct: 64 ICDVSLREQREKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDSAF 123
Query: 132 HLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRNLACEWAKDNIR 191
H+ QL +PLLKA IYGATK AMNQL RNLACEWA DNIR
Sbjct: 124 HISQLAHPLLKASGSGSIVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDNIR 183
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
TN++ PW T L+ LL +E + RTP+ RVGE EV+ LVA+LCLPAASYITGQ
Sbjct: 184 TNAICPWLITTPLISDLLSVEEMKKEAEERTPMGRVGEANEVSPLVAFLCLPAASYITGQ 243
Query: 252 IISVDGGFTANGFN 265
+I VDGG T NGF+
Sbjct: 244 VICVDGGLTVNGFS 257
|
|
| TAIR|locus:2043152 AT2G29370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 153/266 (57%), Positives = 187/266 (70%)
Query: 1 MANAESSFKSS-RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59
MA S + +WSL+GMTALVTGG++G+G+A VEELA LGA VHTC+R+E +L + L+
Sbjct: 1 MAKRGESLRDKPKWSLEGMTALVTGGSKGLGKAVVEELAMLGARVHTCARDETQLQESLR 60
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
EWQ+KG V+ SVCD +S DQREKL++ V S F GKL+ILV NVG + KPT E +AEE+
Sbjct: 61 EWQAKGLQVTTSVCDVSSRDQREKLMETVSSLFQGKLSILVPNVGIGVLKPTTECTAEEF 120
Query: 120 SKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTR 179
S I+ TN EST+H QL +PLLKA IYGATK AMNQL R
Sbjct: 121 SFIIATNLESTFHFSQLAHPLLKASGSGNIVLMSSVAGVVNLGNTSIYGATKGAMNQLAR 180
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
NLACEWA DNIR NSV PW+ T + L +K+ +KV + TPL+RVGE EV+SLVA+
Sbjct: 181 NLACEWASDNIRANSVCPWFITTPSTKDFLGDKDVKEKVESVTPLRRVGEANEVSSLVAF 240
Query: 240 LCLPAASYITGQIISVDGGFTANGFN 265
LCLPAASYITGQ I VDGGFT NGF+
Sbjct: 241 LCLPAASYITGQTICVDGGFTINGFS 266
|
|
| TAIR|locus:2025057 AT1G07450 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 148/255 (58%), Positives = 180/255 (70%)
Query: 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSG 70
+RWSL+GMTALVTGG++GIG A VEEL G GA VH C +E LN+CL W +KGF VSG
Sbjct: 4 NRWSLQGMTALVTGGSKGIGYAIVEELVGFGARVHICDIDETLLNECLSGWHAKGFEVSG 63
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
S+CD +S QR +L+Q V S F KLNIL+NNVG I KPT+E +AE++S +M TN ES
Sbjct: 64 SICDVSSRPQRVQLMQTVSSLFGAKLNILINNVGKYILKPTLESTAEDFSSLMATNLESA 123
Query: 131 YHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRNLACEWAKDNI 190
Y++ QL +PLLKA IYG TK A+NQL R+LACEWA DNI
Sbjct: 124 YYISQLAHPLLKASGNGNIVFISSVTGVVSGTST-IYGVTKGALNQLARDLACEWASDNI 182
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
R NSVAPW T TSLV++ LE++ F + + +RTPL R EP EVASLV +LCLPAASYITG
Sbjct: 183 RANSVAPWVTATSLVQKYLEDEIFAEAMFSRTPLGRACEPREVASLVTFLCLPAASYITG 242
Query: 251 QIISVDGGFTANGFN 265
Q I +DGGFT NGF+
Sbjct: 243 QTICIDGGFTVNGFS 257
|
|
| TAIR|locus:2043037 AT2G29150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 151/266 (56%), Positives = 187/266 (70%)
Query: 1 MANA-ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59
MA A E+S SRWSL+GMTALVTGG++G+G+A VEELA LGA VHTC+R+E +L + L+
Sbjct: 1 MAKAGENSRDKSRWSLEGMTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQERLR 60
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
EWQ+KGF V+ SVCD +S +QREKL++ V S F GKLNILVNN GT I KP+ EY+AE+Y
Sbjct: 61 EWQAKGFEVTTSVCDVSSREQREKLMETVSSVFQGKLNILVNNAGTGIIKPSTEYTAEDY 120
Query: 120 SKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTR 179
S +M TN ES +HL Q+ +PLLKA IYGA+K AMNQL R
Sbjct: 121 SFLMATNLESAFHLSQIAHPLLKASGSGSIVFMSSVAGLVHTGAS-IYGASKGAMNQLGR 179
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
+LACEWA DNIR NSV PW T L + +++ V +TP+ RVGE EV+SLVA+
Sbjct: 180 SLACEWASDNIRVNSVCPWVITTPLTSFIFSDEKLRKAVEDKTPMGRVGEANEVSSLVAF 239
Query: 240 LCLPAASYITGQIISVDGGFTANGFN 265
LC PAASYITGQ I VDGG + NGF+
Sbjct: 240 LCFPAASYITGQTICVDGGASVNGFS 265
|
|
| TAIR|locus:2042992 TRI "tropinone reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 149/254 (58%), Positives = 179/254 (70%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL+G+TALVTGG GIG A VEELAG GA +H C ++ LN+ L EW+ KGF VSGS
Sbjct: 4 RWSLQGLTALVTGGASGIGHAIVEELAGFGAKIHVCDISKTLLNQSLSEWEKKGFQVSGS 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCDA++ +RE L+Q V + F+GKLNILVNNVGT KPTIEY AE++S +++TN ES Y
Sbjct: 64 VCDASNRLERETLMQTVTTIFDGKLNILVNNVGTIRTKPTIEYEAEDFSFLISTNLESAY 123
Query: 132 HLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRNLACEWAKDNIR 191
HL QL +PLLKA IYG TK A+NQL RNLACEWAKD IR
Sbjct: 124 HLSQLSHPLLKASGNGIITFISSAAGIVSFDAASIYGLTKGALNQLARNLACEWAKDGIR 183
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+VAP + T+L + LE+ F + + +RTPL R GEP EVASLVA+LCLPAASYITGQ
Sbjct: 184 ANAVAPNFITTALAKPFLEDAGFNEILSSRTPLGRAGEPREVASLVAFLCLPAASYITGQ 243
Query: 252 IISVDGGFTANGFN 265
I VDGG T NGF+
Sbjct: 244 TICVDGGLTVNGFS 257
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O67610 | FABG_AQUAE | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3522 | 0.8860 | 0.9717 | yes | no |
| Q8WNV7 | DHRS4_PIG | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3427 | 0.9044 | 0.8817 | yes | no |
| Q5HGK2 | FABG_STAAC | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3346 | 0.8529 | 0.9430 | yes | no |
| P16544 | ACT3_STRCO | 1, ., 3, ., 1, ., - | 0.3346 | 0.8676 | 0.9042 | yes | no |
| Q9KQH7 | FABG_VIBCH | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3346 | 0.8823 | 0.9836 | yes | no |
| Q9GKX2 | DHRS4_RABIT | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3385 | 0.9264 | 0.9692 | yes | no |
| Q05528 | KDUD_DICD3 | 1, ., 1, ., 1, ., 1, 2, 7 | 0.3134 | 0.8970 | 0.9644 | yes | no |
| P50162 | TRN1_DATST | 1, ., 1, ., 1, ., 2, 0, 6 | 0.5937 | 0.9264 | 0.9230 | N/A | no |
| P50163 | TRN2_DATST | 1, ., 1, ., 1, ., 2, 3, 6 | 0.5868 | 0.9375 | 0.9807 | N/A | no |
| P50164 | TRN2_HYONI | 1, ., 1, ., 1, ., 2, 3, 6 | 0.5836 | 0.9338 | 0.9769 | N/A | no |
| P50165 | TRNH_DATST | 1, ., 1, ., 1, ., - | 0.5917 | 0.9705 | 0.9850 | N/A | no |
| Q99LB2 | DHRS4_MOUSE | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3464 | 0.9264 | 0.9032 | yes | no |
| Q5RCF8 | DHRS4_PONAB | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3464 | 0.9264 | 0.9064 | yes | no |
| Q9PKF7 | FABG_CHLMU | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3429 | 0.8676 | 0.9516 | yes | no |
| P50199 | GNO_GLUOX | 1, ., 1, ., 1, ., 6, 9 | 0.3505 | 0.8970 | 0.9531 | yes | no |
| Q8SPU8 | DHRS4_BOVIN | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3435 | 0.9227 | 0.8996 | yes | no |
| Q9RPT1 | RHLG_PSEAE | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3333 | 0.9007 | 0.9570 | yes | no |
| P51831 | FABG_BACSU | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3252 | 0.8897 | 0.9837 | yes | no |
| Q8VID1 | DHRS4_RAT | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3244 | 0.9227 | 0.8996 | yes | no |
| P43713 | FABG_HAEIN | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3306 | 0.8786 | 0.9876 | yes | no |
| P38004 | FABG_CHLTR | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3374 | 0.8713 | 0.9556 | yes | no |
| Q9BTZ2 | DHRS4_HUMAN | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3464 | 0.9264 | 0.9064 | yes | no |
| O05919 | Y927C_MYCTU | 1, ., -, ., -, ., - | 0.3293 | 0.9044 | 0.9353 | yes | no |
| P0AEK3 | FABG_SHIFL | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3117 | 0.8860 | 0.9877 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.963 |
| 3rd Layer | 1.5.1.3 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.5.1 | LOW CONFIDENCE prediction! |
| 4th Layer | 1.1.1.269 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 272 | |||
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 1e-150 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 1e-114 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 2e-77 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 1e-68 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-68 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 9e-66 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-65 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-64 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 8e-63 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-62 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 6e-62 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 3e-59 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 3e-58 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 3e-57 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 7e-57 | |
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 4e-55 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 1e-54 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 3e-53 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 5e-52 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 1e-50 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 1e-50 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 6e-50 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 2e-49 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 3e-49 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 3e-49 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 6e-49 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 1e-48 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 3e-48 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 5e-48 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 1e-47 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 2e-47 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 8e-47 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 2e-46 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 8e-46 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 8e-46 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 1e-45 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 2e-45 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 4e-45 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 6e-45 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 1e-44 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 5e-44 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 6e-44 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 5e-43 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 5e-43 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 1e-41 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-41 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 2e-41 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 2e-41 | |
| PRK07523 | 255 | PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro | 8e-41 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 9e-41 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 1e-40 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 2e-40 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 2e-40 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 3e-40 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 2e-39 | |
| cd08945 | 258 | cd08945, PKR_SDR_c, Polyketide ketoreductase, clas | 3e-39 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 4e-39 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 1e-38 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 2e-38 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 3e-38 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 4e-38 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 7e-38 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 7e-38 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 3e-37 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 3e-37 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 7e-37 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 1e-36 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 1e-36 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 2e-36 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 2e-36 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 2e-36 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 2e-36 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 4e-36 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 1e-35 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 1e-35 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 1e-35 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 2e-35 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 2e-35 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 2e-35 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-35 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 4e-35 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 5e-35 | |
| PRK07576 | 264 | PRK07576, PRK07576, short chain dehydrogenase; Pro | 6e-35 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 9e-35 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 2e-34 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 2e-34 | |
| PRK05867 | 253 | PRK05867, PRK05867, short chain dehydrogenase; Pro | 3e-34 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 4e-34 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 4e-34 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 5e-34 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 9e-34 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 1e-33 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 2e-33 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 2e-33 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 2e-33 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-33 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 4e-33 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 6e-33 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 8e-33 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 8e-33 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 8e-33 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 2e-32 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 2e-32 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 3e-32 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 5e-32 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 5e-32 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 8e-32 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 9e-32 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 9e-32 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 1e-31 | |
| PRK08993 | 253 | PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog | 1e-31 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 2e-31 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 4e-31 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 4e-31 | |
| PRK06200 | 263 | PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny | 7e-31 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-30 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 2e-30 | |
| PRK12748 | 256 | PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote | 3e-30 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 5e-30 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 6e-30 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 6e-30 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 7e-30 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 7e-30 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 1e-29 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 3e-29 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 5e-29 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 2e-28 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 2e-28 | |
| cd05361 | 242 | cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de | 2e-28 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 2e-28 | |
| PRK12481 | 251 | PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog | 6e-28 | |
| PRK06057 | 255 | PRK06057, PRK06057, short chain dehydrogenase; Pro | 8e-28 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 9e-28 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 1e-27 | |
| PRK08416 | 260 | PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro | 2e-27 | |
| PRK12938 | 246 | PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro | 2e-27 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 8e-27 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 8e-27 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-26 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 4e-26 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 5e-26 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 9e-26 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 9e-26 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 1e-25 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 2e-25 | |
| PRK12742 | 237 | PRK12742, PRK12742, oxidoreductase; Provisional | 2e-25 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 3e-25 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 3e-25 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 5e-25 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 1e-24 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 1e-24 | |
| cd05328 | 250 | cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de | 1e-24 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 2e-24 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 2e-24 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 3e-24 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 3e-24 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 4e-24 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 6e-24 | |
| PRK12859 | 256 | PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote | 7e-24 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 3e-23 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 3e-23 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 7e-23 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 8e-23 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 1e-22 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 2e-22 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 2e-22 | |
| PRK08339 | 263 | PRK08339, PRK08339, short chain dehydrogenase; Pro | 6e-22 | |
| cd05372 | 250 | cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) | 1e-21 | |
| PRK07041 | 230 | PRK07041, PRK07041, short chain dehydrogenase; Pro | 2e-21 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 3e-21 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 4e-21 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 4e-21 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 4e-21 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 4e-21 | |
| PRK12384 | 259 | PRK12384, PRK12384, sorbitol-6-phosphate dehydroge | 2e-20 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 2e-20 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 5e-20 | |
| PRK05786 | 238 | PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-20 | |
| COG0623 | 259 | COG0623, FabI, Enoyl-[acyl-carrier-protein] | 8e-20 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 9e-20 | |
| cd05353 | 250 | cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)- | 9e-20 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 9e-20 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 1e-19 | |
| PRK07792 | 306 | PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-19 | |
| PRK07533 | 258 | PRK07533, PRK07533, enoyl-(acyl carrier protein) r | 7e-19 | |
| PRK05717 | 255 | PRK05717, PRK05717, oxidoreductase; Validated | 1e-18 | |
| PRK07370 | 258 | PRK07370, PRK07370, enoyl-(acyl carrier protein) r | 2e-18 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 2e-18 | |
| PRK08340 | 259 | PRK08340, PRK08340, glucose-1-dehydrogenase; Provi | 4e-18 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 5e-18 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 6e-18 | |
| cd05360 | 233 | cd05360, SDR_c3, classical (c) SDR, subgroup 3 | 7e-17 | |
| PRK08261 | 450 | PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) | 7e-17 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 8e-17 | |
| TIGR03325 | 262 | TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3- | 1e-16 | |
| PRK12744 | 257 | PRK12744, PRK12744, short chain dehydrogenase; Pro | 1e-16 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 2e-16 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 2e-16 | |
| PRK09134 | 258 | PRK09134, PRK09134, short chain dehydrogenase; Pro | 4e-16 | |
| PRK08945 | 247 | PRK08945, PRK08945, putative oxoacyl-(acyl carrier | 4e-16 | |
| cd05322 | 257 | cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy | 5e-16 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 7e-16 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 4e-15 | |
| PRK06483 | 236 | PRK06483, PRK06483, dihydromonapterin reductase; P | 2e-14 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 3e-14 | |
| PRK05876 | 275 | PRK05876, PRK05876, short chain dehydrogenase; Pro | 3e-14 | |
| PRK12428 | 241 | PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro | 1e-13 | |
| TIGR02685 | 267 | TIGR02685, pter_reduc_Leis, pteridine reductase | 1e-13 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 5e-13 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 8e-13 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 2e-12 | |
| PRK07102 | 243 | PRK07102, PRK07102, short chain dehydrogenase; Pro | 3e-12 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 4e-12 | |
| PRK08017 | 256 | PRK08017, PRK08017, oxidoreductase; Provisional | 4e-12 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 8e-12 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 1e-11 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 1e-11 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 1e-11 | |
| PRK07832 | 272 | PRK07832, PRK07832, short chain dehydrogenase; Pro | 2e-11 | |
| PRK06940 | 275 | PRK06940, PRK06940, short chain dehydrogenase; Pro | 3e-11 | |
| PRK06300 | 299 | PRK06300, PRK06300, enoyl-(acyl carrier protein) r | 3e-11 | |
| PRK07109 | 334 | PRK07109, PRK07109, short chain dehydrogenase; Pro | 4e-11 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 4e-11 | |
| PLN02730 | 303 | PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r | 5e-11 | |
| PRK08690 | 261 | PRK08690, PRK08690, enoyl-(acyl carrier protein) r | 6e-11 | |
| PRK08415 | 274 | PRK08415, PRK08415, enoyl-(acyl carrier protein) r | 7e-11 | |
| PRK08594 | 257 | PRK08594, PRK08594, enoyl-(acyl carrier protein) r | 2e-10 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 5e-10 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 6e-10 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 1e-09 | |
| cd05334 | 221 | cd05334, DHPR_SDR_c_like, dihydropteridine reducta | 1e-09 | |
| PRK06139 | 330 | PRK06139, PRK06139, short chain dehydrogenase; Pro | 2e-09 | |
| cd05373 | 238 | cd05373, SDR_c10, classical (c) SDR, subgroup 10 | 2e-09 | |
| PRK07806 | 248 | PRK07806, PRK07806, short chain dehydrogenase; Pro | 2e-09 | |
| PRK06079 | 252 | PRK06079, PRK06079, enoyl-(acyl carrier protein) r | 4e-09 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 1e-08 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 1e-08 | |
| PLN02780 | 320 | PLN02780, PLN02780, ketoreductase/ oxidoreductase | 1e-08 | |
| cd09808 | 255 | cd09808, DHRS-12_like_SDR_c-like, human dehydrogen | 2e-08 | |
| PRK08278 | 273 | PRK08278, PRK08278, short chain dehydrogenase; Pro | 3e-08 | |
| PRK09291 | 257 | PRK09291, PRK09291, short chain dehydrogenase; Pro | 3e-08 | |
| PRK06997 | 260 | PRK06997, PRK06997, enoyl-(acyl carrier protein) r | 4e-08 | |
| cd11731 | 198 | cd11731, Lin1944_like_SDR_c, Lin1944 and related p | 5e-08 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 5e-08 | |
| cd11730 | 206 | cd11730, Tthb094_like_SDR_c, Tthb094 and related p | 6e-08 | |
| PRK07984 | 262 | PRK07984, PRK07984, enoyl-(acyl carrier protein) r | 8e-08 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 1e-07 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 1e-07 | |
| TIGR01500 | 256 | TIGR01500, sepiapter_red, sepiapterin reductase | 2e-07 | |
| PRK08177 | 225 | PRK08177, PRK08177, short chain dehydrogenase; Pro | 2e-07 | |
| cd09762 | 243 | cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro | 3e-07 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 3e-07 | |
| PRK06603 | 260 | PRK06603, PRK06603, enoyl-(acyl carrier protein) r | 5e-07 | |
| PRK09009 | 235 | PRK09009, PRK09009, C factor cell-cell signaling p | 5e-07 | |
| PRK05884 | 223 | PRK05884, PRK05884, short chain dehydrogenase; Pro | 8e-07 | |
| PRK08159 | 272 | PRK08159, PRK08159, enoyl-(acyl carrier protein) r | 2e-06 | |
| PRK06953 | 222 | PRK06953, PRK06953, short chain dehydrogenase; Pro | 3e-06 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 3e-06 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 6e-06 | |
| PRK07889 | 256 | PRK07889, PRK07889, enoyl-(acyl carrier protein) r | 9e-06 | |
| PRK07023 | 243 | PRK07023, PRK07023, short chain dehydrogenase; Pro | 1e-05 | |
| PRK06196 | 315 | PRK06196, PRK06196, oxidoreductase; Provisional | 2e-05 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 3e-05 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 3e-05 | |
| PRK06101 | 240 | PRK06101, PRK06101, short chain dehydrogenase; Pro | 5e-05 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 9e-05 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 2e-04 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 4e-04 | |
| cd05274 | 375 | cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt | 4e-04 | |
| PRK08303 | 305 | PRK08303, PRK08303, short chain dehydrogenase; Pro | 9e-04 | |
| PRK06505 | 271 | PRK06505, PRK06505, enoyl-(acyl carrier protein) r | 0.001 | |
| PRK05993 | 277 | PRK05993, PRK05993, short chain dehydrogenase; Pro | 0.001 | |
| PRK07453 | 322 | PRK07453, PRK07453, protochlorophyllide oxidoreduc | 0.002 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 0.004 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 420 bits (1082), Expect = e-150
Identities = 171/251 (68%), Positives = 207/251 (82%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RW+L+G TALVTGGT+GIG A VEELAGLGA V+TC+RN+ EL++CL EW+ KGF V GS
Sbjct: 1 RWNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGS 60
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCD +S +R++L+ V S F GKLNILVNN GTNIRK +Y+ E+YS IM+TNFE+ Y
Sbjct: 61 VCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAY 120
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL +L +PLLKASG G+IVFISSV G+ V SG+ YGATK A+NQLTR+LACEWAKDNIR
Sbjct: 121 HLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIR 180
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+VAPW T LVE +++ KE +DKVI RTPL+R GEPEEVA+LVA+LC+PAASYITGQ
Sbjct: 181 VNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAFLCMPAASYITGQ 240
Query: 252 IISVDGGFTAN 262
II+VDGG TAN
Sbjct: 241 IIAVDGGLTAN 251
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 327 bits (841), Expect = e-114
Identities = 124/257 (48%), Positives = 164/257 (63%), Gaps = 3/257 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFV 67
RW L G TAL+TG ++GIG A E GLGA V +R+ L + E +
Sbjct: 2 QHRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPERE 61
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
V G D + + R ++ V ++G L+ILVNN G NIRK I+Y+ +E+ I TN
Sbjct: 62 VHGLAADVSDDEDRRAILDWVEDHWDG-LHILVNNAGGNIRKAAIDYTEDEWRGIFETNL 120
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S + L + +PLLK +IV I SV GL+HV SG+ YG TKAA+ Q+TRNLA EWA+
Sbjct: 121 FSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAE 180
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
D IR N+VAPWY +T L L + ++ ++VI RTP++RVGEPEEVA+ VA+LC+PAASY
Sbjct: 181 DGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASY 240
Query: 248 ITGQIISVDGGFTANGF 264
ITGQ I+VDGGF GF
Sbjct: 241 ITGQCIAVDGGFLRYGF 257
|
Length = 257 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 2e-77
Identities = 92/237 (38%), Positives = 128/237 (54%), Gaps = 3/237 (1%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
ALVTG + GIG+A LA GA V RNE L + L ++ G D + +
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAE-LAAIEALGGNAVAVQADVSDEE 59
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
E L++E +F G+L+ILVNN G P E + E++ +++ N + L + P
Sbjct: 60 DVEALVEEALEEF-GRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWY 199
+K G G IV ISSV GL + + Y A+KAA+ LTR+LA E A IR N+VAP
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178
Query: 200 TKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVD 256
T ++ +L + ++ A PL R+G PEEVA V +L ASYITGQ+I VD
Sbjct: 179 VDTPMLAKLGPEEAE-KELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 1e-68
Identities = 93/254 (36%), Positives = 126/254 (49%), Gaps = 11/254 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFV-VSG 70
L G ALVTG + GIG+A LA GA VV E + G +
Sbjct: 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61
Query: 71 SVCD-AASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFE 128
D + + E L+ +F G+++ILVNN G P E + E++ +++ N
Sbjct: 62 VAADVSDDEESVEALVAAAEEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ L + PL+K IV ISSV GL + Y A+KAA+ LT+ LA E A
Sbjct: 121 GAFLLTRAALPLMKK---QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPR 177
Query: 189 NIRTNSVAPWYTKTSLVERLLEN-KEFVDKVIARTPLQRVGEPEEVASLVAYLCLP-AAS 246
IR N+VAP Y T + L E + ++ AR PL R+G PEEVA+ VA+L AAS
Sbjct: 178 GIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAAS 237
Query: 247 YITGQIISVDGGFT 260
YITGQ + VDGG
Sbjct: 238 YITGQTLPVDGGLL 251
|
Length = 251 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 210 bits (538), Expect = 4e-68
Identities = 92/247 (37%), Positives = 129/247 (52%), Gaps = 7/247 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL+G TALVTG +RGIG+A LA GA V NE E ++ G V
Sbjct: 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + LI+ F G L+ILVNN G S E++ +++ N T+++
Sbjct: 62 DVSDEAAVRALIEAAVEAF-GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNV 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIR 191
+ P + + G IV ISSV G+ G+ + Y A KA + T+ LA E A I
Sbjct: 121 VRAALPPMIKARYGRIVNISSVSGV--TGNPGQTNYSAAKAGVIGFTKALALELASRGIT 178
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+VAP + T + E L +E +++ PL R+G+PEEVA+ VA+L AASYITGQ
Sbjct: 179 VNAVAPGFIDTDMTEGL--PEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQ 236
Query: 252 IISVDGG 258
+I V+GG
Sbjct: 237 VIPVNGG 243
|
Length = 246 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 9e-66
Identities = 84/251 (33%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G A+VTG + GIG+ A GA V RNE + E + G D
Sbjct: 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAAD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHL 133
+ E + +F G ++ILVNN GT R P ++ E+ +I N +S Y
Sbjct: 62 VSDEADVEAAVAAALERF-GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q P ++ G G+IV ++S GL Y A+K A+ LT+ LA E D IR N
Sbjct: 121 TQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVN 180
Query: 194 SVAPWYTKTSLVERLLE--NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
+VAP +T L+E + E K +A PL R+G PE++A+ +L AS+ITG
Sbjct: 181 AVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGV 240
Query: 252 IISVDGGFTAN 262
+ VDGG
Sbjct: 241 TLVVDGGRCVG 251
|
Length = 251 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 203 bits (520), Expect = 3e-65
Identities = 85/250 (34%), Positives = 134/250 (53%), Gaps = 4/250 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
SL+G ALVTG +RGIG+A E LA GA VV + +E + E + G
Sbjct: 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + E+ + E ++F G ++ILVNN G + E++ +++ TN ++
Sbjct: 62 GDVSDAESVERAVDEAKAEF-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L + V + G I+ ISSV GL + Y A+KA + T++LA E A I
Sbjct: 121 LTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITV 180
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N+VAP + +T + + L ++ + ++A+ PL R+G+PEE+AS VA+L A+YITGQ
Sbjct: 181 NAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQT 238
Query: 253 ISVDGGFTAN 262
+ V+GG
Sbjct: 239 LHVNGGMVMG 248
|
Length = 248 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 200 bits (512), Expect = 3e-64
Identities = 92/249 (36%), Positives = 132/249 (53%), Gaps = 6/249 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G A+VTG + GIG+A E LA GA VV NE + L+E + +G
Sbjct: 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D +S + E L++++ KF GK++ILVNN G + + + EE+ +++ N L
Sbjct: 63 DVSSEEDVENLVEQIVEKF-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLL 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P + G IV ISS+ GL +Y A+K A+N T+ LA E A IR N
Sbjct: 122 TRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVN 181
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIART-PLQRVGEPEEVASLVAYLCLPAASYITGQI 252
+VAP T + E + +A PL R+G+PEE+A +V +L ASYITGQI
Sbjct: 182 AVAPGAIDTEMWSSFSEEDKE---GLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQI 238
Query: 253 ISVDGGFTA 261
I+VDGG+T
Sbjct: 239 ITVDGGWTC 247
|
Length = 247 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 8e-63
Identities = 85/250 (34%), Positives = 114/250 (45%), Gaps = 3/250 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L+G ALVTG RGIG+A LA GA V + + ++ G
Sbjct: 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQV 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + + F G+L+ILV N G P E E++ +++ N T+ L
Sbjct: 63 DVRDRAALKAAVAAGVEDF-GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLL 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIRT 192
Q P L +G G IV SSV G G Y A+KA + TR LA E A NI
Sbjct: 122 TQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITV 181
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
NSV P T + L + + + A PL R+GEPE++A+ V +L A YITGQ
Sbjct: 182 NSVHPGGVDTPMAGNLGDAQWAEA-IAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQT 240
Query: 253 ISVDGGFTAN 262
+ VDGG T
Sbjct: 241 LPVDGGATLP 250
|
Length = 251 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 1e-62
Identities = 90/246 (36%), Positives = 123/246 (50%), Gaps = 4/246 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
SL G ALVTG RG+G+A LA GA VV +E + ++ ++ G
Sbjct: 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D E + +F G+++ILVNN G KP + S +E+ +++ N +H
Sbjct: 63 ADVTDKAALEAAVAAAVERF-GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFH 121
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L + V P ++ G IV ISSV GL S Y A KA + LT+ LA E A+ I
Sbjct: 122 LLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITV 181
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N VAP T + E +E A TPL R G PE++A VA+LC A+ YITGQ+
Sbjct: 182 NMVAPGDIDTDMKEATIEEAREAKD--AETPLGRSGTPEDIARAVAFLCSDASDYITGQV 239
Query: 253 ISVDGG 258
I V GG
Sbjct: 240 IEVTGG 245
|
Length = 249 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 6e-62
Identities = 86/250 (34%), Positives = 133/250 (53%), Gaps = 5/250 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLKG ALVTG +RGIG LA GA + SRNE + + + + +G + C
Sbjct: 2 SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTC 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + + + ++ + F GK++ILVNN G R P E+ E+ ++ N + +
Sbjct: 62 DVSDEEAIKAAVEAIEEDF-GKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFV 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNIR 191
Q V + G G I+ I S+ LS +G + Y A+K + LT+ LA EWA+ I+
Sbjct: 121 SQAVARHMIKQGHGKIINICSL--LSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQ 178
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N++AP Y T + E ++ + EF D ++ R P R G+PE++ +L A+ Y+ GQ
Sbjct: 179 VNAIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVGAAVFLASDASDYVNGQ 238
Query: 252 IISVDGGFTA 261
II VDGG+ A
Sbjct: 239 IIFVDGGWLA 248
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 187 bits (478), Expect = 3e-59
Identities = 88/241 (36%), Positives = 138/241 (57%), Gaps = 6/241 (2%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG +RGIG+A +LA GA V+ T +E + ++E ++ G G VCD +
Sbjct: 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV- 137
+ + +++E+ + G ++ILVNN G + E++ ++ TN ++L Q V
Sbjct: 61 EDVKAVVEEIEEEL-GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVL 119
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
++K G I+ ISSV GL + Y A+KA + T++LA E A NI N+VAP
Sbjct: 120 RIMIKQRS-GRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAP 178
Query: 198 WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDG 257
+ T + ++L +++ K++++ PL R G PEEVA+ VA+L ASYITGQ+I VDG
Sbjct: 179 GFIDTDMTDKL--SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDG 236
Query: 258 G 258
G
Sbjct: 237 G 237
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 185 bits (473), Expect = 3e-58
Identities = 92/253 (36%), Positives = 130/253 (51%), Gaps = 10/253 (3%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G ALVT + GIG A LA GA V C+RN L + E ++ G V V D
Sbjct: 1 GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
P+ ++L+++ G F G+++ILVNN G P E + E++ + S + +
Sbjct: 61 DPEDIDRLVEKAGDAF-GRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
V P +K G G IV ISS+ + + +A + L + L+ E A D + NSV
Sbjct: 120 VLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVL 179
Query: 197 PWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
P Y T V RLLE +E +V ++ PL RVG+PEE+A+L+A+L ASY
Sbjct: 180 PGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEKASY 239
Query: 248 ITGQIISVDGGFT 260
ITGQ I VDGG T
Sbjct: 240 ITGQAILVDGGLT 252
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 182 bits (465), Expect = 3e-57
Identities = 84/244 (34%), Positives = 133/244 (54%), Gaps = 11/244 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG +RGIG+A LA GA V R+E + ++E ++ G + D +
Sbjct: 2 VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ E L+++V ++F G ++ILVNN G + S E++ ++ N +++ Q V
Sbjct: 62 EAVEALVEKVEAEF-GPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAVI 120
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ G I+ ISSV GL G+ Y A+KA + T++LA E A I N+
Sbjct: 121 RAMIKRRSGRIINISSVVGLI----GNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
VAP + T + + L ++ +K++ + PL R+G PEEVA+ VA+L ASYITGQ++
Sbjct: 177 VAPGFIDTDMTDAL--PEKVKEKILKQIPLGRLGTPEEVANAVAFLASDDASYITGQVLH 234
Query: 255 VDGG 258
V+GG
Sbjct: 235 VNGG 238
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 7e-57
Identities = 87/257 (33%), Positives = 128/257 (49%), Gaps = 14/257 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G+ LVTGG GIG+A E A GA VH C +E L G V+ +V
Sbjct: 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR--LPGAKVTATVA 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFESTYH 132
D A P Q E++ +F G L++LVNN G I+ + E++ + + N ++
Sbjct: 66 DVADPAQVERVFDTAVERF-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124
Query: 133 LCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ PLLKASG G I+ +SSV G + Y A+K A+ L ++LA E IR
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184
Query: 192 TNSVAPWYTKTSLVERLLENK---------EFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
N++ P + + R++E + E + + + L R+ EPE++A+ +L
Sbjct: 185 VNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLAS 244
Query: 243 PAASYITGQIISVDGGF 259
PAA YITGQ ISVDG
Sbjct: 245 PAARYITGQAISVDGNV 261
|
Length = 264 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 4e-55
Identities = 87/253 (34%), Positives = 122/253 (48%), Gaps = 16/253 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVC 73
LKG A +TGG GIG+A + A LGA V R L +E S C
Sbjct: 1 LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D P+ E + E +F GK++IL+NN N P S + ++ + T++
Sbjct: 61 DVRDPEAVEAAVDETLKEF-GKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNT 119
Query: 134 CQLVYP-LLKASGVGSIVFISS------VGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
+ V L++A GSI+ IS+ H A KA ++ LTR+LA EW
Sbjct: 120 TKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSA------AAKAGVDALTRSLAVEWG 173
Query: 187 KDNIRTNSVAP-WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
IR N++AP T +ERL + + K+I R PL R+G PEE+A+L +L AA
Sbjct: 174 PYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSDAA 233
Query: 246 SYITGQIISVDGG 258
SYI G + VDGG
Sbjct: 234 SYINGTTLVVDGG 246
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 1e-54
Identities = 86/252 (34%), Positives = 126/252 (50%), Gaps = 8/252 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G TALVTGG+RG+G E L GA V +R EL + ++ G D
Sbjct: 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAAD 69
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A E+L +E +F G ++ILVNN G P ++ E + K+M N + L
Sbjct: 70 VADEADIERLAEETLERF-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLS 128
Query: 135 QLVYPL-LKASGVGSIVFISSVGGL--SHVGS-GSI-YGATKAAMNQLTRNLACEWAKDN 189
Q V + G G I+ ++SV GL + +I Y +K A+ TR LA EW
Sbjct: 129 QAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHG 188
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
IR N++AP + T + LE + ++A TPL R+G+ E++ L A+ +IT
Sbjct: 189 IRVNAIAPGFFPTKMTRGTLERLG--EDLLAHTPLGRLGDDEDLKGAALLLASDASKHIT 246
Query: 250 GQIISVDGGFTA 261
GQI++VDGG +A
Sbjct: 247 GQILAVDGGVSA 258
|
Length = 259 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 3e-53
Identities = 82/253 (32%), Positives = 122/253 (48%), Gaps = 3/253 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
R+SL G ALVTG RG+G LAG GA V RN L + ++ G
Sbjct: 4 LQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAE 63
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D A + + +G+L+ILVNNVG R+P E ++ T+ +
Sbjct: 64 ALAFDIADEEAVAAAFARID-AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVA 122
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
L +L +K G G I+ I+S+ G ++ G ++Y A K + L R LA E+
Sbjct: 123 PILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGD-AVYPAAKQGLTGLMRALAAEFGPH 181
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
I +N++AP Y T + + + RTPL R G PEE+A +L PAASY+
Sbjct: 182 GITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYV 241
Query: 249 TGQIISVDGGFTA 261
G +++VDGG++
Sbjct: 242 NGHVLAVDGGYSV 254
|
Length = 256 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 170 bits (432), Expect = 5e-52
Identities = 89/258 (34%), Positives = 134/258 (51%), Gaps = 20/258 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
SLKG A+VTGG+RGIG A LA GA V + + +E K G
Sbjct: 5 SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD +S + EK +++ F GK++IL+ N G + KP ++Y+ E+++K++ N ++
Sbjct: 65 CDVSSQESVEKTFKQIQKDF-GKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFN 123
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI---------YGATKAAMNQLTRNLAC 183
Q + K G GS++ +S+ SG+I Y A+KAA+ L ++LA
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASM-------SGTIVNRPQPQAAYNASKAAVIHLAKSLAV 176
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
EWAK IR NS++P Y T L +KE K + PL+R+ PEE+ YL
Sbjct: 177 EWAKYFIRVNSISPGYIDTDLT--DFVDKELRKKWESYIPLKRIALPEELVGAYLYLASD 234
Query: 244 AASYITGQIISVDGGFTA 261
A+SY TG + +DGG+T
Sbjct: 235 ASSYTTGSDLIIDGGYTC 252
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 1e-50
Identities = 84/245 (34%), Positives = 123/245 (50%), Gaps = 8/245 (3%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDA 75
ALVTGG+RGIG+A LA GA VV +++ + E + G VV V
Sbjct: 1 ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADV--- 57
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+ P E++ V +F G+L++LV+N +P E + + M TN ++ H Q
Sbjct: 58 SQPQDVEEMFAAVKERF-GRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQ 116
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L++ G G IV ISS+G + + + G KAA+ L R LA E IR N+V
Sbjct: 117 QAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAV 176
Query: 196 APWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255
+P T + ++ ++ A TP RVG P++VA V +LC AA ITGQ + V
Sbjct: 177 SPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAARMITGQTLVV 236
Query: 256 DGGFT 260
DGG +
Sbjct: 237 DGGLS 241
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 1e-50
Identities = 87/256 (33%), Positives = 131/256 (51%), Gaps = 18/256 (7%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHT----CSRNEVELNKCLKEWQSKGFVV 68
SL L+TGG+ G+G+A LA GA V R E + ++ G
Sbjct: 2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKA 61
Query: 69 SGSVCD----AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMT 124
G D AA+ + ++E G+L+ILVNN G E S EE+ ++
Sbjct: 62 LGLAFDVRDFAATRAALDAGVEE-----FGRLDILVNNAGIATDAAFAELSIEEWDDVID 116
Query: 125 TNFESTYHLCQ-LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
N + +++ Q + P+++A G IV I+SV G+ Y A+KA + LT+ LA
Sbjct: 117 VNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLAN 176
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
E A I N+VAP ++ + +N + ++ P+QR+GEP+EVA+LVA+L
Sbjct: 177 ELAPRGITVNAVAP----GAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSD 232
Query: 244 AASYITGQIISVDGGF 259
AASY+TGQ+I VDGGF
Sbjct: 233 AASYVTGQVIPVDGGF 248
|
Length = 249 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 6e-50
Identities = 77/252 (30%), Positives = 115/252 (45%), Gaps = 8/252 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L G ALVTG RG+G A E LA GA V E + ++ G
Sbjct: 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A P ++ + G L+ LVNN G K E + + +M N T+ +
Sbjct: 64 DLADPASVQRFFDAAAAAL-GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLM 122
Query: 134 CQLVYPLLKASGVGSIVFISS--VG-GLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ P L+ SG G IV ++S G +G+ Y A+K A+ +TR+LA E I
Sbjct: 123 LRAALPHLRDSGRGRIVNLASDTALWGAPKLGA---YVASKGAVIGMTRSLARELGGRGI 179
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
N++AP T T + E + L+R+ P++VA V +L AA ++TG
Sbjct: 180 TVNAIAPGLTATEATAYV-PADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTG 238
Query: 251 QIISVDGGFTAN 262
Q++ V+GGF N
Sbjct: 239 QLLPVNGGFVMN 250
|
Length = 250 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 2e-49
Identities = 88/252 (34%), Positives = 130/252 (51%), Gaps = 5/252 (1%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
R+ L A+VTG RG+G A A GA V +R E +L++ ++ ++ G
Sbjct: 5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVV 64
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D A P+ L + F G+L+I+VNNVG + P + S ++ + T N + +
Sbjct: 65 AADLAHPEATAGLAGQAVEAF-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAH 123
Query: 132 HLCQLVYPL-LKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDN 189
L PL L+ SG GS++ ISS G G G YG KAA+ TR A +
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMG-RLAGRGFAAYGTAKAALAHYTRLAALDLCP-R 181
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
IR N++AP TS +E + N E + TPL+R+G+PE++A+ YL PA SY+T
Sbjct: 182 IRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLT 241
Query: 250 GQIISVDGGFTA 261
G+ + VDGG T
Sbjct: 242 GKTLEVDGGLTF 253
|
Length = 263 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 3e-49
Identities = 81/251 (32%), Positives = 119/251 (47%), Gaps = 7/251 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
LKG A+VTGG RG+G A L GA V + E E
Sbjct: 2 RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFH---L 58
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D D ++ F G+L++LVNN G + EE+ +++ N +
Sbjct: 59 DVTDEDGWTAVVDTAREAF-GRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLG 117
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK--DNIR 191
+ V P +K +G GSI+ +SS+ GL + + Y A+K A+ LT++ A E A IR
Sbjct: 118 TRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIR 177
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
NSV P Y T + + LL + + TP+ R GEP+E+A V YL +S++TG
Sbjct: 178 VNSVHPGYIYTPMTDELLIAQGEMG-NYPNTPMGRAGEPDEIAYAVVYLASDESSFVTGS 236
Query: 252 IISVDGGFTAN 262
+ VDGG+TA
Sbjct: 237 ELVVDGGYTAG 247
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 3e-49
Identities = 83/250 (33%), Positives = 125/250 (50%), Gaps = 11/250 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV--ELNKCLKEWQSKGFVVSG 70
L G ALVTG +RGIG+A + LA GA VV+ S E+ ++ K V
Sbjct: 1 LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D + P Q +L F G ++ILVNN G ++KP E S EE+ ++ T N +
Sbjct: 61 ---DVSDPSQVARLFDAAEKAF-GGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGA 116
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ + Q L+ G I+ ISS ++ + Y +KAA+ TR LA E I
Sbjct: 117 FFVLQEAAKRLRDGG--RIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGI 174
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
N+VAP T + + +E V+ +PL R+GEPE++A +VA+L P ++ G
Sbjct: 175 TVNAVAPGPVDTDMFYAG-KTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLASPDGRWVNG 233
Query: 251 QIISVDGGFT 260
Q+I +GG+
Sbjct: 234 QVIRANGGYV 243
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 162 bits (411), Expect = 6e-49
Identities = 88/248 (35%), Positives = 130/248 (52%), Gaps = 2/248 (0%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
R L ALVT T GIG A LA GA V SR + +++ + Q +G V+G+
Sbjct: 5 RDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGT 64
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE-YSKIMTTNFEST 130
VC + RE+L+ +G ++ILV+N N I S EE + KI+ N ++T
Sbjct: 65 VCHVGKAEDRERLV-ATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKAT 123
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ + V P ++ G GS+V +SSV Y +K A+ LT+NLA E A NI
Sbjct: 124 ALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRNI 183
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
R N +AP KTS L +K + + ++R+G+PE+ A +V++LC ASYITG
Sbjct: 184 RVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSEDASYITG 243
Query: 251 QIISVDGG 258
+ + V GG
Sbjct: 244 ETVVVGGG 251
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 1e-48
Identities = 90/256 (35%), Positives = 138/256 (53%), Gaps = 8/256 (3%)
Query: 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG 65
F +SL G A+VTGG G+GQ LA GA ++ T + + L E +G
Sbjct: 5 KFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIE--KEG 62
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT 125
V+ D P+ EK+++E +F GK++ILVNN GT R P +EY E+++ +M
Sbjct: 63 RKVTFVQVDLTKPESAEKVVKEALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDI 121
Query: 126 NFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLAC 183
N S YHL Q V ++ G G I+ I+S+ LS G + Y A+K + LT+ A
Sbjct: 122 NLNSVYHLSQAVAKVMAKQGSGKIINIASM--LSFQGGKFVPAYTASKHGVAGLTKAFAN 179
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
E A NI+ N++AP Y KT+ + +K D+++ R P R GEP+++ +L
Sbjct: 180 ELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASR 239
Query: 244 AASYITGQIISVDGGF 259
A+ Y+ G I++VDGG+
Sbjct: 240 ASDYVNGHILAVDGGW 255
|
Length = 258 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 3e-48
Identities = 85/249 (34%), Positives = 125/249 (50%), Gaps = 18/249 (7%)
Query: 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQS-KGF------VVSG 70
ALVTG RGIG A EL G V+ T N C K+W GF +
Sbjct: 4 IALVTGAKRGIGSAIARELLNDGYRVIATYFSG----NDCAKDWFEEYGFTEDQVRLKEL 59
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
V D + I+E G ++ILVNN G S +E++ ++ TN S
Sbjct: 60 DVTDTEECAEALAEIEEE----EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSV 115
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+++ Q ++ + G G I+ ISSV GL + Y A KA M T+ LA E A+ I
Sbjct: 116 FNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGI 175
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
N +AP Y T +VE++ E + ++ + P++R+G PEE+A+ VA+L AA +ITG
Sbjct: 176 TVNCIAPGYIATPMVEQMGP--EVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITG 233
Query: 251 QIISVDGGF 259
+ IS++GG
Sbjct: 234 ETISINGGL 242
|
Length = 245 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 5e-48
Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 13/253 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK----CLKEWQSKGFVVSG 70
L G A++TG + GIG T A LGA + R+ L + CL+ S+ ++
Sbjct: 1 LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILL- 59
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
V D + ++++I +KF G+L+ILVNN G + + EEY K+M N +
Sbjct: 60 VVADLTEEEGQDRIISTTLAKF-GRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAV 118
Query: 131 YHLCQLVYPLLKASGVGSIVFISSV-GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+L +L P L + G IV +SSV GG S G Y +KAA++Q TR A E A
Sbjct: 119 IYLTKLAVPHLIKTK-GEIVNVSSVAGGRSFPGVLY-YCISKAALDQFTRCTALELAPKG 176
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIART----PLQRVGEPEEVASLVAYLCLPAA 245
+R NSV+P T R+ +E K ++R PL R G +EVA +A+L A+
Sbjct: 177 VRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDAS 236
Query: 246 SYITGQIISVDGG 258
S+ITGQ++ VDGG
Sbjct: 237 SFITGQLLPVDGG 249
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 1e-47
Identities = 91/255 (35%), Positives = 129/255 (50%), Gaps = 15/255 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC---LKEWQSKGFVVSGS 71
G ALVTGG GIG+AT A GA V R+ + ++E + V+
Sbjct: 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVA-- 62
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT-IEYSAEEYSKIMTTNFEST 130
CD + + L+++ + + G+L+ NN G I + E S E+ IM N +
Sbjct: 63 -CDVTRDAEVKALVEQTIAAY-GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGV 120
Query: 131 YHLC---QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+ LC Q+ PL+ A G G+IV +SV GL SIY A+K A+ LT++ A E+AK
Sbjct: 121 W-LCMKYQI--PLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAK 177
Query: 188 DNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
IR N+V P T + R E + + A P+ R+G+ EEVAS V YLC AS
Sbjct: 178 KGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGAS 237
Query: 247 YITGQIISVDGGFTA 261
+ TG + VDGG TA
Sbjct: 238 FTTGHALMVDGGATA 252
|
Length = 253 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 2e-47
Identities = 81/263 (30%), Positives = 137/263 (52%), Gaps = 11/263 (4%)
Query: 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV 67
+ +SLKG AL+TG + GIG A + A GA + N+ ++K L ++ G
Sbjct: 1 MSENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIE 60
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
G VCD D + ++ ++ + G ++ILVNN G R P +E SAE++ +++ +
Sbjct: 61 AHGYVCDVTDEDGVQAMVSQIEKEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDL 119
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEW 185
+ + + + V P + G G I+ I S+ +S +G + S Y A K + LT+N+A E+
Sbjct: 120 NAPFIVSKAVIPSMIKKGHGKIINICSM--MSELGRETVSAYAAAKGGLKMLTKNIASEY 177
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDK------VIARTPLQRVGEPEEVASLVAY 239
+ NI+ N + P Y T L E + + +IA+TP R G+PE++A +
Sbjct: 178 GEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVF 237
Query: 240 LCLPAASYITGQIISVDGGFTAN 262
L A++++ G I+ VDGG A
Sbjct: 238 LASDASNFVNGHILYVDGGILAY 260
|
Length = 265 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 8e-47
Identities = 79/260 (30%), Positives = 116/260 (44%), Gaps = 15/260 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LKG ALVTG GIG LA GA V N+ + Q G G D
Sbjct: 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ I F G ++ILVNN G P ++ E++ K++ + +
Sbjct: 62 VTDEEAINAGIDYAVETF-GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTT 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ P++KA G G I+ ++SV G VGS + Y + K + LT+ +A E A +
Sbjct: 121 KAALPIMKAQGGGRIINMASVHG--LVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTV 178
Query: 193 NSVAPWYTKTSLV---------ERLLENKEFVDKVIAR-TPLQRVGEPEEVASLVAYLCL 242
N++ P Y T LV ER + +E ++ V+ P +R EE+A +L
Sbjct: 179 NAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLAS 238
Query: 243 PAASYITGQIISVDGGFTAN 262
AA +TGQ VDGG+TA
Sbjct: 239 FAAKGVTGQAWVVDGGWTAQ 258
|
Length = 258 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 2e-46
Identities = 81/251 (32%), Positives = 129/251 (51%), Gaps = 7/251 (2%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+S+ G LVTGG+RGIG+ + GA V +R +E + G ++
Sbjct: 2 FSVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIP- 60
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D +S + E L+ V + + +L++LVNN G P + + K+M N +S +
Sbjct: 61 ADLSSEEGIEALVARVAER-SDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFF 119
Query: 133 LCQLVYPLLKASGV----GSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAK 187
L Q + PLL+A+ ++ I S+ G+ G + YGA+KAA++QLTR LA E A
Sbjct: 120 LTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAG 179
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
++I N++AP + + LL + ++ PL R G PE++A L L A +Y
Sbjct: 180 EHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDMAGLAIMLASRAGAY 239
Query: 248 ITGQIISVDGG 258
+TG +I VDGG
Sbjct: 240 LTGAVIPVDGG 250
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 8e-46
Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 3/240 (1%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
A+VTGG GIG+A LA GA V Q G G C+ S
Sbjct: 2 AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKP-TIEYSAEEYSKIMTTNFESTYHLCQLVY 138
E +++ S+F G + ILVNN G KP + + E++ N S + L QL
Sbjct: 62 DLEAVVKATVSQF-GGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P ++ +G G+I+ ISS+ + + YG++KAA+N +TRNLA + IR N+VAP
Sbjct: 121 PHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPG 180
Query: 199 YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258
KT + +L E ++ TPL R+GEPE++A+ +LC PA+++++GQ+++V GG
Sbjct: 181 AVKTDALASVL-TPEIERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQVLTVSGG 239
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 153 bits (389), Expect = 8e-46
Identities = 83/251 (33%), Positives = 131/251 (52%), Gaps = 3/251 (1%)
Query: 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV 67
F S L G A++TG GIG+ A GA V N N + E Q G
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
CD S + L SK GK++ILVNN G KP + ++ + N
Sbjct: 62 AFACRCDITSEQELSALADFALSKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNV 119
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S +HL QLV P ++ +G G I+ I+S+ + + + Y ++KAA + L RN+A + +
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
NIR N +AP T ++ ++ E K++ TP++R+G+P+++A+ +LC PAAS+
Sbjct: 180 KNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW 238
Query: 248 ITGQIISVDGG 258
++GQI++V GG
Sbjct: 239 VSGQILTVSGG 249
|
Length = 255 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 1e-45
Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 2/249 (0%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G ALVTG +RGIG+A + LA GA V SR + G C
Sbjct: 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALAC 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYH 132
+Q + L + + G+L+ILVNN N ++ + K + N +
Sbjct: 65 HIGEMEQIDALFAHIRERH-GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFF 123
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ L+K G GSIV ++SV G+S IY TKAA+ +T+ A E A IR
Sbjct: 124 MSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRV 183
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N++ P T T L +N + + +A PL+R EP E+A V YL A+SY TG+
Sbjct: 184 NALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGEC 243
Query: 253 ISVDGGFTA 261
++VDGG+ +
Sbjct: 244 LNVDGGYLS 252
|
Length = 252 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 152 bits (387), Expect = 2e-45
Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 11/246 (4%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G + LVTG + GIG+A LA GA V +RN L++ E + + V D A
Sbjct: 9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLD--VGDDA 66
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+ G + LVN G + ++ +AE + ++M N + +
Sbjct: 67 A--------IRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARH 118
Query: 137 VYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
V ++ A GSIV +SS L + Y A+KAA++ +TR L E IR NSV
Sbjct: 119 VARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSV 178
Query: 196 APWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255
P T T + + + ++A PL R E ++VA+ + +L AAS ++G + V
Sbjct: 179 NPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPV 238
Query: 256 DGGFTA 261
DGG+TA
Sbjct: 239 DGGYTA 244
|
Length = 245 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 4e-45
Identities = 89/267 (33%), Positives = 140/267 (52%), Gaps = 9/267 (3%)
Query: 3 NAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62
A ++ S + +TGG RGIG+A + A G + R+ K +
Sbjct: 255 PASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG 314
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSK 121
+ V + D A E ++ +++ G+L++LVNN G + KP++E SAE++++
Sbjct: 315 DEHLSVQADITDEA---AVESAFAQIQARW-GRLDVLVNNAGIAEVFKPSLEQSAEDFTR 370
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ N + + L+ GV IV + S+ L + + Y A+KAA+ L+R+L
Sbjct: 371 VYDVNLSGAFACARAAARLMSQGGV--IVNLGSIASLLALPPRNAYCASKAAVTMLSRSL 428
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERLLENKEF-VDKVIARTPLQRVGEPEEVASLVAYL 240
ACEWA IR N+VAP Y +T V L + D + R PL R+G+PEEVA +A+L
Sbjct: 429 ACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFL 488
Query: 241 CLPAASYITGQIISVDGGFTANGFNPG 267
PAASY+ G ++VDGG+TA G + G
Sbjct: 489 ASPAASYVNGATLTVDGGWTAFG-DAG 514
|
Length = 520 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 152 bits (385), Expect = 6e-45
Identities = 83/252 (32%), Positives = 127/252 (50%), Gaps = 8/252 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G A+VTGG IG A L GA V + + ++
Sbjct: 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIA---T 59
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D E+ + V ++F G+++ILVN T + + S ++ + N S L
Sbjct: 60 DITDDAAIERAVATVVARF-GRVDILVNLACTYL-DDGLASSRADWLAALDVNLVSAAML 117
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q +P L G G+IV +S+ +Y A+KAA+ QLTR++A + A D IR N
Sbjct: 118 AQAAHPHLARGG-GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVN 176
Query: 194 SVAPWYTKTSLVERLLE-NKEFVDKVIART-PLQRVGEPEEVASLVAYLCLPAASYITGQ 251
SV+P +T + +++ L ++ D+V A L RVG+PEEVA +VA+LC AAS++TG
Sbjct: 177 SVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGA 236
Query: 252 IISVDGGFTANG 263
+VDGG++A G
Sbjct: 237 DYAVDGGYSALG 248
|
Length = 261 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 1e-44
Identities = 87/257 (33%), Positives = 121/257 (47%), Gaps = 15/257 (5%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G TALVTG GIG A LA GA V E K G V D
Sbjct: 1 GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
D+ +I ++F G L+ILVNN G P E+ E++ +I+ S +H +
Sbjct: 61 KEDEIADMIAAAAAEF-GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
P +K G G I+ I+S GL V S S Y A K + LT+ LA E A+ I N+
Sbjct: 120 ALPHMKKQGWGRIINIASAHGL--VASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNA 177
Query: 195 VAPWYTKTSLVERLLENK---------EFVDKVI-ARTPLQRVGEPEEVASLVAYLCLPA 244
+ P Y +T LVE+ + ++ + + +V+ P +R +EVA YL A
Sbjct: 178 ICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDA 237
Query: 245 ASYITGQIISVDGGFTA 261
A+ ITGQ I +DGG+TA
Sbjct: 238 AAQITGQAIVLDGGWTA 254
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 5e-44
Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 8/252 (3%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ LVTG GIG+A + A G V RN + + + S G D
Sbjct: 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRN---VERARERADSLGPDHHALAMDV 60
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHL 133
+ Q + +++ +F G++++LVNN G T++ + EE++++ N Y +
Sbjct: 61 SDEAQIREGFEQLHREF-GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLV 119
Query: 134 CQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ L+ G G +IV ++S GL + + Y A+KAA+ LTR+LACEWA IR
Sbjct: 120 AREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRV 179
Query: 193 NSVAPWYTKTSLVERLLENKEF-VDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+V P Y +T +V L + V +R PL R+G PEE+A V +L ASYITG
Sbjct: 180 NAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGS 239
Query: 252 IISVDGGFTANG 263
+ VDGG+T G
Sbjct: 240 TLVVDGGWTVYG 251
|
Length = 520 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 6e-44
Identities = 81/251 (32%), Positives = 110/251 (43%), Gaps = 21/251 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV- 72
L G LVTGGTRGIG GA V C R E V G
Sbjct: 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------------TVDGRPA 49
Query: 73 ----CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
D PDQ L+ + + G+L++LVNN G + E S + KI+ N
Sbjct: 50 EFHAADVRDPDQVAALVDAIVERH-GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLL 108
Query: 129 STYHLCQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+ + Q +++ G GSIV I SV G + YGA KA + LTR+LA EWA
Sbjct: 109 APLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAP 168
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
+R N+V +T E + E + V A PL R+ P ++A +L ASY
Sbjct: 169 K-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASY 227
Query: 248 ITGQIISVDGG 258
++G + V GG
Sbjct: 228 VSGANLEVHGG 238
|
Length = 252 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 147 bits (372), Expect = 5e-43
Identities = 84/254 (33%), Positives = 134/254 (52%), Gaps = 10/254 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+ A++TG + GIGQA+ LA GA V E +++ + + +S G D
Sbjct: 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAE-AVSETVDKIKSNGGKAKAYHVD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYHL 133
+ Q + E+ +F G++++L NN G + I EY + + KIM + T+ +
Sbjct: 63 ISDEQQVKDFASEIKEQF-GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLM 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+++ PL+ G GSI+ SS G + S Y A K A+ T+++A E+ +D IR N
Sbjct: 122 TKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRAN 180
Query: 194 SVAPWYTKTSLVERLLENKE------FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
++AP +T LV++L E F + TPL R+G+PEEVA LV +L +S+
Sbjct: 181 AIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSF 240
Query: 248 ITGQIISVDGGFTA 261
ITG+ I +DGG A
Sbjct: 241 ITGETIRIDGGVMA 254
|
Length = 272 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 5e-43
Identities = 81/249 (32%), Positives = 112/249 (44%), Gaps = 8/249 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
A+VTG GIGQA E LA GA V N + K+ + G D
Sbjct: 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVD 63
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNV---GTNIRKPTIEYSAEEYSKIMTTNFESTY 131
+ PD + + S F G ++ LVNN G I + Y K M+ N +
Sbjct: 64 VSDPDSAKAMADATVSAF-GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ VY + G G+IV SS + + YG K +N LT+ LA E NIR
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTAAWLY---SNFYGLAKVGLNGLTQQLARELGGMNIR 179
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N++AP T R + KEFV ++ PL R+G PE++ + +L AS+ITGQ
Sbjct: 180 VNAIAPGPIDTE-ATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQ 238
Query: 252 IISVDGGFT 260
I +VDGG
Sbjct: 239 IFNVDGGQI 247
|
Length = 250 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 1e-41
Identities = 82/253 (32%), Positives = 116/253 (45%), Gaps = 13/253 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSV 72
LK +VTGG GIG A LA GA+ R+ E + L+ Q + V +
Sbjct: 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDL 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D Q +++ +KF G+++ LVNN G N +E E + + N Y
Sbjct: 65 TD---DAQCRDAVEQTVAKF-GRIDGLVNNAGVNDGV-GLEAGREAFVASLERNLIHYYV 119
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ P LKAS G+IV ISS L+ G S Y A K A LTR A AKD +R
Sbjct: 120 MAHYCLPHLKASR-GAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRV 178
Query: 193 NSVAPWYTKTSLVERLLEN----KEFVDKVIARTPL-QRVGEPEEVASLVAYLCLPAASY 247
N+V P T L E + + + + A+ PL R+ EE+A +L +S+
Sbjct: 179 NAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSH 238
Query: 248 ITGQIISVDGGFT 260
TGQ + VDGG+
Sbjct: 239 TTGQWLFVDGGYV 251
|
Length = 258 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 143 bits (361), Expect = 2e-41
Identities = 90/248 (36%), Positives = 130/248 (52%), Gaps = 10/248 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
KG AL+TGGTRGIG+A E GA V + K L+E KG CD
Sbjct: 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE---KGVFTIK--CD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ DQ +K + V +F G++++LVNN G P E+ E+Y+K++ N +
Sbjct: 60 VGNRDQVKKSKEVVEKEF-GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTT 118
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGS-IYGATKAAMNQLTRNLACEWAKDNIRTN 193
PLLK S G+IV I+S G+ G+ Y TKA + LTR LA E K IR N
Sbjct: 119 YEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVN 178
Query: 194 SVAPWYTKTSLV---ERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
+VAP + +T + + E ++ + +T L+ G+PE++A++V +L A YITG
Sbjct: 179 AVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITG 238
Query: 251 QIISVDGG 258
Q+I DGG
Sbjct: 239 QVIVADGG 246
|
Length = 255 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 2e-41
Identities = 87/260 (33%), Positives = 116/260 (44%), Gaps = 19/260 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G ALVTG GIG+AT + LA GA V +E E + G C
Sbjct: 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRAL-GVAC 477
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + +E F G ++I+V+N G I P E S E++ + N + +
Sbjct: 478 DVTDEAAVQAAFEEAALAFGG-VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLV 536
Query: 134 CQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIR 191
+ ++KA G+G SIVFI+S + + G YGA KAA L R LA E D IR
Sbjct: 537 AREAVRIMKAQGLGGSIVFIASKNAV-NPGPNFGAYGAAKAAELHLVRQLALELGPDGIR 595
Query: 192 TNSVAP---------WYTKTSLVERL----LENKEFVDKVIARTPLQRVGEPEEVASLVA 238
N V P W T + R L +E + AR L+R PE+VA V
Sbjct: 596 VNGVNPDAVVRGSGIW-TGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVV 654
Query: 239 YLCLPAASYITGQIISVDGG 258
+L S TG II+VDGG
Sbjct: 655 FLASGLLSKTTGAIITVDGG 674
|
Length = 681 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 2e-41
Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 4/240 (1%)
Query: 20 ALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTGG GIG A + LA G V C NE L+E + GF D +S
Sbjct: 3 ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF 62
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ + + +V ++ G +++LVNN G + + E++S ++ TN S +++ Q V
Sbjct: 63 ESCKAAVAKVEAEL-GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVI 121
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
++ G G I+ ISSV G + Y A KA M T+ LA E A + N+++P
Sbjct: 122 DGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPG 181
Query: 199 YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258
Y T +V + E + ++ ++A+ P+ R+G PEE+A+ VA+L A YITG +S++GG
Sbjct: 182 YIATDMVMAMRE--DVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSINGG 239
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 141 bits (356), Expect = 8e-41
Identities = 84/251 (33%), Positives = 129/251 (51%), Gaps = 5/251 (1%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+ L G ALVTG ++GIG A E LA GA V R+ +L + + +G
Sbjct: 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALA 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D D I ++ G ++ILVNN G R P ++ A+ + +++ TN S ++
Sbjct: 66 FDVTDHDAVRAAIDAFEAEI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFY 124
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNI 190
+ Q V + A G G I+ I+SV S + I Y ATK A+ LT+ +A +WAK +
Sbjct: 125 VGQAVARHMIARGAGKIINIASVQ--SALARPGIAPYTATKGAVGNLTKGMATDWAKHGL 182
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
+ N++AP Y T L L+ + EF + RTP R G+ EE+ +L A+S++ G
Sbjct: 183 QCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNG 242
Query: 251 QIISVDGGFTA 261
++ VDGG TA
Sbjct: 243 HVLYVDGGITA 253
|
Length = 255 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 9e-41
Identities = 83/258 (32%), Positives = 128/258 (49%), Gaps = 23/258 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV--ELNKCLKEWQSKGFVVSG 70
LKG ALVTG + GIG+A LA GA VV+ S+ + E+ + +K K V
Sbjct: 1 LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
V + L Q +F G L+ILVNN G + E + E+++K++ N
Sbjct: 61 DVSK---EEDVVALFQSAIKEF-GTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQ 116
Query: 131 YHLC--QLVYPLLKASGVGSIVFISSV------GGLSHVGSGSIYGATKAAMNQLTRNLA 182
+ LC + + K+ G I+ +SSV G + Y A+K + +T+ LA
Sbjct: 117 F-LCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVN------YAASKGGVKMMTKTLA 169
Query: 183 CEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
E+A IR N++AP T + ++ E +++ P+ R+GEPEE+A+ A+L
Sbjct: 170 QEYAPKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLAS 229
Query: 243 PAASYITGQIISVDGGFT 260
ASY+TG + VDGG T
Sbjct: 230 DEASYVTGTTLFVDGGMT 247
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 1e-40
Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 6/251 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A+VTG GIG+AT + A GA V R+ + + G D
Sbjct: 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQGD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
S + E L+ V +++ G+L++LVNN G + ++ +M N +
Sbjct: 62 VGSAEAVEALVDFVAARW-GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P+++ G GSIV +S L+ + Y A+K A+ LTR +A + A D IR N+
Sbjct: 121 KYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNA 180
Query: 195 VAPWYTKTSLVERLL---ENKEFVDKVI-ARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
VAP T R+ + E + + + AR P+ R G EEVA +L +S+ TG
Sbjct: 181 VAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATG 240
Query: 251 QIISVDGGFTA 261
+ VDGG+ A
Sbjct: 241 TTLVVDGGWLA 251
|
Length = 252 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 2e-40
Identities = 87/273 (31%), Positives = 122/273 (44%), Gaps = 40/273 (14%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L+G +VTGG+ GIG A V+EL GA V + + + ++ FV
Sbjct: 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG-----QHENYQFVP----T 56
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK---------PTIEYSAEEYSKIMT 124
D +S ++ + E+ KF G+++ LVNN G NI + E + + K+
Sbjct: 57 DVSSAEEVNHTVAEIIEKF-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFN 115
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
N + + + Q V + G IV +SS GL S Y ATKAA+N TR+ A E
Sbjct: 116 INQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKE 175
Query: 185 WAKDNIRTNSVAPW-----------------YTKTSLVERLLENKEFVDKVIARTPLQRV 227
K NIR VAP YT+ VE+L + PL R
Sbjct: 176 LGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGY----TKTSTIPLGRS 231
Query: 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFT 260
G+ EVA LV YL ASYITG ++ GG T
Sbjct: 232 GKLSEVADLVCYLLSDRASYITGVTTNIAGGKT 264
|
Length = 266 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 2e-40
Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 34/265 (12%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA---VVH---------TCSRNEVELNKCLKEWQ 62
LKG AL+TGG GIG+A A GA +V+ T R E E KCL
Sbjct: 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCL---- 99
Query: 63 SKGFVVSGSVCDAA-SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY-SAEEYS 120
++ G V D A D E+ ++E+G +L+ILVNN + ++E +AE+
Sbjct: 100 ----LIPGDVSDEAFCKDAVEETVRELG-----RLDILVNNAAFQYPQQSLEDITAEQLD 150
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLT 178
K TN S +H+ + P LK G +I+ S+ G G+ ++ Y ATK A++ T
Sbjct: 151 KTFKTNIYSYFHMTKAALPHLK-QG-SAIINTGSITGYE--GNETLIDYSATKGAIHAFT 206
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVA 238
R+LA + IR N+VAP T L+ + ++ V + + TP+QR G+PEE+A
Sbjct: 207 RSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEK-VSQFGSNTPMQRPGQPEELAPAYV 265
Query: 239 YLCLPAASYITGQIISVDGGFTANG 263
+L P +SYITGQ++ V+GG NG
Sbjct: 266 FLASPDSSYITGQMLHVNGGVIVNG 290
|
Length = 290 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 3e-40
Identities = 82/268 (30%), Positives = 130/268 (48%), Gaps = 21/268 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLK A++TGGT +G A LA GA V RN+ + +K KE + G
Sbjct: 2 SLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAA 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI--------------EYSAEEY 119
D E+ +E+ ++F G ++IL+N G N T + E +
Sbjct: 62 DVLDRASLERAREEIVAQF-GTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
+ N ++ Q+ + GSI+ ISS+ S + Y A KAA++ T+
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQ 180
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE--FVD---KVIARTPLQRVGEPEEVA 234
LA E+A +R N++AP + T +LL N + + D K++ RTP+ R G+PEE+
Sbjct: 181 WLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRFGKPEELL 240
Query: 235 SLVAYLC-LPAASYITGQIISVDGGFTA 261
+ +L A+S++TG +I VDGGF+A
Sbjct: 241 GALLFLASEKASSFVTGVVIPVDGGFSA 268
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 2e-39
Identities = 81/248 (32%), Positives = 129/248 (52%), Gaps = 12/248 (4%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN---KCLKEWQSKGFVVSGSVCDAAS 77
L+TGG G+G AT LA GA + NE L L E V+ D +
Sbjct: 7 LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLL-IKADVSD 65
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFESTYHLCQL 136
Q E + +F G+++ NN G ++ T ++ A+E+ K+++ N ++ +
Sbjct: 66 EAQVEAYVDATVEQF-GRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEK 124
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
V +++ G G IV +SVGG+ VG+ S Y A K + LTRN A E+ + IR N++A
Sbjct: 125 VLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIA 184
Query: 197 PWYTKTSLVERLL-----EN-KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
P T +VE L EN +E ++ ++ P++R GEPEEVA++VA+L A Y+
Sbjct: 185 PGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSDDAGYVNA 244
Query: 251 QIISVDGG 258
++ +DGG
Sbjct: 245 AVVPIDGG 252
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 3e-39
Identities = 81/251 (32%), Positives = 122/251 (48%), Gaps = 12/251 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG T GIG A L G V C+R E L +KE + G G CD S
Sbjct: 5 VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSV 64
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ E L+ +++ G +++LVNN G + T E + E + ++ TN + + + V
Sbjct: 65 PEIEALVAAAVARY-GPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVL 123
Query: 139 PL--LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
+ G G I+ I+S GG V + Y A+K + T+ L E A+ I N+V
Sbjct: 124 KAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 183
Query: 197 PWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
P + +T + + E+ +E D++ AR PL R PEEVA +VAYL A+
Sbjct: 184 PGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDGAAA 243
Query: 248 ITGQIISVDGG 258
+T Q ++V GG
Sbjct: 244 VTAQALNVCGG 254
|
Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 4e-39
Identities = 76/252 (30%), Positives = 113/252 (44%), Gaps = 13/252 (5%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G ALVTGG GIG A + LA GA V + K + Q + G CD
Sbjct: 1 GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRAL-GVQCDVT 59
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
S Q + ++ +F G L+I+V+N G P E S E++++ M N + + +
Sbjct: 60 SEAQVQSAFEQAVLEFGG-LDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSRE 118
Query: 137 VYPLLKASGVG-SIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ ++K+ G+G +IVF +S + G + Y A KAA L R LA E +D IR N+
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAV-APGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNT 177
Query: 195 VAP--------WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
V P + R ++ R L+R PE+VA V +
Sbjct: 178 VNPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVVAMASEDFG 237
Query: 247 YITGQIISVDGG 258
TG I++VDGG
Sbjct: 238 KTTGAIVTVDGG 249
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 1e-38
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 12/254 (4%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+SL+G ALVTG G+GQ LA GA + R E ++ ++ ++ G
Sbjct: 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGR--SEPSETQQQVEALGRRFLSLT 58
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + + L+ +F G ++ILVNN G R E+S +++ +M N +S +
Sbjct: 59 ADLSDIEAIKALVDSAVEEF-GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFF 117
Query: 133 LCQLV-YPLLKASGVGSIVFISSV----GGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
L Q LK G I+ I+S+ GG+ V S Y A+K A+ LT+ LA EWA
Sbjct: 118 LTQAAAKHFLKQGRGGKIINIASMLSFQGGI-RVPS---YTASKHAVAGLTKLLANEWAA 173
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
I N++AP Y T+ + L +++ ++ R P R G P+++ +L A+ Y
Sbjct: 174 KGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDY 233
Query: 248 ITGQIISVDGGFTA 261
+ G ++VDGG+ A
Sbjct: 234 VNGYTLAVDGGWLA 247
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 2e-38
Identities = 81/250 (32%), Positives = 118/250 (47%), Gaps = 14/250 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G TAL+TGGT GIG T + GA V R+ L E V+ D
Sbjct: 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIR---AD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A ++ L Q + F G+L+ + N G P ++ + + TN + Y L
Sbjct: 61 AGDVAAQKALAQALAEAF-GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLI 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q + PLL A+ SIV S+ +H+G + S+Y A+KAA+ L + L+ E IR
Sbjct: 120 QALLPLL-ANP-ASIVLNGSIN--AHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRV 175
Query: 193 NSVAPWYTKTSLVERL----LENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
N+V+P +T L +L ++ A PL R G PEE+A V YL +++I
Sbjct: 176 NAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFI 235
Query: 249 TGQIISVDGG 258
G I VDGG
Sbjct: 236 VGSEIIVDGG 245
|
Length = 249 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 3e-38
Identities = 81/250 (32%), Positives = 127/250 (50%), Gaps = 10/250 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
G ALVTG +GIG+ATV+ LA GA V SR + +L+ ++E +
Sbjct: 4 DFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPG----IEPVCV 59
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + D E+ + VG +++LVNN I +P +E + E + + N + H+
Sbjct: 60 DLSDWDATEEALGSVGP-----VDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHV 114
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q+V + A GV GSIV +SS + + ++Y +TKAA++ LT+ +A E IR
Sbjct: 115 SQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRV 174
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
NSV P T + + E K++ R PL + E E+V + + +L +S TG
Sbjct: 175 NSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMTTGST 234
Query: 253 ISVDGGFTAN 262
+ VDGGF A+
Sbjct: 235 LPVDGGFLAS 244
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 4e-38
Identities = 76/259 (29%), Positives = 123/259 (47%), Gaps = 22/259 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+G +VTG +GIG+ E LAG GA V R+E+ +++ L E + G D
Sbjct: 2 FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAGDAAHVHTAD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ + +++ +F G++++L+NNVG T KP Y E+ + + T
Sbjct: 61 LETYAGAQGVVRAAVERF-GRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWC 119
Query: 134 CQLVYPLLKASGVGSIVFISSVG--GLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
C+ V P + G IV +SS+ G+ + Y A K +N LT +LA E A+D IR
Sbjct: 120 CRAVLPHMLERQQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTASLAFEHARDGIR 175
Query: 192 TNSVAPWYTKTSLVERLLEN------------KEFVDKVIARTPLQRVGEPEEVASLVAY 239
N+VAP T+ ++ N + VD+ + + + R G +E + +
Sbjct: 176 VNAVAPGGTEAP-PRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAILF 234
Query: 240 LCLPAASYITGQIISVDGG 258
L ASYITG ++ V GG
Sbjct: 235 LASDEASYITGTVLPVGGG 253
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 7e-38
Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 9/253 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G TAL+TG +GIG+ A GA + + E+ K E +G + V D
Sbjct: 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVAD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
P I+ K G+++ILVNN G ++ S E+ + N + +++
Sbjct: 63 VRDPASVAAAIKRAKEKE-GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVT 121
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIRTN 193
+ V P + A G IV +SSV G G Y TKAA+ LT++LA E+A+ IR N
Sbjct: 122 KAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVN 181
Query: 194 SVAPWYTKTSLVERLL-----ENKEFVDKVIAR-TPLQRVGEPEEVASLVAYLCLPAASY 247
++ P Y +T + E + E+ E V +A+ PL+R+ +P EV L A+L +SY
Sbjct: 182 AICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSY 241
Query: 248 ITGQIISVDGGFT 260
+TG +DGG T
Sbjct: 242 LTGTQNVIDGGST 254
|
Length = 263 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 7e-38
Identities = 83/264 (31%), Positives = 127/264 (48%), Gaps = 33/264 (12%)
Query: 14 SLKGMTALVTGGTRGIGQATVEEL--AGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
+ AL+TGG R IG A L AG +H R+ E + E + + GS
Sbjct: 3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIH-YHRSAAEADALAAELNA---LRPGS 58
Query: 72 VC----DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
D PD +L+ + F G+L+ LVNN + P + ++ + +N
Sbjct: 59 AAALQADLLDPDALPELVAACVAAF-GRLDALVNNASSFYPTPLGSITEAQWDDLFASNL 117
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
++ + L Q P L+ G+IV I+ + + +Y A KAA+ LTR+LA E A
Sbjct: 118 KAPFFLSQAAAPQLRKQR-GAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAP 176
Query: 188 DNIRTNSVAP----WYTKTSLVERLLENKEFVD-----KVIARTPLQRVGEPEEVASLVA 238
+ +R N+VAP W E+ D ++ARTPL+R+G PE++A V
Sbjct: 177 E-VRVNAVAPGAILW----------PEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVR 225
Query: 239 YLCLPAASYITGQIISVDGGFTAN 262
+L L AS+ITGQI++VDGG +
Sbjct: 226 FL-LADASFITGQILAVDGGRSLT 248
|
Length = 249 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 3e-37
Identities = 78/252 (30%), Positives = 117/252 (46%), Gaps = 13/252 (5%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L+G A+VTG G G+ A GA V N + + + V
Sbjct: 1 MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADV 60
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTY 131
A + +++ SKF G+L+ILVNN G R KP +E EE+ ++ N +S Y
Sbjct: 61 TKRADVEA---MVEAALSKF-GRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIY 116
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
Q + P ++ G G I+ I+S GL + Y A+K + T+ +A E A NIR
Sbjct: 117 LSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIR 176
Query: 192 TNSVAPWYTKTSLVERLL-----ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
N + P +T L+ + EN+ K A PL R+ P+++A+ YL AS
Sbjct: 177 VNCLCPVAGETPLLSMFMGEDTPENRA---KFRATIPLGRLSTPDDIANAALYLASDEAS 233
Query: 247 YITGQIISVDGG 258
+ITG + VDGG
Sbjct: 234 FITGVALEVDGG 245
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 3e-37
Identities = 69/251 (27%), Positives = 121/251 (48%), Gaps = 5/251 (1%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+SL G L+TG +GIG LA GA + + + + +G +
Sbjct: 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAP 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
+ + E I+ + G +++L+NN G R P E+ +E++ ++ N + +
Sbjct: 65 FNVTHKQEVEAAIEHIEKDI-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFL 123
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNI 190
+ Q V + G I+ I S+ S +G +I Y A+K A+ LTR + E A+ NI
Sbjct: 124 VSQAVARYMVKRQAGKIINICSMQ--SELGRDTITPYAASKGAVKMLTRGMCVELARHNI 181
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
+ N +AP Y KT + + L+E++ F + RTP R G+P+E+ +L A+ ++ G
Sbjct: 182 QVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNG 241
Query: 251 QIISVDGGFTA 261
++ VDGG
Sbjct: 242 HLLFVDGGMLV 252
|
Length = 254 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 7e-37
Identities = 92/268 (34%), Positives = 133/268 (49%), Gaps = 22/268 (8%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVV-------HTCSRNEVELNKC 57
E S+K S LKG AL+TGG GIG+A A GA V E + K
Sbjct: 15 EKSYKGSG-KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETK--KL 71
Query: 58 LKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY-SA 116
++E K ++ G D L++EV +F GKL+ILVNN + +IE +
Sbjct: 72 IEEEGRKCLLIPG---DLGDESFCRDLVKEVVKEF-GKLDILVNNAAYQHPQESIEDITT 127
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAM 174
E+ K TN S ++L + P LK G SI+ +SV + GS + Y ATK A+
Sbjct: 128 EQLEKTFRTNIFSMFYLTKAALPHLK-KG-SSIINTTSVTA--YKGSPHLLDYAATKGAI 183
Query: 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVA 234
TR L+ + A+ IR N+VAP T L+ +E V + ++ P+ R G+P EVA
Sbjct: 184 VAFTRGLSLQLAEKGIRVNAVAPGPIWTPLIPSSF-PEEKVSEFGSQVPMGRAGQPAEVA 242
Query: 235 SLVAYLCLPAASYITGQIISVDGGFTAN 262
+L +SY+TGQ++ V+GG N
Sbjct: 243 PAYVFLASQDSSYVTGQVLHVNGGEIIN 270
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 1e-36
Identities = 82/256 (32%), Positives = 128/256 (50%), Gaps = 22/256 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK A+VTGG++GIG+A V L G+ V E N F D
Sbjct: 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND------VDYFK-----VD 52
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
++ +Q K I V SK+ G+++ILVNN G +E+ +I+ N + +
Sbjct: 53 VSNKEQVIKGIDYVISKY-GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMS 111
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P + G I+ I+SV + + + Y +K A+ LTR++A ++A IR +
Sbjct: 112 KYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIRCVA 170
Query: 195 VAPWYTKTSLVERLLE-----NKEFVDKVIAR----TPLQRVGEPEEVASLVAYLCLPAA 245
V P +T L+E E + E V++ I P++RVG+PEEVA +VA+L A
Sbjct: 171 VCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLA 230
Query: 246 SYITGQIISVDGGFTA 261
S+ITG+ ++VDGG A
Sbjct: 231 SFITGECVTVDGGLRA 246
|
Length = 258 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 1e-36
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 12/230 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW-QSKGFVVSGSV 72
+LKG AL+TG + GIG+AT LA GA V +R E L E ++ V
Sbjct: 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV 62
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D A+ E I+ + +F G+++ILVNN G + P E +++ +++ TN + +
Sbjct: 63 TDRAAV---EAAIEALPEEF-GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLN 118
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ V P + G I+ + S+ G G++YGATKAA+ + L E A IR
Sbjct: 119 GTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRV 178
Query: 193 NSVAPWYTKTSLVE--RLLENKEFVDKVIAR-TPLQRVGEPEEVASLVAY 239
++P +T+ R + E DKV T L PE++A V +
Sbjct: 179 TVISPGLVETTEFSTVRFEGDDERADKVYKGGTALT----PEDIAEAVLF 224
|
Length = 246 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 2e-36
Identities = 83/260 (31%), Positives = 124/260 (47%), Gaps = 17/260 (6%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK-GFVVSGSVC 73
KG ALVTG T GIG LA GA +V + E+ +K G V
Sbjct: 1 KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + P E ++ +F G ++ILVNN G P ++ E++ I+ N + +H
Sbjct: 61 DLSKPAAIEDMVAYAQRQF-GGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHT 119
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIR 191
+L P +K G G I+ I+SV GL V S S Y A K + LT+ +A E A +
Sbjct: 120 TRLALPHMKKQGWGRIINIASVHGL--VASANKSAYVAAKHGVVGLTKVVALETAGTGVT 177
Query: 192 TNSVAPWYTKTSLVERLLE---NKEFVDK-------VIARTPLQRVGEPEEVASLVAYLC 241
N++ P + T LVE+ + K V + ++ + P ++ PE++ +L
Sbjct: 178 CNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLA 237
Query: 242 LPAASYITGQIISVDGGFTA 261
AAS ITG +SVDGG+TA
Sbjct: 238 SDAASQITGTAVSVDGGWTA 257
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 2e-36
Identities = 77/254 (30%), Positives = 109/254 (42%), Gaps = 18/254 (7%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAAS 77
A++TG +GIG+A E LA G + N E ++E G+ D
Sbjct: 4 VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D E LI + KF G +++VNN G P + + E+ K+ N Q
Sbjct: 64 KDDVEALIDQAVEKF-GSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122
Query: 138 YPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
K G G I+ SS+ G+ + Y A+K A+ LT+ A E A I N+ A
Sbjct: 123 ARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYA 182
Query: 197 PWYTKTSLVERLLE------------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
P KT + + + E I PL R+ EPE+VA LV++L
Sbjct: 183 PGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSI---PLGRLSEPEDVAGLVSFLASED 239
Query: 245 ASYITGQIISVDGG 258
+ YITGQ I VDGG
Sbjct: 240 SDYITGQTILVDGG 253
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 2e-36
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 17/253 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE--VELNKCLKEWQSKGFVVSGS 71
L G A+VTGG GIG A E A GA V R+E E+ L +KG V
Sbjct: 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLV---- 67
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
CD + E + V S F G+++ILVN+ G + P + S E++ K + N + ++
Sbjct: 68 -CDVSDSQSVEAAVAAVISAF-GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSF 125
Query: 132 HLCQLVYPLLKASGVGSIVFISS----VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+ Q V + A+G G IV ++S V HV Y A+KA + +T+ LA EW
Sbjct: 126 LMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVA----YCASKAGVVGMTKVLALEWGP 181
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
I N+++P T L ++ E ++ P R PEE+A+ +L AA+
Sbjct: 182 YGITVNAISPTVVLTELGKKAWAG-EKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAM 240
Query: 248 ITGQIISVDGGFT 260
ITG+ + +DGG+T
Sbjct: 241 ITGENLVIDGGYT 253
|
Length = 255 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 2e-36
Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 22/269 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLKG A++TGG +G A +ELA GA V RN+ + + E ++ G
Sbjct: 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKA 66
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY---------------SAEE 118
D + E+ Q++ F G +IL+N G N K T + E
Sbjct: 67 DVLDKESLEQARQQILEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG 125
Query: 119 YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178
+ + N T Q+ + G+I+ ISS+ + + Y A KAA++ T
Sbjct: 126 FEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFT 185
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK-----EFVDKVIARTPLQRVGEPEEV 233
+ LA +AK IR N++AP + T LL N+ E +K++A TP+ R G+PEE+
Sbjct: 186 QWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEEL 245
Query: 234 ASLVAYLCLP-AASYITGQIISVDGGFTA 261
+ +L A+S++TG ++ VDGGF+A
Sbjct: 246 LGTLLWLADEKASSFVTGVVLPVDGGFSA 274
|
Length = 278 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 4e-36
Identities = 86/256 (33%), Positives = 112/256 (43%), Gaps = 15/256 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTGG +GIG+ E LA G V NE + KE G D +
Sbjct: 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
DQ I + KF G +++VNN G P +E + EE K+ N + Q
Sbjct: 62 DQVFSAIDQAAEKF-GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120
Query: 139 PLLKASGV-GSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
K G G I+ +S+ G H G+ S Y +TK A+ LT+ A E A I N+
Sbjct: 121 RQFKKQGHGGKIINAASIAG--HEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAY 178
Query: 196 APWYTKTSLVERLLENK-EFVDKVIART--------PLQRVGEPEEVASLVAYLCLPAAS 246
P KT + E + E E K I L R EPE+VA LV++L +
Sbjct: 179 CPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSD 238
Query: 247 YITGQIISVDGGFTAN 262
YITGQ I VDGG N
Sbjct: 239 YITGQSILVDGGMVYN 254
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 128 bits (322), Expect = 1e-35
Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 16/261 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L G TA+VTG GIG+ ELA GA V N+ N E G G
Sbjct: 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAM 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + D I +V +F G ++ILV+N G I P YS ++ K+ + + +
Sbjct: 64 DVTNEDAVNAGIDKVAERF-GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLT 122
Query: 134 CQLVYP-LLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNI 190
+ + K G ++++ SV SH S S Y K + L R LA E AK N+
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVH--SHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNV 180
Query: 191 RTNSVAPWYTKTSLVERLLEN--KEF---VDKVIAR-----TPLQRVGEPEEVASLVAYL 240
R++ V P + +T LV++ + KE ++V+ + T E+VA V +L
Sbjct: 181 RSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFL 240
Query: 241 CLPAASYITGQIISVDGGFTA 261
++ +TGQ V G+
Sbjct: 241 SSFPSAALTGQSFVVSHGWFM 261
|
Length = 262 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 1e-35
Identities = 75/245 (30%), Positives = 128/245 (52%), Gaps = 8/245 (3%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDA 75
ALVTG +RGIG+A LA G + +R+ + +E ++ G V +V D
Sbjct: 7 ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD- 65
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
++ +++ ++ +F G+L++ VNN + + +P +E + M N ++ Q
Sbjct: 66 --VEKIKEMFAQIDEEF-GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQ 122
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L++ G G I+ +SS+G + ++ + + G +KAA+ LTR LA E A I N+V
Sbjct: 123 EAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAV 182
Query: 196 APWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255
+ T ++ +E ++ A+TP R+ EPE+VA+ V +LC P A I GQ I V
Sbjct: 183 SGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIV 242
Query: 256 DGGFT 260
DGG +
Sbjct: 243 DGGRS 247
|
Length = 250 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 1e-35
Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L A+VTG +RGIG A LA G AV + + ++ + E ++ G
Sbjct: 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A +L + F G++++LVNN G ++ E++ + + TN + +
Sbjct: 63 DVADAAAVTRLFDAAETAF-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVV 121
Query: 134 CQLVYPLLKASGVGSIVFIS-SVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ L G I+ +S SV L G Y A+KAA+ L LA E I
Sbjct: 122 LREAARHLGQGG--RIINLSTSVIALPLPG-YGPYAASKAAVEGLVHVLANELRGRGITV 178
Query: 193 NSVAPWYTKTSLVERLLENK--EFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
N+VAP T L K E +D++ PL+R+G PEE+A+ VA+L P +++ G
Sbjct: 179 NAVAPGPVATEL---FFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNG 235
Query: 251 QIISVDGGF 259
Q++ V+GGF
Sbjct: 236 QVLRVNGGF 244
|
Length = 245 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 2e-35
Identities = 73/255 (28%), Positives = 107/255 (41%), Gaps = 11/255 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSV 72
L G ALVTG +GIG A A GA V + + G V
Sbjct: 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + F G L++LVNN G N+ + + E++ + + + ++
Sbjct: 65 ADVTDAASVAAAVAAAEEAF-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWN 123
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
C+ V P + G GSIV I+S + Y K + LTR L E+A N+R
Sbjct: 124 GCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRV 183
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIART------PLQRVGEPEEVASLVAYLCLPAAS 246
N++AP Y +T L E D AR P++R+G PEEVA +L A
Sbjct: 184 NAIAPGYIETQLTEDWWN--AQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAP 241
Query: 247 YITGQIISVDGGFTA 261
+I I++DGG +
Sbjct: 242 FINATCITIDGGRSV 256
|
Length = 260 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 2e-35
Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 15/252 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVH-TCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
A+VT GIG+A LA G + T +E + +E +S G D +
Sbjct: 4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD 63
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL- 136
+ + + ++ + G++++LVNN G + P ++ +E+ KI T + + + Q+
Sbjct: 64 LPEGAQALDKLIQRL-GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIA 122
Query: 137 VYPLLKASGVGSIVFISSVGGLSH-----VGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
++K G I+ I+SV H G+ S Y A K A+ LT+ +A E + I
Sbjct: 123 ARHMVKQGQGGRIINITSV----HEHTPLPGA-SAYTAAKHALGGLTKAMALELVEHGIL 177
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+VAP T + +++ + PL R G+ E+ASLVA+LC ASY TGQ
Sbjct: 178 VNAVAPGAIATPMNG--MDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQ 235
Query: 252 IISVDGGFTANG 263
+ VDGGF
Sbjct: 236 SLIVDGGFMLAN 247
|
Length = 256 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 2e-35
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 8/221 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVC 73
+KG TAL+TG + GIG ++LA G + +R E +L KE + K V V
Sbjct: 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + P+ E+L E+ + G +++LVNN G P +E S +E +++ N + L
Sbjct: 64 DLSDPEALERLEDELKERG-GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRL 122
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ V P + G G I+ I S GL ++Y ATKA + + L E ++
Sbjct: 123 TKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVT 182
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVA 234
+V P T+T + + D V +P + V PE+VA
Sbjct: 183 AVCPGPTRTEFFDA-----KGSD-VYLLSPGELVLSPEDVA 217
|
Length = 265 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 4e-35
Identities = 77/248 (31%), Positives = 110/248 (44%), Gaps = 19/248 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVC 73
T L+TG GIG A GA V ++K K S F + +
Sbjct: 3 FMTKTVLITGAASGIGLAQARAFLAQGAQV-------YGVDKQDKPDLSGNFHFLQLDLS 55
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYH 132
D P L V ++IL N G + KP ++ S EE+ I TN ST+
Sbjct: 56 DDLEP-----LFDWVP-----SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFL 105
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L + P + G I+ + S+ G G+ Y A+K A+ T+ LA ++AKD I+
Sbjct: 106 LTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQV 165
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
+AP KT + E D V TP++R EPEEVA L +L A Y+ G I
Sbjct: 166 FGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTI 225
Query: 253 ISVDGGFT 260
+ +DGG+T
Sbjct: 226 VPIDGGWT 233
|
Length = 235 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 4e-35
Identities = 80/248 (32%), Positives = 130/248 (52%), Gaps = 7/248 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELA--GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
L G A+VTGG +GIG+A LA G V++ S E N + E +G V
Sbjct: 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAEN-LVNELGKEGHDVYAV 61
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + + +L++E + F GK++ILVNN G + + + E++ +++ N S +
Sbjct: 62 QADVSKVEDANRLVEEAVNHF-GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVF 120
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ V P + + G I+ ISS+ G + + Y A KA M T++LA E AK N+
Sbjct: 121 NTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVT 180
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N++ P + T +V + E K++A+ P +R G+ +E+A V YLC A YITGQ
Sbjct: 181 VNAICPGFIDTEMVAEVPEEVR--QKIVAKIPKKRFGQADEIAKGVVYLCRDGA-YITGQ 237
Query: 252 IISVDGGF 259
++++GG
Sbjct: 238 QLNINGGL 245
|
Length = 247 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 5e-35
Identities = 83/251 (33%), Positives = 117/251 (46%), Gaps = 12/251 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G A+VTG GIG A LA GA V + + + + V D
Sbjct: 1 LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
Q L + +F G L++LVNN G ++ I+ + + M N T+
Sbjct: 61 EQ---QVAALFERAVEEFGG-LDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLC 116
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
C+ P + A G GSIV +SS+ G S YGA+KAA+ LTR LA E IR N
Sbjct: 117 CRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCN 176
Query: 194 SVAPWYTKTSLVERLLENKE------FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
++AP T L+ L E +I + R+G PE+VA+ V +L AS+
Sbjct: 177 ALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQL-QGRLGRPEDVAAAVVFLLSDDASF 235
Query: 248 ITGQIISVDGG 258
ITGQ++ VDGG
Sbjct: 236 ITGQVLCVDGG 246
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 6e-35
Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 15/256 (5%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
++ + G +V GGT GI + A GA V SR++ +++ + + Q G
Sbjct: 2 TTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGL 61
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
G D E ++ +F G +++LV+ N P SA + ++ +
Sbjct: 62 GVSADVRDYAAVEAAFAQIADEF-GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLG 120
Query: 130 TYHLCQLVYPLLKASGVGSIVFISS------VGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
T+++ + YPLL+ G SI+ IS+ + +HV A KA ++ LTR LA
Sbjct: 121 TFNVLKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVC------AAKAGVDMLTRTLAL 173
Query: 184 EWAKDNIRTNSVAPW-YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
EW + IR NS+ P T + RL + E V PL+R G +++A+ +L
Sbjct: 174 EWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLAS 233
Query: 243 PAASYITGQIISVDGG 258
ASYITG ++ VDGG
Sbjct: 234 DMASYITGVVLPVDGG 249
|
Length = 264 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 9e-35
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 21/257 (8%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVCD 74
+ L+TG IG+A + L GA + N L + +E + V D
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI---EYSAEEYSKIMTTNFESTY 131
S + ++LI+ KF G+++IL+NN + + E+ E++++++ N +
Sbjct: 61 ITSKESIKELIESYLEKF-GRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGL----------SHVGSGSIYGATKAAMNQLTRNL 181
Q L K G GSI+ I+S+ G+ + + S Y KA + LT+ L
Sbjct: 120 LCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYL 179
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
A +A IR N+++P + + EF++K + PL+R+ PE++ + +L
Sbjct: 180 AKYYADTGIRVNAISPGGILNN------QPSEFLEKYTKKCPLKRMLNPEDLRGAIIFLL 233
Query: 242 LPAASYITGQIISVDGG 258
A+SY+TGQ + +DGG
Sbjct: 234 SDASSYVTGQNLVIDGG 250
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 2e-34
Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 20/251 (7%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
+VTG +GIG+A L GA V V L G + + D A
Sbjct: 1 VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLL-------LEYGDPLRLTPLDVADAA 53
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
++ + ++ +G ++ LVN G T S E++ + N ++L Q V P
Sbjct: 54 AVREVCSRLLAE-HGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAP 112
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+K G+IV ++S +HV S+ YGA+KAA+ L++ L E A +R N V+P
Sbjct: 113 HMKDRRTGAIVTVAS--NAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSP 170
Query: 198 WYTKTSLVERLLENKEFVDKVIA------RT--PLQRVGEPEEVASLVAYLCLPAASYIT 249
T T++ L +++ +VIA R PL ++ +P ++A+ V +L A +IT
Sbjct: 171 GSTDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGHIT 230
Query: 250 GQIISVDGGFT 260
+ VDGG T
Sbjct: 231 MHDLVVDGGAT 241
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 2e-34
Identities = 66/188 (35%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
ALVTG RGIG V +LA G V +R+ +++ +++G V D
Sbjct: 2 VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFESTYHLCQL 136
E V K+ G L+ILVNN G + + E+ + M TNF T + Q
Sbjct: 62 DASIEAAADFVEEKY-GGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQA 120
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
+ PLLK S G IV +SS GL + S YG +KAA+N LTR LA E + I+ N+
Sbjct: 121 LLPLLKKSPAGRIVNVSS--GLGSLTSA--YGVSKAALNALTRILAKELKETGIKVNACC 176
Query: 197 PWYTKTSL 204
P + KT +
Sbjct: 177 PGWVKTDM 184
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 3e-34
Identities = 84/253 (33%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+ L G AL+TG + GIG+ GA V +R+ L K E + G V
Sbjct: 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVC 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD + Q ++ +V ++ G ++I V N G P ++ EE+ ++ TN +
Sbjct: 65 CDVSQHQQVTSMLDQVTAELGG-IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFL 123
Query: 133 LCQLVYPLLKASGVG-SIVFISSVGGLSHV----GSGSIYGATKAAMNQLTRNLACEWAK 187
Q + G G I+ +S+ G H+ S Y A+KAA+ LT+ +A E A
Sbjct: 124 TAQAAAKAMVKQGQGGVIINTASMSG--HIINVPQQVSHYCASKAAVIHLTKAMAVELAP 181
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
IR NSV+P Y T LVE E + + I PL R+G PEE+A L YL A+SY
Sbjct: 182 HKIRVNSVSPGYILTELVEPYTEYQPLWEPKI---PLGRLGRPEELAGLYLYLASEASSY 238
Query: 248 ITGQIISVDGGFT 260
+TG I +DGG+T
Sbjct: 239 MTGSDIVIDGGYT 251
|
Length = 253 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 4e-34
Identities = 80/259 (30%), Positives = 119/259 (45%), Gaps = 16/259 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVC 73
L G L+TG ++GIG A E A G +H +R+ L + ++ V V+
Sbjct: 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D +SP+ RE+L E G ++ILVNN G + + L
Sbjct: 65 DLSSPEAREQLAAEAGD-----IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDL 119
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT-KAAMNQLTRNLACEWAKDNIRT 192
+L YP +KA G G IV + G + + I G+ AA+ TR L + D +R
Sbjct: 120 TRLAYPRMKARGSGVIVNVIGAAG-ENPDADYICGSAGNAALMAFTRALGGKSLDDGVRV 178
Query: 193 NSVAPWYTKTSLVERLLENK---EFVD-----KVIARTPLQRVGEPEEVASLVAYLCLPA 244
V P T + LL+ + E D +++A PL R PEEVA LVA+L P
Sbjct: 179 VGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPR 238
Query: 245 ASYITGQIISVDGGFTANG 263
+ Y +G +++VDGG +A G
Sbjct: 239 SGYTSGTVVTVDGGISARG 257
|
Length = 259 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 4e-34
Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 19/255 (7%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV--------ELNKCLKEWQSKGFVVSGS 71
A +TG G+G+A +A GA V N+ E+N E + V
Sbjct: 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQ--- 58
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D Q + L+ + G L++LVNN G + +E+ ++M N ES +
Sbjct: 59 --DVTDEAQWQALLAQAADAMGG-LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIF 115
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD--N 189
C+ P L+AS SIV ISSV + Y A+KAA+ LT+++A + A+ +
Sbjct: 116 LGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLD 175
Query: 190 IRTNSVAPWYTKTSLVE---RLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
+R NS+ P + +T +V+ + L +E K+ PL R+GEP++VA V YL +
Sbjct: 176 VRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESR 235
Query: 247 YITGQIISVDGGFTA 261
++TG + +DGG A
Sbjct: 236 FVTGAELVIDGGICA 250
|
Length = 251 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 5e-34
Identities = 80/260 (30%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ALVTGGT+GIG ATV L GA V T +R+ + + FV + D
Sbjct: 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD-----DLPEGVEFVAA----D 57
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA---EEYSKIMTTNFESTY 131
+ + + + V + G ++ILV+ +G + P ++A EE+ + N +
Sbjct: 58 LTTAEGCAAVARAVLERL-GGVDILVHVLGGS-SAPAGGFAALTDEEWQDELNLNLLAAV 115
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNI 190
L + + P + A G G I+ ++S+ + + Y A KAA++ +++L+ E A +
Sbjct: 116 RLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGV 175
Query: 191 RTNSVAPWYTKTS----LVERLLEN--------KEFVDKVIARTPLQRVGEPEEVASLVA 238
R N+V+P + +T L ERL E K+ + + PL R EPEEVA L+A
Sbjct: 176 RVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIA 235
Query: 239 YLCLPAASYITGQIISVDGG 258
+L A+ ITG +DGG
Sbjct: 236 FLASDRAASITGTEYVIDGG 255
|
Length = 260 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 9e-34
Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 15/257 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSG 70
L G A++TG + GIG+A + A GA V +R + EL++ + E +++G ++G
Sbjct: 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFES 129
V D A + L+ +F G L+I NN GT P E S E + + + TN S
Sbjct: 63 DVRDEAY---AKALVALAVERF-GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTS 118
Query: 130 TYHLCQLVYPLLKASGVGSIVFISS-VG---GLSHVGSGSIYGATKAAMNQLTRNLACEW 185
+ + P + A G GS++F S+ VG G + + Y A+KA + LT+ LA E+
Sbjct: 119 AFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAA---YAASKAGLIGLTQVLAAEY 175
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
IR N++ P T T + + + E + V L+R+ +PEE+A +L AA
Sbjct: 176 GAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAA 235
Query: 246 SYITGQIISVDGGFTAN 262
S++TG + VDGG +
Sbjct: 236 SFVTGTALLVDGGVSIT 252
|
Length = 254 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-33
Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 13/251 (5%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
LVTG +GIG A LA GA V RN +L + + + + G+ + D A
Sbjct: 1 VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
++++Q + + G +++LVN G S E++ N +++ Q V P
Sbjct: 61 AVDEVVQRLERE-YGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+K G+IV + S ++V + Y A+KAA+ LT+ L E A IR N V+P
Sbjct: 120 RMKRRRSGAIVTVGS--NAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSP 177
Query: 198 WYTKTSLVERLLENKEFVDKVIA------RT--PLQRVGEPEEVASLVAYLCLPAASYIT 249
T T + +L ++ +VIA R PL ++ EP ++A+ V +L AS+IT
Sbjct: 178 GSTDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDLASHIT 237
Query: 250 GQIISVDGGFT 260
+ VDGG T
Sbjct: 238 MHDLVVDGGAT 248
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 2e-33
Identities = 72/246 (29%), Positives = 124/246 (50%), Gaps = 6/246 (2%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
++TGG+ G+G+A + A GA V R + +L + E + V D
Sbjct: 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+P+ +K+++++ KF G+++ L+NN N P + S ++ ++ T++ Q
Sbjct: 61 NPEDVQKMVEQIDEKF-GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQA 119
Query: 137 VYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGAT-KAAMNQLTRNLACEWAKD-NIRTN 193
V G+ G+I+ + + G G I+ A KA + +TR LA EW + IR N
Sbjct: 120 VGKYWIEKGIKGNIINMVATYAW-DAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVN 178
Query: 194 SVAPW-YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
++AP +T ++L E++E + I PL R+G PEE+A L +L A+YI G
Sbjct: 179 AIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTC 238
Query: 253 ISVDGG 258
I++DGG
Sbjct: 239 ITMDGG 244
|
Length = 252 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 2e-33
Identities = 77/245 (31%), Positives = 111/245 (45%), Gaps = 7/245 (2%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVCDAAS 77
TALVTG GIGQA G V + L FV V+ + DAAS
Sbjct: 4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAAS 63
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
L + G +++LV N G + + + N E+ Y + V
Sbjct: 64 LAAA--LANAAAER--GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAV 119
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+ G++V I SV G++ +G + Y A KA + T+ LA E+ + IR N+VAP
Sbjct: 120 LEGMLKRSRGAVVNIGSVNGMAALGHPA-YSAAKAGLIHYTKLLAVEYGRFGIRANAVAP 178
Query: 198 WYTKTSLVE-RLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVD 256
KT E R+ N + +++ PLQ P++VA+ V +L PAA ITG + VD
Sbjct: 179 GTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVD 238
Query: 257 GGFTA 261
GG TA
Sbjct: 239 GGLTA 243
|
Length = 257 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 118 bits (299), Expect = 2e-33
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 8/171 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVE--LNKCLKEWQSKGFVVSGSVCDA 75
T L+TGGT G+G A LA GA + SR + + E ++ G V+ + CD
Sbjct: 2 TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
A D L+ + + G L+ +V+N G P E + E + +++ ++L +
Sbjct: 62 ADRDALAALLAALPAAL-GPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
L L +G+ V SSV G+ + Y A AA++ L + E
Sbjct: 121 LTRDL----DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 4e-33
Identities = 89/253 (35%), Positives = 133/253 (52%), Gaps = 17/253 (6%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSG 70
+SLK +VTG RGIG+A LA G+ VV+ R E E+N+ LK + G G
Sbjct: 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAE-EMNETLKMVKENGGEGIG 60
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
+ D ++ + E L + ++ G +ILVNN G + P + + K ++T+F+S
Sbjct: 61 VLADVSTREGCETLAKATIDRY-GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSV 119
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ Q + ++ G +IV I+SV G+ SIYGA KAA+ LT+ LA E A I
Sbjct: 120 IYCSQELAKEMREGG--AIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KI 176
Query: 191 RTNSVAPWYTKTSLVERL-----LENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
R N++AP + KT L E L + KEF +K T + ++ +PEEVA VA +
Sbjct: 177 RVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKF---TLMGKILDPEEVAEFVAAIL--KI 231
Query: 246 SYITGQIISVDGG 258
ITGQ+ +D G
Sbjct: 232 ESITGQVFVLDSG 244
|
Length = 252 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 4e-33
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 4/199 (2%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
L+TG + GIG A LA G V +RN +L + V+ D
Sbjct: 2 VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLE---LDVTDE 58
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ + ++EV +F G++++LVNN G + P E S EE ++ N + +
Sbjct: 59 ESIKAAVKEVIERF-GRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFL 117
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
PL++ G G IV +SSV GL Y A+KAA+ L+ +L E A I+ + P
Sbjct: 118 PLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEPG 177
Query: 199 YTKTSLVERLLENKEFVDK 217
+T + + +
Sbjct: 178 PVRTGFADNAAGSALEDPE 196
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 6e-33
Identities = 77/250 (30%), Positives = 125/250 (50%), Gaps = 15/250 (6%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
G AL+T +GIG+A A GA V NE +L + +G ++ V D
Sbjct: 1 DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKEL-----ERGPGITTRVLDV 55
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+Q L +E G ++++L N G ++ +++ M N S Y + +
Sbjct: 56 TDKEQVAALAKEEG-----RIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIK 110
Query: 136 LVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
V P + A GSI+ +SSV + V + +Y TKAA+ LT+++A ++A+ IR N+
Sbjct: 111 AVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNA 170
Query: 195 VAPWYTKT-SLVERLLEN---KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
+ P T SL ER+ +E + AR PL R+ PEEVA+L YL ++Y+TG
Sbjct: 171 ICPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESAYVTG 230
Query: 251 QIISVDGGFT 260
+ +DGG++
Sbjct: 231 TAVVIDGGWS 240
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (301), Expect = 8e-33
Identities = 90/258 (34%), Positives = 144/258 (55%), Gaps = 20/258 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQS---KGFVVS 69
+L G ALVTG +RGIG+A LA GA+V RN+ ++ ++E +S K F++
Sbjct: 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIE 62
Query: 70 GSVCDAASPDQREKLIQEVGSKFN-----GKLNILVNNVGTNIRKPTIEYSAEE-YSKIM 123
D S D +KL++++ ++ +++ILVNN G + TIE + EE + +IM
Sbjct: 63 A---DLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQG-TIENTTEEIFDEIM 118
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGSI-YGATKAAMNQLTRNL 181
N ++ + L Q PLL+A G ++ ISS +G +GSI YG +K A+N +T L
Sbjct: 119 AVNIKAPFFLIQQTLPLLRAEG--RVINISSAE--VRLGFTGSIAYGLSKGALNTMTLPL 174
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
A + I N++ P YTKT + +LL++ E + + R+G+ E++A VA+L
Sbjct: 175 AKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLA 234
Query: 242 LPAASYITGQIISVDGGF 259
+ ++TGQII V GGF
Sbjct: 235 SSDSRWVTGQIIDVSGGF 252
|
Length = 254 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 8e-33
Identities = 73/245 (29%), Positives = 109/245 (44%), Gaps = 13/245 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL+G +TGG G+G+AT LA GA V R L++ L + + G
Sbjct: 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG--I 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D P + + EV +F G+L+ LVN G + + A+ + ++ N ++T +
Sbjct: 62 DLVDPQAARRAVDEVNRQF-GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNA 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P L ASG G IV I + L Y A KA + +LT LA E I N
Sbjct: 121 SKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVN 180
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253
+V P T + + +F R PE++A+++A+L A ITG I
Sbjct: 181 AVLPSIIDTPPNRADMPDADF----------SRWVTPEQIAAVIAFLLSDEAQAITGASI 230
Query: 254 SVDGG 258
VDGG
Sbjct: 231 PVDGG 235
|
Length = 239 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 8e-33
Identities = 81/265 (30%), Positives = 121/265 (45%), Gaps = 29/265 (10%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE--WQSKGFVVSGSV 72
L+G A+VTGG+ GIG ATVE L GA V C R+E L + G + +
Sbjct: 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD V ++F G +++LVNN G + + + + + + S +
Sbjct: 66 CDVLDEADVAAFAAAVEARF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVIN 124
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLS---HVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ PLL+AS SIV ++S+ L H+ + S A +A + L ++LA E A
Sbjct: 125 PTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATS---AARAGLLNLVKSLATELAPKG 181
Query: 190 IRTNSVAPWYTKTSLVE-----RLLENKEFVDK-------VIART---PLQRVGEPEEVA 234
+R NS+ LVE R E + + +AR PL R+G P+E A
Sbjct: 182 VRVNSIL-----LGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAA 236
Query: 235 SLVAYLCLPAASYITGQIISVDGGF 259
+ +L P +SY TG I V GGF
Sbjct: 237 RALFFLASPLSSYTTGSHIDVSGGF 261
|
Length = 265 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 2e-32
Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 20/257 (7%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
G +VTG +GIG+ A GA V R+E+ +++ E ++ G D
Sbjct: 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADL 65
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLC 134
+ + + F G++++L+NNVG I KP EY E+ + + T C
Sbjct: 66 ETYAGAQAAMAAAVEAF-GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCC 124
Query: 135 QLVYPLLKASGVGSIVFISSV--GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ V P + A G G+IV +SS+ G++ V Y A K +N LT +LA E+A+ IR
Sbjct: 125 RAVLPHMLAQGGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAFEYAEHGIRV 180
Query: 193 NSVAPWYTK--TSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
N+VAP T+ V R ++ VD+ + + ++R G +E + + +L
Sbjct: 181 NAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLA 240
Query: 242 LPAASYITGQIISVDGG 258
ASYITG ++ V GG
Sbjct: 241 SDEASYITGTVLPVGGG 257
|
Length = 260 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 2e-32
Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL----NKCLKEWQSKGFVVSG 70
L+G ++TG + GIG+ LA LGA + +R E L ++CL+ VV
Sbjct: 1 LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D + + E++++E F G L+IL+NN G ++R + S + KIM N+
Sbjct: 61 ---DMSDLEDAEQVVEEALKLF-GGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGP 116
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
L + P L GSIV +SS+ G V + Y A+K A+ +L E ++ NI
Sbjct: 117 VALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNI 176
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGE-PEEVASLV 237
V P T++ L G PEE A +
Sbjct: 177 SVTVVCPGLIDTNIAMNALSGD--GSMSAKMDDTTANGMSPEECALEI 222
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 3e-32
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 16/245 (6%)
Query: 24 GGTRGIGQATVEELAGLGAVV----HTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
I A + A GA V + +++ KE + V+ D S +
Sbjct: 3 ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPAD--VI---PLDVTSDE 57
Query: 80 QREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
++L ++V GK++ LV+++ KP ++ S E + K + + S L +
Sbjct: 58 DIDELFEKVKEDG-GKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAK 116
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
PL+ G SIV +S + G KAA+ L R LA E + IR N++
Sbjct: 117 AAKPLMNEGG--SIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNTI 174
Query: 196 APWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255
+ TKT+ + + V+ PL R EEVA+ A+L A ITGQI+ V
Sbjct: 175 SAGPTKTTAGSGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLSDLARGITGQILYV 234
Query: 256 DGGFT 260
DGGF+
Sbjct: 235 DGGFS 239
|
Length = 239 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 5e-32
Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVVS 69
L+G ++TGG+ G+G+A A VV +E E N +E + G V
Sbjct: 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
G D LIQ +F G L++++NN G P+ E S E+++K++ TN
Sbjct: 64 G---DVTVESDVVNLIQTAVKEF-GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTG 119
Query: 130 TYHLCQ--LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+ + + Y ++ G+I+ +SSV Y A+K + +T LA E+A
Sbjct: 120 AFLGSREAIKY-FVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAP 178
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
IR N++ P T + + + V + P+ +G+PEE+A++ A+L ASY
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASY 238
Query: 248 ITGQIISVDGGFT 260
+TG + DGG T
Sbjct: 239 VTGITLFADGGMT 251
|
Length = 261 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 5e-32
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 16/255 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A++TGG GIG+AT A GA V ++ E +S CD
Sbjct: 2 LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPD--ISFVHCD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTN----FE 128
+ ++F G+L+I+ NN G +E S EE+ +++ N F
Sbjct: 60 VTVEADVRAAVDTAVARF-GRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFL 118
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
T H +++ P + GSIV ++SV G+ Y A+K A+ LTR+ A E +
Sbjct: 119 GTKHAARVMIP----AKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEH 174
Query: 189 NIRTNSVAPWYTKTSLV-ERLLENKEFVDKVI--ARTPLQRVGEPEEVASLVAYLCLPAA 245
IR N V+P+ T L+ E +++ + A PE++A+ V YL +
Sbjct: 175 GIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDS 234
Query: 246 SYITGQIISVDGGFT 260
Y++GQ + VDGG T
Sbjct: 235 RYVSGQNLVVDGGLT 249
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 8e-32
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 21/244 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
T LVTG T+GIG A LA LG V +R+ ++ F CD A
Sbjct: 5 TVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----------DFPGELFACDLADI 53
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+Q + ++ ++ +VNNVG + +P + + N + + Q
Sbjct: 54 EQTAATLAQINEIH--PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFL 111
Query: 139 PLLKASGVGSIVFISS---VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
+K G IV I S G L + Y A K+A+ TR A E A+ I N+V
Sbjct: 112 EGMKLREQGRIVNICSRAIFGALDR----TSYSAAKSALVGCTRTWALELAEYGITVNAV 167
Query: 196 APWYTKTSLV-ERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
AP +T L + E +V+A P++R+G PEEVA+ +A+L A +ITGQ++
Sbjct: 168 APGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLG 227
Query: 255 VDGG 258
VDGG
Sbjct: 228 VDGG 231
|
Length = 234 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 9e-32
Identities = 71/249 (28%), Positives = 105/249 (42%), Gaps = 12/249 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
LVTG +RG+G A A GA VV R+ E + + V D
Sbjct: 2 VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRD--- 58
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNV------GTNIRKPTIEYSAEEYSKIMTTNFESTY 131
DQ + +I+E + F G ++ +VNN + RK E+Y + + +
Sbjct: 59 RDQVQAMIEEAKNHF-GPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+L Q V P K G G ++ I + + V Y KAA+ TRN+A E I
Sbjct: 118 NLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGIT 177
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N V+ K + KE D + TPL +V P+++A V + P A +TGQ
Sbjct: 178 VNMVSGGLLKVTDASAA-TPKEVFDAIAQTTPLGKVTTPQDIADAVLFFASPWARAVTGQ 236
Query: 252 IISVDGGFT 260
+ VDGG
Sbjct: 237 NLVVDGGLV 245
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 9e-32
Identities = 81/249 (32%), Positives = 122/249 (48%), Gaps = 6/249 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW--QSKGFVVSGS 71
S + T LVTGG GIG+ L GA V RN +L +E V
Sbjct: 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYE 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFEST 130
D DQ + + + ++G+L+ +V+ G + P + ++ + + + N T
Sbjct: 64 PADVTDEDQVARAVDAATA-WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGT 122
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
++ + L G GS V ISS+ +H G+ YG TK+A++ L + A E
Sbjct: 123 MYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGA-YGVTKSAVDHLMKLAADELGPSW 181
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
+R NS+ P +T LV + E+ E A TPL RVGE E+VA+L +L AAS+IT
Sbjct: 182 VRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWIT 241
Query: 250 GQIISVDGG 258
GQ+I+VDGG
Sbjct: 242 GQVINVDGG 250
|
Length = 276 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 1e-31
Identities = 72/249 (28%), Positives = 102/249 (40%), Gaps = 23/249 (9%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKG---FVVSGSVCDA 75
A++TGG GIG AT + L GA V RNE L+ K FV CD
Sbjct: 3 AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFV----QCDV 58
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS--KIMTTNFESTYHL 133
S +Q ++ KF G+++IL+NN G K + K + N +
Sbjct: 59 TSWEQLAAAFKKAIEKF-GRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINT 117
Query: 134 CQLVYPLLKAS---GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW-AKDN 189
L + + G IV I SV GL +Y A+K + TR+LA K
Sbjct: 118 TYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTG 177
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
+R N++ P +T T L+ + +++ P Q PE VA + YL
Sbjct: 178 VRVNAICPGFTNTPLLP---DLVAKEAEMLPSAPTQ---SPEVVAKAIVYLIEDDEK--N 229
Query: 250 GQIISVDGG 258
G I VDGG
Sbjct: 230 GAIWIVDGG 238
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 1e-31
Identities = 80/252 (31%), Positives = 131/252 (51%), Gaps = 8/252 (3%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+SL+G A+VTG G+GQ LA G + N VE + +++ + G
Sbjct: 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDI--VGINIVEPTETIEQVTALGRRFLSLT 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D D L++ ++F G ++ILVNN G R+ IE+S +++ +M N +S +
Sbjct: 64 ADLRKIDGIPALLERAVAEF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFF 122
Query: 133 LCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDN 189
+ Q A G G I+ I+S+ LS G + Y A+K+ + +TR +A EWAK N
Sbjct: 123 MSQAAAKHFIAQGNGGKIINIASM--LSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHN 180
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
I N++AP Y T+ ++L +++ +++ R P R G P ++ V +L A+ YI
Sbjct: 181 INVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYIN 240
Query: 250 GQIISVDGGFTA 261
G I+VDGG+ A
Sbjct: 241 GYTIAVDGGWLA 252
|
Length = 253 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 2e-31
Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 21/264 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-------------VVHTCSRNEVELNKCLKEW 61
L+G A +TG RG G+A LA GA +L++ +
Sbjct: 1 LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60
Query: 62 QSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
++ G V D + ++++ +F G+L+++V N G + E S E++
Sbjct: 61 EALGRKVLARKADVRDLAEVRAVVEDGVEQF-GRLDVVVANAGVLSYGRSWELSEEQWDT 119
Query: 122 IMTTNFESTYHLCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
++ N + C+ V P +++ GSI+ SSV GL + + Y A K + LT+
Sbjct: 120 VLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKT 179
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVER------LLENKEFVDKVIARTPLQRVGEPEEVA 234
LA E A+ IR NS+ P+ T ++ L+ E + P+ PE+VA
Sbjct: 180 LANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPEDVA 239
Query: 235 SLVAYLCLPAASYITGQIISVDGG 258
V +L + YITG + VD G
Sbjct: 240 DAVLWLASDESRYITGHQLPVDAG 263
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 4e-31
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 11/255 (4%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVV 68
+ L G A VTG GIGQ LA GA V R + L + + ++ G +
Sbjct: 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQI 63
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
+ V A + ++ G L + VN G P E E++ +M N
Sbjct: 64 AADVTSKADLRAA---VARTEAEL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLT 119
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVG-SGSIYGATKAAMNQLTRNLACEWA 186
+ CQ + +G GSIV I+S+ G + + G + Y A+KA + L+++LA EW
Sbjct: 120 GVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWV 179
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
IR NS++P YT T + R E +TP+QR+ + +E+ +L AAS
Sbjct: 180 GRGIRVNSISPGYTATPMNTR-PEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAAS 238
Query: 247 YITGQIISVDGGFTA 261
+ TG + VDGGF
Sbjct: 239 FCTGVDLLVDGGFVC 253
|
Length = 254 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 4e-31
Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ G T VTG +GIG A GA V + + + +
Sbjct: 1 MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE---------DYPFA 51
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
V D + ++ Q + ++ G L++LVN G T S E++ + N
Sbjct: 52 TFVLDVSDAAAVAQVCQRLLAE-TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGG 110
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEWAK 187
++L + V P + G+IV + S +HV + YGA+KAA+ L + + E A
Sbjct: 111 AFNLFRAVMPQFRRQRSGAIVTVGS--NAAHVPRIGMAAYGASKAALTSLAKCVGLELAP 168
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIA------RT--PLQRVGEPEEVASLVAY 239
+R N V+P T T + L +++ +VIA + PL ++ P+E+A+ V +
Sbjct: 169 YGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLF 228
Query: 240 LCLPAASYITGQIISVDGGFT 260
L AS+IT Q I VDGG T
Sbjct: 229 LASDLASHITLQDIVVDGGAT 249
|
Length = 252 |
| >gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 7e-31
Identities = 82/268 (30%), Positives = 116/268 (43%), Gaps = 25/268 (9%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G AL+TGG GIG+A VE GA V R+ +L + + VV G D
Sbjct: 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEG---D 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYSKIMTTNFES 129
S ++ + + F GKL+ V N G T++ E + +I N +
Sbjct: 61 VTSYADNQRAVDQTVDAF-GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKG 119
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ P LKASG GS++F S G G +Y A+K A+ L R LA E A
Sbjct: 120 YLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK- 177
Query: 190 IRTNSVAPWYTKTSLV---------ERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
IR N VAP T T L + ++ D + A TPLQ +PE+ Y+
Sbjct: 178 IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTG--PYV 235
Query: 241 CLPA---ASYITGQIISVDGGFTANGFN 265
L + + +TG +I+ DGG G
Sbjct: 236 LLASRRNSRALTGVVINADGGLGIRGIR 263
|
Length = 263 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 1e-30
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 11/231 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL+G AL+TG RGIG+A LA G V +R E L +E ++ G V +
Sbjct: 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + ++ I+++ ++ G ++IL+NN G + +E E+ KI+ N Y+
Sbjct: 64 DVSDYEEVTAAIEQLKNEL-GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYA 122
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ V P + G I+ ISS G S Y A+K + LT +L E K NIR
Sbjct: 123 TRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVT 182
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASL-VAYLCLP 243
++ P T + L + P +V +PE++A VA L L
Sbjct: 183 ALTPSTVATDMAVDL--------GLTDGNP-DKVMQPEDLAEFIVAQLKLN 224
|
Length = 239 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 2e-30
Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 15/254 (5%)
Query: 18 MTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
ALVTGG RGIG LA G + ++ EL +E ++ G V D A
Sbjct: 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNN--VGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
E ++ + + G+++ LVNN VG +R ++ + E + +++ N + L
Sbjct: 63 DLSAHEAMLDAAQAAW-GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121
Query: 135 QLVYP-LLKASG-----VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
Q V +L SIVF+SSV + + Y +KA ++ + A A++
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEE 181
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR--TPLQRVGEPEEVASLVAYLCLPAAS 246
I V P KT + + D +IA+ P+ R GEPE+VA VA L
Sbjct: 182 GIGVYEVRPGLIKTDMTAPV---TAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLP 238
Query: 247 YITGQIISVDGGFT 260
Y TGQ I VDGG +
Sbjct: 239 YSTGQAIHVDGGLS 252
|
Length = 256 |
| >gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 3e-30
Identities = 73/259 (28%), Positives = 110/259 (42%), Gaps = 19/259 (7%)
Query: 14 SLKGMTALVTGGTR--GIGQATVEELAGLGAVV--HTCSRNEVELNKCL---------KE 60
L ALVTG +R GIG A LA G + S + + + +E
Sbjct: 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
+S G D + P ++ V + G +IL+NN + E +AE+
Sbjct: 62 IESYGVRCEHMEIDLSQPYAPNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLD 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
K N +T L G I+ ++S L + Y ATK A+ T++
Sbjct: 121 KHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKS 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LA E A+ I N+V P T T + +E ++ + P RVGEP + A L+A+L
Sbjct: 181 LAPELAEKGITVNAVNPGPTDTGWI-----TEELKHHLVPKFPQGRVGEPVDAARLIAFL 235
Query: 241 CLPAASYITGQIISVDGGF 259
A +ITGQ+I +GGF
Sbjct: 236 VSEEAKWITGQVIHSEGGF 254
|
Length = 256 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 5e-30
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 16/253 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G ALVTGGT+G+G A A GA + C RN + E ++ G
Sbjct: 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + + +++ F G+L+ LVN G R ++ S E + + N + + L
Sbjct: 64 DLSDVEDCRRVVAAADEAF-GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFL 122
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNI 190
Q L++ G+IV I S+ +H G + Y A+K A+ LTRN A ++ I
Sbjct: 123 MQEAIKLMRRRKAEGTIVNIGSMS--AHGGQPFLAAYCASKGALATLTRNAAYALLRNRI 180
Query: 191 RTNSVAPWYTKTSLVERLLENKEF-------VDKVIARTPLQRVGEPEEVASLVAYLCLP 243
R N + + T E ++ +EF ++K A P R+ +P+EVA VA+L
Sbjct: 181 RVNGLNIGWMATE-GEDRIQ-REFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSD 238
Query: 244 AASYITGQIISVD 256
+ +TG +I D
Sbjct: 239 ESGLMTGSVIDFD 251
|
Length = 260 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 6e-30
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 13/223 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG +RGIG LA G V RN +L L V DA P
Sbjct: 2 VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDL-AALSASGGDVEAVP---YDARDP 57
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ L+ + +F G++++LV+N G E S E + N + L + +
Sbjct: 58 EDARALVDALRDRF-GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P L+ +G G +VF++S+ G + + Y A+K A+ L L E +R ++V P
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPG 176
Query: 199 YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
+ T + + L + P + + +P+++A+LV +
Sbjct: 177 FVDTPMAQGLTL--------VGAFPPEEMIQPKDIANLVRMVI 211
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 6e-30
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 10/242 (4%)
Query: 21 LVTGGTRGIGQATVEELA--GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
LVTG +RGIG+A LA G VH + + Q++G D A
Sbjct: 2 LVTGASRGIGRAIANRLAADGFEICVH-YHSGRSDAESVVSAIQAQGGNARLLQFDVADR 60
Query: 79 DQ-REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ-L 136
R L ++ +G +V N G S E++ ++ TN + Y++
Sbjct: 61 VACRTLLEADIAE--HGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPC 118
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
P+++A G I+ ++SV G+ Y A KA + T+ LA E AK I N +A
Sbjct: 119 TMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIA 178
Query: 197 PWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVD 256
P T ++ E + +D+ + P+ R+G+P EVASL +L ASY+T Q+ISV+
Sbjct: 179 PGLIDTEMLA---EVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVN 235
Query: 257 GG 258
GG
Sbjct: 236 GG 237
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 7e-30
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 23/256 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQSKGFVVSGSVC 73
A+VTG +RGIG+A ELA G + + + + + L G
Sbjct: 3 VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAA----GRRAIYFQA 58
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
D E L+ + F G+L+ LVNN G +R ++ + + + +++ N +
Sbjct: 59 DIGELSDHEALLDQAWEDF-GRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPF 117
Query: 132 HLCQLV------YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
L Q V P SI+F++S+ + Y +KA ++ TR LA
Sbjct: 118 FLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRL 177
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIA--RTPLQRVGEPEEVASLVAYLCLP 243
A + I + + P T + + KE D++IA P++R G+PE++A V L
Sbjct: 178 ADEGIAVHEIRPGLIHTDMTAPV---KEKYDELIAAGLVPIRRWGQPEDIAKAVRTLASG 234
Query: 244 AASYITGQIISVDGGF 259
Y TGQ I++DGG
Sbjct: 235 LLPYSTGQPINIDGGL 250
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 111 bits (281), Expect = 7e-30
Identities = 78/245 (31%), Positives = 113/245 (46%), Gaps = 17/245 (6%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA--VVH--TCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
ALVTG + IG+A E LA G VVH L L ++ +V + D
Sbjct: 2 VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLSD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A+ L+ F G+ ++LVNN P + S + ++++ N ++ Y L
Sbjct: 62 FAA---CADLVAAAFRAF-GRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLI 117
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIRTN 193
Q L S GSI+ I +G Y +KAA+ LTR+ A E A NIR N
Sbjct: 118 QAFARRLAGSRNGSIINII-DAMTDRPLTGYFAYCMSKAALEGLTRSAALELAP-NIRVN 175
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253
+AP L E + + E+ + + + PL+R EE+A V +L +YITGQII
Sbjct: 176 GIAP--GLILLPEDM--DAEYRENALRKVPLKRRPSAEEIADAVIFLLDS--NYITGQII 229
Query: 254 SVDGG 258
VDGG
Sbjct: 230 KVDGG 234
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 1e-29
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL----NKCLKEWQSKGFVVSGSV 72
G L+TGG+ GIG+A +EL GA V +R+E +L + E + G VS
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + ++ E+ + K G +++VN G +I + +AEE+ + M N+ + +
Sbjct: 61 ADLSDYEEVEQAFAQAVEKG-GPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLN 119
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ V PL+K G IVF+SS L + S Y +K A+ L +L E NIR
Sbjct: 120 VAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRV 179
Query: 193 NSVAPWYTKTSLVERLLENK 212
+ V P T T E ENK
Sbjct: 180 SVVYPPDTDTPGFEE--ENK 197
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 3e-29
Identities = 80/264 (30%), Positives = 127/264 (48%), Gaps = 32/264 (12%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSGS 71
L+G ALVTG + G+G + LA GA V SR L + E +++G VVS
Sbjct: 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66
Query: 72 VCDAASPDQREKLIQ--------EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
V D S I+ E G+ ++ILVNN G + + ++ + ++ +
Sbjct: 67 VTDYQS-------IKAAVAHAETEAGT-----IDILVNNSGVSTTQKLVDVTPADFDFVF 114
Query: 124 TTNFESTYHLCQLVYP--LLKASGVGS------IVFISSVGGLSHVGSGSIYGATKAAMN 175
TN + + Q V + +A G G+ I+ I+SV GL + +Y +KAA+
Sbjct: 115 DTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVV 174
Query: 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVAS 235
+TR +A EW + I N++ P Y T + E E K+++ P +RVG+PE++
Sbjct: 175 HMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET-EQGQKLVSMLPRKRVGKPEDLDG 233
Query: 236 LVAYLCLPAASYITGQIISVDGGF 259
L+ L + +I G IIS D GF
Sbjct: 234 LLLLLAADESQFINGAIISADDGF 257
|
Length = 258 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 5e-29
Identities = 65/258 (25%), Positives = 102/258 (39%), Gaps = 30/258 (11%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW-----QSKGFVVSGS 71
G ++TG GIG+ T ELA GA V RNE K + ++ V
Sbjct: 1 GKVVVITGANSGIGKETARELAKRGAHVIIACRNE---EKGEEAAAEIKKETGNAKVEVI 57
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D +S + +E ++F +L+IL+NN G P + + + N+ +
Sbjct: 58 QLDLSSLASVRQFAEEFLARFP-RLDILINNAGIMA--PPRRLTKDGFELQFAVNYLGHF 114
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGG---------LSHVGSGS-----IYGATKAAMNQL 177
L L+ P+LKAS IV +SS+ L + YG +K A
Sbjct: 115 LLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILF 174
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLV 237
TR LA + N++ P +T L+ R F+ + R P + PE+ A
Sbjct: 175 TRELARRLEGTGVTVNALHPGVVRTELLRR--NGSFFLLYKLLR-PFLKKS-PEQGAQTA 230
Query: 238 AYLCL-PAASYITGQIIS 254
Y P ++G+ S
Sbjct: 231 LYAATSPELEGVSGKYFS 248
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 2e-28
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 3/184 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLKG AL+TGG++GIG A E L G V +R++ EL + E +KG V+ G
Sbjct: 3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVL-GLAA 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D ++ + + + F G L++L+ N G P E + EE+ ++ TN ++
Sbjct: 62 DVRDEADVQRAVDAIVAAF-GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYT 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P LK G G I+ ISS+ G + G+ Y A+K + + + + I+ +
Sbjct: 121 IKAAVPALKRGG-GYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVS 179
Query: 194 SVAP 197
++ P
Sbjct: 180 TIMP 183
|
Length = 237 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 2e-28
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 21/221 (9%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G T L+TGGT GIG A + G V R E L E + + + V
Sbjct: 2 KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERL----AEAKKELPNIHTIVL 57
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGT----NIRKPTIEYSAEEYSKIMTTNFES 129
D + E L + + S++ L+IL+NN G ++R P + ++ + TN
Sbjct: 58 DVGDAESVEALAEALLSEYP-NLDILINNAGIQRPIDLRDPASD--LDKADTEIDTNLIG 114
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
L + P LK +IV +SS + + +Y ATKAA++ T L +
Sbjct: 115 PIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTG 174
Query: 190 IRTNSVAPWYTKTSLVE----------RLLENKEFVDKVIA 220
+ + P T L E R + EFVD+V+A
Sbjct: 175 VEVVEIVPPAVDTELHEERRNPDGGTPRKMPLDEFVDEVVA 215
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 2e-28
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNN-VGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
A S + E+L+ V G +++LV+N P S + + + L
Sbjct: 53 ALSEQKPEELVDAVLQAG-GAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFAL 111
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q +K +G GSI+FI+S + S+YG +AA L +LA E ++DNI
Sbjct: 112 LQAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVY 171
Query: 194 SVA------PWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
++ P Y TS E N E ++V PL R+G P+E+ +LVA+L A
Sbjct: 172 AIGPNFFNSPTYFPTSDWE---NNPELRERVKRDVPLGRLGRPDEMGALVAFLASRRADP 228
Query: 248 ITGQIISVDGGF 259
ITGQ + GG+
Sbjct: 229 ITGQFFAFAGGY 240
|
Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 2e-28
Identities = 72/250 (28%), Positives = 113/250 (45%), Gaps = 5/250 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK TA+VTGG GIG AT A GA V N K + ++KG CD
Sbjct: 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D + + G +++LVNN G + P + + +++ N H+
Sbjct: 61 ITDRDSVDTAVAAAEQAL-GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMH 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
V P + G G IV I+S ++Y A K + ++ +A E A+ I N
Sbjct: 120 HAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNV 179
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIA----RTPLQRVGEPEEVASLVAYLCLPAASYITG 250
V P T T+L++ + E +K+ PL R+G+P+++ + + AS+ITG
Sbjct: 180 VCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITG 239
Query: 251 QIISVDGGFT 260
Q++SV GG T
Sbjct: 240 QVLSVSGGLT 249
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 6e-28
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 10/253 (3%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
+ L G A++TG G+GQ LA GA +V E ++ K ++
Sbjct: 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITAD 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
+ + ++ + + G ++IL+NN G R+ +E+ +++ ++ N ++ +
Sbjct: 64 LIQQ---KDIDSIVSQ-AVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVF 119
Query: 132 HLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKD 188
L Q V G G I+ I+S+ LS G + Y A+K+A+ LTR LA E ++
Sbjct: 120 FLSQAVAKQFVKQGNGGKIINIASM--LSFQGGIRVPSYTASKSAVMGLTRALATELSQY 177
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
NI N++AP Y T L + + ++ R P R G P+++A +L A+ Y+
Sbjct: 178 NINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYV 237
Query: 249 TGQIISVDGGFTA 261
TG ++VDGG+ A
Sbjct: 238 TGYTLAVDGGWLA 250
|
Length = 251 |
| >gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 8e-28
Identities = 74/253 (29%), Positives = 112/253 (44%), Gaps = 14/253 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A++TGG GIG AT LA GA V + E K + FV D
Sbjct: 5 LAGRVAVITGGGSGIGLATARRLAAEGATV-VVGDIDPEAGKAAADEVGGLFVP----TD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKP----TIEYSAEEYSKIMTTNFEST 130
D L + G ++I NN G I P + + + ++ N S
Sbjct: 60 VTDEDAVNALFDTAAETY-GSVDIAFNNAG--ISPPEDDSILNTGLDAWQRVQDVNLTSV 116
Query: 131 YHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
Y C+ P + G GSI+ +S V + S Y A+K + ++R L ++A+
Sbjct: 117 YLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQG 176
Query: 190 IRTNSVAPWYTKTSLVERLL-ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
IR N++ P T L++ L ++ E + + P+ R EPEE+A+ VA+L AS+I
Sbjct: 177 IRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFI 236
Query: 249 TGQIISVDGGFTA 261
T VDGG +
Sbjct: 237 TASTFLVDGGISG 249
|
Length = 255 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 9e-28
Identities = 71/256 (27%), Positives = 128/256 (50%), Gaps = 20/256 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK ++TGG +G+G+A E LA GA + N+ +L + + E + G V G +
Sbjct: 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR----------KPTIEYSAEEYSKIMT 124
+ E ++ F G+LN L+NN G +R K T + S E++ ++
Sbjct: 63 VTDEEDVEATFAQIAEDF-GQLNGLINNAGI-LRDGLLVKAKDGKVTSKMSLEQFQSVID 120
Query: 125 TNFESTYHLC--QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
N + LC + ++++ G I+ ISS+ ++G + Y A+KA + +T A
Sbjct: 121 VNLTGVF-LCGREAAAKMIESGSKGVIINISSIARAGNMGQ-TNYSASKAGVAAMTVTWA 178
Query: 183 CEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
E A+ IR ++AP +T + + E ++++ P+ R+GEPEE+A V ++
Sbjct: 179 KELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRFII- 235
Query: 243 PAASYITGQIISVDGG 258
Y+TG+++ +DGG
Sbjct: 236 -ENDYVTGRVLEIDGG 250
|
Length = 253 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 1e-27
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 8/245 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ALVTG + GIG+ L GA+V +L E + + ++ D
Sbjct: 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD 63
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D+ + L Q+ + G ++ILVNN G + S E++ ++ N +T+ L
Sbjct: 64 R---DEVKALGQKAEADLEG-VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLT 119
Query: 135 -QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+L +P+++ G I+ I+SV G++ + Y A+KA M +++LA E A N+ N
Sbjct: 120 RELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVN 178
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253
VAP + ++++ +L N + + ++ P++R+G EVAS VAYL A+Y+TGQ I
Sbjct: 179 CVAPGFIESAMTGKL--NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTI 236
Query: 254 SVDGG 258
V+GG
Sbjct: 237 HVNGG 241
|
Length = 245 |
| >gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-27
Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 9/254 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
+KG T +++GGTRGIG+A V E A G + T + N E NK ++ + K G
Sbjct: 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYP 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK------PTIEYSAEEYSKIMTTN 126
+ P+ ++L +++ F+ +++ ++N + R + + + I T
Sbjct: 66 LNILEPETYKELFKKIDEDFD-RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTAT 124
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
+ Q ++ G GSI+ +SS G L ++ + + +G +KAA+ + + A E
Sbjct: 125 VNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELG 184
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
+ NIR N+V+ T ++ +E K +PL R+G+PE++A +LC AS
Sbjct: 185 EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKAS 244
Query: 247 YITGQIISVDGGFT 260
++TGQ I VDGG T
Sbjct: 245 WLTGQTIVVDGGTT 258
|
Length = 260 |
| >gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 2e-27
Identities = 70/241 (29%), Positives = 124/241 (51%), Gaps = 4/241 (1%)
Query: 20 ALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
A VTGG GIG + + L G VV C N K L++ ++ GF S +
Sbjct: 6 AYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW 65
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
D + +V ++ G++++LVNN G + + E+++ ++ TN S +++ + V
Sbjct: 66 DSTKAAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
+ G G I+ ISSV G + Y KA ++ T +LA E A + N+V+P
Sbjct: 125 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 184
Query: 199 YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258
Y T +V+ + + ++K++A P++R+G P+E+ S+VA+L + + TG S++GG
Sbjct: 185 YIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 242
Query: 259 F 259
Sbjct: 243 L 243
|
Length = 246 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 8e-27
Identities = 62/195 (31%), Positives = 85/195 (43%), Gaps = 13/195 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE----LNKCL--------KEWQ 62
L G A VTG +RGIG+A LA GA V ++ E K L +E +
Sbjct: 1 LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
+ G V D DQ L++ +F G+L+ILVNN G + A+ + +
Sbjct: 61 AAGGQALPIVVDVRDEDQVRALVEATVDQF-GRLDILVNNAGAIWLSLVEDTPAKRFDLM 119
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
N TY L Q P + +G G I+ IS L Y A KA M++LT LA
Sbjct: 120 QRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLA 179
Query: 183 CEWAKDNIRTNSVAP 197
E + I NS+ P
Sbjct: 180 AELRRHGIAVNSLWP 194
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 8e-27
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 9/207 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVC 73
L G ALVTG +RGIG+ +L GA V+ R +L +E +++G C
Sbjct: 1 LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNV-------GTNIRKPTIEYSAEEYSKIMTTN 126
D + D+ E L + V + G+L+ILVNN + KP E + I
Sbjct: 61 DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
+ Y PL+ +G G IV ISS GGL ++ YG KAA++++ ++A E
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYL-FNVAYGVGKAAIDRMAADMAHELK 179
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKE 213
+ S+ P + +T LV + E+ E
Sbjct: 180 PHGVAVVSLWPGFVRTELVLEMPEDDE 206
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 2e-26
Identities = 72/255 (28%), Positives = 106/255 (41%), Gaps = 19/255 (7%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
T LVTGG+RG+G A A GA VV ++E E + + V D
Sbjct: 7 TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDRE- 65
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNV-------GTNIRKPTIEYSAEEYSKIMTTNFEST 130
Q + + F + +VNN G RK + + E++ + + + +
Sbjct: 66 --QVQAMFATATEHFGKPITTVVNNALADFSFDGDA-RKKADDITWEDFQQQLEGSVKGA 122
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ Q P ++ G G I+ I + + V Y KAA+ LTRNLA E I
Sbjct: 123 LNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGI 182
Query: 191 RTNSVAPWYTKT---SLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
N V+ +T S E D + A TPL++V P+E A V + P A
Sbjct: 183 TVNMVSGGLLRTTDASAAT----PDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARA 238
Query: 248 ITGQIISVDGGFTAN 262
+TGQ + VDGG N
Sbjct: 239 VTGQNLVVDGGLVMN 253
|
Length = 253 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 4e-26
Identities = 83/250 (33%), Positives = 118/250 (47%), Gaps = 16/250 (6%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVV----HTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
ALVTGG+RGIG+AT LA G V E+ + + K FV+ + D
Sbjct: 3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFESTYHL 133
I + L LVNN G + T+E +AE +++++TN + Y L
Sbjct: 63 ENQVVAMFTAIDQHD----EPLAALVNNAGILFTQCTVENLTAERINRVLSTNV-TGYFL 117
Query: 134 C--QLVYPLLKASGV--GSIVFISSVGG-LSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
C + V + G G+IV +SS L G Y A+K A++ LT L+ E A
Sbjct: 118 CCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQ 177
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
IR N V P + T + E VD+V + P+QR G+PEEVA + +L ASY+
Sbjct: 178 GIRVNCVRPGFIYTEMHASGGEPGR-VDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYV 236
Query: 249 TGQIISVDGG 258
TG I + GG
Sbjct: 237 TGSFIDLAGG 246
|
Length = 247 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 5e-26
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
ALVTG +RGIG+AT L G V C+R+E L + V G D
Sbjct: 3 ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG---VLGLAGDVRDEA 59
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
+ + + F G L+ LVNN G + KP E + EE+ ++ TN ++ P
Sbjct: 60 DVRRAVDAMEEAF-GGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
L G G+IV + S+ G + G+ Y A+K + L+ + + NIR +V P
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMP 176
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 9e-26
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 11/228 (4%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC-DAA 76
T L+TG + GIG+AT A GA + R L + E +K V + D +
Sbjct: 1 KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+ E ++ + +F ++ILVNN G + P E E++ ++ TN + ++ +
Sbjct: 61 DRESIEAALENLPEEF-RDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTR 119
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L+ P++ A G I+ + S+ G G++Y ATKAA+ Q + NL + IR ++
Sbjct: 120 LILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTNI 179
Query: 196 APWYTKT--SLVERLLENKEFVDKVIART-PLQRVGEPEEVASLVAYL 240
P +T SLV R +KE DKV PL PE++A + ++
Sbjct: 180 EPGLVETEFSLV-RFHGDKEKADKVYEGVEPLT----PEDIAETILWV 222
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 9e-26
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 26/258 (10%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
KG+ A+VTGG G+G ATVE L GA V K V V
Sbjct: 1 KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKL-GDNCRFVPVDVTSE 59
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNI------RKPTIEYSAEEYSKIMTTNFES 129
+ + +KF G+L+I+VN G + +K +S E + +++ N
Sbjct: 60 ---KDVKAALALAKAKF-GRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIG 115
Query: 130 TYHLCQLVYPLLKAS--------GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
T+++ +L + + GV I+ +SV + Y A+K + +T +
Sbjct: 116 TFNVIRLAAGAMGKNEPDQGGERGV--IINTASVAAFEGQIGQAAYSASKGGIVGMTLPI 173
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
A + A IR ++AP T L+ L E ++F+ K + R+G+P E A LV ++
Sbjct: 174 ARDLAPQGIRVVTIAPGLFDTPLLAGLPEKVRDFLAKQV--PFPSRLGDPAEYAHLVQHI 231
Query: 241 CLPAASYITGQIISVDGG 258
Y+ G++I +DG
Sbjct: 232 IE--NPYLNGEVIRLDGA 247
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-25
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS-VCD-AAS 77
A+VTG T GIG+A EELA G V SR + +L+ KE + K V + + D +A
Sbjct: 4 AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAG 63
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTYHLCQ 135
D E++ +E+ G ILVNNVG + P +E +E I+ N +T + +
Sbjct: 64 DDIYERIEKELEGLDIG---ILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTR 120
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L+ P + G+IV ISS GL + Y A+KA ++ +R L E+ I S+
Sbjct: 121 LILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSL 180
Query: 196 APWYTKTSL 204
P+ T +
Sbjct: 181 LPYLVATKM 189
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-25
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 8/228 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G ALVTG + GIG+AT LA GA V +R L E +++G D
Sbjct: 1 LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
Q + ++ G+L+ILVNN G + P + ++++++ TN +
Sbjct: 61 VTDEQQVDAAVERTVEAL-GRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTT 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
P G+IV ISSV G V + ++Y ATK +N + L E + +R
Sbjct: 120 HAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVV 179
Query: 195 VAPWYTKTSLVERLLE--NKEFVDKVIAR-TPLQRVGEPEEVASLVAY 239
+ P T L + + KE ++ I+ LQ E++A+ V Y
Sbjct: 180 IEPGTVDTELRDHITHTITKEAYEERISTIRKLQ----AEDIAAAVRY 223
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-25
Identities = 73/249 (29%), Positives = 112/249 (44%), Gaps = 17/249 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
G LV GG+RGIG A V GA V T + ++ + +E +G+
Sbjct: 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE--------TGATA 55
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
R+ +I V G L+ILV N G + +E A++ ++ N + YH
Sbjct: 56 VQTDSADRDAVIDVVRKS--GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHA 113
Query: 134 CQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
V + G I+ I SV G V + Y A+K+A+ + R LA ++ I
Sbjct: 114 S--VEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITI 171
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N V P T K+ + +A ++R G PEEVA +VA+L P AS++TG +
Sbjct: 172 NVVQPGPIDTDANPANGPMKDMMHSFMA---IKRHGRPEEVAGMVAWLAGPEASFVTGAM 228
Query: 253 ISVDGGFTA 261
++DG F A
Sbjct: 229 HTIDGAFGA 237
|
Length = 237 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 3e-25
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G ++TG + GIG+A LA GA + +RNE L +E G D +
Sbjct: 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE-YSKIMTTNFESTYHLCQ 135
+ E+LI+ ++F G ++ILVNN G + E + + ++M N+ +
Sbjct: 61 DAEACERLIEAAVARF-GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTH 119
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
P LKAS G IV +SS+ GL+ V + S Y A+K A++ +L E A D + V
Sbjct: 120 AALPHLKASR-GQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVV 178
Query: 196 APWYTKTSLVERLLENKEFVDKVIARTPLQ--RVGEPEEVASLVAYLCLPAAS 246
P + T + +R L+ K + ++P+Q ++ EE A + LPA +
Sbjct: 179 CPGFVATDIRKRALDGD---GKPLGKSPMQESKIMSAEECAEAI----LPAIA 224
|
Length = 263 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 3e-25
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 14/254 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G AL+TG GIG+A E GA V E VS V
Sbjct: 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR 63
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D ++++ +F G ++IL NN P ++ S + Y ++ N + + L
Sbjct: 64 Q---DSIDRIVAAAVERF-GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLM 119
Query: 135 QLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q V + G G I+ ++S G S Y ATKAA+ T++ A + I N
Sbjct: 120 QAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVN 179
Query: 194 SVAPWYTKTSL---VERLL---ENKEFVDK---VIARTPLQRVGEPEEVASLVAYLCLPA 244
++AP T + V+ L EN+ +K V PL R+G P+++ + +L
Sbjct: 180 AIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASAD 239
Query: 245 ASYITGQIISVDGG 258
A YI Q +VDGG
Sbjct: 240 ADYIVAQTYNVDGG 253
|
Length = 257 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 99.7 bits (249), Expect = 5e-25
Identities = 75/260 (28%), Positives = 112/260 (43%), Gaps = 24/260 (9%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LKG AL+TGG G+G+A VE GA V R+ ++ + ++ V G D
Sbjct: 2 LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEG---D 58
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYSKIMTTNFES 129
S E+ + +F GKL+ + N G T++ E E + ++ N +
Sbjct: 59 VRSLADNERAVARCVERF-GKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKG 117
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ P L A+ GS++F S G G G +Y A+K A+ L + LA E A +
Sbjct: 118 YILGAKAALPALYATE-GSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAP-H 175
Query: 190 IRTNSVAPWYTKTSLV--------ERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
IR N VAP T L E + D + + PL EPE+ AY+
Sbjct: 176 IRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTG--AYVF 233
Query: 242 LPA---ASYITGQIISVDGG 258
L + TG +I+ DGG
Sbjct: 234 LASRGDNRPATGTVINYDGG 253
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 99.0 bits (247), Expect = 1e-24
Identities = 77/255 (30%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
ALVTG +GIG A + L G V NE + G D + D
Sbjct: 5 ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
Q +++V F G LN++VNN G P + E++ K+ N Q
Sbjct: 65 QVFAAVRQVVDTF-GDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123
Query: 140 LLKASGVG-SIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
K G G I+ +S G VG+ ++Y +TK A+ LT+ A + A + I N+ A
Sbjct: 124 AFKKLGHGGKIINATSQAG--VVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYA 181
Query: 197 PWYTKT----SLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
P KT + ++ EN ++F L R+ EPE+VA+ V++L P
Sbjct: 182 PGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAK----DITLGRLSEPEDVANCVSFLAGP 237
Query: 244 AASYITGQIISVDGG 258
+ YITGQ I VDGG
Sbjct: 238 DSDYITGQTIIVDGG 252
|
Length = 256 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 1e-24
Identities = 79/248 (31%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 20 ALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
++TG +RGIG AT A G AV RN ++ + +G D A
Sbjct: 5 MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE 64
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY-SAEEYSKIMTTNFESTYHLC--Q 135
+L + V + G+L+ LVNN G + +E A ++I TN ++ LC +
Sbjct: 65 ADVLRLFEAVDREL-GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSF-LCARE 122
Query: 136 LVYPLLKASGV--GSIVFISSVGGLSHVGSGS---IYGATKAAMNQLTRNLACEWAKDNI 190
V + G G+IV +SS+ + +GS Y A+K A++ +T LA E A + I
Sbjct: 123 AVKRMSTRHGGRGGAIVNVSSMA--ARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGI 180
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
R N+V P T + E VD+V A P+ R G EEVA + +L ASY TG
Sbjct: 181 RVNAVRPGVIYTEIHASGGEPGR-VDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTG 239
Query: 251 QIISVDGG 258
I V GG
Sbjct: 240 TFIDVSGG 247
|
Length = 248 |
| >gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 1e-24
Identities = 70/275 (25%), Positives = 109/275 (39%), Gaps = 60/275 (21%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
T ++TG GIG AT E L G V E V+ D ++P
Sbjct: 1 TIVITGAASGIGAATAELLEDAGHTVIGIDLRE-------------ADVI----ADLSTP 43
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ R I +V ++ +G L+ LVN G ++ N+ L + +
Sbjct: 44 EGRAAAIADVLARCSGVLDGLVNCAGVGGTTVA--------GLVLKVNYFGLRALMEALL 95
Query: 139 PLLKASGVGSIVFISSVGGLS----------------------------HVGSGSIYGAT 170
P L+ + V +SS+ G G Y +
Sbjct: 96 PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGY-LAYAGS 154
Query: 171 KAAMNQLTRNLACEWAKD-NIRTNSVAPWYTKTSLVERLLEN---KEFVDKVIARTPLQR 226
K A+ TR A W +R N+VAP +T +++ L++ E VD + TP+ R
Sbjct: 155 KEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFV--TPMGR 212
Query: 227 VGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261
EP+E+A ++A+L AAS+I G + VDGG A
Sbjct: 213 RAEPDEIAPVIAFLASDAASWINGANLFVDGGLDA 247
|
Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 98.5 bits (245), Expect = 2e-24
Identities = 73/255 (28%), Positives = 110/255 (43%), Gaps = 16/255 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G TAL+TG RGIG+A + GA V N E +S V D
Sbjct: 1 LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
AS D+ + + ++ G ++ILVNN P ++ + E Y ++ N T +
Sbjct: 61 QASIDR---CVAALVDRW-GSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMM 116
Query: 135 QLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q V + A G G I+ ++S G +Y ATKAA+ LT++ + I N
Sbjct: 117 QAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 176
Query: 194 SVAP-------WYTKTSLVERLLENKEFVDK---VIARTPLQRVGEPEEVASLVAYLCLP 243
++AP W + R EN+ +K V P R+G E++ + +L
Sbjct: 177 AIAPGVVDGEHWDGVDAKFARY-ENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLAST 235
Query: 244 AASYITGQIISVDGG 258
A YI Q +VDGG
Sbjct: 236 DADYIVAQTYNVDGG 250
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 2e-24
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
R L G L+TG + GIG+AT ++A GA V +RN L++ + E ++KG
Sbjct: 364 DLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAH 423
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAE---EYSKIMTTN 126
CD + ++++ ++ G ++ LVNN G +IR+ ++E S + +Y + M N
Sbjct: 424 AYTCDLTDSAAVDHTVKDILAEH-GHVDYLVNNAGRSIRR-SVENSTDRFHDYERTMAVN 481
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
+ L + P ++ G +V +SS+G ++ S Y A+KAA++ + A E
Sbjct: 482 YFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETL 541
Query: 187 KDNI----------RTNSVAP 197
D I RT +AP
Sbjct: 542 SDGITFTTIHMPLVRTPMIAP 562
|
Length = 657 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 98.8 bits (246), Expect = 3e-24
Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 16/252 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV-----HTCSRNEVELNKCLKEWQSKGFVVS 69
L+G AL+TG GIG+AT A GA + ++ E+ + ++ K +
Sbjct: 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFE 128
G + D A Q L++ + G L+ILVN G K + + E++ TN
Sbjct: 113 GDLKDEAFCRQ---LVERAVKELGG-LDILVNIAGKQTAVKDIADITTEQFDATFKTNVY 168
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWA 186
+ + LC+ P L SI+ S+ S+ S ++ Y +TKAA+ T+ LA + A
Sbjct: 169 AMFWLCKAAIPHLPPGA--SIINTGSIQ--SYQPSPTLLDYASTKAAIVAFTKALAKQVA 224
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
+ IR N+VAP T L + E + + TP++R G+P E+A L L +S
Sbjct: 225 EKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESS 284
Query: 247 YITGQIISVDGG 258
Y+TG++ V GG
Sbjct: 285 YVTGEVFGVTGG 296
|
Length = 300 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 3e-24
Identities = 80/252 (31%), Positives = 122/252 (48%), Gaps = 20/252 (7%)
Query: 15 LKGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV--VSG 70
L G LVT GT GIG AT GA V +E L + E ++ + V
Sbjct: 15 LAGKVVLVTAAAGT-GIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEA 73
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
VCD S Q + LI + G+L++LVNN G + P ++ + +E+S+++ T
Sbjct: 74 VVCDVTSEAQVDALIDAAVERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGT 132
Query: 131 YHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ + ++A G G IV +SV G + Y A KA + LTR A E A+
Sbjct: 133 FRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYG 192
Query: 190 IRTNSVAP------WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
+R N+VAP + K + E L D++ AR R EP EVA+++A+L
Sbjct: 193 VRINAVAPSIAMHPFLAKVTSAELL-------DELAAREAFGRAAEPWEVANVIAFLASD 245
Query: 244 AASYITGQIISV 255
+SY+TG+++SV
Sbjct: 246 YSSYLTGEVVSV 257
|
Length = 262 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 97.3 bits (242), Expect = 4e-24
Identities = 70/248 (28%), Positives = 105/248 (42%), Gaps = 15/248 (6%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---VELNKCLKEWQSKGFVVSGSVC 73
G A+VTGG GIG+ + G V +E + + F V G
Sbjct: 1 GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGP---NLFFVHG--- 54
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A + ++ + K G++++LVNN + EE+ +I++ N Y L
Sbjct: 55 DVADETLVKFVVYAMLEKL-GRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYEL 113
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ L + G I+ I+S Y A+K + LT LA D IR N
Sbjct: 114 SRYCRDELIKNK-GRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVN 171
Query: 194 SVAP-WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
++P W T E D A+ P RVG P+++A+LV +LC A +ITG+
Sbjct: 172 CISPGWINTTEQQEFTAAPLTQEDH--AQHPAGRVGTPKDIANLVLFLCQQDAGFITGET 229
Query: 253 ISVDGGFT 260
VDGG T
Sbjct: 230 FIVDGGMT 237
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 96.7 bits (240), Expect = 6e-24
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 10/251 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV--HTCSRNEVELNKCLKEWQSKGFVVSGSV 72
LKG ALVTG +RGIG+A + LA GA+V H +R E E + + E QS G
Sbjct: 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIG 60
Query: 73 CDAASPDQREKLIQEVGSKFNG-----KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
+ S E L + ++ K +IL+NN G E + + + ++++ N
Sbjct: 61 ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 120
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
++ + + Q L+ + I+ ISS + Y TK A+N +T LA +
Sbjct: 121 KAPFFIIQQALSRLRDNS--RIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 178
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
I N++ P + KT + LL + + R+GE E++A A+L P + +
Sbjct: 179 RGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW 238
Query: 248 ITGQIISVDGG 258
+TGQ+I V GG
Sbjct: 239 VTGQLIDVSGG 249
|
Length = 252 |
| >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 96.4 bits (240), Expect = 7e-24
Identities = 80/262 (30%), Positives = 117/262 (44%), Gaps = 25/262 (9%)
Query: 14 SLKGMTALVTGGTR--GIGQATVEELAGLGA-------------VVHTCSRNEVELNKCL 58
LK A+VTG +R GIG A +ELA GA + ++E +
Sbjct: 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQ-- 60
Query: 59 KEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE 118
+E G VS D D ++L+ +V + G +ILVNN + +AEE
Sbjct: 61 EELLKNGVKVSSMELDLTQNDAPKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEE 119
Query: 119 YSKIMTTNFESTYHL-CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177
K N +T L Q K SG G I+ ++S + Y ATK A++ L
Sbjct: 120 LDKHYMVNVRATTLLSSQFARGFDKKSG-GRIINMTSGQFQGPMVGELAYAATKGAIDAL 178
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLV 237
T +LA E A I N++ P T T + +E ++ P R+GEP++ A L+
Sbjct: 179 TSSLAAEVAHLGITVNAINPGPTDTGWM-----TEEIKQGLLPMFPFGRIGEPKDAARLI 233
Query: 238 AYLCLPAASYITGQIISVDGGF 259
+L A +ITGQII +GGF
Sbjct: 234 KFLASEEAEWITGQIIHSEGGF 255
|
Length = 256 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 3e-23
Identities = 73/267 (27%), Positives = 110/267 (41%), Gaps = 24/267 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK---GFVVSG 70
+L A VTGG GIG+ T LA GA V N E + G V+
Sbjct: 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVA- 469
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D + +V + G ++I+VNN G P E + +E+ +
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGG-VDIVVNNAGIATSSPFEETTLQEWQLNLDILATGY 528
Query: 131 YHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ + + + ++ G+ G+IVFI+S + + S Y A KAA L R LA E
Sbjct: 529 FLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYG 588
Query: 190 IRTNSVAP-------------WYTKTSLVERLLENK--EFVDKVIARTPLQRVGEPEEVA 234
IR N+V P W + + + ++ E K RT L+R P ++A
Sbjct: 589 IRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAK---RTLLKRHIFPADIA 645
Query: 235 SLVAYLCLPAASYITGQIISVDGGFTA 261
V +L + TG II+VDGG A
Sbjct: 646 EAVFFLASSKSEKTTGCIITVDGGVPA 672
|
Length = 676 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 3e-23
Identities = 63/224 (28%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
G T L+TGG GIG A + LG V C RNE L + E + VC
Sbjct: 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE----IHTEVC 57
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMT----TNFES 129
D A D R +L++ + ++ LN+L+NN G I++ AE+ TN +
Sbjct: 58 DVADRDSRRELVEWLKKEYP-NLNVLINNAG--IQRNEDLTGAEDLLDDAEQEIATNLLA 114
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD- 188
L L+ P L +I+ +SS + S +Y ATKAA++ T L E KD
Sbjct: 115 PIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALR-EQLKDT 173
Query: 189 NIRTNSVAPWYTKTS-----------LVERLLENKEFVDKVIAR 221
++ +AP T+ L + E ++ V R
Sbjct: 174 SVEVIELAPPLVDTTEGNTQARGKMPLSAFISETEDLVQNTPDR 217
|
Length = 245 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 7e-23
Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 17/258 (6%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-----FVVSG 70
+VTGG+RGIG+ V GA V C+R E E G FV
Sbjct: 8 ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFV--- 64
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFES 129
CD + + LI +F G+++ LVNN G + + T E SA+E+ ++ N S
Sbjct: 65 -PCDVTKEEDIKTLISVTVERF-GRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLIS 122
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ + P L+ S G+I+ +SS+ G + Y ATK A+ +T+ LA + ++
Sbjct: 123 YFLASKYALPHLRKSQ-GNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYG 181
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIAR----TPLQRVGEPEEVASLVAYLCLPAA 245
+R N ++P T L E L I L R+G E +L A
Sbjct: 182 VRVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLA-AEA 240
Query: 246 SYITGQIISVDGGFTANG 263
++ TG + + GG
Sbjct: 241 TFCTGIDLLLSGGAELGY 258
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 8e-23
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 20/239 (8%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RW G ALVTG + GIG A L G V C+R ++ E QS G +
Sbjct: 3 RWR--GRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAG---YPT 57
Query: 72 V----CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
+ CD ++ +Q + + ++ G +++ +NN G +P + E + ++ N
Sbjct: 58 LFPYQCDLSNEEQILSMFSAIRTQHQG-VDVCINNAGLARPEPLLSGKTEGWKEMFDVNV 116
Query: 128 ESTYHLCQLVYPLLKASGV--GSIVFISSVGG--LSHVGSGSIYGATKAAMNQLTRNLAC 183
+ + Y +K V G I+ I+S+ G + V Y ATK A+ LT L
Sbjct: 117 LALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQ 176
Query: 184 E--WAKDNIRTNSVAPWYTKTSLVERLLENK-EFVDKVIARTPLQRVGEPEEVASLVAY 239
E AK +IR S++P +T +L +N E P +PE+VA+ V Y
Sbjct: 177 ELREAKTHIRATSISPGLVETEFAFKLHDNDPEKAAATYESIP---CLKPEDVANAVLY 232
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 93.5 bits (233), Expect = 1e-22
Identities = 75/257 (29%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LKG +V+G G+G+ A GA V +R L++ E G D
Sbjct: 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNN---VGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
DQ L+ +F G+++ LVNN V + KP + + ++ N T
Sbjct: 63 ITDEDQCANLVALALERF-GRVDALVNNAFRVPS--MKPLADADFAHWRAVIELNVLGTL 119
Query: 132 HLCQLVYPLLKASGVGSIVFI-SSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
L Q P L SG GSIV I S V S G+ Y K A+ +++LA E I
Sbjct: 120 RLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGA-YKMAKGALLAASQSLATELGPQGI 177
Query: 191 RTNSVAP---------WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
R NSVAP Y + + + ++ + A + L+R+ +EVAS V +L
Sbjct: 178 RVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLA 237
Query: 242 LPAASYITGQIISVDGG 258
A ITGQ + V+ G
Sbjct: 238 SDLARAITGQTLDVNCG 254
|
Length = 258 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 93.3 bits (232), Expect = 2e-22
Identities = 85/288 (29%), Positives = 120/288 (41%), Gaps = 39/288 (13%)
Query: 3 NAESSFKSSRWS--LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---VELNKC 57
SS SS S L G ALVTGG GIG++ V GA V + +
Sbjct: 2 ATASSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDS 61
Query: 58 LKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG------TNIRKPT 111
L + F CD D + + KF G L+I+VNN G +IR
Sbjct: 62 LGGEPNVCFFH----CDVTVEDDVSRAVDFTVDKF-GTLDIMVNNAGLTGPPCPDIRN-- 114
Query: 112 IEYSAEEYSKIMTTN----FESTYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSI 166
E+ K+ N F H +++ PL K GSIV + SV + +G +
Sbjct: 115 --VELSEFEKVFDVNVKGVFLGMKHAARIMIPLKK----GSIVSLCSVASAIGGLGPHA- 167
Query: 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE--------FVDKV 218
Y +K A+ LTR++A E K IR N V+P+ T+L L E F
Sbjct: 168 YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFA 227
Query: 219 IARTPLQRVG-EPEEVASLVAYLCLPAASYITGQIISVDGGFTANGFN 265
L+ V ++VA+ V +L A YI+G + +DGGFT +
Sbjct: 228 GKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTNHS 275
|
Length = 280 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 92.3 bits (230), Expect = 2e-22
Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 21/241 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
L+TGG GIG+ E A GA V NE + + G V CD +
Sbjct: 1 IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
++ + +++ + G + IL+NN G K +E EE K N + + +
Sbjct: 61 EEVYEAAKKIKKEV-GDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE---WAKDNIRTNSV 195
P + G IV I+SV GL + Y A+KAA +L E + K I+T V
Sbjct: 120 PDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLV 179
Query: 196 APWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVA--------YLCLPAASY 247
P++ T + + + + + ++ EPE VA + L LP +Y
Sbjct: 180 CPYFINTGMFQGVKTPRPLLAPIL---------EPEYVAEKIVRAILTNQQMLYLPFYAY 230
Query: 248 I 248
Sbjct: 231 F 231
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.5 bits (227), Expect = 6e-22
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVC 73
L G A T ++GIG LA GA V SRNE L K ++ +S+ V VS V
Sbjct: 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + E+ ++E+ K G+ +I + G +E S E++ + +L
Sbjct: 66 DLTKREDLERTVKEL--KNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYL 123
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ + P ++ G G I++ +SV + + ++ + +M L R LA E I N
Sbjct: 124 TRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVN 183
Query: 194 SVAPWYTKTSLVERLLENK---------EFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
+ P +T V +L +++ E + + PL R+GEPEE+ LVA+L
Sbjct: 184 GIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDL 243
Query: 245 ASYITGQIISVDGG 258
SYI G +I VDGG
Sbjct: 244 GSYINGAMIPVDGG 257
|
Length = 263 |
| >gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR | Back alignment and domain information |
|---|
Score = 90.3 bits (225), Expect = 1e-21
Identities = 71/258 (27%), Positives = 113/258 (43%), Gaps = 19/258 (7%)
Query: 17 GMTALVTG--GTRGIGQATVEELAGLGA-VVHTC--SRNEVELNKCLKEWQSKGFVVSGS 71
G L+TG R I + L GA + T + K + V+
Sbjct: 1 GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVL--- 57
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNF 127
CD ++ ++ ++L EV + GKL+ LV+++ ++ P ++ S + + K +
Sbjct: 58 PCDVSNDEEIKELFAEVKKDW-GKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDI-- 114
Query: 128 ESTYHLCQLVYPLLK--ASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
S Y L L L G GSIV +S +G V ++ G KAA+ R LA E
Sbjct: 115 -SAYSLVSLAKAALPIMNPG-GSIVTLSYLGSERVVPGYNVMGVAKAALESSVRYLAYEL 172
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
+ IR N+++ KT + + ++ R PL R EEV + A+L +
Sbjct: 173 GRKGIRVNAISAGPIKTLAASGITGFDKMLEYSEQRAPLGRNVTAEEVGNTAAFLLSDLS 232
Query: 246 SYITGQIISVDGGFTANG 263
S ITG+II VDGG+ G
Sbjct: 233 SGITGEIIYVDGGYHIMG 250
|
This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 89.7 bits (223), Expect = 2e-21
Identities = 65/243 (26%), Positives = 98/243 (40%), Gaps = 22/243 (9%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
LV GG+ GIG A A GA V SR+ L + V + ++ D
Sbjct: 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAAL-DITDEAA 59
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
+ E G + +V P M + F Y +
Sbjct: 60 VDAFFAEAGP-----FDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVA------ 108
Query: 141 LKASGV---GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+A+ + GS+ F+S + SG + GA AA+ L R LA E A +R N+V+P
Sbjct: 109 -RAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSP 165
Query: 198 WYTKTSLVERLLEN--KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255
T L +L + + R P +RVG+PE+VA+ + +L A + TG + V
Sbjct: 166 GLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLA--ANGFTTGSTVLV 223
Query: 256 DGG 258
DGG
Sbjct: 224 DGG 226
|
Length = 230 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 89.6 bits (223), Expect = 3e-21
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK L+TG + GIGQA E LA GA + RN +L G V D
Sbjct: 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRW-VVAD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
S RE ++ + G +N+L+NN G N + E +++ N + L
Sbjct: 62 LTSEAGREAVLARA--REMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLT 119
Query: 135 QLVYPLLKASGVGSIVFI-SSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ + PLL+A +V + S+ G + + G + Y A+K A+ + L E A +R
Sbjct: 120 RALLPLLRAQPSAMVVNVGSTFGSIGYPGY-ASYCASKFALRGFSEALRRELADTGVRVL 178
Query: 194 SVAPWYTKTSL----VERLLENKEFVDKVIARTPLQRVGEPEEVASLVA 238
+AP T+T++ V+ L N+ + +PE+VA+ V
Sbjct: 179 YLAPRATRTAMNSEAVQAL--NRAL--GN-------AMDDPEDVAAAVL 216
|
Length = 263 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 90.1 bits (223), Expect = 4e-21
Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 13/260 (5%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-----SRNEVELNKCLK 59
E ++ S LK ALVTGG GIG+A A GA V + ++ K ++
Sbjct: 38 EKTYVGSG-RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIE 96
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI-EYSAEE 118
E K ++ G + D L+ E G L+I+ G + P I + ++E+
Sbjct: 97 ECGRKAVLLPGDLSDEKFA---RSLVHEAHKALGG-LDIMALVAGKQVAIPDIADLTSEQ 152
Query: 119 YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178
+ K N + + L Q PLL SI+ SS+ Y ATKAA+ +
Sbjct: 153 FQKTFAINVFALFWLTQEAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAATKAAILNYS 210
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVA 238
R LA + A+ IR N VAP T+L + ++ + + +TP++R G+P E+A +
Sbjct: 211 RGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYV 270
Query: 239 YLCLPAASYITGQIISVDGG 258
YL +SY+T ++ V GG
Sbjct: 271 YLASQESSYVTAEVHGVCGG 290
|
Length = 294 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.2 bits (224), Expect = 4e-21
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G L+TG + GIG+A E+ A GA V +R E L+ G CD
Sbjct: 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCD 97
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAE---EYSKIMTTNFESTY 131
+ D + L+ +V + G ++IL+NN G +IR+P E S + + + M N+ +
Sbjct: 98 LSDLDAVDALVADVEKRI-GGVDILINNAGRSIRRPLAE-SLDRWHDVERTMVLNYYAPL 155
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAKDNI 190
L + + P + G G I+ +++ G LS S+Y A+KAA++ ++R + EW +
Sbjct: 156 RLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGV 215
Query: 191 RTNSV 195
+ ++
Sbjct: 216 HSTTL 220
|
Length = 293 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 4e-21
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 20 ALVTGGTRGIGQATVEELAGLG-AVVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDA 75
L+TG +RGIG V +L G V R+ EL L S+ ++ V D
Sbjct: 1 VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAA-LGASHSRLHILELDVTDE 59
Query: 76 ASPDQREKLIQEVGSKF-NGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ + + V + + L++L+NN G + P E +E+ ++ N L
Sbjct: 60 IA-----ESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLL 114
Query: 134 CQLVYPLLKASGVGSIVFISSVGG---LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
Q PLL I+ ISS G + G Y A+KAA+N LT++LA E +D I
Sbjct: 115 TQAFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGI 174
Query: 191 RTNSVAPWYTKTSL 204
S+ P + +T +
Sbjct: 175 TVVSLHPGWVRTDM 188
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 4e-21
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
++TG +RGIG+A EEL G +VV +R+E L + LKE G V+ D +
Sbjct: 1 VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQE-LKEELRPGLRVTTVKADLS 59
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGT--NIRKPTIEY-SAEEYSKIMTTNFESTYHL 133
E+L++ + +G+ ++L+NN G+ + K IE+ +E K N S L
Sbjct: 60 DAAGVEQLLEAIRKL-DGERDLLINNAGSLGPVSK--IEFIDLDELQKYFDLNLTSPVCL 116
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ K G+ ++V +SS ++ +Y ++KAA + R LA E + ++R
Sbjct: 117 TSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAE--EPDVRV 174
Query: 193 NSVAP 197
S AP
Sbjct: 175 LSYAP 179
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.4 bits (217), Expect = 2e-20
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 20/259 (7%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS--GSVC 73
A+V GG + +G LA G V N + +E ++ G
Sbjct: 1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
DA S L + V F G++++LV N G ++ ++ + + N Y L
Sbjct: 61 DATSEQSVLALSRGVDEIF-GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNL-VGYFL 118
Query: 134 C--QLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYGATKAAMNQLTRNLACEWAKDN 189
C + +++ G I+ I+S G VGS S Y A K LT++LA + A+
Sbjct: 119 CAREFSRLMIRDGIQGRIIQINSKSG--KVGSKHNSGYSAAKFGGVGLTQSLALDLAEYG 176
Query: 190 IRTNSVAPW-YTKTSLVERLLEN--------KEFVDKV-IARTPLQRVGEPEEVASLVAY 239
I +S+ K+ + + LL + V++ I + PL+R + ++V +++ +
Sbjct: 177 ITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLF 236
Query: 240 LCLPAASYITGQIISVDGG 258
P ASY TGQ I+V GG
Sbjct: 237 YASPKASYCTGQSINVTGG 255
|
Length = 259 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 86.6 bits (215), Expect = 2e-20
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 1/188 (0%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
L+TG + GIG+A E A G V +R L++ E + V + D +
Sbjct: 1 VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
+ + +I E+ G L++++ N G + S + + + + TN + + P
Sbjct: 61 RNQLVIAEL-EAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWY 199
+A G G +V ISSV L + + Y A+KAA++ L +L + K IR + P +
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179
Query: 200 TKTSLVER 207
T L
Sbjct: 180 IDTPLTAN 187
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 5e-20
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG + GIG+AT E+LA G V SRN G + D
Sbjct: 6 VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA------PIPGVELL--ELDVTDD 57
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ + EV ++ G++++LVNN G + E S + + TN + + V
Sbjct: 58 ASVQAAVDEVIARA-GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVL 116
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P ++A G G I+ ISSV G ++Y A+K A+ + +L E + IR + V P
Sbjct: 117 PHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPA 176
Query: 199 YTKTSL 204
YTKT+
Sbjct: 177 YTKTNF 182
|
Length = 270 |
| >gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 5e-20
Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 24/250 (9%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LKG + G + G+G A GA V SRNE +L K +K+ SK + V D
Sbjct: 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL-KRMKKTLSKYGNIHYVVGD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+S + +I++ N ++ LV VG + E+S E +++T + + +
Sbjct: 62 VSSTESARNVIEKAAKVLNA-IDGLVVTVGGYVEDTVEEFSGLE--EMLTNHIKIPLYAV 118
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIRTN 193
LK SIV +SS+ G+ + Y KA + + LA E IR N
Sbjct: 119 NASLRFLKEGS--SIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVN 176
Query: 194 SVAP-WYTKTSLVERLLENKEFVDKVIARTPLQRVGE----PEEVASLVAYLCLPAASYI 248
+AP + ER + L+++G+ PE+ A ++ +L A ++
Sbjct: 177 GIAPTTISGDFEPERNWKK------------LRKLGDDMAPPEDFAKVIIWLLTDEADWV 224
Query: 249 TGQIISVDGG 258
G +I VDGG
Sbjct: 225 DGVVIPVDGG 234
|
Length = 238 |
| >gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 85.7 bits (213), Expect = 8e-20
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 34/271 (12%)
Query: 14 SLKGMTALVTG--GTRGIGQATVEELAGLGA-VVHTC--SRNEVELNKCLKEWQSKGFVV 68
L+G L+ G R I + LA GA + T R E + + +E S V+
Sbjct: 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSD-LVL 61
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
CD + + + L + K+ GKL+ LV+++ ++ ++ S E + M
Sbjct: 62 P---CDVTNDESIDALFATIKKKW-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMD 117
Query: 125 TNFESTYHLCQLVY---PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
S Y L PL+ G SI+ ++ +G V + ++ G KAA+ R L
Sbjct: 118 I---SAYSFTALAKAARPLMNNGG--SILTLTYLGSERVVPNYNVMGVAKAALEASVRYL 172
Query: 182 ACEWAKDNIRTNSVAPWYTKT------SLVERLLENKEFVDKVIARTPLQRVGEPEEVAS 235
A + K+ IR N+++ +T ++L+ E A PL+R EEV +
Sbjct: 173 AADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENE------ANAPLRRNVTIEEVGN 226
Query: 236 LVAYLCLPAASYITGQIISVDGGFTANGFNP 266
A+L +S ITG+II VD G+ G P
Sbjct: 227 TAAFLLSDLSSGITGEIIYVDSGYHIMGMGP 257
|
Length = 259 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 9e-20
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
AL+TG + GIG+AT A G + +R++ L E +S G + D ++P
Sbjct: 8 RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP 67
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ I E+ +F G ++L+NN G P +E ++ ++ N S + C V
Sbjct: 68 EAIAPGIAELLEQF-GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVL 126
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P ++A G G I+ +SS+ + Y +KAA+ T+ LA E IR ++
Sbjct: 127 PGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLG 186
Query: 199 YTKTSL 204
T L
Sbjct: 187 AVNTPL 192
|
Length = 241 |
| >gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs | Back alignment and domain information |
|---|
Score = 85.5 bits (212), Expect = 9e-20
Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 28/259 (10%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKCLKEWQSK 64
G LVTG G+G+A A GA V ++ +K + E ++
Sbjct: 2 RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61
Query: 65 GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMT 124
G +V + S + EK+++ F G+++ILVNN G + + S E++ +M
Sbjct: 62 G---GKAVANYDSVEDGEKIVKTAIDAF-GRVDILVNNAGILRDRSFAKMSEEDWDLVMR 117
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLAC 183
+ + ++ + + +P ++ G I+ SS GL + G + Y A K + L+ LA
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQAN-YSAAKLGLLGLSNTLAI 176
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
E AK NI N++AP + + E ++ L +PE VA LV YLC
Sbjct: 177 EGAKYNITCNTIAP-AAGSRMTETVM-----------PEDLFDALKPEYVAPLVLYLC-H 223
Query: 244 AASYITGQIISVDGGFTAN 262
+ +TG + V G+
Sbjct: 224 ESCEVTGGLFEVGAGWIGK 242
|
Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 84.9 bits (210), Expect = 9e-20
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 21/244 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG------FVV 68
L LVTG + GIG+ A GA V RNE +L + +G F++
Sbjct: 2 LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNF 127
C + + ++L Q + + +L+ +++N G P E + + + + N
Sbjct: 62 DLLTCTS---ENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNV 117
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+T+ L Q + PLL S GS+VF SS G + Y +K A L + LA E+ +
Sbjct: 118 NATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQ 177
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
N+R N + P T+T+ + F + P Q++ P ++ L +L +
Sbjct: 178 RNLRVNCINPGGTRTA-----MRASAFPTE----DP-QKLKTPADIMPLYLWLMGDDSRR 227
Query: 248 ITGQ 251
TG
Sbjct: 228 KTGM 231
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 1e-19
Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 14/202 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+KG LVTG RGIG+A VE+L GA V+ +R+ + + + + V
Sbjct: 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV----TDLGPRVVPLQLDV 58
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTY 131
D AS + +V ILVNN G +E + M TN+
Sbjct: 59 TDPASVAAAAEAASDV--------TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPL 110
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ + P+L A+G G+IV + SV + + Y A+KAA LT+ L E A R
Sbjct: 111 AMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTR 170
Query: 192 TNSVAPWYTKTSLVERLLENKE 213
V P T + L K
Sbjct: 171 VLGVHPGPIDTDMAAGLDAPKA 192
|
Length = 238 |
| >gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 5e-19
Identities = 70/264 (26%), Positives = 111/264 (42%), Gaps = 32/264 (12%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVV----HTCSRNEVELNKCLKEWQSKGFVVS 69
L G A+VTG G+G+A LA LGA V + + ++ ++ +K V+
Sbjct: 9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVA 68
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM------ 123
G + A+ D+ +G L+I+VNN G + S EE+ ++
Sbjct: 69 GDISQRATADELVATAVGLGG-----LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRG 123
Query: 124 ---TTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177
T + Y + KA+G G IV SS GL + YGA KA + L
Sbjct: 124 HFLLTRNAAAYWRAK-----AKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITAL 178
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLV 237
T + A + +R N++ P +T++ + + V+ PL PE V LV
Sbjct: 179 TLSAARALGRYGVRANAICP-RARTAMTADVFGDAPDVEAG-GIDPLS----PEHVVPLV 232
Query: 238 AYLCLPAASYITGQIISVDGGFTA 261
+L PAA+ + GQ+ V G
Sbjct: 233 QFLASPAAAEVNGQVFIVYGPMVT 256
|
Length = 306 |
| >gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 7e-19
Identities = 46/191 (24%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNFE 128
D P Q E + + ++ G+L+ L++++ ++ ++ S E ++ M +
Sbjct: 67 LDVREPGQLEAVFARIAEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCH 125
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
S + +L PL+ G S++ +S G V + ++ G KAA+ R LA E
Sbjct: 126 SFIRMARLAEPLMTNGG--SLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGPK 183
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
IR ++++P KT + + ++ R PL+R+ + ++V ++ A+L AA +
Sbjct: 184 GIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAARRL 243
Query: 249 TGQIISVDGGF 259
TG + +DGG+
Sbjct: 244 TGNTLYIDGGY 254
|
Length = 258 |
| >gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 82.2 bits (203), Expect = 1e-18
Identities = 74/247 (29%), Positives = 108/247 (43%), Gaps = 11/247 (4%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G ALVTG RGIG L G V + +K K + ++ D A
Sbjct: 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIA---MDVA 66
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIE-YSAEEYSKIMTTNFESTYHLC 134
Q + EV +F G+L+ LV N + T+E S +++++ N L
Sbjct: 67 DEAQVAAGVAEVLGQF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLA 125
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P L+A G+IV ++S Y A+K + LT LA + IR N+
Sbjct: 126 KHCAPYLRAHN-GAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE-IRVNA 183
Query: 195 VAP-WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253
V+P W +R E D A+ P RVG E+VA++VA+L A ++TGQ
Sbjct: 184 VSPGWIDARDPSQRRAEPLSEADH--AQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEF 241
Query: 254 SVDGGFT 260
VDGG T
Sbjct: 242 VVDGGMT 248
|
Length = 255 |
| >gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 2e-18
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSA---EEYSKIMTTNFE 128
CD Q E+ + + K+ GKL+ILV+ + + ++SA E +++ + +
Sbjct: 66 CDVQDDAQIEETFETIKQKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAY 124
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
S LC+ PL+ G SIV ++ +GG+ + + ++ G KAA+ R LA E
Sbjct: 125 SLAPLCKAAKPLMSEGG--SIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPK 182
Query: 189 NIRTN--SVAPWYT-KTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
NIR N S P T +S V +L+ V++ PL+R EV + A+L A
Sbjct: 183 NIRVNAISAGPIRTLASSAVGGILDMIHHVEEK---APLRRTVTQTEVGNTAAFLLSDLA 239
Query: 246 SYITGQIISVDGGFTANGF 264
S ITGQ I VD G+ G
Sbjct: 240 SGITGQTIYVDAGYCIMGM 258
|
Length = 258 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.5 bits (202), Expect = 2e-18
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 14/218 (6%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
+TG GIG+AT A G V NE L E + G +G++ D
Sbjct: 5 FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGA-GNAWTGAL-DVTDRAA 62
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
+ + + + G+L++L NN G P + E + +++ N + + P
Sbjct: 63 WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPY 122
Query: 141 LKASGVGSIVF-ISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWY 199
LKA+ G+ V SS + ++Y ATK A+ LT L EW + IR V P +
Sbjct: 123 LKAT-PGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLF 181
Query: 200 TKTSLVERLLENKEFVDKVIARTPLQRVG---EPEEVA 234
T++++ + +R+G PE+VA
Sbjct: 182 VDTAMLDGTSNE-------VDAGSTKRLGVRLTPEDVA 212
|
Length = 260 |
| >gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 4e-18
Identities = 77/259 (29%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVT +RGIG EL GA V SRNE L K LKE + G V + D +
Sbjct: 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKA-DLSD 59
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAE-----EYSKIMTTNFESTY 131
D + L++E G ++ LV N G N+R +P + + A E + + Y
Sbjct: 60 KDDLKNLVKEAWELL-GGIDALVWNAG-NVRCEPCMLHEAGYSDWLEAALLHLV--APGY 115
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
L+ L+ G +V++SSV + + T+A + QL + ++ + IR
Sbjct: 116 LTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIR 175
Query: 192 TNSV---------APWYTKTSLVERLLENKEFVDK-VIARTPLQRVGEPEEVASLVAYLC 241
+V A ER + +E ++ V+ RTPL+R G EE+ SL+A+L
Sbjct: 176 AYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLL 235
Query: 242 LPAASYITGQIISVDGGFT 260
A Y+ G I DG T
Sbjct: 236 SENAEYMLGSTIVFDGAMT 254
|
Length = 259 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 5e-18
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 11/211 (5%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS---KGFVVSGSVCDAAS 77
++TG G+G+A A G + NE + LK + GF CD
Sbjct: 4 MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQR---CDVRD 60
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
Q L Q K+ G ++++VNN G E S E++ + N C+
Sbjct: 61 YSQLTALAQACEEKWGG-IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAF 119
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
PL K G IV I+S+ GL + S Y KA + L+ L E A D I + V P
Sbjct: 120 LPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179
Query: 198 WYTKTSLVERLLEN----KEFVDKVIARTPL 224
+ +T+L++ K V K++ ++P+
Sbjct: 180 SFFQTNLLDSFRGPNPAMKAQVGKLLEKSPI 210
|
Length = 270 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 6e-18
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 10/185 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+K T LVTG RGIG+A VE L GA V+ R+ + ++ K + V
Sbjct: 1 IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI-MTTNFESTYH 132
D S I+ ++ +++++NN G +E A E K M N
Sbjct: 61 DPES-------IKAAAAQAK-DVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLR 112
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L Q P+LKA+G G+IV ++SV L + + Y A+K+A LT+ L E A
Sbjct: 113 LAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLV 172
Query: 193 NSVAP 197
SV P
Sbjct: 173 LSVHP 177
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3 | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 7e-17
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 22 VTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81
+TG + GIG+AT A GA V +R+ L++ +E + G V D A Q
Sbjct: 5 ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQV 64
Query: 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL 141
E+ +F G+++ VNN G + + + EE+ ++ N+ + P L
Sbjct: 65 ERAADTAVERF-GRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHL 123
Query: 142 KASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ G G+++ + S+ G + Y A+K A+ T +L E A D
Sbjct: 124 RRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDG 171
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233 |
| >gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 79.5 bits (197), Expect = 7e-17
Identities = 75/260 (28%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTC---SRNEVELNKCLKEWQSKGFVVSGS 71
L G ALVTG RGIG A E LA GA V C L V G+
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHV-VCLDVPAAGEALAAVANR-------VGGT 259
Query: 72 --VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D +PD ++ + + + G L+I+V+N G K + ++ N +
Sbjct: 260 ALALDITAPDAPARIAEHLAERH-GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLA 318
Query: 130 TYHLCQLVYPL-----LKASGV----GSIVFISSVGGLS-HVGSGSIYGATKAAMNQLTR 179
PL L A+G G IV +SS+ G++ + G + Y A+KA + L +
Sbjct: 319 ---------PLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ-TNYAASKAGVIGLVQ 368
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR--TPLQRVGEPEEVASLV 237
LA A+ I N+VAP + +T + + F + R LQ+ G P +VA +
Sbjct: 369 ALAPLLAERGITINAVAPGFIETQMTAAI----PFATREAGRRMNSLQQGGLPVDVAETI 424
Query: 238 AYLCLPAASYITGQIISVDG 257
A+L PA+ +TG ++ V G
Sbjct: 425 AWLASPASGGVTGNVVRVCG 444
|
Length = 450 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 8e-17
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 22/262 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV- 72
LKG T L+TG IG A V+ + G +V ++ LN+ L+ + S+
Sbjct: 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLV 60
Query: 73 -CDAASPDQREKLIQEVGSKFNGKLNILVNNV---GTNIRKPTIEYSAEEYSKIMTTNFE 128
D + E+ + + K+ GK++ VN + K + S +++++ ++ +
Sbjct: 61 ELDITDQESLEEFLSKSAEKY-GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLG 119
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLS----HVGSGSI------YGATKAAMNQLT 178
S++ Q K G G++V ISS+ G+ + G+ Y A KA + LT
Sbjct: 120 SSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLT 179
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVA 238
+ LA + NIR N V+P + + + F++ + + +P+++ +
Sbjct: 180 KYLAKYFKDSNIRVNCVSPGGILDN------QPEAFLNAYKKCCNGKGMLDPDDICGTLV 233
Query: 239 YLCLPAASYITGQIISVDGGFT 260
+L + YITGQ I VD GF+
Sbjct: 234 FLLSDQSKYITGQNIIVDDGFS 255
|
Length = 256 |
| >gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 1e-16
Identities = 75/267 (28%), Positives = 114/267 (42%), Gaps = 26/267 (9%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVC 73
LKG LVTGG G+G+A V+ GA V ++ L+E ++ G V G
Sbjct: 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA----AGLQELEAAHGDAVVGVEG 58
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYSKIMTTNFE 128
D S D ++ + + F GK++ L+ N G T + + E + ++ N +
Sbjct: 59 DVRSLDDHKEAVARCVAAF-GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVK 117
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ P L AS GS++F S G G G +Y A K A+ L + LA E A
Sbjct: 118 GYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAP- 175
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ----------RVGEPEEVA-SLV 237
+R N VAP + L R ++ DK I+ PL R+ + EE + V
Sbjct: 176 YVRVNGVAPGGMSSDL--RGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYV 233
Query: 238 AYLCLPAASYITGQIISVDGGFTANGF 264
+ TG +++ DGG GF
Sbjct: 234 FFATRGDTVPATGAVLNYDGGMGVRGF 260
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262 |
| >gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 1e-16
Identities = 63/269 (23%), Positives = 108/269 (40%), Gaps = 40/269 (14%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCS-RNEVELNKCLKEWQSKGFVVS 69
SLKG L+ GG + +G +LA GA +H S ++ + + + ++ G
Sbjct: 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV 64
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D + EKL + + F G+ +I +N VG ++KP +E S EY ++ N +S
Sbjct: 65 AFQADLTTAAAVEKLFDDAKAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKS 123
Query: 130 TY--------------HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175
+ + LV LL A S Y +KA +
Sbjct: 124 AFFFIKEAGRHLNDNGKIVTLVTSLLGA----------------FTPFYSAYAGSKAPVE 167
Query: 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLV--ERLLENKEFVDKVIARTPLQRVG--EPE 231
TR + E+ I +V P T + E + A +P + G + E
Sbjct: 168 HFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIE 227
Query: 232 EVASLVAYLCLPAASYITGQIISVDGGFT 260
++ + +L + +ITGQ I ++GG+T
Sbjct: 228 DIVPFIRFL-VTDGWWITGQTILINGGYT 255
|
Length = 257 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 2e-16
Identities = 79/252 (31%), Positives = 118/252 (46%), Gaps = 20/252 (7%)
Query: 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCD 74
L+TG +RGIG+AT A G +V +R+ + ++ G VV+G D
Sbjct: 4 VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAG---D 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
A+ + V S F G+L+ LVNN G P + A ++ TN Y L
Sbjct: 61 VANEADVIAMFDAVQSAF-GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAY-L 118
Query: 134 C--QLVYPLLKASGV--GSIVFISSVGGLSHVGSGS---IYGATKAAMNQLTRNLACEWA 186
C + L G G+IV +SS+ S +GS + Y +K A++ LT LA E
Sbjct: 119 CAREAARRLSTDRGGRGGAIVNVSSIA--SRLGSPNEYVDYAGSKGAVDTLTLGLAKELG 176
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
+R N+V P +T + ++ A+TPL R GE +EVA + +L AAS
Sbjct: 177 PHGVRVNAVRPGLIETE-IHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAAS 235
Query: 247 YITGQIISVDGG 258
Y+TG ++ V GG
Sbjct: 236 YVTGALLDVGGG 247
|
Length = 248 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 2e-16
Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 10/231 (4%)
Query: 22 VTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81
+TG GIG+ T A G V +E L L VV+G++ D
Sbjct: 5 ITGAASGIGRETALLFARNGWFVGLYDIDEDGL-AALAAELGAENVVAGAL-DVTDRAAW 62
Query: 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL 141
+ + + G+L+ L NN G P + + +++ N + + P L
Sbjct: 63 AAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALPYL 122
Query: 142 KASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201
KA+ ++ +S + ++Y ATK A+ LT L EWA+ IR V PW+
Sbjct: 123 KATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVD 182
Query: 202 TSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLV--AYLCLPAASYITG 250
T ++ + + L RV +VA +V A +P Y G
Sbjct: 183 TPILTK------GETGAAPKKGLGRVLPVSDVAKVVWAAAHGVPKLHYTVG 227
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 4e-16
Identities = 76/260 (29%), Positives = 109/260 (41%), Gaps = 45/260 (17%)
Query: 18 MTALVTGGTRGIGQATVEELAGLG-AV-VHTCSRNEVELNKCLKEWQSKG---FVVSGSV 72
ALVTG R IG+A +LA G V VH +R+ E E ++ G +
Sbjct: 10 RAALVTGAARRIGRAIALDLAAHGFDVAVH-YNRSRDEAEALAAEIRALGRRAVALQ--- 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D A + L+ + G + +LVNN ++ + + M TN + +
Sbjct: 66 ADLADEAEVRALVARASAAL-GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFV 124
Query: 133 LCQLVYPLLKASGVGSIV-------------FISSVGGLSHVGSGSIYGATKAAMNQLTR 179
L Q L A G +V F+S Y +KAA+ TR
Sbjct: 125 LAQAFARALPADARGLVVNMIDQRVWNLNPDFLS-------------YTLSKAALWTATR 171
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
LA A IR N++ P T S R ++F + A TPL R PEE+A+ V Y
Sbjct: 172 TLAQALAPR-IRVNAIGPGPTLPS--GRQSP-EDF-ARQHAATPLGRGSTPEEIAAAVRY 226
Query: 240 L-CLPAASYITGQIISVDGG 258
L P+ +TGQ+I+VDGG
Sbjct: 227 LLDAPS---VTGQMIAVDGG 243
|
Length = 258 |
| >gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 4e-16
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 7/195 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV-C 73
LK LVTG GIG+ A GA V R E +L E ++ G +
Sbjct: 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPL 69
Query: 74 D--AASPDQREKLIQEVGSKFNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFEST 130
D A+P ++L + +F G+L+ +++N G P + E + +M N +T
Sbjct: 70 DLLTATPQNYQQLADTIEEQF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNAT 128
Query: 131 YHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ L Q + PLL S S+VF SS VG G+ Y +K A + + LA E+ N
Sbjct: 129 FMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGA-YAVSKFATEGMMQVLADEYQGTN 187
Query: 190 IRTNSVAPWYTKTSL 204
+R N + P T+T++
Sbjct: 188 LRVNCINPGGTRTAM 202
|
Length = 247 |
| >gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 5e-16
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 27/262 (10%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCD 74
A+V GG + +G+ LA G V N K E ++ G G D
Sbjct: 1 MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A + L + V F ++++LV + G ++ ++ + + N Y LC
Sbjct: 61 ATNEQSVIALSKGVDEIFK-RVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVG-YFLC 118
Query: 135 --QLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYGATKAAMNQLTRNLACEWAKDNI 190
+ +++ G I+ I+S G VGS S Y A K LT++LA + A+ I
Sbjct: 119 AREFSKLMIRDGIQGRIIQINSKSG--KVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGI 176
Query: 191 RTNSVAPW-YTKTSLVERLLEN-------------KEFVDKVIARTPLQRVGEPEEVASL 236
NS+ K+ + + LL + ++DKV PL+R + ++V ++
Sbjct: 177 TVNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKV----PLKRGCDYQDVLNM 232
Query: 237 VAYLCLPAASYITGQIISVDGG 258
+ + P ASY TGQ I++ GG
Sbjct: 233 LLFYASPKASYCTGQSINITGG 254
|
Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 7e-16
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
+TG +RG G+A E G V +R+ L +++ + ++ V D A+
Sbjct: 7 FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFA 66
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
++ F G+L+I+VNN G + E + E + TNF + Q V P
Sbjct: 67 ---AVETAVEHF-GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122
Query: 141 LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
L+ G I+ ISS+GG+S IY A+K A+ ++ LA E A+ I+ V P
Sbjct: 123 LREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEP 179
|
Length = 275 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 4e-15
Identities = 61/228 (26%), Positives = 91/228 (39%), Gaps = 22/228 (9%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L+G +TGG RGIG AT LA LGA V +E + E G VV G +
Sbjct: 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---GLVVGGPL- 57
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D P + V + G +++LVNN G P ++ +I+ N
Sbjct: 58 DVTDPASFAAFLDAVEADL-GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILG 116
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+L P + G G +V ++S+ G V + Y A+K A+ T E + +
Sbjct: 117 SKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVS 176
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIARTPL---QRVGEPEEVASLVA 238
V P + T L IA T + EPE+VA+ +
Sbjct: 177 VVLPSFVNTEL--------------IAGTGGAKGFKNVEPEDVAAAIV 210
|
Length = 273 |
| >gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 2e-14
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 35/254 (13%)
Query: 18 MTA--LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
M A L+TG + IG A L G V R + + G D
Sbjct: 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP---AIDGLRQAG--AQCIQADF 55
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLC 134
++ I E+ +G L +++N + KP A+ +++M + + Y L
Sbjct: 56 STNAGIMAFIDELKQHTDG-LRAIIHNASDWLAEKPGAPL-ADVLARMMQIHVNAPYLLN 113
Query: 135 QLVYPLLKASGVGS--IVFIS----SVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ LL+ G + I+ I+ G H+ Y A+KAA++ +T + A + A
Sbjct: 114 LALEDLLRGHGHAASDIIHITDYVVEKGSDKHIA----YAASKAALDNMTLSFAAKLAP- 168
Query: 189 NIRTNSVAPWYTKTSLVERLLENK----EFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
++ NS+AP +L +L N+ + K +A++ L+ EE+ LV YL
Sbjct: 169 EVKVNSIAP-----AL---ILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYLL--T 218
Query: 245 ASYITGQIISVDGG 258
+ Y+TG+ + VDGG
Sbjct: 219 SCYVTGRSLPVDGG 232
|
Length = 236 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 3e-14
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G +VTG GIG+ T A GA V +E + + ++ G V D +
Sbjct: 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVS 374
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
D E + V ++ G +I+VNN G + ++ SAE++ +++ N H C+L
Sbjct: 375 DADAMEAFAEWVRAEH-GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRL 433
Query: 137 VYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
+ G G IV ++S + S Y +KAA+ L+ L E A I ++
Sbjct: 434 FGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAI 493
Query: 196 APWYTKTSLV 205
P + T++V
Sbjct: 494 CPGFVDTNIV 503
|
Length = 582 |
| >gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 3e-14
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G A++TGG GIG AT E A GA V ++ L + + +++GF V G +CD
Sbjct: 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
++ L E + G ++++ +N G + P +E + +++ ++ + + H +
Sbjct: 66 HREEVTHLADE-AFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEA 124
Query: 137 VYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
P LL+ G +VF +S GL YG K + L LA E D I + +
Sbjct: 125 FLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVL 184
Query: 196 APWYTKTSLV 205
P +T+LV
Sbjct: 185 CPMVVETNLV 194
|
Length = 275 |
| >gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 1e-13
Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 34/170 (20%)
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL----------------------- 158
+ NF HL + + P + G +IV ++S+ G
Sbjct: 67 VARVNFLGLRHLTEALLPRMAPGG--AIVNVASLAGAEWPQRLELHKALAATASFDEGAA 124
Query: 159 ---SH-VGSGSIYGATKAAMNQLTRNLACEWAKD-NIRTNSVAPWYTKTSLVERLLE--N 211
+H V + Y +K A+ T A W IR N VAP T ++
Sbjct: 125 WLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLG 184
Query: 212 KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261
+E VD + R +E A+++ +LC AA +I G + VDGG A
Sbjct: 185 QERVDSDA--KRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGLAA 232
|
Length = 241 |
| >gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 1e-13
Identities = 68/268 (25%), Positives = 105/268 (39%), Gaps = 35/268 (13%)
Query: 20 ALVTGGTRGIGQATVEEL--AGLGAVVH------TCSRNEVELNKCLKEWQSKGFVVSGS 71
A+VTG + IG + L G V+H S ELN +
Sbjct: 4 AVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNA---RRPNSAVTCQAD 60
Query: 72 VCDAAS-PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE-----------Y 119
+ ++A+ + E +I F G+ ++LVNN P + A E
Sbjct: 61 LSNSATLFSRCEAIIDACFRAF-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQV 119
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVG------SIVFISSVGGLSHVGSGSIYGATKAA 173
+++ +N + Y L + + SIV + + ++Y K A
Sbjct: 120 AELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHA 179
Query: 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEE 232
+ LTR+ A E A IR N VAP + +++ KV PL QR E+
Sbjct: 180 LEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKV----PLGQREASAEQ 235
Query: 233 VASLVAYLCLPAASYITGQIISVDGGFT 260
+A +V +L P A YITG I VDGG +
Sbjct: 236 IADVVIFLVSPKAKYITGTCIKVDGGLS 263
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 5e-13
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 21/239 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
A+VTG + G G T ELA G +V RN E + L Q+ + ++
Sbjct: 5 IAIVTGASSGFGLLTTLELAKKGYLVIATMRNP-EKQENLLS-QATQLNLQQNI-KVQQL 61
Query: 79 D----QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D Q V + G++++LVNN G E EEY K TN +
Sbjct: 62 DVTDQNSIHNFQLVLKEI-GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVT 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
Q V P ++ G I+ ISS+ G S Y ++K A+ + +L E I
Sbjct: 121 QAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVAL 180
Query: 195 VAP-------WYTKTSLVERLLE----NKEFVDKVIA--RTPLQRVGEPEEVASLVAYL 240
+ P W L E E KE++ K+ + G P +VA+L+ +
Sbjct: 181 IEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEI 239
|
Length = 280 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 8e-13
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L T LVTG ++G+G+ + A GA V +R++ +L K V +G
Sbjct: 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDA-----IVEAGHPE 57
Query: 74 DAASP--------DQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYS 120
A + E+ + GKL+ +V+ G + + T+ +Y
Sbjct: 58 PFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQY- 116
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+I T + L + ++PLLK S S++F+ G + +GA+KAA+N L +
Sbjct: 117 RINTV---APMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKV 173
Query: 181 LACEWAK-DNIRTNSVAP 197
A EW + N+R N + P
Sbjct: 174 AADEWERFGNLRANVLVP 191
|
Length = 239 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 2e-12
Identities = 57/184 (30%), Positives = 80/184 (43%), Gaps = 7/184 (3%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG + GIG+AT LA G V+ +R V+ + L +S V D AS
Sbjct: 5 VALVTGASSGIGKATARRLAAQGYTVYGAARR-VDKMEDLAS--LGVHPLSLDVTDEASI 61
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
I G++++LVNN G + +E + N L QLV
Sbjct: 62 KAAVDTII----AEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVL 117
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P ++A G I+ ISS+GG + G+ Y ATK A+ + L E A I + P
Sbjct: 118 PHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPG 177
Query: 199 YTKT 202
KT
Sbjct: 178 GIKT 181
|
Length = 273 |
| >gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 3e-12
Identities = 54/220 (24%), Positives = 85/220 (38%), Gaps = 17/220 (7%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVCDA 75
L+ G T I +A A GA ++ +R+ L + + +++G V VS D
Sbjct: 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDI 60
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+ + +I++ VGT + E + TNFE L
Sbjct: 61 LDTASHAAFLDSLP----ALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLT 116
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L+ +A G G+IV ISSV G S +YG+ KAA+ L K + +V
Sbjct: 117 LLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTV 176
Query: 196 APWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVAS 235
P + +T + L + P +PEEVA
Sbjct: 177 KPGFVRTPMTAGL------------KLPGPLTAQPEEVAK 204
|
Length = 243 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 4e-12
Identities = 53/227 (23%), Positives = 73/227 (32%), Gaps = 51/227 (22%)
Query: 20 ALVTGGTRGIGQATVEELA--GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
LVTGG+ GIG A LA G V+ R+ V V +AA
Sbjct: 1 VLVTGGSGGIGGAIARWLASRGSPKVLVVSRRDVV-------------------VHNAAI 41
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D G I E + T L +
Sbjct: 42 LD-----------------------DGRLID--LTGSRIERAIRANVVG---TRRLLEAA 73
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
L+KA +G + ISSV GL Y A+KAA++ L + A E + + +VA
Sbjct: 74 RELMKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVAC 133
Query: 198 WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
S + + E + R R PEEVA +
Sbjct: 134 GTWAGSGMAKGPVAPEEILGN--RRHGVRTMPPEEVARALLNALDRP 178
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 4e-12
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+ L+TG + GIG EL G V R ++ + S GF +G + D P
Sbjct: 4 SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSLGF--TGILLDLDDP 57
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ E+ EV + + +L L NN G + P S ++ + +TNF T+ L L+
Sbjct: 58 ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLL 117
Query: 139 PLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
P + G G IV SSV GL S G G+ Y A+K A+ + L E I+ + + P
Sbjct: 118 PAMLPHGEGRIVMTSSVMGLISTPGRGA-YAASKYALEAWSDALRMELRHSGIKVSLIEP 176
Query: 198 WYTKTSLVE 206
+T +
Sbjct: 177 GPIRTRFTD 185
|
Length = 256 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 8e-12
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAA 76
TAL+TG +RGIG A ELA + R L++ E F V D
Sbjct: 4 PTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAELPGATPFPV-----DLT 57
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
P+ ++++ G+L++LV+N G P E + +E+ + N + L +L
Sbjct: 58 DPEAIAAAVEQL-----GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRL 112
Query: 137 VYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
+ P L+A+ G +VFI+S GL ++ G GS Y A+K A+ L L E N+R SV
Sbjct: 113 LLPALRAAH-GHVVFINSGAGLRANPGWGS-YAASKFALRALADALREEEP-GNVRVTSV 169
Query: 196 APWYTKTSLVERL--LENKEF-VDKVIARTPLQRVGEPEEVASLVA 238
P T T + L E E+ ++ + PE VA V
Sbjct: 170 HPGRTDTDMQRGLVAQEGGEYDPERYLR---------PETVAKAVR 206
|
Length = 227 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-11
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 8/179 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
L+TG + GIG+A + G V +R ++ + + GF + D
Sbjct: 3 VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV----EALAAAGF--TAVQLDVNDG 56
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+L +E+ ++ +G L++L+NN G P ++ E + TN + + + ++
Sbjct: 57 AALARLAEELEAE-HGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALF 115
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
PLL+ S G +V I SV G+ Y A+KAA++ L+ L E A ++ V P
Sbjct: 116 PLLRRSR-GLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQP 173
|
Length = 274 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 1e-11
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAV---VHTCSRNEVELNKCLKEWQSKGFVVSGS---- 71
L+TG + GIG LA + V+ R+ L K + W++ G + G+
Sbjct: 2 VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRD---LKKKGRLWEAAGALAGGTLETL 58
Query: 72 ---VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
VCD+ S + + E +++LV N G + P S + + + N
Sbjct: 59 QLDVCDSKSVAAAVERVTE------RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVF 112
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
T + Q P +K G G I+ SSVGGL + +Y A+K A+ L +LA +
Sbjct: 113 GTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPF 172
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVD 216
N+ + + T+ +E++L + E V
Sbjct: 173 NVHLSLIECGPVHTAFMEKVLGSPEEVL 200
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 1e-11
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 7/173 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G A++TG G G A A LG + + L++ + E +++G V G D
Sbjct: 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ Q E L +F G +++L NN G E S ++ ++ N H
Sbjct: 64 VSDAAQVEALADAALERF-GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGV 122
Query: 135 QLVYPLLKASG------VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ PL+ A+ G IV +S+ GL + IY +K A+ LT L
Sbjct: 123 RAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETL 175
|
Length = 287 |
| >gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 2e-11
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 9/225 (4%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC-DAA 76
VTG GIG+AT LA GA + R+ L + + + ++ G V D +
Sbjct: 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ- 135
D ++ + G +++++N G + + E++ +++ N H+ +
Sbjct: 61 DYDAVAAFAADIHAAH-GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIET 119
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
V P++ A G +V +SS GL + + Y A+K + L+ L + A+ I + V
Sbjct: 120 FVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVV 179
Query: 196 APWYTKTSLVER-----LLENKEFVDKVIARTPLQRVGEPEEVAS 235
P KT LV + V K + R V PE+ A
Sbjct: 180 VPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAV-TPEKAAE 223
|
Length = 272 |
| >gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 3e-11
Identities = 70/274 (25%), Positives = 104/274 (37%), Gaps = 46/274 (16%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
+V G GIGQA + G G V NE L K + GF VS D +S +
Sbjct: 5 VVVIGAGGIGQAIARRV-GAGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES 63
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
+ L + G + LV+ G + + + E I+ + T + + +
Sbjct: 64 VKALAATAQTL--GPVTGLVHTAGVSPSQASPE-------AILKVDLYGTALVLEEFGKV 114
Query: 141 LKASGVGSIVFISSVGG-------------LSH-----------------VGSGSIYGAT 170
+ G G V I+S G L+ S Y
Sbjct: 115 IAPGGAG--VVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIA 172
Query: 171 KAAMNQL-TRNLACEWAKDNIRTNSVAPWYTKTSLVERLL--ENKEFVDKVIARTPLQRV 227
K A N L A +W + R NS++P T L + L + + A++P R
Sbjct: 173 KRA-NALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRP 231
Query: 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261
G P+E+A+L +L P S+ITG VDGG TA
Sbjct: 232 GTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA 265
|
Length = 275 |
| >gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 3e-11
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 15/191 (7%)
Query: 84 LIQEVGSKFNGKLNILVNNV--GTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL 141
+ ++V F G ++ILV+++ I KP +E S + Y ++T+ S L P++
Sbjct: 109 VAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIM 167
Query: 142 KASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD-NIRTNSVAPWY 199
G S+ +++S+ + G G + KAA+ T+ LA E + IR N++
Sbjct: 168 NPGGSTISLTYLASMRAVPGYGGG--MSSAKAALESDTKVLAWEAGRRWGIRVNTI---- 221
Query: 200 TKTSLVERLLENKEFVDKVI----ARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255
+ L R + F+++++ PL E E+V + A+L P AS ITG+ + V
Sbjct: 222 SAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYV 281
Query: 256 DGGFTANGFNP 266
D G G P
Sbjct: 282 DHGANVMGIGP 292
|
Length = 299 |
| >gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 4e-11
Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 3/181 (1%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
++TG + G+G+AT A GA V +R E L E ++ G V D A
Sbjct: 10 VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADA 69
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ + + G ++ VNN + P + + EE+ ++ + H
Sbjct: 70 EAVQAAADRAEEEL-GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAAL 128
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD--NIRTNSVA 196
++ G+I+ + S + S Y A K A+ T +L CE D + V
Sbjct: 129 RHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQ 188
Query: 197 P 197
P
Sbjct: 189 P 189
|
Length = 334 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 4e-11
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 15/233 (6%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVTG T G G+ G V R + L + E ++ V + A+
Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAA 60
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
++ ++ + +++ +++LVNN G + +P + S E++ ++ TN + ++ +
Sbjct: 61 IEE---MLASLPAEWR-NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRA 116
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
V P + G I+ I S G G++YGATKA + Q + NL + +R +
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176
Query: 197 PWY---TKTSLVERLLENKEFVDKVIART-PLQRVGEPEEVASLVAYLC-LPA 244
P T+ S V R + +K T L PE+V+ V ++ LPA
Sbjct: 177 PGLVGGTEFSNV-RFKGDDGKAEKTYQNTVALT----PEDVSEAVWWVATLPA 224
|
Length = 248 |
| >gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 5e-11
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 94 GKLNILVNNV--GTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIV 150
G ++ILV+++ G + KP +E S + Y ++ + S L Q P++ G S+
Sbjct: 119 GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLT 178
Query: 151 FISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA-KDNIRTNSVAPWYTKTSLVERLL 209
+I+S + G G + KAA+ TR LA E K IR N++ + L R
Sbjct: 179 YIASERIIPGYGGG--MSSAKAALESDTRVLAFEAGRKYKIRVNTI----SAGPLGSRAA 232
Query: 210 ENKEFVDKVI----ARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANG 263
+ F+D +I A PLQ+ +EV + A+L P AS ITG I VD G A G
Sbjct: 233 KAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMG 290
|
Length = 303 |
| >gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 6e-11
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 15 LKGMTALVTGGTR------GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L+G L+TG GI +A E+ A L A + + E + K E S+ V
Sbjct: 4 LQGKKILITGMISERSIAYGIAKACREQGAEL-AFTYVVDKLEERVRKMAAELDSE-LVF 61
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
CD AS D+ ++ ++G ++G L+ LV+++G P S + I F
Sbjct: 62 R---CDVASDDEINQVFADLGKHWDG-LDGLVHSIGF---APKEALSGDFLDSISREAFN 114
Query: 129 STYHLCQLVYPLLKASGV-------GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ + + P L + +IV +S +G + + + ++ G KA++ R
Sbjct: 115 TAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFT 174
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
A K+ IR N ++ KT + + + + V A PL+R EEV + A+L
Sbjct: 175 AACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLL 234
Query: 242 LPAASYITGQIISVDGGFTANGFN 265
+S ITG+I VDGG++ N +
Sbjct: 235 SDLSSGITGEITYVDGGYSINALS 258
|
Length = 261 |
| >gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 7e-11
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK----PTIEYSAEEYSKIMTTNFE 128
D + P+ + L + + GK++ +V++V ++ +E S E ++ M +
Sbjct: 62 LDVSKPEHFKSLAESLKKDL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVY 120
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
S L + + PLL S++ +S +GG+ +V ++ G KAA+ R LA + K
Sbjct: 121 SLIELTRALLPLLNDGA--SVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKK 178
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
IR N+++ KT + + + + PL++ EEV + YL +S +
Sbjct: 179 GIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGV 238
Query: 249 TGQIISVDGGFTANG 263
TG+I VD G+ G
Sbjct: 239 TGEIHYVDAGYNIMG 253
|
Length = 274 |
| >gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 2e-10
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 147 GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206
GSIV ++ +GG V + ++ G KA++ + LA + KD IR N+++ +T +
Sbjct: 141 GSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAK 200
Query: 207 RLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGF 259
+ + ++ R PL+R EEV A+L + +TG+ I VD G+
Sbjct: 201 GVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY 253
|
Length = 257 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 5e-10
Identities = 52/225 (23%), Positives = 86/225 (38%), Gaps = 9/225 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE--WQSKGFVVSGS 71
SL G +VTG RGIG L GA + E EL E + V
Sbjct: 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD 65
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
V D A+ + +E +F G ++++V N G + + + +++ N +
Sbjct: 66 VTDLAA---MQAAAEEAVERF-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVF 121
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
H + P L G ++ +SS+ + + Y A+KA + L E A +
Sbjct: 122 HTVRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVT 180
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTP--LQRVGEPEEVA 234
S + T LV + ++ AR P L+R E+ A
Sbjct: 181 VGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCA 225
|
Length = 296 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 6e-10
Identities = 72/267 (26%), Positives = 107/267 (40%), Gaps = 37/267 (13%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKCLKEWQSKG 65
L G +VTG GIG+A A GA V + + E + G
Sbjct: 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63
Query: 66 --FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
V +G D A D L+ F G L++LVNN G + S EE+ ++
Sbjct: 64 GEAVANGD--DIADWDGAANLVDAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVI 120
Query: 124 TTN----FESTYHLCQLVYPLLKASGV--GSIVFISSVGGLS-HVGSGSIYGATKAAMNQ 176
+ F + H KA I+ SS GL VG G+ Y A KA +
Sbjct: 121 AVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGN-YSAAKAGIAA 179
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGE-----PE 231
LT A E + + N++AP +T + E + F + + P + GE PE
Sbjct: 180 LTLVAAAELGRYGVTVNAIAP-AARTRMTETV-----FAE--MMAKPEE--GEFDAMAPE 229
Query: 232 EVASLVAYLCLPAASYITGQIISVDGG 258
V+ LV +L + +TG++ V+GG
Sbjct: 230 NVSPLVVWLGSAESRDVTGKVFEVEGG 256
|
Length = 286 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 1e-09
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 7/189 (3%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALV G + GIG AT ELA G V +R + + + + ++ G D P
Sbjct: 12 PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP 71
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
D + + + G++ +LV+ G E S E++ + + L V
Sbjct: 72 DSVKSFVAQAEEAL-GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVL 130
Query: 139 PLLKASGVGSIVFISSVGGL---SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
P + G ++F+ S L H+G+ YGA KA + + NL E +R + V
Sbjct: 131 PGMIERRRGDLIFVGSDVALRQRPHMGA---YGAAKAGLEAMVTNLQMELEGTGVRASIV 187
Query: 196 APWYTKTSL 204
P T T +
Sbjct: 188 HPGPTLTGM 196
|
Length = 274 |
| >gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 1e-09
Identities = 50/240 (20%), Positives = 85/240 (35%), Gaps = 26/240 (10%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
LV GG +G A V+ G V S + E + +V S Q
Sbjct: 5 LVYGGRGALGSAVVQAFKSRGWWV--ASIDLAENEE-----ADASIIVLDSDSFTEQAKQ 57
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYS-AEEYSKIMTTNFESTYHLCQLVYP 139
++ V GK++ L+ G S + + + N +++ L
Sbjct: 58 ---VVASVARLS-GKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLATK 113
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW--AKDNIRTNSVAP 197
L + G+ +V + L YGA KAA++QLT++LA E N++ P
Sbjct: 114 HLLSGGL--LVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAILP 171
Query: 198 WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDG 257
T + + + +F E +A L+ + AA +G +I V
Sbjct: 172 VTLDTPANRKAMPDADFSSWT----------PLEFIAELILFWASGAARPKSGSLIPVVT 221
|
Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221 |
| >gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G ++TG + GIGQAT E A GA + +R+E L +E ++ G V
Sbjct: 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPT 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D DQ + L + S F G++++ VNNVG E E + +++ TN
Sbjct: 64 DVTDADQVKALATQAAS-FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRD 122
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD-NIRT 192
P+ K G G + + S+GG + + Y A+K + + L E A +I
Sbjct: 123 AHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHV 182
Query: 193 NSVAPWYTKT 202
V P + T
Sbjct: 183 CDVYPAFMDT 192
|
Length = 330 |
| >gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10 | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 39/173 (22%), Positives = 65/173 (37%), Gaps = 2/173 (1%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK-CLKEWQSKGFVVSGSVCDAAS 77
A V G G+G A A G V +R E +L + + G DA
Sbjct: 1 VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D+ L + + G L +LV N G N+ P +E + + K+ + +
Sbjct: 61 EDEVIALFDLIEEEI-GPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREA 119
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ A G G+I+F + L + + K A+ L +++A E I
Sbjct: 120 AKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGI 172
|
This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238 |
| >gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 2e-09
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
L G TALVTG +RGIG T + LAG GA VV+ + NK + E ++ G S
Sbjct: 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAP-RANKVVAEIEAAGGRASAV 61
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + L+ +F G L+ LV N + E+Y+ M N ++
Sbjct: 62 GADLTDEESVAALMDTAREEF-GGLDALVLNASGGMESGM----DEDYA--MRLNRDAQR 114
Query: 132 HLCQLVYPLLKASGVGSIVFISS 154
+L + PL+ A +VF++S
Sbjct: 115 NLARAALPLMPAG--SRVVFVTS 135
|
Length = 248 |
| >gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 4e-09
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY--SKIMTTNFEST 130
CD AS + E+ + + GK++ +V+ I Y+ +E + T+ +
Sbjct: 62 CDVASDESIERAFATIKERV-GKIDGIVH---------AIAYAKKEELGGNVTDTSRDG- 110
Query: 131 YHLCQLV--YPLLKASGVG--------SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
Y L Q + Y L+ + SIV ++ G + + ++ G KAA+ R
Sbjct: 111 YALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALESSVRY 170
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LA + K IR N+++ KT V + +K+ + + +RT EEV + A+L
Sbjct: 171 LARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFL 230
Query: 241 CLPAASYITGQIISVDGG 258
++ +TG II VD G
Sbjct: 231 LSDLSTGVTGDIIYVDKG 248
|
Length = 252 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 1e-08
Identities = 42/178 (23%), Positives = 63/178 (35%), Gaps = 34/178 (19%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVTGG IG VE L G V R + FV V D
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRL---RDGLDPLLSGVEFV----VLDLTD 53
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D ++L + V +++ + + +A + ++ + N + T +L +
Sbjct: 54 RDLVDELAKGVPD-------AVIHLAA---QSSVPDSNASDPAEFLDVNVDGTLNLLE-- 101
Query: 138 YPLLKASGVGSIVFISSVGG-------------LSHVGSGSIYGATKAAMNQLTRNLA 182
+A+GV VF SSV L + YG +K A QL R A
Sbjct: 102 --AARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYA 157
|
Length = 314 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 1e-08
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 8/186 (4%)
Query: 21 LVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASP 78
L+TG G G ++L LG V+ C K L+ S + V P
Sbjct: 4 LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCSDRLRTLQLDVTK---P 60
Query: 79 DQREKLIQEVGSKFNGK-LNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+Q ++ Q V K L LVNN G ++Y K M N T + +
Sbjct: 61 EQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTKA 120
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
PLL+ + G +V +SS+GG +G Y A+KAA+ + +L E ++ + +
Sbjct: 121 FLPLLRRAK-GRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVKVSIIE 179
Query: 197 PWYTKT 202
P KT
Sbjct: 180 PGNFKT 185
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 1e-08
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDA 75
G ALVTG T GIG+ +LA G + +RN +L QSK +V
Sbjct: 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112
Query: 76 ASPDQREKLIQEVGSKFNG-KLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFESTYH 132
S D E ++ + G + +L+NNVG + E E ++ N E T
Sbjct: 113 FSGDIDEG-VKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTK 171
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSG---SIYGATKAAMNQLTRNLACEWAKDN 189
+ Q V P + G+I+ I S G + S ++Y ATKA ++Q +R L E+ K
Sbjct: 172 VTQAVLPGMLKRKKGAIINIGS-GAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSG 230
Query: 190 IRTNSVAPWYTKTSL 204
I P Y T +
Sbjct: 231 IDVQCQVPLYVATKM 245
|
Length = 320 |
| >gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 2e-08
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS----- 71
G + L+TG GIG+A +A G VH RN+ + KE +++ SG+
Sbjct: 1 GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETE----SGNQNIFL 56
Query: 72 -VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
+ D + P Q + ++E + KL++L+NN G + K E + + K TN T
Sbjct: 57 HIVDMSDPKQVWEFVEEFKEEGK-KLHVLINNAGCMVNKR--ELTEDGLEKNFATNTLGT 113
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLS--------HVGSGSIYGATKAAMNQLTRNLA 182
Y L + P+L+ ++ +SS G L + G A N+ + +
Sbjct: 114 YILTTHLIPVLEKEEDPRVITVSSGGMLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVIM 173
Query: 183 CE-WAKDN--IRTNSVAPWYTKTSLVERLLEN--KEFVDKVIARTPLQRVGEPEEVASLV 237
E WAK + I + + P + T V + + F D++ R+ E+ A V
Sbjct: 174 TEQWAKKHPEIHFSVMHPGWADTPAVRNSMPDFHARFKDRL--RS-------EEQGADTV 224
Query: 238 AYLCLPAAS 246
+L L +A+
Sbjct: 225 VWLALSSAA 233
|
Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255 |
| >gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 3e-08
Identities = 67/264 (25%), Positives = 98/264 (37%), Gaps = 52/264 (19%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-----------------VVHTCSRNEVELNK 56
SL G T +TG +RGIG A A GA +HT + E+E
Sbjct: 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAE-EIE--- 58
Query: 57 CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA 116
+ + V D DQ + + +F G ++I VNN T +
Sbjct: 59 ---AAGGQALPL---VGDVRDEDQVAAAVAKAVERF-GGIDICVNNASAINLTGTEDTPM 111
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------HVGSGSIYGAT 170
+ + + N T+ + Q P LK S I+ +S L H Y
Sbjct: 112 KRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTA----YTMA 167
Query: 171 KAAMNQLTRNLACEWAKDNIRTNSVAP-WYTKTSLVERLLENKEFVDKVIARTPLQRVGE 229
K M+ T LA E+ D I N++ P T+ V LL E + + +RTP
Sbjct: 168 KYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGDEAMRR--SRTP------ 219
Query: 230 PEEVASLVAYLCL--PAASYITGQ 251
E+ + AY L PA + TG
Sbjct: 220 --EIMADAAYEILSRPAREF-TGN 240
|
Length = 273 |
| >gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 3e-08
Identities = 50/232 (21%), Positives = 81/232 (34%), Gaps = 34/232 (14%)
Query: 19 TALVTGGTRGIGQATVEELAGLG----AVVHTCS-----RNEVELNKCLKEWQSKGFVVS 69
T L+TG G G+ LA G A V R E +G +
Sbjct: 4 TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR---------RGLALR 54
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D R + + +++L+NN G ++ E ++ TN
Sbjct: 55 VEKLDLTDAIDRAQAAEW-------DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFG 107
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
L Q + A G G +VF SS+ GL Y A+K A+ + + E
Sbjct: 108 PLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFG 167
Query: 190 IRTNSVAPWYTKTSLVERLLEN--------KEFVDKVIARTPLQRVGEPEEV 233
I+ +V P T + + E + F D PL++ +P+E+
Sbjct: 168 IQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQF-DPQEM 218
|
Length = 257 |
| >gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 4e-08
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMT-TNFESTY 131
CD AS +Q + L +G ++G L+ LV+++G R E A ++ ++ NF +
Sbjct: 63 CDVASDEQIDALFASLGQHWDG-LDGLVHSIGFAPR----EAIAGDFLDGLSRENFRIAH 117
Query: 132 HLCQLVYPLL-KA-----SGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
+ +P L KA S S++ +S +G V + + G KA++ R LA
Sbjct: 118 DISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSL 177
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
IR N ++ KT + + + +D V + PL+R EEV ++ A+L A
Sbjct: 178 GPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLA 237
Query: 246 SYITGQIISVDGGFTANG 263
S +TG+I VD GF A
Sbjct: 238 SGVTGEITHVDSGFNAVV 255
|
Length = 260 |
| >gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 5e-08
Identities = 54/243 (22%), Positives = 86/243 (35%), Gaps = 51/243 (20%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV-CDAASP 78
+V G T IG A + L+ G V T R+ SG D
Sbjct: 1 IIVIGATGTIGLAVAQLLSAHGHEVITAGRS------------------SGDYQVDITDE 42
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY-----SKIMTTNFESTYHL 133
+ L ++V G + +V+ G P E + ++ SK++ +L
Sbjct: 43 ASIKALFEKV-----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLL-----GQINL 92
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P L G GSI S + + G+ A+ R A E + IR N
Sbjct: 93 VRHGLPYL-NDG-GSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG-IRIN 149
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253
+V+P + SL + P E+VA AY+ ++ TGQ++
Sbjct: 150 AVSPGVVEESL-----------EAYGDFFPGFEPVPAEDVAK--AYVRSVEGAF-TGQVL 195
Query: 254 SVD 256
VD
Sbjct: 196 HVD 198
|
Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 51.3 bits (124), Expect = 5e-08
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 15/168 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEV---ELNKCLKEWQSKGFVVSGSVCD 74
T L+TGG G+G+A LA GA + SR+ L E ++ G V+ CD
Sbjct: 2 TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A D ++ + + G L +++ G + E ++ ++ ++L
Sbjct: 62 VADRDALAAVLAAIPAVE-GPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNLH 120
Query: 135 QLVYPL-LKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTR 179
+L L L V SS+ G+ +GS + Y A A ++ L
Sbjct: 121 ELTADLPLDF-----FVLFSSIAGV--LGSPGQANYAAANAFLDALAE 161
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 6e-08
Identities = 41/169 (24%), Positives = 64/169 (37%), Gaps = 14/169 (8%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV-CDAASP 78
AL+ G T GIG+A LAG G + R+ L V + + D A+
Sbjct: 1 ALILGATGGIGRALARALAGRGWRLLLSGRDAGALA------GLAAEVGALARPADVAAE 54
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ L QE+G L++LV G + KP + +I+ N + L +
Sbjct: 55 LEVWALAQELGP-----LDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALV--LKH 107
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
L + +VF+ + L + S Y A KAA+ E
Sbjct: 108 ALALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVRG 156
|
Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206 |
| >gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 8e-08
Identities = 27/118 (22%), Positives = 62/118 (52%)
Query: 148 SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207
+++ +S +G + + ++ G KA++ R +A + +R N+++ +T
Sbjct: 140 ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG 199
Query: 208 LLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANGFN 265
+ + ++ + A TP++R E+V + A+LC ++ I+G+++ VDGGF+ N
Sbjct: 200 IKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN 257
|
Length = 262 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 1e-07
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
T L+TG + G G+A + G VV T R+E + + D
Sbjct: 6 TWLITGVSSGFGRALAQAALAAGHRVVGT-VRSEAARADFEALHPDRALAR---LLDVTD 61
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA-EEYSKIMTTNFESTYHLCQL 136
D + ++ + + F G +++LVNN G + IE S E + N + +
Sbjct: 62 FDAIDAVVADAEATF-GPIDVLVNNAGYG-HEGAIEESPLAEMRRQFEVNVFGAVAMTKA 119
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
V P ++A G IV I+S+GGL + Y +K A+ ++ +LA E A I +V
Sbjct: 120 VLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVE 179
Query: 197 P 197
P
Sbjct: 180 P 180
|
Length = 277 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 1e-07
Identities = 65/250 (26%), Positives = 96/250 (38%), Gaps = 37/250 (14%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC-------LKEWQSKGFVVS 69
G T ++TG GIG+ T ELA GA V R ++ KC ++ + +V
Sbjct: 1 GKTVIITGANTGIGKETARELARRGARVIMACR---DMAKCEEAAAEIRRDTLNHEVIVR 57
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE--YSKIMTTNF 127
D AS E ++ +L++L+NN G +R P YS E + N
Sbjct: 58 H--LDLASLKSIRAFAAEFLAE-EDRLDVLINNAGV-MRCP---YSKTEDGFEMQFGVNH 110
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG---------------SGSIYGATKA 172
+ L L+ LLK S IV +SS L+H +G Y +K
Sbjct: 111 LGHFLLTNLLLDLLKKSAPSRIVNVSS---LAHKAGKINFDDLNSEKSYNTGFAYCQSKL 167
Query: 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEE 232
A TR LA + N++ P +T L + F+ ++ V P E
Sbjct: 168 ANVLFTRELARRLQGTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWPFVKTPRE 227
Query: 233 VASLVAYLCL 242
A YL L
Sbjct: 228 GAQTSIYLAL 237
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 2e-07
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 22/196 (11%)
Query: 20 ALVTGGTRGIGQATVEELA----GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
LVTG +RG G+ +ELA G+V+ +RN+ E + LK G SG
Sbjct: 3 CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARND-EALRQLKA--EIGAERSGLRVVR 59
Query: 76 ASPD--------QREKLIQEVGSKFNGKLNILVNNVGT--NIRKPTIEYS----AEEYSK 121
S D Q K ++E+ + +L+NN GT ++ K ++ S + Y
Sbjct: 60 VSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWA 119
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ T+ + ++V ISS+ + ++Y A KAA + L + L
Sbjct: 120 LNLTSMLCLTSSVLKAFKDSPGLNR-TVVNISSLCAIQPFKGWALYCAGKAARDMLFQVL 178
Query: 182 ACEWAKDNIRTNSVAP 197
A E N+R + AP
Sbjct: 179 ALEEKNPNVRVLNYAP 194
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256 |
| >gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-07
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 14/189 (7%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
TAL+ G +RG+G V+ L G V R + + L+ V D P
Sbjct: 3 TALIIGASRGLGLGLVDRLLERGWQVTATVRG-PQQDTALQALP----GVHIEKLDMNDP 57
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTN--IRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
++L+Q + + + ++L N G + + + +A E ++ TN + L +
Sbjct: 58 ASLDQLLQRLQGQ---RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARR 114
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGS---IYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ ++ G G + F+SS G + G +Y A+KAA+N +TR+ E + +
Sbjct: 115 LLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVL 173
Query: 194 SVAPWYTKT 202
S+ P + KT
Sbjct: 174 SMHPGWVKT 182
|
Length = 225 |
| >gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 18/196 (9%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL-------KEWQSKGFV 67
L G T +TG +RGIG+A + A GA V ++ K +E ++ G
Sbjct: 1 LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
+ D DQ +++ KF G ++ILVNN T++ + Y +M N
Sbjct: 61 ALPCIVDIRDEDQVRAAVEKAVEKFGG-IDILVNNASAISLTGTLDTPMKRYDLMMGVNT 119
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------HVGSGSIYGATKAAMNQLTRNL 181
TY + P LK S I+ +S L+ H Y K M+ +
Sbjct: 120 RGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTA----YTMAKYGMSMCVLGM 175
Query: 182 ACEWAKDNIRTNSVAP 197
A E+ I N++ P
Sbjct: 176 AEEFKPGGIAVNALWP 191
|
This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 3e-07
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 21/219 (9%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDA 75
+ +TG + GIGQA E A GA + +R L V + V DA
Sbjct: 3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDA 62
Query: 76 ASPDQR-EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYS-AEEYSKIMTTNFESTYHL 133
+ I G ++++ N G ++ T E + ++M TN+
Sbjct: 63 DALAAAAADFIAAHGLP-----DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVAT 117
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHV-GSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q ++A+ G++V I+SV G+ + G+G+ Y A+KAA + +L E +R
Sbjct: 118 FQPFIAPMRAARRGTLVGIASVAGVRGLPGAGA-YSASKAAAIKYLESLRVELRPAGVRV 176
Query: 193 NSVAPWYTKTSLVER-------LLENKEFVDKV---IAR 221
++AP Y +T + L++ F + IAR
Sbjct: 177 VTIAPGYIRTPMTAHNPYPMPFLMDADRFAARAARAIAR 215
|
Length = 257 |
| >gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 5e-07
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 126 NFESTYHLCQLVYPLLKASGV--------GSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177
NF ++ H+ Y LL+ S GSIV ++ G + + ++ G KAA+
Sbjct: 113 NFHNSLHIS--CYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAALEAS 170
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLV 237
+ LA + ++NIR N+++ KT + + + A PL+R E+V
Sbjct: 171 VKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAA 230
Query: 238 AYLCLPAASYITGQIISVDGGFTANGFN 265
YL + +TG+I VD G+ G N
Sbjct: 231 VYLFSELSKGVTGEIHYVDCGYNIMGSN 258
|
Length = 260 |
| >gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 5e-07
Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 42/256 (16%)
Query: 18 MTALVTGGTRGIGQATVEELAG--LGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVCD 74
M L+ GG+ GIG+A V++L A VH R+ ++Q + V D
Sbjct: 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHK------PDFQHDNVQWHALDVTD 54
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG---TNIRKPTIEYS-----AEEYSKIMTTN 126
A Q + + L+ L+N VG T + P E S A+ + + +T N
Sbjct: 55 EAEIKQLSEQFTQ--------LDWLINCVGMLHTQDKGP--EKSLQALDADFFLQNITLN 104
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISS-VGGLS--HVGSGSIYGATKAAMNQLTRNLAC 183
+ L + P LK S IS+ VG +S +G Y A+KAA+N + L+
Sbjct: 105 TLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSI 164
Query: 184 EWAKD--NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
EW + + ++ P T T+L +K F V P ++ PE VA + +
Sbjct: 165 EWQRSLKHGVVLALHPGTTDTAL------SKPFQQNV----PKGKLFTPEYVAQCLLGII 214
Query: 242 LPAASYITGQIISVDG 257
A +G ++ DG
Sbjct: 215 ANATPAQSGSFLAYDG 230
|
Length = 235 |
| >gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 8e-07
Identities = 63/250 (25%), Positives = 93/250 (37%), Gaps = 34/250 (13%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
+ LVTGG +G+ E G V +L KE V VCD
Sbjct: 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELD-----VDAIVCDNTD 55
Query: 78 PDQREKLIQEVGSKFNGKLNILVNN-----VGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
P ++E F L+ +VN + R ++ +A + + S
Sbjct: 56 PAS----LEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVL 111
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q V L+ SG GSI+ + +GS A KAA++ T A + I
Sbjct: 112 TVQSVGDHLR-SG-GSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAAVFGTRGITI 165
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N+VA + + L +RTP E +A L +L PAA +ITGQ
Sbjct: 166 NAVACGRSVQPGYDGL-----------SRTPPPVAAE---IARLALFLTTPAARHITGQT 211
Query: 253 ISVDGGFTAN 262
+ V G A+
Sbjct: 212 LHVSHGALAH 221
|
Length = 223 |
| >gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 19/197 (9%)
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNFE 128
CD + + + + K+ GKL+ +V+ +G + ++ S + ++ M +
Sbjct: 67 CDVTDEASIDAVFETLEKKW-GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVY 125
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
S + Q L+ G SI+ ++ G + ++ G KAA+ + LA +
Sbjct: 126 SFTAVAQRAEKLMTDGG--SILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPK 183
Query: 189 NIRTNSVAPWYTKTSLV------ERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
NIR N+++ KT +L+ E+ PL+R EEV YL
Sbjct: 184 NIRVNAISAGPIKTLAASGIGDFRYILKWNEY------NAPLRRTVTIEEVGDSALYLLS 237
Query: 243 PAASYITGQIISVDGGF 259
+ +TG++ VD G+
Sbjct: 238 DLSRGVTGEVHHVDSGY 254
|
Length = 272 |
| >gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 3e-06
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
T L+ G +RGIG+ V + G V +R+ L L+ ++ + D A P
Sbjct: 3 TVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA-LQALGAEALAL-----DVADP 56
Query: 79 DQREKLIQEVGSKFNG-KLNILVNNVGTNIRKPTIE----YSAEEYSKIMTTNFESTYHL 133
+ + K +G L+ V G + P E + E++ +M TN L
Sbjct: 57 AS----VAGLAWKLDGEALDAAVYVAG--VYGPRTEGVEPITREDFDAVMHTNVLGPMQL 110
Query: 134 CQLVYPLLKASGVGSIVFISS----VGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
++ PL++A+G G + +SS +G + G +Y A+KAA+N R + +
Sbjct: 111 LPILLPLVEAAG-GVLAVLSSRMGSIGDATGTT-GWLYRASKAALNDALRAASLQA 164
|
Length = 222 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 3e-06
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 18/250 (7%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASP 78
++TG ++G+G+A +L G V + SR E EL K +++ S S D
Sbjct: 4 VIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHS---LDLQDV 60
Query: 79 DQREKLIQEVGS---KFNGKLNILVNNVG--TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ E E+ S + N L+NN G I KP + +EE + N + L
Sbjct: 61 HELETNFNEILSSIQEDNVSSIHLINNAGMVAPI-KPIEKAESEELITNVHLNLLAPMIL 119
Query: 134 CQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN--I 190
K ++ ISS + S Y ++KA ++ T+ +A E ++ +
Sbjct: 120 TSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPV 179
Query: 191 RTNSVAPWYTKTSLVE--RLLENKEF--VDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
+ + +P T++ R ++F +D+ I ++ PE VA + L L
Sbjct: 180 KIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNL-LETED 238
Query: 247 YITGQIISVD 256
+ G++I +D
Sbjct: 239 FPNGEVIDID 248
|
Length = 251 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 6e-06
Identities = 41/176 (23%), Positives = 60/176 (34%), Gaps = 36/176 (20%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
LVTGGT IG V L G +V R LN + D
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFH---------EGDLTD 51
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
PD E+L+ EV + + +++ + + E A+ + N T L +
Sbjct: 52 PDALERLLAEV------QPDAVIHLAAQSGVGASFEDPAD----FIRANVLGTLRLLE-- 99
Query: 138 YPLLKASGVGSIVFISSVG-----------GLSHVGSGSIYGATKAAMNQLTRNLA 182
+ +GV VF SS + +G S Y A K A +L A
Sbjct: 100 --AARRAGVKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYA 153
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 9e-06
Identities = 46/147 (31%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 129 STYHLCQL---VYPLLKASGVGSIVFISSVGGLSHVGSGS--IY---GATKAAMNQLTRN 180
S Y L L + PL+ G SIV GL + + Y G KAA+ R
Sbjct: 120 SAYSLKSLAKALLPLMNEGG--SIV------GLDFDATVAWPAYDWMGVAKAALESTNRY 171
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ-RVGEPEEVASLVAY 239
LA + IR N VA +T + + + + R PL V +P VA V
Sbjct: 172 LARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVA 231
Query: 240 LC---LPAASYITGQIISVDGGFTANG 263
L PA TG+I+ VDGG A G
Sbjct: 232 LLSDWFPA---TTGEIVHVDGGAHAMG 255
|
Length = 256 |
| >gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 1e-05
Identities = 61/259 (23%), Positives = 99/259 (38%), Gaps = 61/259 (23%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRN--------------EVELNKCLKEWQS 63
+ A+VTG +RG+G A E+L G V +R+ EVEL+ L + +
Sbjct: 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELD--LSDAAA 59
Query: 64 KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGT-NIRKPTIEYSAEEYSKI 122
++G + A L L+NN GT P A ++
Sbjct: 60 AAAWLAGDLLAAFVDGASRVL--------------LINNAGTVEPIGPLATLDAAAIARA 105
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGS---------IVFISSVGGLSHVGSGSIYGATKAA 173
+ N + PL+ + + I+ ISS + S+Y ATKAA
Sbjct: 106 VGLN---------VAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA 156
Query: 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE--RLLENKEF--VDKVIARTPLQRVGE 229
++ R +A + A +R S+AP T + R + + F ++ L+ G
Sbjct: 157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRE---LKASGA 212
Query: 230 ---PEEVAS-LVAYLCLPA 244
PE+ A L+AYL
Sbjct: 213 LSTPEDAARRLIAYLLSDD 231
|
Length = 243 |
| >gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 21/149 (14%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV------ELNKCLKEWQSKGFV 67
L G TA+VTGG G+G T LA GA V+ R +V ++
Sbjct: 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG----------- 72
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
V + D A + + +++IL+NN G + + + TN
Sbjct: 73 VEVVMLDLADLESVRAFAERFLDSGR-RIDILINNAG--VMACPETRVGDGWEAQFATNH 129
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVG 156
+ L L++P L A +V +SS G
Sbjct: 130 LGHFALVNLLWPALAAGAGARVVALSSAG 158
|
Length = 315 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 3e-05
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 10/187 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
T +TG + G G+ E L G V R L+ + + +V+ V D+A+
Sbjct: 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAA- 62
Query: 79 DQREKLIQE-VGSKFN--GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
++ V F G+++++V+N G + E S + + + TN + + +
Sbjct: 63 ------VRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIR 116
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
P L+ G G IV +SS GG S+Y ATK + +A E A I V
Sbjct: 117 AALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIV 176
Query: 196 APWYTKT 202
P +T
Sbjct: 177 EPGPART 183
|
Length = 276 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-05
Identities = 37/166 (22%), Positives = 57/166 (34%), Gaps = 34/166 (20%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
L+ G T IG+A EL G V RN L+K +E V+ D D
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQE------PVAVVEGDLRDLD 54
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
+Q V +++++ G + E T ++ +
Sbjct: 55 SLSDAVQGV--------DVVIHLAGAPRDTRDFC----------EVDVEGTRNVLE---- 92
Query: 140 LLKASGVGSIVFISSVGGLSHVGSG------SIYGATKAAMNQLTR 179
K +GV +FISS+G + S Y A KA + R
Sbjct: 93 AAKEAGVKHFIFISSLGAYGDLHEETEPSPSSPYLAVKAKTEAVLR 138
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 5e-05
Identities = 44/195 (22%), Positives = 74/195 (37%), Gaps = 22/195 (11%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
L+TG T GIG+ + A G V C RN+ L++ L + F ++ V D P
Sbjct: 3 AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE-LHTQSANIFTLAFDVTD--HP 59
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY------SAEEYSKIMTTNFESTYH 132
+ L S+ + + N G EY A +++ N +
Sbjct: 60 GTKAAL-----SQLPFIPELWIFNAGD------CEYMDDGKVDATLMARVFNVNVLGVAN 108
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ + P L +V + S+ + YGA+KAA+ R L + I
Sbjct: 109 CIEGIQPHLSCGH--RVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEV 166
Query: 193 NSVAPWYTKTSLVER 207
+V P + T L ++
Sbjct: 167 VTVFPGFVATPLTDK 181
|
Length = 240 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 41.7 bits (99), Expect = 9e-05
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEV---ELNKCLKEWQSKGFVVSGSV 72
T LVTGG G+G LA GA V+ SR+ E L E +++G V+
Sbjct: 2 TYLVTGGLGGLGLELARWLAERGARHLVL--LSRSGAPDPEAEALLAELEARGAEVTVVA 59
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD + D L+ E+ + L +++ G +AE++++++ ++
Sbjct: 60 CDVSDRDAVRALLAEIRADG-PPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWN 118
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQL 177
L + + + V SS+ G+ +GS + Y A A ++ L
Sbjct: 119 LHE----ATRDRPLDFFVLFSSIAGV--LGSPGQANYAAANAFLDAL 159
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK---EWQSKGFVVSGSVCDAAS 77
L+TG + G+G E A G + C+R L + LK + G V+ + D
Sbjct: 6 LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEE-LKAELLARYPGIKVAVAALDVND 64
Query: 78 PDQREKLIQEVGSKFNGKLNILVN-------NVGT---NIRKPTIEYSAEEYSKIMTTNF 127
DQ ++ E + G ++VN +GT K T E TNF
Sbjct: 65 HDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAE-----------TNF 113
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGSIYGATKAAMNQLTRNLACEWA 186
+ C+ + + G G +V ISSV + + G + Y A+KA + L L E A
Sbjct: 114 VAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELA 173
Query: 187 KDNIRTNSVAPWYTKTSLVER 207
K I+ +++ P Y ++ + +
Sbjct: 174 KTPIKVSTIEPGYIRSEMNAK 194
|
Length = 248 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 21 LVTGGTRGIGQATVEELA-GLGAVVHTCSR---NEVELNK--CLKEWQSKG---FVVSGS 71
LVTGG GIG+A LA GA + R E K L ++ G +S
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISAD 268
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY-SAEEYSKIMTTNFEST 130
V DAA+ + L+++V ++ G ++ +++ G +R + +AE++ ++ +
Sbjct: 269 VTDAAAVRR---LLEKVRERY-GAIDGVIHAAGV-LRDALLAQKTAEDFEAVLAPKVDGL 323
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164
+L Q L + V SSV + G
Sbjct: 324 LNLAQ----ALADEPLDFFVLFSSV--SAFFGGA 351
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 7/74 (9%)
Query: 21 LVTGGTRGIGQATVEELAGLGA---VVHTCSRN--EVELNKCLKEWQSKGFVVSGSVCDA 75
L+TGG G+G LA GA V+ SR ++ G VS CD
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVL--LSRRGPAPRAAARAALLRAGGARVSVVRCDV 211
Query: 76 ASPDQREKLIQEVG 89
P L+ E+
Sbjct: 212 TDPAALAALLAELA 225
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375 |
| >gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 9e-04
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------EVELNKCLKEWQS---- 63
L+G ALV G TRG G+ EL GA V+ R+ E + + ++E
Sbjct: 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA 64
Query: 64 ---KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNV 103
+G V D P+Q L++ + + G+L+ILVN++
Sbjct: 65 AGGRGIAVQ---VDHLVPEQVRALVERIDRE-QGRLDILVNDI 103
|
Length = 305 |
| >gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.001
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSK 121
FV+ V D AS D + + + K+ GKL+ +V+ +G ++ + + E +S+
Sbjct: 60 FVLPCDVEDIASVD---AVFEALEKKW-GKLDFVVHAIGFSDKNELKGRYADTTRENFSR 115
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
M + S + + L+ G S++ ++ G + + ++ G KAA+ R L
Sbjct: 116 TMVISCFSFTEIAKRAAKLMPDGG--SMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYL 173
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
A ++ IR N+++ +T + + + +PL+R +EV YL
Sbjct: 174 AADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLL 233
Query: 242 LPAASYITGQIISVDGGF 259
+S +TG+I VD G+
Sbjct: 234 SDLSSGVTGEIHFVDSGY 251
|
Length = 271 |
| >gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.001
Identities = 50/184 (27%), Positives = 74/184 (40%), Gaps = 16/184 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC---D 74
+ L+TG + GIG L G V TC R E ++ E G D
Sbjct: 6 SILITGCSSGIGAYCARALQSDGWRVFATC-RKEEDVAALEAE---------GLEAFQLD 55
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFESTYHL 133
A P+ L+ +V G+L+ L NN G + +E E NF + L
Sbjct: 56 YAEPESIAALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFEANFFGWHDL 114
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ V P+++ G G IV SS+ GL + Y A+K A+ L+ L E I +
Sbjct: 115 TRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVS 174
Query: 194 SVAP 197
+ P
Sbjct: 175 LIEP 178
|
Length = 277 |
| >gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 34/133 (25%), Positives = 48/133 (36%), Gaps = 14/133 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC----D 74
T ++TG + G+G + LA G V RN L K Q G S D
Sbjct: 8 TVIITGASSGVGLYAAKALAKRGWHVIMACRN---LKKAEAAAQELGIP-PDSYTIIHID 63
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI---EYSAEEYSKIMTTNFESTY 131
D + + + L+ LV N + P + S + Y M TN +
Sbjct: 64 LGDLDSVRRFVDDF-RALGKPLDALVCNAA--VYMPLLKEPLRSPQGYELSMATNHLGHF 120
Query: 132 HLCQLVYPLLKAS 144
LC L+ LK S
Sbjct: 121 LLCNLLLEDLKKS 133
|
Length = 322 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 37.6 bits (87), Expect = 0.004
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50
M LVTG T +G A V EL G V RN
Sbjct: 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRN 33
|
Length = 275 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 272 | |||
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 100.0 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 100.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 100.0 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 100.0 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 100.0 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 100.0 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN00015 | 308 | protochlorophyllide reductase | 100.0 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 100.0 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 100.0 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 100.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 100.0 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 100.0 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 100.0 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 100.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 100.0 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 100.0 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 100.0 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 100.0 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 100.0 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 100.0 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 100.0 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.98 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.98 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.98 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.97 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.95 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.94 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.93 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.93 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.92 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.91 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.9 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.9 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.89 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.89 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.89 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.88 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.88 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.87 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.86 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.86 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.86 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.86 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.86 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.86 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.85 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.85 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.85 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.84 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.84 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.84 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.84 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.83 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.83 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.83 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.81 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.8 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.8 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.8 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.8 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.78 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.78 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.78 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.77 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.77 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.75 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.75 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.75 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.74 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.74 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.72 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.72 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.71 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.7 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.7 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.69 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.69 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.67 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.67 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.65 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.65 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.61 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.6 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.56 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.55 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.55 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.52 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.52 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.52 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.48 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.48 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.45 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.43 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.42 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.39 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.36 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.36 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.35 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.34 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.34 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.31 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.29 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.28 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 99.21 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.21 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.09 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.02 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.84 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.83 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.8 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.79 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.75 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.73 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.72 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.72 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.64 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.57 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.55 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.53 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.39 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.38 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.37 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.35 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.34 | |
| PLN00106 | 323 | malate dehydrogenase | 98.32 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.3 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.29 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.29 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.19 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.97 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.97 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.9 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.9 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.9 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.86 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.83 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.83 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.82 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.77 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.73 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.7 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.68 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.68 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.68 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.66 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.62 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.6 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.57 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.56 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.56 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.54 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.53 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.51 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.5 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.48 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.43 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.4 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.38 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.38 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.35 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.34 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.34 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.34 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.31 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 97.29 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.26 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 97.14 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.09 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 97.09 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.08 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 97.08 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 97.07 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 97.07 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 97.02 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 97.01 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.01 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 96.99 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 96.99 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.97 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 96.96 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.96 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.95 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.94 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.93 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.91 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.91 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.87 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.86 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.85 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.83 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.81 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 96.79 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.78 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.78 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.78 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.75 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.74 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.72 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.72 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 96.69 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.68 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.66 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 96.63 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.63 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.63 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.57 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 96.52 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.5 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.49 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.48 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.48 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.45 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 96.45 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.44 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.43 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 96.43 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.43 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.42 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.4 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.4 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.4 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.35 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.31 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 96.31 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.27 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.27 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.27 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 96.26 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.25 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.24 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.23 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.18 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.18 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.17 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 96.16 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.16 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.14 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.13 | |
| COG3007 | 398 | Uncharacterized paraquat-inducible protein B [Func | 96.12 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 96.1 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.09 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.09 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.08 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.06 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.06 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 96.05 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 96.05 | |
| PF12076 | 164 | Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194 | 95.99 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 95.99 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 95.97 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 95.95 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 95.95 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.92 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 95.92 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.91 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 95.89 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.87 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 95.87 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 95.86 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 95.86 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 95.81 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.81 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 95.78 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.78 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 95.77 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 95.76 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 95.75 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 95.75 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 95.75 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 95.74 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 95.74 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 95.72 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 95.72 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 95.7 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 95.7 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 95.67 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.67 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 95.66 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.65 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 95.65 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 95.61 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 95.61 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 95.6 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.57 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 95.57 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 95.56 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 95.55 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 95.52 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.52 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 95.52 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.52 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 95.52 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.5 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 95.46 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 95.42 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 95.4 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.39 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 95.38 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 95.37 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.34 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 95.34 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.26 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 95.25 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 95.24 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 95.22 | |
| PRK02006 | 498 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.18 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 95.18 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 95.14 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 95.14 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 95.09 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 95.09 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 95.05 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 95.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 95.0 |
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-49 Score=332.51 Aligned_cols=250 Identities=29% Similarity=0.393 Sum_probs=223.6
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
++++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++..+.+|++|+++++++++++.
T Consensus 3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~- 81 (263)
T PRK08339 3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK- 81 (263)
T ss_pred ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-
Confidence 45689999999999999999999999999999999999999888888777543 4578889999999999999999986
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
++ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|+++
T Consensus 82 ~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~as 160 (263)
T PRK08339 82 NI-GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVV 160 (263)
T ss_pred hh-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHH
Confidence 46 68999999999877778888999999999999999999999999999998888999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
|+|+++|+++++.|++++|||||+|+||+++|++...... .++.........|.+++.+|+|+++++.||+
T Consensus 161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~ 240 (263)
T PRK08339 161 RISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLA 240 (263)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998754321 1223334455678999999999999999999
Q ss_pred cCCCCCccccEEEeCCCcCCCC
Q 024125 242 LPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
++.+.++||+++.+|||+..+-
T Consensus 241 s~~~~~itG~~~~vdgG~~~~~ 262 (263)
T PRK08339 241 SDLGSYINGAMIPVDGGRLNSV 262 (263)
T ss_pred cchhcCccCceEEECCCccccC
Confidence 9999999999999999988763
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-49 Score=306.78 Aligned_cols=244 Identities=29% Similarity=0.419 Sum_probs=225.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.++.|+++||||++|||+++++.|+++|++|++.+++.+..++....+...+ .-..+.||+++.++++..++++.+.+
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~- 88 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSL- 88 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhc-
Confidence 3678999999999999999999999999999999999998888888776543 44567999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--cCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK--ASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~--~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++++++||||+.....+.....++|+..+.+|+.|.|.++|+++..|- ++...+|||+||+.+..+..+...|+++|
T Consensus 89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK 168 (256)
T KOG1200|consen 89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASK 168 (256)
T ss_pred CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhc
Confidence 6999999999998888888999999999999999999999999999843 33445999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+++.+|+|+.++|++.++||||.|.||++.|||+... +++..+++..++|+++++.+||+|+.+.||+|+.+.|+||+
T Consensus 169 ~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m--p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~ 246 (256)
T KOG1200|consen 169 GGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM--PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGT 246 (256)
T ss_pred CceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc--CHHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccce
Confidence 9999999999999999999999999999999999887 45778899999999999999999999999999999999999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
.+-++||..+
T Consensus 247 t~evtGGl~m 256 (256)
T KOG1200|consen 247 TLEVTGGLAM 256 (256)
T ss_pred eEEEeccccC
Confidence 9999999764
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-48 Score=325.05 Aligned_cols=246 Identities=27% Similarity=0.414 Sum_probs=218.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.. ++..++++..+.++..+.+|+++.++++++++++.+.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 4688999999999999999999999999999999988643 33444555556688889999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.+....|++||
T Consensus 82 -g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK 160 (251)
T PRK12481 82 -GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK 160 (251)
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence 6899999999987777888899999999999999999999999999997764 58999999999988888889999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+|+++|+++++.|+.++||+||+|+||+++|++.......+..........|.+++.+|+|+++++.||+++.+.+++|+
T Consensus 161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~ 240 (251)
T PRK12481 161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGY 240 (251)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCc
Confidence 99999999999999999999999999999999976553333333445567789999999999999999999999999999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
+|.+|||+..
T Consensus 241 ~i~vdgg~~~ 250 (251)
T PRK12481 241 TLAVDGGWLA 250 (251)
T ss_pred eEEECCCEec
Confidence 9999999754
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-47 Score=323.26 Aligned_cols=251 Identities=28% Similarity=0.445 Sum_probs=225.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh--CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. .+.++.++.+|++++++++++++++.+.
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999998888888876 4567888999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|++|||||.....+..+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++..+|++||
T Consensus 84 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (260)
T PRK07063 84 F-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAK 162 (260)
T ss_pred h-CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHH
Confidence 8 689999999998766667778899999999999999999999999999888778999999999998888999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CHH-HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NKE-FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+|+++|+++++.|++++||+||+|+||+++|++...... .++ .........|.+++.+|+|+++.+.||+++.+.+
T Consensus 163 aa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~ 242 (260)
T PRK07063 163 HGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPF 242 (260)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccc
Confidence 999999999999999999999999999999999765422 112 2333455678899999999999999999999999
Q ss_pred ccccEEEeCCCcCCCCCC
Q 024125 248 ITGQIISVDGGFTANGFN 265 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~~~ 265 (272)
+||+++.+|||+++.+.|
T Consensus 243 itG~~i~vdgg~~~~~~~ 260 (260)
T PRK07063 243 INATCITIDGGRSVLYHD 260 (260)
T ss_pred cCCcEEEECCCeeeeccC
Confidence 999999999999887765
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-47 Score=326.73 Aligned_cols=247 Identities=25% Similarity=0.311 Sum_probs=208.5
Q ss_pred CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH-hCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 13 ~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
|.+++|++|||||+ +|||+++|++|+++|++|++++|+.+ .++..+++. +.+.. ..+++|++|.++++++++++.
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence 45789999999997 89999999999999999999999853 222233332 22333 568999999999999999999
Q ss_pred HHcCCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh
Q 024125 90 SKFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~ 165 (272)
+++ +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|+++ |+||++||..+..+.+...
T Consensus 79 ~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~~~~~ 155 (274)
T PRK08415 79 KDL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKYVPHYN 155 (274)
T ss_pred HHc-CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccCCCcch
Confidence 998 79999999999754 2567888999999999999999999999999999753 7999999999888888889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
.|++||+|+.+|+++++.|+.++||+||+|+||+++|++..................|+++..+|+|+++++.||+++..
T Consensus 156 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~ 235 (274)
T PRK08415 156 VMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLS 235 (274)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999998865331111111122335688899999999999999999999
Q ss_pred CCccccEEEeCCCcCCCCC
Q 024125 246 SYITGQIISVDGGFTANGF 264 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~~~ 264 (272)
.++||+++.+|||+.+.++
T Consensus 236 ~~itG~~i~vdGG~~~~~~ 254 (274)
T PRK08415 236 SGVTGEIHYVDAGYNIMGM 254 (274)
T ss_pred hcccccEEEEcCcccccCC
Confidence 9999999999999887644
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-47 Score=322.11 Aligned_cols=246 Identities=24% Similarity=0.314 Sum_probs=210.7
Q ss_pred CCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 15 l~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++|++|||||++ |||+++++.|+++|++|++++|+. ..++..+++... +.. ..+++|++|+++++++++++.++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~-~~~~~Dv~~~~~v~~~~~~~~~~ 83 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCN-FVSELDVTNPKSISNLFDDIKEK 83 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCc-eEEEccCCCHHHHHHHHHHHHHH
Confidence 6789999999998 999999999999999999999874 334444444433 333 45789999999999999999999
Q ss_pred cCCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 92 FNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 92 ~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+ +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|++ .|+||++||..+..+.+....|
T Consensus 84 ~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y 160 (260)
T PRK06603 84 W-GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVM 160 (260)
T ss_pred c-CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccch
Confidence 8 69999999999753 246778899999999999999999999999999964 3899999999988888888999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+++|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+++++.||+++.+.+
T Consensus 161 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~ 240 (260)
T PRK06603 161 GVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKG 240 (260)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccc
Confidence 99999999999999999999999999999999999986433222223334445678899999999999999999999999
Q ss_pred ccccEEEeCCCcCCCCCC
Q 024125 248 ITGQIISVDGGFTANGFN 265 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~~~ 265 (272)
+||+++.+|||+.+.+.+
T Consensus 241 itG~~i~vdgG~~~~~~~ 258 (260)
T PRK06603 241 VTGEIHYVDCGYNIMGSN 258 (260)
T ss_pred CcceEEEeCCcccccCcC
Confidence 999999999999887654
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-47 Score=324.69 Aligned_cols=246 Identities=21% Similarity=0.274 Sum_probs=208.4
Q ss_pred CCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++|++|||||++ |||+++|++|+++|++|++++|+.+..+...+...+.+. ...+++|++|.++++++++++.++
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKK 82 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHH
Confidence 36899999999997 999999999999999999999886443333222222232 346899999999999999999999
Q ss_pred cCCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 92 FNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+ +++|++|||||+... .++.+.+.++|++++++|+.+++.++++++|+|++ .|+||++||..+..+.+.+..|
T Consensus 83 ~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y 159 (271)
T PRK06505 83 W-GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVM 159 (271)
T ss_pred h-CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchh
Confidence 8 699999999997543 46778899999999999999999999999999974 3899999999988888889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+.+|+++++.|++++|||||+|+||+++|++..................|.+++.+|+|++++++||+++.+.+
T Consensus 160 ~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~ 239 (271)
T PRK06505 160 GVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSG 239 (271)
T ss_pred hhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccc
Confidence 99999999999999999999999999999999999986433211122233344568889999999999999999999999
Q ss_pred ccccEEEeCCCcCCCC
Q 024125 248 ITGQIISVDGGFTANG 263 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~ 263 (272)
+||++|.+|||+.+..
T Consensus 240 itG~~i~vdgG~~~~~ 255 (271)
T PRK06505 240 VTGEIHFVDSGYNIVS 255 (271)
T ss_pred cCceEEeecCCcccCC
Confidence 9999999999987654
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-47 Score=322.60 Aligned_cols=241 Identities=24% Similarity=0.291 Sum_probs=210.9
Q ss_pred CCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++|||||+ +|||++++++|+++|++|++++|+. +.++..+++. ..++..+++|++|.++++++++++.+++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 689999999999 8999999999999999999999984 4444444432 2357788999999999999999999988
Q ss_pred CCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 93 NGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 93 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+++|++|||||...+ .++.+.+.++|++.+++|+.+++.++++++|+|++ .|+||++||..+..+.+++..|+
T Consensus 82 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~ 158 (252)
T PRK06079 82 -GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMG 158 (252)
T ss_pred -CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhH
Confidence 699999999997543 57788899999999999999999999999999964 38999999999988888899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+|+++|+++++.|++++||+||+|+||+++|++.......++..+......|.+++.+|+|+++++.||+++...++
T Consensus 159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~i 238 (252)
T PRK06079 159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGV 238 (252)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccc
Confidence 99999999999999999999999999999999999865443223334445566788999999999999999999999999
Q ss_pred cccEEEeCCCcCC
Q 024125 249 TGQIISVDGGFTA 261 (272)
Q Consensus 249 ~G~~i~~dgG~~~ 261 (272)
+|+++.+|||+++
T Consensus 239 tG~~i~vdgg~~~ 251 (252)
T PRK06079 239 TGDIIYVDKGVHL 251 (252)
T ss_pred cccEEEeCCceec
Confidence 9999999999764
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-47 Score=323.24 Aligned_cols=249 Identities=28% Similarity=0.347 Sum_probs=214.3
Q ss_pred CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChH--HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 13 ~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+++++|++|||||+ +|||++++++|+++|++|++++|+.+ +.++..+++.+....+..+++|++|.++++++++++
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence 35789999999986 89999999999999999998876543 344455555544445677899999999999999999
Q ss_pred HHHcCCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC
Q 024125 89 GSKFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~ 164 (272)
.+++ +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|++ .|+||++||..+..+.++.
T Consensus 82 ~~~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~ 158 (258)
T PRK07370 82 KQKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNY 158 (258)
T ss_pred HHHc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCccc
Confidence 9998 69999999999753 356778899999999999999999999999999975 3899999999998888899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
..|++||+|+++|+++++.|++++||+||+|+||+++|++...+...++.........|.+++.+|+|+++++.||+++.
T Consensus 159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~ 238 (258)
T PRK07370 159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDL 238 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChh
Confidence 99999999999999999999999999999999999999986543222233344455678899999999999999999999
Q ss_pred CCCccccEEEeCCCcCCCCC
Q 024125 245 ASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~~~ 264 (272)
..+++|+++.+|||+.+.|+
T Consensus 239 ~~~~tG~~i~vdgg~~~~~~ 258 (258)
T PRK07370 239 ASGITGQTIYVDAGYCIMGM 258 (258)
T ss_pred hccccCcEEEECCcccccCC
Confidence 99999999999999887653
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-47 Score=319.14 Aligned_cols=246 Identities=33% Similarity=0.480 Sum_probs=218.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++..+.+|++++++++++++++.+.+
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999999888888887766788889999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCC-C-CChhhHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHV-G-SGSIYGA 169 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~-~-~~~~Y~~ 169 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..+.... + ....|++
T Consensus 85 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~a 163 (253)
T PRK05867 85 -GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCA 163 (253)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHH
Confidence 6899999999987777888889999999999999999999999999997764 4799999998775432 2 4578999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
||+|+++|++++++|+.++||+||+|+||+++|++..... +.........|.+++.+|+|+++++.||+++...++|
T Consensus 164 sKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~t 240 (253)
T PRK05867 164 SKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT---EYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMT 240 (253)
T ss_pred HHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcC
Confidence 9999999999999999999999999999999999875432 2233344567889999999999999999999999999
Q ss_pred ccEEEeCCCcCCC
Q 024125 250 GQIISVDGGFTAN 262 (272)
Q Consensus 250 G~~i~~dgG~~~~ 262 (272)
|++|.+|||++++
T Consensus 241 G~~i~vdgG~~~~ 253 (253)
T PRK05867 241 GSDIVIDGGYTCP 253 (253)
T ss_pred CCeEEECCCccCc
Confidence 9999999998753
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-47 Score=319.48 Aligned_cols=249 Identities=23% Similarity=0.342 Sum_probs=211.6
Q ss_pred CCCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+.++++||++|||||+ +|||++++++|+++|++|++++|+.+..+.+ +++.+....+..+++|++|.++++++++++
T Consensus 4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 82 (258)
T PRK07533 4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYV-EPLAEELDAPIFLPLDVREPGQLEAVFARI 82 (258)
T ss_pred cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHH-HHHHHhhccceEEecCcCCHHHHHHHHHHH
Confidence 3466899999999999 5999999999999999999999986432222 222221123457899999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC
Q 024125 89 GSKFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~ 164 (272)
.+++ +++|++|||||.... .++.+.+.++|++++++|+.+++.+++.++|+|++ .|+||++||..+..+.+..
T Consensus 83 ~~~~-g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~ 159 (258)
T PRK07533 83 AEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENY 159 (258)
T ss_pred HHHc-CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccc
Confidence 9998 699999999997542 56778899999999999999999999999999964 3899999999988888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
..|++||+|+.+|+++++.|++++||+||+|+||+++|++........+.........|.++..+|+|+++.+.||+++.
T Consensus 160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~ 239 (258)
T PRK07533 160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDA 239 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChh
Confidence 99999999999999999999999999999999999999997644222333344455678899999999999999999998
Q ss_pred CCCccccEEEeCCCcCCCC
Q 024125 245 ASYITGQIISVDGGFTANG 263 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~~ 263 (272)
..+++|+.+.+|||+++.|
T Consensus 240 ~~~itG~~i~vdgg~~~~~ 258 (258)
T PRK07533 240 ARRLTGNTLYIDGGYHIVG 258 (258)
T ss_pred hccccCcEEeeCCcccccC
Confidence 9999999999999987643
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-47 Score=320.00 Aligned_cols=246 Identities=24% Similarity=0.317 Sum_probs=210.1
Q ss_pred CCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa--~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++||||| ++|||+++|+.|+++|++|++++|+. +.++..+++.........+++|++|.++++++++++.+++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 68999999997 67999999999999999999988763 3444444444332334578999999999999999999998
Q ss_pred CCCccEEEECCCCCCCC----C-CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 93 NGKLNILVNNVGTNIRK----P-TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++|++|||||+.... + +++.+.++|++++++|+.+++.++++++|.|++++ |+||++||..+..+.+++..|
T Consensus 83 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~~~~~~~~~Y 160 (261)
T PRK08690 83 -DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAVRAIPNYNVM 160 (261)
T ss_pred -CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccccCCCCcccc
Confidence 6899999999986432 2 34678889999999999999999999999997654 899999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+++|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+|+++.||+++.+.+
T Consensus 161 ~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~ 240 (261)
T PRK08690 161 GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSG 240 (261)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence 99999999999999999999999999999999999987654322333334445678999999999999999999999999
Q ss_pred ccccEEEeCCCcCCCC
Q 024125 248 ITGQIISVDGGFTANG 263 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~ 263 (272)
++|++|.+|||+.+..
T Consensus 241 ~tG~~i~vdgG~~~~~ 256 (261)
T PRK08690 241 ITGEITYVDGGYSINA 256 (261)
T ss_pred cceeEEEEcCCccccc
Confidence 9999999999988753
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-46 Score=316.20 Aligned_cols=248 Identities=31% Similarity=0.429 Sum_probs=222.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|+++.++++++++++.+++
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999999888888887766788889999999999999999999998
Q ss_pred CCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhHHH
Q 024125 93 NGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGAT 170 (272)
Q Consensus 93 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~~s 170 (272)
+++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+. .+.++...|++|
T Consensus 82 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s 160 (254)
T PRK07478 82 -GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAAS 160 (254)
T ss_pred -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHH
Confidence 68999999999753 467778899999999999999999999999999998888999999998876 567888999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|++.++++++.|+.++||+|++|+||+++|++.......++.........|.+++.+|+|+++.+++|+++...+++|
T Consensus 161 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 240 (254)
T PRK07478 161 KAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTG 240 (254)
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCC
Confidence 99999999999999999999999999999999987655333343344445567888999999999999999988999999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
+.+.+|||+++
T Consensus 241 ~~~~~dgg~~~ 251 (254)
T PRK07478 241 TALLVDGGVSI 251 (254)
T ss_pred CeEEeCCchhc
Confidence 99999999764
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-46 Score=301.97 Aligned_cols=227 Identities=27% Similarity=0.372 Sum_probs=204.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++||||||||||.++|+.|++.|++|++++|+.+++++++.++.+ ..+.....|++|.++++.+++.+.++|
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~- 79 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF- 79 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh-
Confidence 46789999999999999999999999999999999999999999998865 578889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|+||||||.....++.+.+.++|++++++|+.|.++.+++++|.|.+++.|.|||+||+++..++++...|+++|++
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~a 159 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAA 159 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHH
Confidence 79999999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
+..|++.|++|+..++|||..|+||.+.|+.++......+ .++...........+|+|+|+.+.|.++..
T Consensus 160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~-~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P 229 (246)
T COG4221 160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGD-DERADKVYKGGTALTPEDIAEAVLFAATQP 229 (246)
T ss_pred HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCch-hhhHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998877665543321 111112223455679999999999999744
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-46 Score=312.69 Aligned_cols=248 Identities=27% Similarity=0.465 Sum_probs=226.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+++.+..+++...+.++..+.+|++|.++++++++++.+.+
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 46889999999999999999999999999999999999988888888887666678888999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++++++++|.+++.++||++||..+..+.++...|+++|+
T Consensus 85 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 163 (254)
T PRK08085 85 -GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKG 163 (254)
T ss_pred -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHH
Confidence 6899999999987777888899999999999999999999999999998877799999999988888888999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
++++++++++.++.++||+||+|+||+++|++.......++.........|.+++.+|+|+++++.||+++.+.+++|++
T Consensus 164 a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~ 243 (254)
T PRK08085 164 AVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHL 243 (254)
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCE
Confidence 99999999999999999999999999999999766544344445566678999999999999999999999999999999
Q ss_pred EEeCCCcCC
Q 024125 253 ISVDGGFTA 261 (272)
Q Consensus 253 i~~dgG~~~ 261 (272)
+.+|||+..
T Consensus 244 i~~dgg~~~ 252 (254)
T PRK08085 244 LFVDGGMLV 252 (254)
T ss_pred EEECCCeee
Confidence 999999764
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-46 Score=315.28 Aligned_cols=244 Identities=23% Similarity=0.283 Sum_probs=209.6
Q ss_pred CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCCh---HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 13 ~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
+++++|+++||||+ +|||++++++|+++|++|++++|+. +.++++.+++. +.++..+++|++|.+++++++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence 45789999999998 8999999999999999999998753 33444444332 45678889999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC
Q 024125 88 VGSKFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~ 163 (272)
+.+++ +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|++ .|+||++||..+..+.+.
T Consensus 81 ~~~~~-g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~ 157 (257)
T PRK08594 81 IKEEV-GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQN 157 (257)
T ss_pred HHHhC-CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCC
Confidence 99998 79999999999753 356678899999999999999999999999999965 389999999999888888
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
..+|++||+|+++|+++++.|++++||+||+|+||+++|++........+.........|.+++.+|+|+++.+.||+++
T Consensus 158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~ 237 (257)
T PRK08594 158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSD 237 (257)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCc
Confidence 89999999999999999999999999999999999999998654321122223344556888999999999999999999
Q ss_pred CCCCccccEEEeCCCcCC
Q 024125 244 AASYITGQIISVDGGFTA 261 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~ 261 (272)
.+.+++|+++.+|||+++
T Consensus 238 ~~~~~tG~~~~~dgg~~~ 255 (257)
T PRK08594 238 LSRGVTGENIHVDSGYHI 255 (257)
T ss_pred ccccccceEEEECCchhc
Confidence 999999999999999764
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-46 Score=313.27 Aligned_cols=249 Identities=30% Similarity=0.420 Sum_probs=218.8
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
..+++++|++||||+++|||++++++|+++|++|++++|+.+ .+++..+++...+.++..+.+|++|+++++++++++.
T Consensus 2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 81 (254)
T PRK06114 2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE 81 (254)
T ss_pred CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999998754 4566667776666678888999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC--Chhh
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIY 167 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~--~~~Y 167 (272)
+.+ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+.+. ...|
T Consensus 82 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y 160 (254)
T PRK06114 82 AEL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHY 160 (254)
T ss_pred HHc-CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchH
Confidence 988 6899999999987777788889999999999999999999999999998887799999999988765443 6889
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+++|+|+++++++++.|+.++||+||+|+||+++|++.... ...+.........|+++..+|+|+++.+.||+++.+.+
T Consensus 161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~ 239 (254)
T PRK06114 161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASF 239 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence 99999999999999999999999999999999999986431 11222344556778999999999999999999999999
Q ss_pred ccccEEEeCCCcCC
Q 024125 248 ITGQIISVDGGFTA 261 (272)
Q Consensus 248 ~~G~~i~~dgG~~~ 261 (272)
+||++|.+|||+++
T Consensus 240 ~tG~~i~~dgg~~~ 253 (254)
T PRK06114 240 CTGVDLLVDGGFVC 253 (254)
T ss_pred cCCceEEECcCEec
Confidence 99999999999764
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=314.78 Aligned_cols=253 Identities=34% Similarity=0.519 Sum_probs=221.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++|||||++|||++++++|+++|++|++++|+ +++++..+++.+.+.++..+.+|+++.++++++++++.+.+
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 80 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF- 80 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-
Confidence 3679999999999999999999999999999999999 77777887877666678899999999999999999999998
Q ss_pred CCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|++++ |+||++||..+..+.++...|++||+
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa 159 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKG 159 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHH
Confidence 68999999999854 35677889999999999999999999999999998765 89999999999888888999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH------HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE------FVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|+++|++++++|+.++||+||+|+||+++|++........+ .........|.+++.+|+|+++.+.+|+++...
T Consensus 160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 239 (272)
T PRK08589 160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSS 239 (272)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 99999999999999999999999999999999765432111 111122346788899999999999999999899
Q ss_pred CccccEEEeCCCcCCCCCCCCCCC
Q 024125 247 YITGQIISVDGGFTANGFNPGIRL 270 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~~~~~~~~~ 270 (272)
+++|+++.+|||+.. +.|+|+-+
T Consensus 240 ~~~G~~i~vdgg~~~-~~~~~~~~ 262 (272)
T PRK08589 240 FITGETIRIDGGVMA-YTWPGEML 262 (272)
T ss_pred CcCCCEEEECCCccc-CCCCCccc
Confidence 999999999999764 46666543
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-46 Score=319.02 Aligned_cols=254 Identities=25% Similarity=0.296 Sum_probs=213.8
Q ss_pred CCCCCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC----------C---CeEEEEEecC
Q 024125 11 SRWSLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK----------G---FVVSGSVCDA 75 (272)
Q Consensus 11 ~~~~l~~k~vlItGa--~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~---~~~~~~~~D~ 75 (272)
.+++|+||++||||| ++|||+++|+.|+++|++|++ +|+.+++++....+.+. + .....+.+|+
T Consensus 3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 81 (303)
T PLN02730 3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA 81 (303)
T ss_pred CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence 346799999999999 899999999999999999998 78888888777665421 1 1135677888
Q ss_pred --CC------------------HHHHHHHHHHHHHHcCCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHH
Q 024125 76 --AS------------------PDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHL 133 (272)
Q Consensus 76 --~~------------------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l 133 (272)
++ .++++++++++.+.+ +++|++|||||... ..++.+.+.++|++++++|+.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l 160 (303)
T PLN02730 82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL 160 (303)
T ss_pred ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 33 448999999999998 79999999998532 46888999999999999999999999
Q ss_pred HHHHHHHHHcCCCCeEEEecCCCCCCCCCCC-hhhHHHHHHHHHHHHHHHHHHcc-CCeeEEEeeCCcccChhhHhhhhC
Q 024125 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVERLLEN 211 (272)
Q Consensus 134 ~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~PG~v~t~~~~~~~~~ 211 (272)
+++++|+|+++ |+|||+||..+..+.++. ..|++||+|+++|+++|+.|+++ +|||||+|+||+++|+|.......
T Consensus 161 ~~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~ 238 (303)
T PLN02730 161 LQHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFI 238 (303)
T ss_pred HHHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccccc
Confidence 99999999764 899999999988877765 58999999999999999999986 799999999999999997653212
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCCCCCCCC
Q 024125 212 KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANGFNPGI 268 (272)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~~~~~~ 268 (272)
.+.........|++++.+|+|+++.+.||+++...+++|+++.+|||+.+.|+++-+
T Consensus 239 ~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~~~~ 295 (303)
T PLN02730 239 DDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGLALDS 295 (303)
T ss_pred HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccccCCCc
Confidence 222233334557788999999999999999999999999999999999998877643
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=312.51 Aligned_cols=249 Identities=30% Similarity=0.450 Sum_probs=220.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++..+.+|++|.++++++++++.+
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999998888887777654 34788899999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.+....|+++
T Consensus 84 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~as 162 (265)
T PRK07062 84 RF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAA 162 (265)
T ss_pred hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHH
Confidence 98 68999999999877778888999999999999999999999999999998877999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC--------HHHHHHH--HhcCCCCCCCCHHHHHHHHHHH
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN--------KEFVDKV--IARTPLQRVGEPEEVASLVAYL 240 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~--~~~~~~~~~~~~~e~a~~~~~l 240 (272)
|+|+++|+++++.|+.++||+||+|+||+++|++....... .++...+ ....|.+++.+|+|+++++.||
T Consensus 163 Kaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L 242 (265)
T PRK07062 163 RAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFL 242 (265)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999986542210 1111111 2456888999999999999999
Q ss_pred hcCCCCCccccEEEeCCCcCCC
Q 024125 241 CLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 241 ~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+++...++||+++.+|||+..|
T Consensus 243 ~s~~~~~~tG~~i~vdgg~~~~ 264 (265)
T PRK07062 243 ASPLSSYTTGSHIDVSGGFARH 264 (265)
T ss_pred hCchhcccccceEEEcCceEee
Confidence 9998999999999999997654
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=315.24 Aligned_cols=246 Identities=21% Similarity=0.289 Sum_probs=206.7
Q ss_pred CCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++|||||+ +|||+++|+.|+++|++|++++|+.. ..+..+++.+....+..+++|++|+++++++++++.+++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 578999999997 89999999999999999999988742 222233332221235568999999999999999999998
Q ss_pred CCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 93 NGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 93 ~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+++|++|||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++ .|+||++||..+..+.+++..|+
T Consensus 87 -g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~ 163 (272)
T PRK08159 87 -GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMG 163 (272)
T ss_pred -CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhh
Confidence 69999999999754 256778899999999999999999999999999964 38999999998888888899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+|+.+|+++++.|+.++||+||+|+||+++|++..................|.+++.+|+|+++.++||+++...++
T Consensus 164 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~i 243 (272)
T PRK08159 164 VAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGV 243 (272)
T ss_pred hHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCc
Confidence 99999999999999999999999999999999998865332111111222335788899999999999999999999999
Q ss_pred cccEEEeCCCcCCCCC
Q 024125 249 TGQIISVDGGFTANGF 264 (272)
Q Consensus 249 ~G~~i~~dgG~~~~~~ 264 (272)
||++|.+|||+++.++
T Consensus 244 tG~~i~vdgG~~~~~~ 259 (272)
T PRK08159 244 TGEVHHVDSGYHVVGM 259 (272)
T ss_pred cceEEEECCCceeecc
Confidence 9999999999877655
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-46 Score=312.75 Aligned_cols=254 Identities=46% Similarity=0.571 Sum_probs=220.4
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
+++.+.||+++|||+++|||+++|++|++.|++|++++|+++++++..+++...+ .++..+.||+++.+++++++++
T Consensus 2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~ 81 (270)
T KOG0725|consen 2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF 81 (270)
T ss_pred CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence 3567999999999999999999999999999999999999999999988877653 4699999999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCC-CCCCCCHHHHHHHHHHHhH-HHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC-
Q 024125 88 VGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFE-STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG- 164 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~N~~-~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~- 164 (272)
..+++.+++|++|||||..... ++.+.+.++|++++++|+. +.+.+.+.+.|++++++.|.|+++||..+..+..+.
T Consensus 82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~ 161 (270)
T KOG0725|consen 82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG 161 (270)
T ss_pred HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence 9999447999999999986555 7899999999999999999 577777888888888788999999999988776555
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---HHHHHH--HHhcCCCCCCCCHHHHHHHHHH
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---KEFVDK--VIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
..|+++|+|+++|+|++|.||.++|||||+|+||.+.|++....... .+..+. .....|.++.+.|+|++..+.|
T Consensus 162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~f 241 (270)
T KOG0725|consen 162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAF 241 (270)
T ss_pred ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHh
Confidence 79999999999999999999999999999999999999982211111 122222 2345689999999999999999
Q ss_pred HhcCCCCCccccEEEeCCCcCCCCC
Q 024125 240 LCLPAASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~~~~~ 264 (272)
|++++..|++|+.+.+|||+++.+.
T Consensus 242 la~~~asyitG~~i~vdgG~~~~~~ 266 (270)
T KOG0725|consen 242 LASDDASYITGQTIIVDGGFTVVGP 266 (270)
T ss_pred hcCcccccccCCEEEEeCCEEeecc
Confidence 9998877999999999999988653
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=311.95 Aligned_cols=254 Identities=33% Similarity=0.528 Sum_probs=225.4
Q ss_pred cccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHH
Q 024125 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 7 ~~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
.+..+.+++++|++|||||++|||++++++|+++|++|++++|+ +..+++.+.+...+.++.++++|+++.++++++++
T Consensus 5 ~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 83 (258)
T PRK06935 5 KFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVK 83 (258)
T ss_pred hhccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 34455567899999999999999999999999999999999998 55566666666556678889999999999999999
Q ss_pred HHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...
T Consensus 84 ~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 162 (258)
T PRK06935 84 EALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPA 162 (258)
T ss_pred HHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchh
Confidence 999998 6899999999987777888889999999999999999999999999999887899999999998888888999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|+++|++++++++++++|+.++||+||+|+||+++|++.......+..........|.+++.+|+|+++++.||+++.+.
T Consensus 163 Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~ 242 (258)
T PRK06935 163 YTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASD 242 (258)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhc
Confidence 99999999999999999999999999999999999998755433333344455667889999999999999999999999
Q ss_pred CccccEEEeCCCcCCC
Q 024125 247 YITGQIISVDGGFTAN 262 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~ 262 (272)
+++|+++.+|||..++
T Consensus 243 ~~~G~~i~~dgg~~~~ 258 (258)
T PRK06935 243 YVNGHILAVDGGWLVR 258 (258)
T ss_pred CCCCCEEEECCCeecC
Confidence 9999999999997653
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=310.36 Aligned_cols=248 Identities=30% Similarity=0.452 Sum_probs=218.5
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+.++++||++||||+++|||++++++|+++|++|++++++.. ++..+++...+.++..+++|++|.++++++++++.+
T Consensus 4 ~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 4 DAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999998877542 344455555556788899999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
++ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.+....|++
T Consensus 82 ~~-~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 160 (253)
T PRK08993 82 EF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA 160 (253)
T ss_pred Hh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHH
Confidence 88 6899999999987777788899999999999999999999999999997764 589999999998888888899999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
+|+|+++++++++.|+.++||+||+|+||+++|++...+..............|.+++.+|+|+++.+.||+++...+++
T Consensus 161 sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~ 240 (253)
T PRK08993 161 SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYIN 240 (253)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence 99999999999999999999999999999999999765543333334455677889999999999999999999999999
Q ss_pred ccEEEeCCCcCC
Q 024125 250 GQIISVDGGFTA 261 (272)
Q Consensus 250 G~~i~~dgG~~~ 261 (272)
|+++.+|||+..
T Consensus 241 G~~~~~dgg~~~ 252 (253)
T PRK08993 241 GYTIAVDGGWLA 252 (253)
T ss_pred CcEEEECCCEec
Confidence 999999999764
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-45 Score=312.29 Aligned_cols=248 Identities=28% Similarity=0.403 Sum_probs=218.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.++++|++|||||++|||+++++.|+++|++|++++| +.+.++...+++... +.++.++++|++|+++++++++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999988864 566667766666543 56788999999999999999999999
Q ss_pred HcCCCccEEEECCCCCC------CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC
Q 024125 91 KFNGKLNILVNNVGTNI------RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~ 164 (272)
.+ +++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|.|++++.|+||++||..+..+.+..
T Consensus 84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 162 (260)
T PRK08416 84 DF-DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY 162 (260)
T ss_pred hc-CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc
Confidence 88 68999999998642 346667888999999999999999999999999988777899999999988888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
..|++||+|++.|+++++.|+.++||+|++|+||+++|++...+....+..+......|.+++.+|+|++++++||+++.
T Consensus 163 ~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~ 242 (260)
T PRK08416 163 AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEK 242 (260)
T ss_pred ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence 99999999999999999999999999999999999999997655433344444556678899999999999999999988
Q ss_pred CCCccccEEEeCCCcCC
Q 024125 245 ASYITGQIISVDGGFTA 261 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~ 261 (272)
..+++|+.+.+|||+++
T Consensus 243 ~~~~~G~~i~vdgg~~~ 259 (260)
T PRK08416 243 ASWLTGQTIVVDGGTTF 259 (260)
T ss_pred hhcccCcEEEEcCCeec
Confidence 99999999999999875
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=312.47 Aligned_cols=244 Identities=20% Similarity=0.292 Sum_probs=207.1
Q ss_pred CCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++||++|||||++ |||+++++.|+++|++|++++|+ ++.++..+++......+..+.+|++|+++++++++++.+++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 6799999999986 99999999999999999999987 34444555554443446678999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCC-----CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 93 NGKLNILVNNVGTNIRKP-----TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++|++|||||+....+ +.+.+.++|++++++|+.+++.+++.+.|.|++ .|+||++||..+..+.+.+..|
T Consensus 83 -g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y 159 (262)
T PRK07984 83 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM 159 (262)
T ss_pred -CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchh
Confidence 68999999999754322 456788999999999999999999999987643 3899999999988888889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+++|+++++.|+.++||+||+|+||+++|++..................|.+++.+|+|+++++.||+++...+
T Consensus 160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~ 239 (262)
T PRK07984 160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG 239 (262)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCccccc
Confidence 99999999999999999999999999999999999875433221222333445678899999999999999999999999
Q ss_pred ccccEEEeCCCcCCC
Q 024125 248 ITGQIISVDGGFTAN 262 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~ 262 (272)
++|+++.+|||+.+-
T Consensus 240 itG~~i~vdgg~~~~ 254 (262)
T PRK07984 240 ISGEVVHVDGGFSIA 254 (262)
T ss_pred ccCcEEEECCCcccc
Confidence 999999999997654
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-45 Score=307.88 Aligned_cols=251 Identities=33% Similarity=0.515 Sum_probs=229.2
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
..+++++|++|||||+++||++++++|+++|++|++++|++++.++..+++...+.++..+.+|++|.++++++++++.+
T Consensus 4 ~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 4 NLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA 83 (255)
T ss_pred cccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44568999999999999999999999999999999999999888888887776666788899999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.+ +++|++|||||.....++.+.+.++|++++++|+.+++++++++.++|.+++.++||++||..+..+.++...|+++
T Consensus 84 ~~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 162 (255)
T PRK07523 84 EI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTAT 162 (255)
T ss_pred hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHH
Confidence 88 68999999999987788888999999999999999999999999999988877999999999988888899999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|++++.++++++.+++++||+|++++||+++|++.......+....++....|.+++.+|+|+++++.+|+++...+++|
T Consensus 163 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G 242 (255)
T PRK07523 163 KGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNG 242 (255)
T ss_pred HHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccC
Confidence 99999999999999999999999999999999997765444455556667788899999999999999999998999999
Q ss_pred cEEEeCCCcCCC
Q 024125 251 QIISVDGGFTAN 262 (272)
Q Consensus 251 ~~i~~dgG~~~~ 262 (272)
+++.+|||...+
T Consensus 243 ~~i~~~gg~~~~ 254 (255)
T PRK07523 243 HVLYVDGGITAS 254 (255)
T ss_pred cEEEECCCeecc
Confidence 999999997654
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-45 Score=311.45 Aligned_cols=243 Identities=26% Similarity=0.286 Sum_probs=201.2
Q ss_pred CCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa--~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++||||| ++|||++++++|+++|++|++++|.... ++..+++.+.......+++|++|+++++++++++.+++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW 82 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence 67999999996 6899999999999999999998764221 22222222221123467899999999999999999998
Q ss_pred CCCccEEEECCCCCCCC----C-CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 93 NGKLNILVNNVGTNIRK----P-TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++|++|||||..... + +.+.+.++|++.+++|+.+++.++++++|+|++ .|+||++||..+..+.+...+|
T Consensus 83 -g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~~Y 159 (260)
T PRK06997 83 -DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYNTM 159 (260)
T ss_pred -CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcchH
Confidence 7999999999975432 2 346788999999999999999999999999943 3899999999988888888999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+++|+++++.|++++||+||+|+||+++|++.......++.........|.++..+|+|+++.+.||+++.+.+
T Consensus 160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~ 239 (260)
T PRK06997 160 GLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASG 239 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccC
Confidence 99999999999999999999999999999999999876543211222233344568899999999999999999999999
Q ss_pred ccccEEEeCCCcCC
Q 024125 248 ITGQIISVDGGFTA 261 (272)
Q Consensus 248 ~~G~~i~~dgG~~~ 261 (272)
+||+.|.+|||+++
T Consensus 240 itG~~i~vdgg~~~ 253 (260)
T PRK06997 240 VTGEITHVDSGFNA 253 (260)
T ss_pred cceeEEEEcCChhh
Confidence 99999999999654
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=304.29 Aligned_cols=248 Identities=33% Similarity=0.470 Sum_probs=224.3
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.+.+.++..+++|+++.++++++++++.+.
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999998888888888766667888999999999999999999999
Q ss_pred cCCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||.. ...++.+.+.+++++.+++|+.+++.++++++|+|++++.++|+++||..+..+.++...|++|
T Consensus 83 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 161 (252)
T PRK07035 83 H-GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSIT 161 (252)
T ss_pred c-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHH
Confidence 8 6899999999964 3456677899999999999999999999999999988878999999999988888899999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+++++|+++++.|+.++||+|++++||+++|++...........+......|.++..+|+|+++.+.+|+++...+++|
T Consensus 162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g 241 (252)
T PRK07035 162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTG 241 (252)
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccC
Confidence 99999999999999999999999999999999997665544444455556678889999999999999999999999999
Q ss_pred cEEEeCCCcC
Q 024125 251 QIISVDGGFT 260 (272)
Q Consensus 251 ~~i~~dgG~~ 260 (272)
+++.+|||++
T Consensus 242 ~~~~~dgg~~ 251 (252)
T PRK07035 242 ECLNVDGGYL 251 (252)
T ss_pred CEEEeCCCcC
Confidence 9999999975
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=309.21 Aligned_cols=233 Identities=42% Similarity=0.622 Sum_probs=212.8
Q ss_pred CCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEE
Q 024125 24 GGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILV 100 (272)
Q Consensus 24 Ga~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li 100 (272)
|++ +|||+++|++|+++|++|++++|+.+++++..+++.+. +.+ ++++|++++++++++++++.+.+++++|++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 566 99999999999999999999999999876666666543 444 4899999999999999999999856999999
Q ss_pred ECCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 101 NNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 101 ~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
||++.... .++.+.+.++|++.+++|+.+++.++++++|+|+++ |+||++||..+..+.++...|+++|+|+++
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~ 156 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEG 156 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHH
Confidence 99998665 677888999999999999999999999999999876 799999999999999999999999999999
Q ss_pred HHHHHHHHHcc-CCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEe
Q 024125 177 LTRNLACEWAK-DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255 (272)
Q Consensus 177 ~~~~la~el~~-~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~ 255 (272)
|+|++|.||++ +|||||+|+||+++|++.......++..+......|++++.+|+|+|+++.||+++.+.++|||+|.+
T Consensus 157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~v 236 (241)
T PF13561_consen 157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPV 236 (241)
T ss_dssp HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEE
T ss_pred HHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEE
Confidence 99999999999 99999999999999999876655566778888899999999999999999999999999999999999
Q ss_pred CCCcC
Q 024125 256 DGGFT 260 (272)
Q Consensus 256 dgG~~ 260 (272)
|||++
T Consensus 237 DGG~s 241 (241)
T PF13561_consen 237 DGGFS 241 (241)
T ss_dssp STTGG
T ss_pred CCCcC
Confidence 99985
|
... |
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=308.05 Aligned_cols=249 Identities=32% Similarity=0.450 Sum_probs=221.6
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++...+.++..+++|+++.+++..+++++.++
T Consensus 5 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 5 LFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred eeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999988888888887766668889999999999999999999998
Q ss_pred cCCCccEEEECCCCCCC---------------CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 92 FNGKLNILVNNVGTNIR---------------KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~---------------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
+ +++|++|||||...+ .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..
T Consensus 85 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 163 (278)
T PRK08277 85 F-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMN 163 (278)
T ss_pred c-CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccch
Confidence 8 699999999996432 245678899999999999999999999999999888789999999999
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-----HHHHHHHHhcCCCCCCCCHH
Q 024125 157 GLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-----KEFVDKVIARTPLQRVGEPE 231 (272)
Q Consensus 157 ~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 231 (272)
+..+.++...|++||+|+++|+++++.++.++||+||+|+||+++|++...+... .+.........|.+++.+|+
T Consensus 164 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 243 (278)
T PRK08277 164 AFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPE 243 (278)
T ss_pred hcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHH
Confidence 9999999999999999999999999999999999999999999999986554321 12334445567899999999
Q ss_pred HHHHHHHHHhcC-CCCCccccEEEeCCCcCC
Q 024125 232 EVASLVAYLCLP-AASYITGQIISVDGGFTA 261 (272)
Q Consensus 232 e~a~~~~~l~~~-~~~~~~G~~i~~dgG~~~ 261 (272)
|+++++.||+++ .+.++||++|.+|||++.
T Consensus 244 dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~ 274 (278)
T PRK08277 244 ELLGTLLWLADEKASSFVTGVVLPVDGGFSA 274 (278)
T ss_pred HHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence 999999999998 899999999999999653
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=304.92 Aligned_cols=249 Identities=34% Similarity=0.452 Sum_probs=217.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++++|+++.++++++++++.+.+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 78 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF- 78 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 478999999999999999999999999999999999988777766554 3468889999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||......+ +.+.++|++.+++|+.+++.++++++|+|+ ++.|+||++||..+..+.++...|+++|++
T Consensus 79 g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa 156 (261)
T PRK08265 79 GRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAA 156 (261)
T ss_pred CCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence 689999999997544433 568899999999999999999999999997 556899999999999888899999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-HHHHHHHH-hcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-KEFVDKVI-ARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+++++++++.|+.++||+||+|+||+++|++....... ........ ...|.+++.+|+|+++++.||+++...+++|+
T Consensus 157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~ 236 (261)
T PRK08265 157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGA 236 (261)
T ss_pred HHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCc
Confidence 99999999999999999999999999999997654322 12222222 24578899999999999999999989999999
Q ss_pred EEEeCCCcCCCCCCCCC
Q 024125 252 IISVDGGFTANGFNPGI 268 (272)
Q Consensus 252 ~i~~dgG~~~~~~~~~~ 268 (272)
.|.+|||+++.+..+++
T Consensus 237 ~i~vdgg~~~~~~~~~~ 253 (261)
T PRK08265 237 DYAVDGGYSALGPEQGV 253 (261)
T ss_pred EEEECCCeeccCCCCCC
Confidence 99999999988877765
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-44 Score=303.22 Aligned_cols=248 Identities=35% Similarity=0.483 Sum_probs=224.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||+||||++++++|+++|++|++++|+.+..++..+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999988888888887767788899999999999999999999988
Q ss_pred CCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||.... .++.+.+.+++++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|+++|
T Consensus 83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK 161 (253)
T PRK06172 83 -GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK 161 (253)
T ss_pred -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence 689999999997543 457788999999999999999999999999999887778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
+++++|+++++.++.++||+|++++||+++|++...... .++....+....|.+++.+|+|+++.+.+|+++...+++|
T Consensus 162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G 241 (253)
T PRK06172 162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTG 241 (253)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCC
Confidence 999999999999999999999999999999999876543 3444455566778889999999999999999998999999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
++|.+|||+++
T Consensus 242 ~~i~~dgg~~~ 252 (253)
T PRK06172 242 HALMVDGGATA 252 (253)
T ss_pred cEEEECCCccC
Confidence 99999999864
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=303.57 Aligned_cols=245 Identities=29% Similarity=0.390 Sum_probs=211.9
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH--
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK-- 91 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-- 91 (272)
+++|++|||||++|||++++++|+++|++|++++ |+.+..++...++...+.++..+.+|+++.++++.+++++.+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4689999999999999999999999999998874 6677777777777766667788899999999999999888753
Q ss_pred --cC-CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 92 --FN-GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 92 --~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
++ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|++. |+||++||..+..+.++...|+
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~ 159 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRISLPDFIAYS 159 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccCCCCchhHH
Confidence 32 379999999998766778888999999999999999999999999999754 7999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+|+++++++++.|+.++||+||+|+||+++|++.......+..........+.+++.+|+|+++++.||+++...++
T Consensus 160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~ 239 (252)
T PRK12747 160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWV 239 (252)
T ss_pred HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCc
Confidence 99999999999999999999999999999999999976544333322222223467889999999999999999989999
Q ss_pred cccEEEeCCCcCC
Q 024125 249 TGQIISVDGGFTA 261 (272)
Q Consensus 249 ~G~~i~~dgG~~~ 261 (272)
+|+.+.+|||+.+
T Consensus 240 ~G~~i~vdgg~~~ 252 (252)
T PRK12747 240 TGQLIDVSGGSCL 252 (252)
T ss_pred CCcEEEecCCccC
Confidence 9999999999764
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=305.14 Aligned_cols=243 Identities=23% Similarity=0.201 Sum_probs=203.8
Q ss_pred CCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCCh--HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 14 ~l~~k~vlItGa--~~giG~~ia~~l~~~G~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+++|+++|||+ ++|||++++++|+++|++|++++|+. +..+++.+++ +.++..+++|++|+++++++++++.
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 378999999999 89999999999999999999998764 3344444433 2356678999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh
Q 024125 90 SKFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~ 165 (272)
+++ +++|++|||||+... .++.+.+.++|++++++|+.+++.+++.++|+|++ .|+||++++.. ..+.+.+.
T Consensus 81 ~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~ 156 (256)
T PRK07889 81 EHV-DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYD 156 (256)
T ss_pred HHc-CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccc
Confidence 988 799999999998543 35667889999999999999999999999999974 37999998653 34556778
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCC-CCCCHHHHHHHHHHHhcCC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ-RVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~a~~~~~l~~~~ 244 (272)
.|++||+|+.+|+++++.|++++||+||+|+||+++|++...+....+.........|.+ ++.+|+|+|+.++||+++.
T Consensus 157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~ 236 (256)
T PRK07889 157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDW 236 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcc
Confidence 899999999999999999999999999999999999998765432222223334456777 5889999999999999998
Q ss_pred CCCccccEEEeCCCcCCCC
Q 024125 245 ASYITGQIISVDGGFTANG 263 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~~ 263 (272)
..+++|+++.+|||++..|
T Consensus 237 ~~~~tG~~i~vdgg~~~~~ 255 (256)
T PRK07889 237 FPATTGEIVHVDGGAHAMG 255 (256)
T ss_pred cccccceEEEEcCceeccC
Confidence 9999999999999987654
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-44 Score=302.71 Aligned_cols=242 Identities=29% Similarity=0.350 Sum_probs=212.3
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ ++.++++|++|.++++++++++.+++ +++|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELL-GGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 479999999999999999999999999999999988888888776543 67788999999999999999999988 6899
Q ss_pred EEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 98 ILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 98 ~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|||||... +.++.+.+.++|.+.+++|+.+++.+++.++|.|.+ ++.|+||++||..+..+.++...|+++|+|+
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~ 158 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGL 158 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHH
Confidence 9999999743 345677888999999999999999999999998864 4568999999999988888899999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHH-HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKE-FVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
++|+++++.++.++||+||+|+||+++|++...... .++ +........|.+++.+|+|+++++.||+++.
T Consensus 159 ~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~ 238 (259)
T PRK08340 159 VQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSEN 238 (259)
T ss_pred HHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcc
Confidence 999999999999999999999999999998753211 111 2233455678899999999999999999999
Q ss_pred CCCccccEEEeCCCcCC
Q 024125 245 ASYITGQIISVDGGFTA 261 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~ 261 (272)
+.++||+++.+|||+..
T Consensus 239 ~~~itG~~i~vdgg~~~ 255 (259)
T PRK08340 239 AEYMLGSTIVFDGAMTR 255 (259)
T ss_pred cccccCceEeecCCcCC
Confidence 99999999999999764
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=301.00 Aligned_cols=245 Identities=29% Similarity=0.458 Sum_probs=215.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.. .+..+.+...+.++..+.+|+++.++++++++++.+.+
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF- 78 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 588999999999999999999999999999999998752 34444555555678889999999999999999998888
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..+..+.+....|+++|+
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa 158 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKH 158 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence 6899999999987777788889999999999999999999999999997765 689999999988888888899999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
+++++++++++++.++||+|++++||+++|++..................|.+++.+|+|+|+++.+|+++...+++|++
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~ 238 (248)
T TIGR01832 159 GVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYT 238 (248)
T ss_pred HHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcE
Confidence 99999999999999999999999999999998765433333333445567888999999999999999998899999999
Q ss_pred EEeCCCcCC
Q 024125 253 ISVDGGFTA 261 (272)
Q Consensus 253 i~~dgG~~~ 261 (272)
+.+|||+.+
T Consensus 239 i~~dgg~~~ 247 (248)
T TIGR01832 239 LAVDGGWLA 247 (248)
T ss_pred EEeCCCEec
Confidence 999999764
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-44 Score=308.36 Aligned_cols=246 Identities=29% Similarity=0.331 Sum_probs=214.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC--hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN--EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++++|++|||||++|||++++++|+++|++|++++|+ .+..+++.+.+...+.++.++.+|+++.++++++++++.+.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999998765 34455555555555667888999999999999999999998
Q ss_pred cCCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++. ++||++||..+..+.+...+|+++
T Consensus 126 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g~iv~iSS~~~~~~~~~~~~Y~as 202 (294)
T PRK07985 126 L-GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAAT 202 (294)
T ss_pred h-CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC--CEEEEECCchhccCCCCcchhHHH
Confidence 8 6899999999974 34567788999999999999999999999999999653 799999999998888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+++++++++.|++++||+||+|+||+++|++........+....+....|.++..+|+|+++++.||+++.+.+++|
T Consensus 203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG 282 (294)
T PRK07985 203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTA 282 (294)
T ss_pred HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccc
Confidence 99999999999999999999999999999999986432222333445566778899999999999999999999999999
Q ss_pred cEEEeCCCcCCC
Q 024125 251 QIISVDGGFTAN 262 (272)
Q Consensus 251 ~~i~~dgG~~~~ 262 (272)
+.+.+|||++++
T Consensus 283 ~~i~vdgG~~~~ 294 (294)
T PRK07985 283 EVHGVCGGEHLG 294 (294)
T ss_pred cEEeeCCCeeCc
Confidence 999999998763
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-44 Score=306.98 Aligned_cols=240 Identities=25% Similarity=0.339 Sum_probs=211.2
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh---------HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---------VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 85 (272)
+++|++|||||++|||++++++|+++|++|++++|+. +.+++..+++...+.++..+.+|++|.+++++++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 6799999999999999999999999999999998876 6677777777766777888999999999999999
Q ss_pred HHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC------CCeEEEecCCCCCC
Q 024125 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG------VGSIVFISSVGGLS 159 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~g~ii~vsS~~~~~ 159 (272)
+++.+.+ +++|++|||||+....++.+.+.++|++++++|+.+++.++++++|+|+++. .|+||++||..+..
T Consensus 84 ~~~~~~~-g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 84 DAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 9999998 6899999999987777888899999999999999999999999999997542 37999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCC--CCCCHHHHHHHH
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ--RVGEPEEVASLV 237 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~e~a~~~ 237 (272)
+.++...|++||+|+++|+++++.|++++||+||+|+|| ++|+|..... .......+.+ +..+|+|+++++
T Consensus 163 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~------~~~~~~~~~~~~~~~~pedva~~~ 235 (286)
T PRK07791 163 GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF------AEMMAKPEEGEFDAMAPENVSPLV 235 (286)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH------HHHHhcCcccccCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999 8998864321 1111222333 356999999999
Q ss_pred HHHhcCCCCCccccEEEeCCCcCCC
Q 024125 238 AYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+||+++...+++|++|.+|||+...
T Consensus 236 ~~L~s~~~~~itG~~i~vdgG~~~~ 260 (286)
T PRK07791 236 VWLGSAESRDVTGKVFEVEGGKISV 260 (286)
T ss_pred HHHhCchhcCCCCcEEEEcCCceEE
Confidence 9999998999999999999997665
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=298.78 Aligned_cols=223 Identities=29% Similarity=0.376 Sum_probs=204.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
...++++||||||+|||+++|++|+++|++|++++|++++++++.+++++. +..+.++++|++++++++++.+++.+..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999999999999999999865 6789999999999999999999999886
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
..+|++|||||....+++.+.++++.++++++|+.+.+.++++++|.|.+++.|.||||+|.+++.+.|..+.|++||+
T Consensus 83 -~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa 161 (265)
T COG0300 83 -GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKA 161 (265)
T ss_pred -CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
++.+|+++|+.||.++||+|.+++||++.|++.... .. ......+...+.+|+++|+..+..+..
T Consensus 162 ~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~-~~-----~~~~~~~~~~~~~~~~va~~~~~~l~~ 226 (265)
T COG0300 162 FVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK-GS-----DVYLLSPGELVLSPEDVAEAALKALEK 226 (265)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc-cc-----ccccccchhhccCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999998511 11 111223456678999999999988864
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-44 Score=300.92 Aligned_cols=251 Identities=49% Similarity=0.798 Sum_probs=228.0
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++++++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++... +.++..+.+|+++.++++++++++.
T Consensus 4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (257)
T PRK09242 4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE 83 (257)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999888888777654 5678889999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+.+ +++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++
T Consensus 84 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~ 162 (257)
T PRK09242 84 DHW-DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGM 162 (257)
T ss_pred HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHH
Confidence 998 6899999999987667778889999999999999999999999999998887799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
+|++++.++++++.++.++||+|++++||+++|++.......++.........|.++..+|+|++.++.||+++...+++
T Consensus 163 sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 242 (257)
T PRK09242 163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYIT 242 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccccc
Confidence 99999999999999999999999999999999999876655555555566677888999999999999999998888999
Q ss_pred ccEEEeCCCcCCCC
Q 024125 250 GQIISVDGGFTANG 263 (272)
Q Consensus 250 G~~i~~dgG~~~~~ 263 (272)
|+.+.+|||.+.-|
T Consensus 243 g~~i~~~gg~~~~~ 256 (257)
T PRK09242 243 GQCIAVDGGFLRYG 256 (257)
T ss_pred CCEEEECCCeEeec
Confidence 99999999976433
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=299.94 Aligned_cols=246 Identities=31% Similarity=0.450 Sum_probs=217.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++++|++||||+++|||+++++.|+++|++|++++|+.++.++..+++... +.++..+.+|+++.+++++++++.
T Consensus 3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--- 79 (259)
T PRK06125 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--- 79 (259)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh---
Confidence 4578999999999999999999999999999999999999888887777654 457888999999999998887653
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+.+++..|+++|
T Consensus 80 --g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask 157 (259)
T PRK06125 80 --GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGN 157 (259)
T ss_pred --CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHH
Confidence 689999999998777788899999999999999999999999999999988778999999999888888888999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
+|+++|+++++.|+.++||+||+|+||+++|++...... .++.........|.+++.+|+|+++++.||+++
T Consensus 158 ~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 237 (259)
T PRK06125 158 AALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASP 237 (259)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCc
Confidence 999999999999999999999999999999998654321 222233444567888899999999999999998
Q ss_pred CCCCccccEEEeCCCcCCCC
Q 024125 244 AASYITGQIISVDGGFTANG 263 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~~~ 263 (272)
...+++|+++.+|||+..+.
T Consensus 238 ~~~~~~G~~i~vdgg~~~~~ 257 (259)
T PRK06125 238 RSGYTSGTVVTVDGGISARG 257 (259)
T ss_pred hhccccCceEEecCCeeecC
Confidence 89999999999999987653
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=298.47 Aligned_cols=250 Identities=32% Similarity=0.530 Sum_probs=228.4
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++++++|+++||||+++||++++++|+++|++|++++|+.+.+++..++++..+.++.++.+|+++++++.++++++.+.
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 45689999999999999999999999999999999999998888888888776667889999999999999999999998
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|+++|
T Consensus 86 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 164 (256)
T PRK06124 86 H-GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAK 164 (256)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHH
Confidence 8 689999999998777788889999999999999999999999999999888889999999999988889999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.+++.++.|+.+++|+|++|+||+++|++.......++.........+.+++.+|+|++.++++|+++...+++|+
T Consensus 165 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~ 244 (256)
T PRK06124 165 QGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGH 244 (256)
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCC
Confidence 99999999999999999999999999999999866554444545556666788899999999999999999999999999
Q ss_pred EEEeCCCcCCC
Q 024125 252 IISVDGGFTAN 262 (272)
Q Consensus 252 ~i~~dgG~~~~ 262 (272)
.+.+|||+.+|
T Consensus 245 ~i~~dgg~~~~ 255 (256)
T PRK06124 245 VLAVDGGYSVH 255 (256)
T ss_pred EEEECCCcccc
Confidence 99999998876
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-44 Score=301.68 Aligned_cols=238 Identities=33% Similarity=0.462 Sum_probs=210.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+.. .++..+++|++++++++++++++.+++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~- 70 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY- 70 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 57899999999999999999999999999999999986431 257788999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||+|
T Consensus 71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa 150 (258)
T PRK06398 71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHA 150 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHH
Confidence 68999999999877788889999999999999999999999999999988777999999999999888999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-----CHHH----HHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-----NKEF----VDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
+++++++++.|+.+. |+||+|+||+++|++...... .++. ........|.++..+|+|++++++||+++.
T Consensus 151 l~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~ 229 (258)
T PRK06398 151 VLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDL 229 (258)
T ss_pred HHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999876 999999999999999754321 1111 122234568889999999999999999999
Q ss_pred CCCccccEEEeCCCcCCCCC
Q 024125 245 ASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~~~ 264 (272)
..+++|+++.+|||......
T Consensus 230 ~~~~~G~~i~~dgg~~~~~~ 249 (258)
T PRK06398 230 ASFITGECVTVDGGLRALIP 249 (258)
T ss_pred cCCCCCcEEEECCccccCCC
Confidence 99999999999999776543
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=298.06 Aligned_cols=245 Identities=30% Similarity=0.401 Sum_probs=219.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++...+.++.++.+|++++++++++++++.+++ +++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 7899999999999999999999999999999999988888888877666678889999999999999999999998 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
|++|||||.....++.+.+.+++++++++|+.+++.+++.+++.|++.+ .++||++||..+..+.++...|+++|++++
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR 160 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence 9999999987777888889999999999999999999999999998764 479999999998888888999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--------CHHH-HHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--------NKEF-VDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
.+++.++.|+.++||+|++|+||+++|+++..... ...+ ...+....+.+++.+|+|+++.+.||+++...
T Consensus 161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~ 240 (256)
T PRK08643 161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSD 240 (256)
T ss_pred HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999765321 1111 23344567888999999999999999999999
Q ss_pred CccccEEEeCCCcCCC
Q 024125 247 YITGQIISVDGGFTAN 262 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~ 262 (272)
+++|++|.+|||++.+
T Consensus 241 ~~~G~~i~vdgg~~~~ 256 (256)
T PRK08643 241 YITGQTIIVDGGMVFH 256 (256)
T ss_pred CccCcEEEeCCCeecC
Confidence 9999999999998764
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=297.09 Aligned_cols=248 Identities=33% Similarity=0.500 Sum_probs=221.1
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.++.+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|+++.++++++++.+.+
T Consensus 5 ~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred cccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999888888877776666788899999999999999999998
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.+ +++|++|||||...+.++ +.+.+++++.+++|+.+++++++++.|+|.+.+.++||++||..+..+.++...|+++
T Consensus 85 ~~-~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 162 (255)
T PRK06113 85 KL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS 162 (255)
T ss_pred Hc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHH
Confidence 88 689999999998655554 6788999999999999999999999999987777899999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+++|+++++.++.+.||+||+++||+++|++...... ++.........+.+++.+|+|+++++.+|+++...+++|
T Consensus 163 K~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G 241 (255)
T PRK06113 163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSG 241 (255)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence 9999999999999999999999999999999998765432 333444456677888999999999999999998999999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
++|++|||...
T Consensus 242 ~~i~~~gg~~~ 252 (255)
T PRK06113 242 QILTVSGGGVQ 252 (255)
T ss_pred CEEEECCCccc
Confidence 99999999654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=298.33 Aligned_cols=252 Identities=32% Similarity=0.527 Sum_probs=226.0
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
...+++++|++||||++++||++++++|+++|++|++++|+.+++++..+++...+.++.++++|+++.++++++++++.
T Consensus 3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (265)
T PRK07097 3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIE 82 (265)
T ss_pred ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999998888888887766788899999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+.+ +++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|+|++++.++||++||..+..+.++...|++
T Consensus 83 ~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 161 (265)
T PRK07097 83 KEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAA 161 (265)
T ss_pred HhC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHH
Confidence 998 6899999999987777888899999999999999999999999999998887899999999988888888999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
+|++++.+++++++++.++||+|++|+||+++|++...... ............|.+++.+|+|++..+.+|+++
T Consensus 162 sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 241 (265)
T PRK07097 162 AKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASD 241 (265)
T ss_pred HHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999998765432 112233344566788899999999999999998
Q ss_pred CCCCccccEEEeCCCcCCC
Q 024125 244 AASYITGQIISVDGGFTAN 262 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~~ 262 (272)
...+++|+++.+|||....
T Consensus 242 ~~~~~~g~~~~~~gg~~~~ 260 (265)
T PRK07097 242 ASNFVNGHILYVDGGILAY 260 (265)
T ss_pred ccCCCCCCEEEECCCceec
Confidence 8999999999999996654
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-43 Score=297.45 Aligned_cols=246 Identities=31% Similarity=0.457 Sum_probs=219.7
Q ss_pred CCCCCCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-C-CeEEEEEecCCCHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTR-GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-G-FVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~-giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
...+++|++|||||+| |||+++++.|+++|++|++++|+.+++++..++++.. + .++..+++|+++.++++++++++
T Consensus 12 ~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 12 HGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred ccccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 3456799999999985 9999999999999999999999998888887777652 3 46888999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhh
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||+++|..+..+.++...|
T Consensus 92 ~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y 170 (262)
T PRK07831 92 VERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHY 170 (262)
T ss_pred HHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcch
Confidence 9888 6899999999987777888899999999999999999999999999998776 6899999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+++|+|+++++++++.|+.++||+|++|+||+++|++..... ..+.........+.+++.+|+|+++.+.||+++...+
T Consensus 171 ~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~ 249 (262)
T PRK07831 171 AAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-SAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSY 249 (262)
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence 999999999999999999999999999999999999875432 2344444556678899999999999999999999999
Q ss_pred ccccEEEeCCCc
Q 024125 248 ITGQIISVDGGF 259 (272)
Q Consensus 248 ~~G~~i~~dgG~ 259 (272)
+||+++.+|+++
T Consensus 250 itG~~i~v~~~~ 261 (262)
T PRK07831 250 LTGEVVSVSSQH 261 (262)
T ss_pred cCCceEEeCCCC
Confidence 999999999976
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=297.40 Aligned_cols=253 Identities=28% Similarity=0.409 Sum_probs=223.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|++|||||++|||++++++|+++|++|++++|+ .+..+...+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999988885 445566666776666778889999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||...+.++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+||++||..+..+.++...|+++|
T Consensus 84 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 162 (261)
T PRK08936 84 -GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASK 162 (261)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHH
Confidence 6899999999987777888889999999999999999999999999998764 58999999999888889999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+|+++++++++.++.++||+|++|+||+++|++.......++.........|.+++.+|+|+++.+.+|+++...+++|+
T Consensus 163 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 242 (261)
T PRK08936 163 GGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGI 242 (261)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccCc
Confidence 99999999999999999999999999999999865433334444444566788999999999999999999999999999
Q ss_pred EEEeCCCcCCC-CCCCC
Q 024125 252 IISVDGGFTAN-GFNPG 267 (272)
Q Consensus 252 ~i~~dgG~~~~-~~~~~ 267 (272)
++.+|||+.+- +.|.|
T Consensus 243 ~i~~d~g~~~~~~~~~~ 259 (261)
T PRK08936 243 TLFADGGMTLYPSFQAG 259 (261)
T ss_pred EEEECCCcccCcccccc
Confidence 99999998754 66665
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=297.99 Aligned_cols=245 Identities=33% Similarity=0.465 Sum_probs=218.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|++|||||++|||++++++|+++|++|++++|+.+. ...+..+.++++|+++.++++++++.+.+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56889999999999999999999999999999999998754 1123467788999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.++ +.++||++||..+..+.++...|+++|
T Consensus 74 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK 152 (252)
T PRK07856 74 -GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK 152 (252)
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence 689999999998777777888999999999999999999999999999875 458999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+++++|+++++.|+.++ |+|++++||+++|++.......++....+....|.++..+|+|+++.+++|+++...+++|+
T Consensus 153 ~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~ 231 (252)
T PRK07856 153 AGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGA 231 (252)
T ss_pred HHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCC
Confidence 99999999999999988 99999999999999976544444444555667788999999999999999999889999999
Q ss_pred EEEeCCCcCCCCCCCC
Q 024125 252 IISVDGGFTANGFNPG 267 (272)
Q Consensus 252 ~i~~dgG~~~~~~~~~ 267 (272)
.|.+|||....+|..+
T Consensus 232 ~i~vdgg~~~~~~~~~ 247 (252)
T PRK07856 232 NLEVHGGGERPAFLAA 247 (252)
T ss_pred EEEECCCcchHHHHhh
Confidence 9999999998877654
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-44 Score=302.61 Aligned_cols=246 Identities=33% Similarity=0.434 Sum_probs=212.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++..+++|+++.++++++++++.+.+
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF- 78 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc-
Confidence 468999999999999999999999999999999999988877766554 3457788999999999999999999988
Q ss_pred CCccEEEECCCCCC-CCCCCCCCHHH----HHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 94 GKLNILVNNVGTNI-RKPTIEYSAEE----YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 94 ~~id~li~~ag~~~-~~~~~~~~~~~----~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+++|++|||||+.. ..++.+.+.++ |++++++|+.+++.++++++|.|++++ |+||++||..+..+.++...|+
T Consensus 79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~ 157 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYT 157 (263)
T ss_pred CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcCCCCCCchhH
Confidence 68999999999753 34555666665 889999999999999999999997654 8999999999988888889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhh---------hhCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERL---------LENKEFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
+||+|++.|+++++.|+.+. |+||+|+||+++|++.... ...++..+......|.+++.+|+|+++.+.|
T Consensus 158 ~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~f 236 (263)
T PRK06200 158 ASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVL 236 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhh
Confidence 99999999999999999885 9999999999999985321 0112223444566789999999999999999
Q ss_pred HhcCC-CCCccccEEEeCCCcCCCCCC
Q 024125 240 LCLPA-ASYITGQIISVDGGFTANGFN 265 (272)
Q Consensus 240 l~~~~-~~~~~G~~i~~dgG~~~~~~~ 265 (272)
|+++. +.++||++|.+|||+.+.+.+
T Consensus 237 l~s~~~~~~itG~~i~vdgG~~~~~~~ 263 (263)
T PRK06200 237 LASRRNSRALTGVVINADGGLGIRGIR 263 (263)
T ss_pred eecccccCcccceEEEEcCceeecccC
Confidence 99988 999999999999999888753
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=305.02 Aligned_cols=246 Identities=29% Similarity=0.375 Sum_probs=215.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH--HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++|++|||||++|||++++++|+++|++|+++.++.+ ..++..+.++..+.++.++.+|+++.++++++++++.+.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999998877543 345566666666778888999999999999999999998
Q ss_pred cCCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++ .++||++||..+..+.++...|++|
T Consensus 132 ~-g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~as 208 (300)
T PRK06128 132 L-GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYAST 208 (300)
T ss_pred h-CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHH
Confidence 8 6899999999975 3456788899999999999999999999999999864 3799999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+++|+++++.++.++||+||+|+||+++|++........+....+....|.+++.+|+|++.++.+|+++...+++|
T Consensus 209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G 288 (300)
T PRK06128 209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTG 288 (300)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence 99999999999999999999999999999999986432112344445556678999999999999999999988999999
Q ss_pred cEEEeCCCcCCC
Q 024125 251 QIISVDGGFTAN 262 (272)
Q Consensus 251 ~~i~~dgG~~~~ 262 (272)
+++.+|||+.++
T Consensus 289 ~~~~v~gg~~~~ 300 (300)
T PRK06128 289 EVFGVTGGLLLS 300 (300)
T ss_pred cEEeeCCCEeCc
Confidence 999999998763
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-43 Score=295.72 Aligned_cols=240 Identities=31% Similarity=0.389 Sum_probs=212.8
Q ss_pred CCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCC-----------hHHHHHHHHHHHhCCCeEEEEEecCCCHHH
Q 024125 14 SLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRN-----------EVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (272)
Q Consensus 14 ~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 80 (272)
.++||++|||||+ +|||++++++|+++|++|++++|+ .+...+..+++++.+.++..+++|+++.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 5889999999999 599999999999999999887532 233445556666667788899999999999
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH 160 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~ 160 (272)
++++++++.+.+ +++|++|||||.....++.+.+.++|++++++|+.+++.+.++++|.|++++.|+||++||..+..+
T Consensus 83 i~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 161 (256)
T PRK12859 83 PKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP 161 (256)
T ss_pred HHHHHHHHHHHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence 999999999988 6899999999987777888999999999999999999999999999998877799999999999998
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l 240 (272)
.++...|+++|+++++|+++++.++.++||+|++|+||+++|++... ...+......|.++..+|+|+++.+.+|
T Consensus 162 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~-----~~~~~~~~~~~~~~~~~~~d~a~~~~~l 236 (256)
T PRK12859 162 MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE-----EIKQGLLPMFPFGRIGEPKDAARLIKFL 236 (256)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999987432 2223344566888889999999999999
Q ss_pred hcCCCCCccccEEEeCCCc
Q 024125 241 CLPAASYITGQIISVDGGF 259 (272)
Q Consensus 241 ~~~~~~~~~G~~i~~dgG~ 259 (272)
+++...+++|+++.+|||+
T Consensus 237 ~s~~~~~~~G~~i~~dgg~ 255 (256)
T PRK12859 237 ASEEAEWITGQIIHSEGGF 255 (256)
T ss_pred hCccccCccCcEEEeCCCc
Confidence 9998999999999999996
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-43 Score=294.90 Aligned_cols=245 Identities=28% Similarity=0.418 Sum_probs=215.9
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
||++|||||++|||+++++.|+++|++|++++|+.++.++..+++...+.++.++.+|++++++++++++++.+.+ +++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence 5899999999999999999999999999999999988888877776555678889999999999999999999988 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
|++|||||.....++.+.+.++|++++++|+.++++++++++|+|.+. ..++||++||..+..+.+...+|++||+|++
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~ 159 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL 159 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence 999999997666777889999999999999999999999999998764 3589999999999888888899999999999
Q ss_pred HHHHHHHHHHcc-CCeeEEEeeCCcccCh-hhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 176 QLTRNLACEWAK-DNIRTNSVAPWYTKTS-LVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 176 ~~~~~la~el~~-~~i~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+|+++++.|+.+ +||+|++|+||+++|+ +.......++.........+.+++.+|+|+++++.+|+++...+++|+++
T Consensus 160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~ 239 (252)
T PRK07677 160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCI 239 (252)
T ss_pred HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEE
Confidence 999999999975 6999999999999964 33333233444455566778889999999999999999988899999999
Q ss_pred EeCCCcCCC
Q 024125 254 SVDGGFTAN 262 (272)
Q Consensus 254 ~~dgG~~~~ 262 (272)
.+|||+++.
T Consensus 240 ~~~gg~~~~ 248 (252)
T PRK07677 240 TMDGGQWLN 248 (252)
T ss_pred EECCCeecC
Confidence 999997765
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=294.39 Aligned_cols=249 Identities=31% Similarity=0.458 Sum_probs=218.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++|||||++|||++++++|+++|++|++++|+.+ ..+..+++...+.++.++.+|+++.++++++++++.+++
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 80 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE- 80 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 467899999999999999999999999999999999875 344445555555678889999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC-CCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~-~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|+|.+.+.++||++||..+ ..+.++...|+++|+
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~ 160 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA 160 (263)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHH
Confidence 6899999999987777888889999999999999999999999999998777789999999877 356677889999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
++++++++++.++.++||+|++++||+++|++...... ............|.+++.+|+|+++.+.||+++.+.
T Consensus 161 a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~ 240 (263)
T PRK08226 161 AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESS 240 (263)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhc
Confidence 99999999999999999999999999999999765431 122344455567888999999999999999999899
Q ss_pred CccccEEEeCCCcCCCCC
Q 024125 247 YITGQIISVDGGFTANGF 264 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~~~ 264 (272)
+++|+++.+|||.+++..
T Consensus 241 ~~~g~~i~~dgg~~~~~~ 258 (263)
T PRK08226 241 YLTGTQNVIDGGSTLPET 258 (263)
T ss_pred CCcCceEeECCCcccCce
Confidence 999999999999988754
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=303.72 Aligned_cols=250 Identities=24% Similarity=0.283 Sum_probs=199.0
Q ss_pred CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH----------hCCC-----eEEEEEecC
Q 024125 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ----------SKGF-----VVSGSVCDA 75 (272)
Q Consensus 13 ~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~----------~~~~-----~~~~~~~D~ 75 (272)
.+++||++||||++ +|||+++|+.|+++|++|++.++.+ .++...+... ..+. ++..+.+|+
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 82 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF 82 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence 46899999999996 9999999999999999999987541 1111100000 0000 011112222
Q ss_pred CC------------------HHHHHHHHHHHHHHcCCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHH
Q 024125 76 AS------------------PDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQ 135 (272)
Q Consensus 76 ~~------------------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 135 (272)
++ .++++++++++.+++ +++|++|||||... ..++.+.+.++|++.+++|+.+++++++
T Consensus 83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~ 161 (299)
T PRK06300 83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS 161 (299)
T ss_pred CCCEEeecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 22 246899999999999 79999999998743 4688899999999999999999999999
Q ss_pred HHHHHHHcCCCCeEEEecCCCCCCCCCCCh-hhHHHHHHHHHHHHHHHHHHcc-CCeeEEEeeCCcccChhhHhhhhCHH
Q 024125 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGS-IYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVERLLENKE 213 (272)
Q Consensus 136 ~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~PG~v~t~~~~~~~~~~~ 213 (272)
+++|+|+++ |+||+++|..+..+.+... .|++||+|+++|+++++.|+++ +|||||+|+||+++|++.......++
T Consensus 162 a~~p~m~~~--G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~ 239 (299)
T PRK06300 162 HFGPIMNPG--GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIER 239 (299)
T ss_pred HHHHHhhcC--CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHH
Confidence 999999754 7999999999888877764 8999999999999999999987 59999999999999998754322223
Q ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCCCCCC
Q 024125 214 FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANGFNP 266 (272)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~~~~ 266 (272)
.........|.++..+|+|+++.+.||+++...+++|+++.+|||+++.|+..
T Consensus 240 ~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~ 292 (299)
T PRK06300 240 MVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIGP 292 (299)
T ss_pred HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecCCc
Confidence 33344456788899999999999999999999999999999999998877653
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=295.17 Aligned_cols=242 Identities=36% Similarity=0.504 Sum_probs=208.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+.+++|+++||||++|||++++++|+++|++|++++|+.+... +++... .+.++.+|++|+++++++++++.+.+
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF 77 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999999988876654322 222222 36678999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-CCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-~~~~~~~Y~~sK 171 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+.. +.++...|++||
T Consensus 78 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 156 (255)
T PRK06463 78 -GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITK 156 (255)
T ss_pred -CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHH
Confidence 689999999998766778888999999999999999999999999999877779999999988774 346778899999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+|+++|+++++.|+.++||+|++++||+++|++....... +.....+....+.+++.+|+|+++.+.+|+++...++
T Consensus 157 aa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 236 (255)
T PRK06463 157 AGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYI 236 (255)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCC
Confidence 9999999999999999999999999999999997543222 1233445566788899999999999999999889999
Q ss_pred cccEEEeCCCcC
Q 024125 249 TGQIISVDGGFT 260 (272)
Q Consensus 249 ~G~~i~~dgG~~ 260 (272)
+|+++.+|||..
T Consensus 237 ~G~~~~~dgg~~ 248 (255)
T PRK06463 237 TGQVIVADGGRI 248 (255)
T ss_pred CCCEEEECCCee
Confidence 999999999965
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=300.73 Aligned_cols=241 Identities=24% Similarity=0.331 Sum_probs=200.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh----------HHHHHHHHHHHhCCCeEEEEEecCCCHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE----------VELNKCLKEWQSKGFVVSGSVCDAASPDQRE 82 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 82 (272)
.++++|++|||||++|||++++++|+++|++|++++|+. +++++..+++...+.++.++++|++++++++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~ 83 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR 83 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 357899999999999999999999999999999999973 4556666666666667888999999999999
Q ss_pred HHHHHHHHHcCCCccEEEECC-CCC----CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 83 KLIQEVGSKFNGKLNILVNNV-GTN----IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 83 ~~~~~~~~~~~~~id~li~~a-g~~----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
++++++.+++ +++|++|||| |.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+
T Consensus 84 ~~~~~~~~~~-g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~ 162 (305)
T PRK08303 84 ALVERIDREQ-GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA 162 (305)
T ss_pred HHHHHHHHHc-CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence 9999999998 6899999999 752 125677788999999999999999999999999998776799999999765
Q ss_pred CC---CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcCC-CCCCCCHHH
Q 024125 158 LS---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTP-LQRVGEPEE 232 (272)
Q Consensus 158 ~~---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~e 232 (272)
.. +.+....|++||+|+.+|+++++.|++++||+||+|+||+++|+|...... .++.........| .++..+|+|
T Consensus 163 ~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~pee 242 (305)
T PRK08303 163 EYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPRY 242 (305)
T ss_pred cccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHHH
Confidence 33 233567899999999999999999999999999999999999998643321 1111111122345 466779999
Q ss_pred HHHHHHHHhcCCC-CCccccEEE
Q 024125 233 VASLVAYLCLPAA-SYITGQIIS 254 (272)
Q Consensus 233 ~a~~~~~l~~~~~-~~~~G~~i~ 254 (272)
+++.+.||+++.. .++||++|.
T Consensus 243 vA~~v~fL~s~~~~~~itG~~l~ 265 (305)
T PRK08303 243 VGRAVAALAADPDVARWNGQSLS 265 (305)
T ss_pred HHHHHHHHHcCcchhhcCCcEEE
Confidence 9999999999774 699999986
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=296.74 Aligned_cols=249 Identities=27% Similarity=0.321 Sum_probs=210.8
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
..++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. +.++.++++|++|.++++++++++.+.
T Consensus 13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999998777776666532 356888999999999999999999999
Q ss_pred cCCCccEEEECCCCCCC--CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 92 FNGKLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+ +++|+||||||.... .++.+.+.++|++++++|+.++++++++++|+|.+++.|+||+++|..+..+.++..+|++
T Consensus 92 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~ 170 (280)
T PLN02253 92 F-GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTG 170 (280)
T ss_pred h-CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHH
Confidence 8 689999999997532 4577889999999999999999999999999998777789999999998877777889999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH----HHH----HHHHhcCCC-CCCCCHHHHHHHHHHH
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK----EFV----DKVIARTPL-QRVGEPEEVASLVAYL 240 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~----~~~----~~~~~~~~~-~~~~~~~e~a~~~~~l 240 (272)
||+|++.++++++.|+.++||+|++++||+++|++.....+.. ... .......+. ++..+|+|+++++.+|
T Consensus 171 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l 250 (280)
T PLN02253 171 SKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFL 250 (280)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhh
Confidence 9999999999999999999999999999999998754322111 111 111112222 4567999999999999
Q ss_pred hcCCCCCccccEEEeCCCcCCC
Q 024125 241 CLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 241 ~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+++...+++|+++.+|||+...
T Consensus 251 ~s~~~~~i~G~~i~vdgG~~~~ 272 (280)
T PLN02253 251 ASDEARYISGLNLMIDGGFTCT 272 (280)
T ss_pred cCcccccccCcEEEECCchhhc
Confidence 9998999999999999997643
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=290.55 Aligned_cols=244 Identities=32% Similarity=0.478 Sum_probs=215.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++.+|++|||||+++||++++++|+++|++|++++|+.+.. +...++. +.++..+.+|+++.++++++++++.+.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 568899999999999999999999999999999999987643 3333332 3456688999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.+++++++++|+.+++++++.+.|+|++++.++||++||..+..+.+....|+++|+
T Consensus 88 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 166 (255)
T PRK06841 88 -GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA 166 (255)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence 6899999999987777777889999999999999999999999999998877799999999998889999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
+++.++++++.++.++||+|++|+||+++|++....... ..........|.+++.+|+|+++.+++|+++...+++|+.
T Consensus 167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~ 245 (255)
T PRK06841 167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG-EKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGEN 245 (255)
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch-hHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCE
Confidence 999999999999999999999999999999986543322 2233345567888999999999999999999999999999
Q ss_pred EEeCCCcCC
Q 024125 253 ISVDGGFTA 261 (272)
Q Consensus 253 i~~dgG~~~ 261 (272)
|.+|||+++
T Consensus 246 i~~dgg~~~ 254 (255)
T PRK06841 246 LVIDGGYTI 254 (255)
T ss_pred EEECCCccC
Confidence 999999865
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-42 Score=289.93 Aligned_cols=251 Identities=28% Similarity=0.390 Sum_probs=219.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++|++|||||++|||++++++|+++|++|+++.+ +.+..++..+++...+.++.++.+|+++.++++++++++.+.+ +
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 79 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 3689999999999999999999999999988754 5666777777777667788999999999999999999999998 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
++|++|||||.....++.+.+.+++++++++|+.+++.+++++.++|.+++ .++||++||..+..+.++...|+++|++
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a 159 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHA 159 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHH
Confidence 899999999987767777889999999999999999999999999997653 4899999999998898999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+++++++++.++.++||+|++|+||+++|++.... ..+.........+.++..+|+|++..+.+++++...+++|+++
T Consensus 160 ~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 237 (256)
T PRK12743 160 LGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD--DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSL 237 (256)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEE
Confidence 99999999999999999999999999999986532 2233333445667888899999999999999998999999999
Q ss_pred EeCCCcCCCCCCCCCC
Q 024125 254 SVDGGFTANGFNPGIR 269 (272)
Q Consensus 254 ~~dgG~~~~~~~~~~~ 269 (272)
.+|||+++..+|--++
T Consensus 238 ~~dgg~~~~~~~~~~~ 253 (256)
T PRK12743 238 IVDGGFMLANPQFNSE 253 (256)
T ss_pred EECCCccccCCccccc
Confidence 9999988776554433
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-43 Score=296.75 Aligned_cols=246 Identities=28% Similarity=0.421 Sum_probs=206.6
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+. .+.++..+.+|+++.++++++++++.+.+
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999999998777665432 23467888999999999999999999988
Q ss_pred CCCccEEEECCCCCC-CCCCCCCCH----HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 93 NGKLNILVNNVGTNI-RKPTIEYSA----EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 93 ~~~id~li~~ag~~~-~~~~~~~~~----~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++|++|||||... ..++.+.+. ++|++++++|+.+++.++++++|+|.+.+ |++|+++|..+..+.++...|
T Consensus 78 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y 155 (262)
T TIGR03325 78 -GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLY 155 (262)
T ss_pred -CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchh
Confidence 68999999999743 234444443 57999999999999999999999997654 899999999888888888899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh---hCH-----HHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL---ENK-----EFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
++||+|+++|+++++.|++++ |+||+|+||+++|+|..... ... +..+......|.+++.+|+|+++++.|
T Consensus 156 ~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~ 234 (262)
T TIGR03325 156 TAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVF 234 (262)
T ss_pred HHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheee
Confidence 999999999999999999987 99999999999999864210 000 112223345789999999999999999
Q ss_pred HhcC-CCCCccccEEEeCCCcCCCCC
Q 024125 240 LCLP-AASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 240 l~~~-~~~~~~G~~i~~dgG~~~~~~ 264 (272)
|+++ ...+++|++|.+|||+.+.+.
T Consensus 235 l~s~~~~~~~tG~~i~vdgg~~~~~~ 260 (262)
T TIGR03325 235 FATRGDTVPATGAVLNYDGGMGVRGF 260 (262)
T ss_pred eecCCCcccccceEEEecCCeeeccc
Confidence 9986 467899999999999887653
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-42 Score=289.82 Aligned_cols=245 Identities=27% Similarity=0.360 Sum_probs=216.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|.+++|++||||+++|||+++++.|+++|++|++++|+.+..++..+++. .++.++.+|++|.++++++++++.+.+
T Consensus 2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG---PAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC---CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999988777665542 357788999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||.....++.+.+.+++++++++|+.+++.+++++.+.|.+++ .++||++||..+..+.++...|++||
T Consensus 79 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 157 (257)
T PRK07067 79 -GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATK 157 (257)
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhH
Confidence 6899999999987777888889999999999999999999999999997653 47999999998888888999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
++++.+++++++|+.++||+|+++.||+++|++...... ..+.........|.+++.+|+|+|+++.+|++
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 237 (257)
T PRK07067 158 AAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLAS 237 (257)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999998654311 11222334456788999999999999999999
Q ss_pred CCCCCccccEEEeCCCcCC
Q 024125 243 PAASYITGQIISVDGGFTA 261 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~ 261 (272)
+...+++|+++++|||..+
T Consensus 238 ~~~~~~~g~~~~v~gg~~~ 256 (257)
T PRK07067 238 ADADYIVAQTYNVDGGNWM 256 (257)
T ss_pred cccccccCcEEeecCCEeC
Confidence 9899999999999999765
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-42 Score=288.85 Aligned_cols=243 Identities=29% Similarity=0.427 Sum_probs=208.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++|||||++|||++++++|+++|++|++++|+.. ..+..+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF- 82 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc-
Confidence 477999999999999999999999999999999999853 445666666656678889999999999999999999988
Q ss_pred CCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+.. .+..+|++||+
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~ 160 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKG 160 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHH
Confidence 6899999999964 35677888999999999999999999999999999888778999999987642 34568999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-----hC------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-----EN------KEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-----~~------~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
|++.|+++++.++.++||+|++|+||+++|++..... .. +..........|.+++.+|+|+++++.||+
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 240 (260)
T PRK12823 161 GVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLA 240 (260)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHc
Confidence 9999999999999999999999999999998632110 00 122334445678889999999999999999
Q ss_pred cCCCCCccccEEEeCCCcC
Q 024125 242 LPAASYITGQIISVDGGFT 260 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~ 260 (272)
++...+++|+.+++|||..
T Consensus 241 s~~~~~~~g~~~~v~gg~~ 259 (260)
T PRK12823 241 SDEASYITGTVLPVGGGDL 259 (260)
T ss_pred CcccccccCcEEeecCCCC
Confidence 9888999999999999863
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=287.20 Aligned_cols=253 Identities=34% Similarity=0.494 Sum_probs=224.9
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+.++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++...+.++.++.+|+++.++++++++++.+.
T Consensus 5 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999998888888777666667888999999999999999999998
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|+|.+ .+.++||++||..+..+.++...|+++
T Consensus 85 ~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 163 (263)
T PRK07814 85 F-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTA 163 (263)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHH
Confidence 8 68999999999876677788899999999999999999999999999987 466899999999998888999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|++++.++++++.++.+ +|+|++|+||+++|++..................+..+..+|+|+++.++|++++...+++|
T Consensus 164 K~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g 242 (263)
T PRK07814 164 KAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTG 242 (263)
T ss_pred HHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCC
Confidence 99999999999999987 69999999999999987654334444445555667788889999999999999988899999
Q ss_pred cEEEeCCCcCCCCCCC
Q 024125 251 QIISVDGGFTANGFNP 266 (272)
Q Consensus 251 ~~i~~dgG~~~~~~~~ 266 (272)
+.+.+|||...+-.|+
T Consensus 243 ~~~~~~~~~~~~~~~~ 258 (263)
T PRK07814 243 KTLEVDGGLTFPNLDL 258 (263)
T ss_pred CEEEECCCccCCCCCC
Confidence 9999999988766554
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=287.70 Aligned_cols=249 Identities=29% Similarity=0.487 Sum_probs=218.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+.+
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56889999999999999999999999999999999999888877777776555567888999999999999999999888
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ |+|+++||..+..+.+....|+++|+
T Consensus 85 -~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~~~~~~~Y~asK~ 162 (264)
T PRK07576 85 -GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVCAAKA 162 (264)
T ss_pred -CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccCCCCccHHHHHHH
Confidence 6899999999976667778889999999999999999999999999997654 89999999998888888999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCccc-ChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTK-TSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+++.|+++++.++.++||+|++++||+++ |+......+.+..........|.++..+|+|+++.+.+++++...+++|+
T Consensus 163 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 242 (264)
T PRK07576 163 GVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGV 242 (264)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCC
Confidence 99999999999999999999999999997 66554443333333334455678888999999999999999888899999
Q ss_pred EEEeCCCcCCCC
Q 024125 252 IISVDGGFTANG 263 (272)
Q Consensus 252 ~i~~dgG~~~~~ 263 (272)
++.+|||+.+.+
T Consensus 243 ~~~~~gg~~~~~ 254 (264)
T PRK07576 243 VLPVDGGWSLGG 254 (264)
T ss_pred EEEECCCcccCc
Confidence 999999987653
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=284.73 Aligned_cols=244 Identities=28% Similarity=0.434 Sum_probs=216.8
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++|++||||+++|||++++++|+++|++|++. +|+....++..+++...+.++..+.+|++|.++++++++++.+.+
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV- 79 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence 468999999999999999999999999988774 556666666666666666678888999999999999999999988
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|++
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a 159 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG 159 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHH
Confidence 68999999999876677888899999999999999999999999999988877899999999988888899999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
++.++++++.++.++||++++|+||+++|++..... ++..+......+..+..+|+++++.+.+|+++...+++|+++
T Consensus 160 ~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~ 237 (246)
T PRK12938 160 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR--PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF 237 (246)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC--hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence 999999999999999999999999999999876542 344445555678888899999999999999988899999999
Q ss_pred EeCCCcCC
Q 024125 254 SVDGGFTA 261 (272)
Q Consensus 254 ~~dgG~~~ 261 (272)
.+|||..+
T Consensus 238 ~~~~g~~~ 245 (246)
T PRK12938 238 SLNGGLHM 245 (246)
T ss_pred EECCcccC
Confidence 99999765
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=286.80 Aligned_cols=247 Identities=29% Similarity=0.335 Sum_probs=218.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++|||||++|||++++++|+++|++|++++|+++..+++.+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF- 80 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999988888888877666678899999999999999999999998
Q ss_pred CCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||... ..++.+.+.+++++++++|+.+++.+++++.++|.+.+ ++||++||..+..+.++...|+++|+
T Consensus 81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~~~Y~~sK~ 159 (258)
T PRK07890 81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKG 159 (258)
T ss_pred CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCcchhHHHHH
Confidence 68999999999753 35677888999999999999999999999999997765 79999999999888889999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
+++.++++++.++.+++|++++++||++.|++...... .++.........+.+++.+|+|+++++.+++++
T Consensus 160 a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~ 239 (258)
T PRK07890 160 ALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASD 239 (258)
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCH
Confidence 99999999999999999999999999999998654321 122333344556788889999999999999998
Q ss_pred CCCCccccEEEeCCCcCCC
Q 024125 244 AASYITGQIISVDGGFTAN 262 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~~ 262 (272)
...+++|+.+.+|||.+++
T Consensus 240 ~~~~~~G~~i~~~gg~~~~ 258 (258)
T PRK07890 240 LARAITGQTLDVNCGEYHH 258 (258)
T ss_pred hhhCccCcEEEeCCccccC
Confidence 7889999999999998764
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=284.98 Aligned_cols=246 Identities=30% Similarity=0.466 Sum_probs=219.9
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++|++|||||+++||++++++|+++|++|++ ..|+.+..+++.++++..+.++.++.+|++|+++++++++++.+.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF- 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 46799999999999999999999999999776 5788888888888887767788889999999999999999999988
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|+||||||.....++.+.+.+++++++++|+.+++.+++++.|+|++++.++||++||..+..+.++...|+++|++
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a 160 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAA 160 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHH
Confidence 68999999999877788888999999999999999999999999999988888999999999888888888999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
++.|+++++.++.+.||++++++||+++|++...+..............+.+++.+++|+++.+++++++...+++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~ 240 (250)
T PRK08063 161 LEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTI 240 (250)
T ss_pred HHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence 99999999999999999999999999999997655433444444455567778899999999999999887889999999
Q ss_pred EeCCCcCC
Q 024125 254 SVDGGFTA 261 (272)
Q Consensus 254 ~~dgG~~~ 261 (272)
.+|||..+
T Consensus 241 ~~~gg~~~ 248 (250)
T PRK08063 241 IVDGGRSL 248 (250)
T ss_pred EECCCeee
Confidence 99999764
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=289.39 Aligned_cols=195 Identities=28% Similarity=0.329 Sum_probs=180.0
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CC-eEEEEEecCCCHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GF-VVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+..++||+|+|||||+|||.++|.+|+++|++++++.|+.++++...+++.+. .. ++..+++|++|.++++++++++.
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI 86 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999998888765 22 59999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+++ +++|++|||||........+.+.+++.+.|++|++|++.++++++|+|++++.|+||++||++|..++|..+.|++
T Consensus 87 ~~f-g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~A 165 (282)
T KOG1205|consen 87 RHF-GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSA 165 (282)
T ss_pred Hhc-CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccch
Confidence 999 7999999999997766777888899999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCC--eeEEEeeCCcccChhhHhh
Q 024125 170 TKAAMNQLTRNLACEWAKDN--IRTNSVAPWYTKTSLVERL 208 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~--i~v~~v~PG~v~t~~~~~~ 208 (272)
||+|+.+|.++|+.|+.+.+ |++ .|+||+|+|++....
T Consensus 166 SK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~ 205 (282)
T KOG1205|consen 166 SKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE 205 (282)
T ss_pred HHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence 99999999999999999987 666 999999999986543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=285.16 Aligned_cols=245 Identities=28% Similarity=0.346 Sum_probs=208.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
|.+++|++|||||++|||+++++.|+++|++|+++.+ +.+..+.+..++ ..++.++.+|+++.++++++++++.+.
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH 77 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999988655 455544444433 246788899999999999999999988
Q ss_pred cCCCccEEEECCCCCC------CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh
Q 024125 92 FNGKLNILVNNVGTNI------RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 92 ~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~ 165 (272)
++.++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|+|.+.+.++|+++||.....+..+..
T Consensus 78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 157 (253)
T PRK08642 78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYH 157 (253)
T ss_pred hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCcc
Confidence 8434999999998631 2456778899999999999999999999999999877779999999988777777788
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
.|+++|++++++++++++++.++||+||+|+||+++|+...... .+..........|.+++.+|+|+++.+.+|+++..
T Consensus 158 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 236 (253)
T PRK08642 158 DYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-PDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWA 236 (253)
T ss_pred chHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-CHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchh
Confidence 99999999999999999999999999999999999998654322 23334445566788899999999999999999989
Q ss_pred CCccccEEEeCCCcCC
Q 024125 246 SYITGQIISVDGGFTA 261 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~ 261 (272)
.+++|++|.+|||+..
T Consensus 237 ~~~~G~~~~vdgg~~~ 252 (253)
T PRK08642 237 RAVTGQNLVVDGGLVM 252 (253)
T ss_pred cCccCCEEEeCCCeec
Confidence 9999999999999765
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=314.09 Aligned_cols=244 Identities=35% Similarity=0.561 Sum_probs=215.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
...+|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++..+.+|++|.++++++++++.+.+
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 341 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW- 341 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc-
Confidence 457999999999999999999999999999999999988887776554 3466778999999999999999999998
Q ss_pred CCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||... ..++.+.+.++|++++++|+.+++++++.++|+| .+.|+||++||..+..+.++...|++||+
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKa 419 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKA 419 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHH
Confidence 69999999999853 4577788999999999999999999999999999 33489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++|+++++.|+.++||+||+|+||+++|++....... ......+....|.+++.+|+|+++.+.||+++...+++|+
T Consensus 420 al~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~ 499 (520)
T PRK06484 420 AVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGA 499 (520)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCc
Confidence 999999999999999999999999999999997654322 2233445566788899999999999999999889999999
Q ss_pred EEEeCCCcCCCC
Q 024125 252 IISVDGGFTANG 263 (272)
Q Consensus 252 ~i~~dgG~~~~~ 263 (272)
++.+|||+...+
T Consensus 500 ~i~vdgg~~~~~ 511 (520)
T PRK06484 500 TLTVDGGWTAFG 511 (520)
T ss_pred EEEECCCccCCC
Confidence 999999976543
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-42 Score=292.24 Aligned_cols=240 Identities=35% Similarity=0.420 Sum_probs=206.1
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++++|++||||+++|||++++++|+++|++|++++|+.+..+ ..++..+.+|+++.++++++++++.+.
T Consensus 4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (266)
T PRK06171 4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEK 74 (266)
T ss_pred cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999998875432 125677899999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCC---------CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC
Q 024125 92 FNGKLNILVNNVGTNIRKP---------TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG 162 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~---------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~ 162 (272)
+ +++|++|||||...... +.+.+.++|++++++|+.+++.+++++.|+|.+++.++||++||..+..+.+
T Consensus 75 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 153 (266)
T PRK06171 75 F-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE 153 (266)
T ss_pred c-CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC
Confidence 8 68999999999754322 3457889999999999999999999999999888779999999999988888
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCccc-ChhhHhhhh----------CHHHHHHHHh--cCCCCCCCC
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK-TSLVERLLE----------NKEFVDKVIA--RTPLQRVGE 229 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~-t~~~~~~~~----------~~~~~~~~~~--~~~~~~~~~ 229 (272)
+...|+++|+++++|+++++.|+.++||+||+|+||+++ |++...... ..+..+.+.. ..|+++..+
T Consensus 154 ~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 233 (266)
T PRK06171 154 GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGK 233 (266)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCC
Confidence 899999999999999999999999999999999999997 665321110 0122233333 578899999
Q ss_pred HHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 230 PEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 230 ~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
|+|+++++.||+++.+.++||++|.+|||+..
T Consensus 234 ~~eva~~~~fl~s~~~~~itG~~i~vdgg~~~ 265 (266)
T PRK06171 234 LSEVADLVCYLLSDRASYITGVTTNIAGGKTR 265 (266)
T ss_pred HHHhhhheeeeeccccccceeeEEEecCcccC
Confidence 99999999999999999999999999999765
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=289.97 Aligned_cols=233 Identities=28% Similarity=0.363 Sum_probs=198.9
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|+++|||+ ||||++++++|+ +|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++ +.+ +++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~i 77 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GPV 77 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CCC
Confidence 689999998 699999999996 8999999999988888887777666667888999999999999999988 456 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC---------------
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--------------- 161 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~--------------- 161 (272)
|++|||||+.. ..++|++++++|+.+++++++++.|.|+++ +++|++||..+....
T Consensus 78 d~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~ 148 (275)
T PRK06940 78 TGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPT 148 (275)
T ss_pred CEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhcccccccc
Confidence 99999999742 236789999999999999999999999754 678999998775432
Q ss_pred ---------------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-C-HHHHHHHHhcCCC
Q 024125 162 ---------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-N-KEFVDKVIARTPL 224 (272)
Q Consensus 162 ---------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~-~~~~~~~~~~~~~ 224 (272)
++...|++||+|++.++++++.|+.++||+||+|+||+++|++...... . .+.........|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~ 228 (275)
T PRK06940 149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA 228 (275)
T ss_pred ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc
Confidence 2467899999999999999999999999999999999999998654221 1 2223344456788
Q ss_pred CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 225 QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 225 ~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+++.+|+|+|+++.||+++...++||+.|.+|||..+.
T Consensus 229 ~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~ 266 (275)
T PRK06940 229 GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS 266 (275)
T ss_pred ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence 99999999999999999999999999999999997644
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=285.89 Aligned_cols=240 Identities=31% Similarity=0.406 Sum_probs=206.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+++||++|||||++|||++++++|+++|++|++++|+.+.. ...++.++++|++|.++++++++++.+.+
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 468899999999999999999999999999999999986531 12357788999999999999999999988
Q ss_pred CCCccEEEECCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC-CChhhHH
Q 024125 93 NGKLNILVNNVGTN--IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGSIYGA 169 (272)
Q Consensus 93 ~~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~-~~~~Y~~ 169 (272)
+++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.+ +...|++
T Consensus 76 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~ 154 (260)
T PRK06523 76 -GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAA 154 (260)
T ss_pred -CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHH
Confidence 6899999999964 24567778899999999999999999999999999988778999999999887755 7889999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---------HHHHHH---HHhcCCCCCCCCHHHHHHHH
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---------KEFVDK---VIARTPLQRVGEPEEVASLV 237 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~~~~---~~~~~~~~~~~~~~e~a~~~ 237 (272)
+|+++++++++++.++.++||+|++++||+++|++....... .+.... .....|.++..+|+|+++.+
T Consensus 155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~ 234 (260)
T PRK06523 155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELI 234 (260)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999986543210 111111 12346888899999999999
Q ss_pred HHHhcCCCCCccccEEEeCCCcCCC
Q 024125 238 AYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.||+++...+++|+++.+|||+.++
T Consensus 235 ~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 235 AFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred HHHhCcccccccCceEEecCCccCC
Confidence 9999998999999999999997653
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=282.97 Aligned_cols=244 Identities=30% Similarity=0.461 Sum_probs=218.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||+|+||++++++|+++|++|++++|+.++++++.+++.....++.++.+|+++.++++++++++.+.+
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 84 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA- 84 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc-
Confidence 5789999999999999999999999999999999999998888887776656678889999999999999999998888
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--------CCeEEEecCCCCCCCCCCCh
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--------VGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--------~g~ii~vsS~~~~~~~~~~~ 165 (272)
+++|++|||||.....++.+.+.++|+.++++|+.+++.++++++|.|.++. .++||++||..+..+.+...
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~ 164 (258)
T PRK06949 85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG 164 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCcc
Confidence 6899999999987777778888999999999999999999999999997653 37999999999888888889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
+|+++|++++.++++++.++.+++|+|++++||+++|++....... +.........+.+++..|+|+++.+.||+++.+
T Consensus 165 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~ 243 (258)
T PRK06949 165 LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET-EQGQKLVSMLPRKRVGKPEDLDGLLLLLAADES 243 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence 9999999999999999999999999999999999999997644322 223344556788899999999999999999999
Q ss_pred CCccccEEEeCCCc
Q 024125 246 SYITGQIISVDGGF 259 (272)
Q Consensus 246 ~~~~G~~i~~dgG~ 259 (272)
.+++|++|.+|||+
T Consensus 244 ~~~~G~~i~~dgg~ 257 (258)
T PRK06949 244 QFINGAIISADDGF 257 (258)
T ss_pred cCCCCcEEEeCCCC
Confidence 99999999999996
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=280.70 Aligned_cols=233 Identities=23% Similarity=0.299 Sum_probs=200.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++|||||++|||++++++|+++|++|++++|+.+... +++...+ +.++.+|+++.++++++++++.+.+ +++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 75 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHT-DGL 75 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhC-CCc
Confidence 689999999999999999999999999999999876543 2333322 5678999999999999999999988 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
|++|||||........+.+.++|++++++|+.+++.+++.++|.|++.+ .++||++||..+..+.++...|++||+++
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal 155 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL 155 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence 9999999986555566778999999999999999999999999998765 58999999999888888899999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
++|++++++|+++ +||||+|+||++.|+... .+..........+.++..+|+|+++.+.||++ ..+++|+++.
T Consensus 156 ~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~ 228 (236)
T PRK06483 156 DNMTLSFAAKLAP-EVKVNSIAPALILFNEGD----DAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRSLP 228 (236)
T ss_pred HHHHHHHHHHHCC-CcEEEEEccCceecCCCC----CHHHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCcEEE
Confidence 9999999999987 599999999999876421 12223334456688888999999999999996 6899999999
Q ss_pred eCCCcCCC
Q 024125 255 VDGGFTAN 262 (272)
Q Consensus 255 ~dgG~~~~ 262 (272)
+|||.+++
T Consensus 229 vdgg~~~~ 236 (236)
T PRK06483 229 VDGGRHLK 236 (236)
T ss_pred eCcccccC
Confidence 99998764
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-44 Score=270.86 Aligned_cols=240 Identities=33% Similarity=0.416 Sum_probs=219.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+|.|+++++||++-|||++++++|++.|++|+.+.|+++.+..+.++.. ..+..+..|+++.+.+.+.+..+
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v----- 75 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPV----- 75 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhccc-----
Confidence 5789999999999999999999999999999999999999888877654 34677889999988887777554
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK-ASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|.++||||+....+|.+++.++|++.|++|+.+.+.+.|....-+. ++..|.|+|+||.++.++..+...||++|+
T Consensus 76 ~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKa 155 (245)
T KOG1207|consen 76 FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKA 155 (245)
T ss_pred CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHH
Confidence 5899999999999999999999999999999999999999998555443 445588999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
|+++++|+++.||++++||||++.|-.+.|+|-+.-.++|+.........|++++..++|+.+++.||+|+.+...||.+
T Consensus 156 ALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGst 235 (245)
T KOG1207|consen 156 ALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGST 235 (245)
T ss_pred HHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCce
Confidence 99999999999999999999999999999999988778888888889999999999999999999999999999999999
Q ss_pred EEeCCCcCC
Q 024125 253 ISVDGGFTA 261 (272)
Q Consensus 253 i~~dgG~~~ 261 (272)
+.++||++.
T Consensus 236 lpveGGfs~ 244 (245)
T KOG1207|consen 236 LPVEGGFSN 244 (245)
T ss_pred eeecCCccC
Confidence 999999874
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=279.93 Aligned_cols=247 Identities=31% Similarity=0.421 Sum_probs=222.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++||||++|+||++++++|+++|++|++++|+.++.++..++++..+.++.++.+|+++.++++++++++.+.+
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 82 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL- 82 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 3678999999999999999999999999999999999988888888776666678889999999999999999999988
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+.|+|.+++.+++|++||..+..+.+....|+++|++
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~ 162 (250)
T PRK12939 83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGA 162 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHH
Confidence 68999999999877777888899999999999999999999999999988777999999999988888888999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
++.+++.++.++.+++|+|+.++||+++|++...... ...........+..++.+|+|+++++.+++++...+++|+.|
T Consensus 163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i 241 (250)
T PRK12939 163 VIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLL 241 (250)
T ss_pred HHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEE
Confidence 9999999999999999999999999999999765422 234444555678888999999999999999887889999999
Q ss_pred EeCCCcCCC
Q 024125 254 SVDGGFTAN 262 (272)
Q Consensus 254 ~~dgG~~~~ 262 (272)
.+|||.+++
T Consensus 242 ~~~gg~~~~ 250 (250)
T PRK12939 242 PVNGGFVMN 250 (250)
T ss_pred EECCCcccC
Confidence 999998875
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=282.29 Aligned_cols=244 Identities=26% Similarity=0.331 Sum_probs=213.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-C-CeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-G-FVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+|++|||||+++||++++++|+++|++|++++|+.+..++..+++... + .++..+.+|+++.++++++++++.+.+ +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-G 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 689999999999999999999999999999999988887777666543 2 468889999999999999999999998 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.+....|++||+|
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa 160 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG 160 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence 899999999988778888899999999999999999999999999998776 5899999998887777888899999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcc-cChhhHhhhh---------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYT-KTSLVERLLE---------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v-~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
+++++++++.|+.++||+|++++||.+ .|++.....+ ..+.........+.+++.+|+|+++++.+|++.
T Consensus 161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~ 240 (259)
T PRK12384 161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP 240 (259)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence 999999999999999999999999964 7776543322 122333345567889999999999999999998
Q ss_pred CCCCccccEEEeCCCcCC
Q 024125 244 AASYITGQIISVDGGFTA 261 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~ 261 (272)
...+++|+++++|||..+
T Consensus 241 ~~~~~~G~~~~v~~g~~~ 258 (259)
T PRK12384 241 KASYCTGQSINVTGGQVM 258 (259)
T ss_pred ccccccCceEEEcCCEEe
Confidence 888999999999999753
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=279.48 Aligned_cols=246 Identities=28% Similarity=0.458 Sum_probs=221.4
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+++|++|||||+|+||++++++|+++|++|++++|+.+...++.+++...+.++.++.+|+++.++++++++++.+.+ +
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~ 79 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-G 79 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 468999999999999999999999999999999999988888777776666678889999999999999999999888 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.|.|++.+.++||++||..+..+.+....|+++|+|+
T Consensus 80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~ 159 (250)
T TIGR03206 80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL 159 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHH
Confidence 89999999998777777888899999999999999999999999999888778999999999988889999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
+.++++++.++.+.+++++.++||+++|++...... .......+....+.+++.+|+|+|+.+.+++++...+++|
T Consensus 160 ~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g 239 (250)
T TIGR03206 160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITG 239 (250)
T ss_pred HHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcC
Confidence 999999999999899999999999999998765432 1223445566778888999999999999999999999999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
+++.+|||.++
T Consensus 240 ~~~~~~~g~~~ 250 (250)
T TIGR03206 240 QVLSVSGGLTM 250 (250)
T ss_pred cEEEeCCCccC
Confidence 99999999764
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=280.13 Aligned_cols=240 Identities=28% Similarity=0.369 Sum_probs=213.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++||||++++||++++++|+++|++|++++|+. +...+.++..+++|+++.++++++++++.+++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET 74 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 678899999999999999999999999999999999976 12234567888999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.|+|++++.++||++||..+..+.++...|+++|+
T Consensus 75 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~ 153 (252)
T PRK08220 75 -GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKA 153 (252)
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHH
Confidence 6899999999987777888889999999999999999999999999998887789999999998888888899999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH--------HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE--------FVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
+++.+++++++++.++||+|+++.||+++|++......... ..+......|.+++.+|+|+++++++|+++.
T Consensus 154 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 233 (252)
T PRK08220 154 ALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDL 233 (252)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcch
Confidence 99999999999999999999999999999998755432111 1223344567888999999999999999998
Q ss_pred CCCccccEEEeCCCcCCC
Q 024125 245 ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~ 262 (272)
..+++|+++.+|||.+++
T Consensus 234 ~~~~~g~~i~~~gg~~~~ 251 (252)
T PRK08220 234 ASHITLQDIVVDGGATLG 251 (252)
T ss_pred hcCccCcEEEECCCeecC
Confidence 999999999999998875
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=280.65 Aligned_cols=245 Identities=28% Similarity=0.339 Sum_probs=210.1
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+..+++||++|||||+++||+++++.|+++|++|++++|+.++.++..+++ +.++.++++|+++.++++++++++.+
T Consensus 4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999887766655443 34678889999999999999999999
Q ss_pred HcCCCccEEEECCCCCCC--CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 91 KFNGKLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
++ +++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++.|+|++.. ++||++||..+..+.+....|+
T Consensus 81 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~ii~~sS~~~~~~~~~~~~Y~ 158 (255)
T PRK05717 81 QF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN-GAIVNLASTRARQSEPDTEAYA 158 (255)
T ss_pred Hh-CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-cEEEEEcchhhcCCCCCCcchH
Confidence 88 689999999997543 4667789999999999999999999999999997654 8999999999988888899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
++|++++.+++++++++.+ +|+|++++||+++|++..... ............+.++..+|+|++..+.+++++...++
T Consensus 159 ~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~ 236 (255)
T PRK05717 159 ASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFV 236 (255)
T ss_pred HHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence 9999999999999999976 499999999999998753321 11222222345678899999999999999999888899
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
+|+.+.+|||+...
T Consensus 237 ~g~~~~~~gg~~~~ 250 (255)
T PRK05717 237 TGQEFVVDGGMTRK 250 (255)
T ss_pred cCcEEEECCCceEE
Confidence 99999999997653
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=284.20 Aligned_cols=247 Identities=33% Similarity=0.457 Sum_probs=216.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++|++|||||++|||++++++|+++|++|++++|+.+ ..+...+.+...+.++.++.+|+++.++++++++++.+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999853 345555555555667888999999999999999999998
Q ss_pred cCCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++++|++. ++||++||..+..+.+....|+++
T Consensus 122 ~-~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~s 198 (290)
T PRK06701 122 L-GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG--SAIINTGSITGYEGNETLIDYSAT 198 (290)
T ss_pred c-CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC--CeEEEEecccccCCCCCcchhHHH
Confidence 8 68999999999753 3567788999999999999999999999999999543 799999999998888888999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|++.++++++.++.++||+|++|+||+++|++..... .++....+....+.+++.+|+|+++++++|+++...+++|
T Consensus 199 K~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G 277 (290)
T PRK06701 199 KGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-DEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITG 277 (290)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccC
Confidence 999999999999999999999999999999999865432 2333444556678888999999999999999998999999
Q ss_pred cEEEeCCCcCCCC
Q 024125 251 QIISVDGGFTANG 263 (272)
Q Consensus 251 ~~i~~dgG~~~~~ 263 (272)
+.|.+|||..++|
T Consensus 278 ~~i~idgg~~~~~ 290 (290)
T PRK06701 278 QMLHVNGGVIVNG 290 (290)
T ss_pred cEEEeCCCcccCC
Confidence 9999999987764
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=278.27 Aligned_cols=247 Identities=34% Similarity=0.503 Sum_probs=219.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+.. +.++.++.+|+++.++++++++++.+++
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999999999888877776654 5578889999999999999999998888
Q ss_pred CCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|+||||||.. ...++.+.+.+++++.+++|+.+++.+++.++++|.+++.++||++||..+..+.++...|+.+|
T Consensus 80 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk 158 (251)
T PRK07231 80 -GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASK 158 (251)
T ss_pred -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence 6899999999974 34457788999999999999999999999999999888789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN--KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
++++.+++.++.++.+++|++++++||+++|++....... ++.........+.+++.+|+|+++++++++++...+++
T Consensus 159 ~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~ 238 (251)
T PRK07231 159 GAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWIT 238 (251)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence 9999999999999999999999999999999997655431 23344455667888889999999999999998888999
Q ss_pred ccEEEeCCCcCC
Q 024125 250 GQIISVDGGFTA 261 (272)
Q Consensus 250 G~~i~~dgG~~~ 261 (272)
|+++.+|||..+
T Consensus 239 g~~~~~~gg~~~ 250 (251)
T PRK07231 239 GVTLVVDGGRCV 250 (251)
T ss_pred CCeEEECCCccC
Confidence 999999999765
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=279.19 Aligned_cols=246 Identities=34% Similarity=0.530 Sum_probs=217.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|++|||||+|+||++++++|+++|++|++++|+.++++...+++...+.++.++++|++|+++++++++++.+.+
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999999988888887777666678889999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH-HHcCCCCeEEEecCCCCCCCCCC----Chhh
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL-LKASGVGSIVFISSVGGLSHVGS----GSIY 167 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~-~~~~~~g~ii~vsS~~~~~~~~~----~~~Y 167 (272)
+++|++|||||.....+..+.+.+.|++.+++|+.+++.+++++.|+ |.+++.++||++||..+..+.++ ...|
T Consensus 88 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y 166 (259)
T PRK08213 88 -GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY 166 (259)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence 68999999999876677778899999999999999999999999998 77777789999999876655443 4889
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+++|++++.+++++++++.++||++++++||+++|++..... +...+......|..++++|+|+++.+.+++++...+
T Consensus 167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~ 244 (259)
T PRK08213 167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKH 244 (259)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 999999999999999999999999999999999999865543 233344556678888899999999999999999999
Q ss_pred ccccEEEeCCCcCC
Q 024125 248 ITGQIISVDGGFTA 261 (272)
Q Consensus 248 ~~G~~i~~dgG~~~ 261 (272)
++|+++.+|||.++
T Consensus 245 ~~G~~~~~~~~~~~ 258 (259)
T PRK08213 245 ITGQILAVDGGVSA 258 (259)
T ss_pred ccCCEEEECCCeec
Confidence 99999999999764
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=280.73 Aligned_cols=245 Identities=32% Similarity=0.386 Sum_probs=211.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+.. +..+++...+.++.++.+|+++.++++++++++.+.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 568999999999999999999999999999999999988776 6666666666678899999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||......+.+.. ++|++.+++|+.+++.+++.+.|+|++.. ++|+++||..+..+.++...|++||+
T Consensus 82 -~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~iv~~ss~~~~~~~~~~~~Y~~sK~ 158 (258)
T PRK08628 82 -GRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASR-GAIVNISSKTALTGQGGTSGYAAAKG 158 (258)
T ss_pred -CCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccC-cEEEEECCHHhccCCCCCchhHHHHH
Confidence 6899999999975555555544 99999999999999999999999997654 89999999999888888999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CH-HHHHHHHhcCCCC-CCCCHHHHHHHHHHHhcCCCCC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NK-EFVDKVIARTPLQ-RVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~-~~~~~~~~~~~~~-~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++++++++++.|+.+++|+|++|+||.++|++...+.. .+ ..........+.+ ++.+|+|+++.+.+++++...+
T Consensus 159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 238 (258)
T PRK08628 159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSH 238 (258)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhcc
Confidence 99999999999999999999999999999998654321 11 1222233344553 7889999999999999998899
Q ss_pred ccccEEEeCCCcCC
Q 024125 248 ITGQIISVDGGFTA 261 (272)
Q Consensus 248 ~~G~~i~~dgG~~~ 261 (272)
.+|+++.+|||++.
T Consensus 239 ~~g~~~~~~gg~~~ 252 (258)
T PRK08628 239 TTGQWLFVDGGYVH 252 (258)
T ss_pred ccCceEEecCCccc
Confidence 99999999999754
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=277.70 Aligned_cols=243 Identities=33% Similarity=0.416 Sum_probs=217.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|+++|||++|+||++++++|+++|++|++++|+.+..++..+++...+.++..+.+|++|+++++++++++.+.+ +++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999888888888887767788899999999999999999999988 6899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
++|||||.....++.+.+.++|++++++|+.+++.+++.+++.|++++ .++||++||..+..+.+....|+++|++++.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 159 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG 159 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence 999999987777888899999999999999999999999999998765 3799999999988888899999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
|++.++.++.+.+|+|++++||+++|++....... ...........+.+++.+|+|+++++.+|+++...+
T Consensus 160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~ 239 (254)
T TIGR02415 160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY 239 (254)
T ss_pred HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCC
Confidence 99999999999999999999999999997554321 112233445678888999999999999999998999
Q ss_pred ccccEEEeCCCcCC
Q 024125 248 ITGQIISVDGGFTA 261 (272)
Q Consensus 248 ~~G~~i~~dgG~~~ 261 (272)
++|+++.+|||...
T Consensus 240 ~~g~~~~~d~g~~~ 253 (254)
T TIGR02415 240 ITGQSILVDGGMVY 253 (254)
T ss_pred ccCcEEEecCCccC
Confidence 99999999999764
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=278.19 Aligned_cols=222 Identities=27% Similarity=0.338 Sum_probs=201.7
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.+.+.++++|++||||||++|||+++|.+|+++|+.+++.+.+.+..++..+++++.+ ++....||+++.+++.+..++
T Consensus 29 l~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~ 107 (300)
T KOG1201|consen 29 LPKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKK 107 (300)
T ss_pred cccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHH
Confidence 4557788999999999999999999999999999999999999999999999998775 899999999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++.. |.+|++|||||+.+..++.+.+.+++++++++|+.|.+.++|+++|.|.+.+.|+||+++|.+|..+.++...|
T Consensus 108 Vk~e~-G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~Y 186 (300)
T KOG1201|consen 108 VKKEV-GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADY 186 (300)
T ss_pred HHHhc-CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhh
Confidence 99999 69999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccC---CeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 168 GATKAAMNQLTRNLACEWAKD---NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~---~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
|+||+|+.+|.++|+.|+... ||+...++|++++|+|.....+.+ ......+|+++|+.++..+
T Consensus 187 caSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~----------~l~P~L~p~~va~~Iv~ai 253 (300)
T KOG1201|consen 187 CASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP----------TLAPLLEPEYVAKRIVEAI 253 (300)
T ss_pred hhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc----------cccCCCCHHHHHHHHHHHH
Confidence 999999999999999998554 699999999999999987511111 1233568888888887655
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=275.92 Aligned_cols=241 Identities=32% Similarity=0.473 Sum_probs=210.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++|||||+++||++++++|+++|++|++++|+.+.+++..+++ +.++..+++|+++.+++.++++++.+.+
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF- 78 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 467899999999999999999999999999999999987776665544 4567788999999999999999999988
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.+++++++++|+.+++.++++++|+|++. +++|+++|..+..+.+....|+++|++
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~i~~~S~~~~~~~~~~~~Y~~sK~a 156 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP--ASIVLNGSINAHIGMPNSSVYAASKAA 156 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechHhccCCCCccHHHHHHHH
Confidence 689999999998777777888999999999999999999999999998643 789999998888888889999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
+++++++++.|+.++||++++++||+++|++....... ...........|..++.+|+|+++++.+++++...+++
T Consensus 157 ~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 236 (249)
T PRK06500 157 LLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIV 236 (249)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence 99999999999999999999999999999987543111 22333444556788889999999999999998889999
Q ss_pred ccEEEeCCCcC
Q 024125 250 GQIISVDGGFT 260 (272)
Q Consensus 250 G~~i~~dgG~~ 260 (272)
|+.|.+|||.+
T Consensus 237 g~~i~~~gg~~ 247 (249)
T PRK06500 237 GSEIIVDGGMS 247 (249)
T ss_pred CCeEEECCCcc
Confidence 99999999953
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=275.32 Aligned_cols=243 Identities=28% Similarity=0.417 Sum_probs=215.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
|++++|++|||||+++||++++++|+++|++|+++.|+ ++..++..+++...+.++.++.+|+++.++++++++++.+.
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998887765 44456666667666678899999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|++|||||.....++.+.+.+++++++++|+.+++.++++++|.|.+ .++||++||..+..+.++...|+++|
T Consensus 81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK 157 (245)
T PRK12937 81 F-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASK 157 (245)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHH
Confidence 8 68999999999877777788899999999999999999999999999864 37999999999888888999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.++.+.+|++++++||+++|++..... .++....+....|.++..+|+|+++.+.+++++...+++|+
T Consensus 158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~ 236 (245)
T PRK12937 158 AAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK-SAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQ 236 (245)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCcccc
Confidence 99999999999999999999999999999999864321 23445566677888999999999999999999888899999
Q ss_pred EEEeCCCc
Q 024125 252 IISVDGGF 259 (272)
Q Consensus 252 ~i~~dgG~ 259 (272)
.+++|||.
T Consensus 237 ~~~~~~g~ 244 (245)
T PRK12937 237 VLRVNGGF 244 (245)
T ss_pred EEEeCCCC
Confidence 99999985
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=276.03 Aligned_cols=247 Identities=31% Similarity=0.455 Sum_probs=217.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|++|||||+|+||++++++|+++|++|++++|+.+..++..+++. .+.++..+++|++|.++++++++++.+++
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999888777776665 45578889999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||+|......+.+.+.+++++++++|+.+++.+++.++|.|++++.++|+++||..+..+.++...|+.+|+
T Consensus 80 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~ 158 (252)
T PRK06138 80 -GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG 158 (252)
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence 6899999999987777778889999999999999999999999999999888889999999988888888899999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---HH-HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---KE-FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+++.++++++.++.+.|++|++++||++.|++....... ++ .........+..++.+|+|+++.+.++++....++
T Consensus 159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~ 238 (252)
T PRK06138 159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFA 238 (252)
T ss_pred HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence 999999999999999999999999999999987654321 22 22222234456668899999999999999888999
Q ss_pred cccEEEeCCCcCC
Q 024125 249 TGQIISVDGGFTA 261 (272)
Q Consensus 249 ~G~~i~~dgG~~~ 261 (272)
+|+.+.+|||++.
T Consensus 239 ~g~~~~~~~g~~~ 251 (252)
T PRK06138 239 TGTTLVVDGGWLA 251 (252)
T ss_pred cCCEEEECCCeec
Confidence 9999999999764
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=274.70 Aligned_cols=242 Identities=32% Similarity=0.465 Sum_probs=213.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
|++||||++++||++++++|+++|++|++++|+.+ ...+....+...+.++.++.+|+++.++++++++++.+++ +++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999854 2333333333345578889999999999999999999988 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|++|||+|.....++.+.+.++|++++++|+.++++++++++|+|++.+.++||++||..+..+.++...|+++|+++++
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 99999999877777888899999999999999999999999999988777899999999998888899999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeC
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVD 256 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~d 256 (272)
+++.++.++.++||+++.++||+++|++..... +.....+....+.+...+++|+++.+.+|+++...+++|+.+.+|
T Consensus 162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~ 239 (245)
T PRK12824 162 FTKALASEGARYGITVNCIAPGYIATPMVEQMG--PEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISIN 239 (245)
T ss_pred HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEEC
Confidence 999999999999999999999999999876542 344455566678888899999999999999888889999999999
Q ss_pred CCcCCC
Q 024125 257 GGFTAN 262 (272)
Q Consensus 257 gG~~~~ 262 (272)
||.++|
T Consensus 240 ~g~~~~ 245 (245)
T PRK12824 240 GGLYMH 245 (245)
T ss_pred CCeecC
Confidence 999875
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=281.59 Aligned_cols=238 Identities=25% Similarity=0.294 Sum_probs=207.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-------HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-------LNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 85 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+. +++..+++...+.++..+.+|+++.+++++++
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 45789999999999999999999999999999999997643 34455556555667888999999999999999
Q ss_pred HHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC--CC
Q 024125 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--GS 163 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~--~~ 163 (272)
+++.+.+ +++|++|||||.....++.+.+.+++++++++|+.+++.++++++|+|++++.++|+++||..+..+. ++
T Consensus 82 ~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 160 (273)
T PRK08278 82 AKAVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAP 160 (273)
T ss_pred HHHHHHh-CCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCC
Confidence 9999888 68999999999877778888899999999999999999999999999998877899999998877766 78
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCC-cccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW-YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
...|++||+++++|+++++.|+.+++|+|++|+|| +++|++....... ..+..+..+|+++++.++++++
T Consensus 161 ~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~---------~~~~~~~~~p~~va~~~~~l~~ 231 (273)
T PRK08278 161 HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG---------DEAMRRSRTPEIMADAAYEILS 231 (273)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc---------cccccccCCHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999 6899876654221 1244567899999999999999
Q ss_pred CCCCCccccEEEeCCCcCC
Q 024125 243 PAASYITGQIISVDGGFTA 261 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~ 261 (272)
+...+++|+.+ +|++...
T Consensus 232 ~~~~~~~G~~~-~~~~~~~ 249 (273)
T PRK08278 232 RPAREFTGNFL-IDEEVLR 249 (273)
T ss_pred CccccceeEEE-eccchhh
Confidence 88889999988 5777543
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=274.80 Aligned_cols=236 Identities=29% Similarity=0.416 Sum_probs=209.1
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
+|||||++|||+++++.|+++|++|++++|+ .+..++..++++..+.++.++.+|+++.++++++++++.+.+ +++|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence 5899999999999999999999999888765 556677777777666788999999999999999999988888 68999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHH-HHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 99 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
+|||+|.....++.+.+.++|+.++++|+.++++++++++ |.+++++.++||++||..+..+.++...|+++|++++++
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 159 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA 159 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence 9999998777777788999999999999999999999875 555556668999999999988989999999999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCC
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDG 257 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dg 257 (272)
+++++.|+.++||+|++++||+++|++..... +..+......|++++.+|+|+++.+.||+++...+++|+.+.+||
T Consensus 160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g 236 (239)
T TIGR01831 160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVE---HDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNG 236 (239)
T ss_pred HHHHHHHHhHhCeEEEEEEEccCccccchhhh---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence 99999999999999999999999999976542 223344556788999999999999999999999999999999999
Q ss_pred Cc
Q 024125 258 GF 259 (272)
Q Consensus 258 G~ 259 (272)
|.
T Consensus 237 g~ 238 (239)
T TIGR01831 237 GM 238 (239)
T ss_pred Cc
Confidence 95
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=284.98 Aligned_cols=242 Identities=27% Similarity=0.379 Sum_probs=208.0
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
..++++|++|||||++|||++++++|+++|++|++.+++ .+..++..+++...+.++..+.+|++|.++++++++++.+
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~ 86 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG 86 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999875 4556677777776677888999999999999999999988
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-------CCeEEEecCCCCCCCCCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-------VGSIVFISSVGGLSHVGS 163 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~g~ii~vsS~~~~~~~~~ 163 (272)
+ +++|++|||||+.....+.+.+.++|++.+++|+.+++.+++++.|+|+++. .|+||++||..+..+.++
T Consensus 87 -~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 164 (306)
T PRK07792 87 -L-GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG 164 (306)
T ss_pred -h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC
Confidence 7 6999999999987777788889999999999999999999999999997531 379999999999888888
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
...|+++|+++++|+++++.|+.++||+||+|+||. .|+|............ . ......+|+++++.+.||+++
T Consensus 165 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~--~---~~~~~~~pe~va~~v~~L~s~ 238 (306)
T PRK07792 165 QANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVE--A---GGIDPLSPEHVVPLVQFLASP 238 (306)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchhh--h---hccCCCCHHHHHHHHHHHcCc
Confidence 899999999999999999999999999999999994 8888654322111000 0 112235899999999999998
Q ss_pred CCCCccccEEEeCCCcCC
Q 024125 244 AASYITGQIISVDGGFTA 261 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~ 261 (272)
...+++|+++.+|||...
T Consensus 239 ~~~~~tG~~~~v~gg~~~ 256 (306)
T PRK07792 239 AAAEVNGQVFIVYGPMVT 256 (306)
T ss_pred cccCCCCCEEEEcCCeEE
Confidence 888999999999999765
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=276.68 Aligned_cols=242 Identities=30% Similarity=0.409 Sum_probs=209.9
Q ss_pred CCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCC-----------hHHHHHHHHHHHhCCCeEEEEEecCCCHH
Q 024125 13 WSLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRN-----------EVELNKCLKEWQSKGFVVSGSVCDAASPD 79 (272)
Q Consensus 13 ~~l~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 79 (272)
+++++|++|||||++ |||++++++|+++|++|++++|+ .+....+.+++...+.++.++.+|+++.+
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 80 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY 80 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 357899999999995 99999999999999999999987 22222244555555667889999999999
Q ss_pred HHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC
Q 024125 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS 159 (272)
Q Consensus 80 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~ 159 (272)
+++++++++.+.+ +++|+||||||.....++.+.+.+++++.+++|+.+++.+++++++.|.++..++||++||..+..
T Consensus 81 ~~~~~~~~~~~~~-g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 159 (256)
T PRK12748 81 APNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG 159 (256)
T ss_pred HHHHHHHHHHHhC-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence 9999999999988 689999999998777788888999999999999999999999999999877778999999999888
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
+.++...|+++|+++++++++++.++.+.+|+|++++||+++|++... ..........+..+..+|+|+++.+.+
T Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~~~~ 234 (256)
T PRK12748 160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-----ELKHHLVPKFPQGRVGEPVDAARLIAF 234 (256)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-----hHHHhhhccCCCCCCcCHHHHHHHHHH
Confidence 888889999999999999999999999999999999999999987532 112223344566778899999999999
Q ss_pred HhcCCCCCccccEEEeCCCcC
Q 024125 240 LCLPAASYITGQIISVDGGFT 260 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~ 260 (272)
++++...+++|+++.+|||+.
T Consensus 235 l~~~~~~~~~g~~~~~d~g~~ 255 (256)
T PRK12748 235 LVSEEAKWITGQVIHSEGGFS 255 (256)
T ss_pred HhCcccccccCCEEEecCCcc
Confidence 999988999999999999964
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=284.06 Aligned_cols=239 Identities=22% Similarity=0.269 Sum_probs=209.3
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+..++++|++|||||++|||+++++.|+++|++|++++|+.++++++.+++.. +.++..+.+|++|.++++++++++.+
T Consensus 3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999999999988888777643 44677778999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.+ +++|++|||||+....++.+.+.++|++++++|+.+++++++.++|+|.+.+ |+||++||..+..+.++...|++|
T Consensus 82 ~~-g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~as 159 (296)
T PRK05872 82 RF-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCAS 159 (296)
T ss_pred Hc-CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHhhcCCCCCchHHHHH
Confidence 88 6899999999998788888999999999999999999999999999997754 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhc--CCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR--TPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
|+++++|+++++.|+.++||+|++++||+++|++........+........ .|.++..+|+|+++.+.++++....++
T Consensus 160 Kaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i 239 (296)
T PRK05872 160 KAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRV 239 (296)
T ss_pred HHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999999999999999999976643332222323222 366788999999999999999888887
Q ss_pred cccE
Q 024125 249 TGQI 252 (272)
Q Consensus 249 ~G~~ 252 (272)
+|..
T Consensus 240 ~~~~ 243 (296)
T PRK05872 240 YAPR 243 (296)
T ss_pred EchH
Confidence 7663
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=272.50 Aligned_cols=243 Identities=30% Similarity=0.437 Sum_probs=213.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||+|+||++++++|+++|+.|++.+|+.+++++..+.+ +.++.++.+|+++.++++++++++.+.+
T Consensus 2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999999999888777665443 3467788999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.+++++++++|+.+++++++++.+.+.+++.++||++||..+..+.+....|+++|+
T Consensus 79 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~ 157 (245)
T PRK12936 79 -EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKA 157 (245)
T ss_pred -CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHH
Confidence 6899999999987777777888999999999999999999999999887777789999999988888888999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
+++++++.++.++.+.++++++++||+++|++..... +...+......+..++.+|+|++..+.+++++...+++|++
T Consensus 158 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~ 235 (245)
T PRK12936 158 GMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN--DKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQT 235 (245)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC--hHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCE
Confidence 9999999999999999999999999999999875432 22222234456788889999999999999988888999999
Q ss_pred EEeCCCcCC
Q 024125 253 ISVDGGFTA 261 (272)
Q Consensus 253 i~~dgG~~~ 261 (272)
+.+|||+++
T Consensus 236 ~~~~~g~~~ 244 (245)
T PRK12936 236 IHVNGGMAM 244 (245)
T ss_pred EEECCCccc
Confidence 999999764
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=272.22 Aligned_cols=232 Identities=29% Similarity=0.426 Sum_probs=196.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+++|++|||||+||||++++++|+++|++|+++.| +.+..+++.+++ .+..+.+|++|.+++.+.+++ +
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~ 73 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S 73 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h
Confidence 477999999999999999999999999999988765 455555444332 245678999999988777754 3
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~~sK 171 (272)
+++|++|||||.....+..+.+.++|++++++|+.+++.+++.+++.|++ .++||++||..+. .+.++...|+++|
T Consensus 74 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sK 150 (237)
T PRK12742 74 -GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASK 150 (237)
T ss_pred -CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhH
Confidence 68999999999876667778899999999999999999999999999864 3799999998874 5677889999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.++.++||+||+|+||+++|++..... +..+......|.+++.+|+|+++.+.||+++...+++|+
T Consensus 151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~ 227 (237)
T PRK12742 151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGA 227 (237)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCC
Confidence 99999999999999999999999999999999864321 222333445678889999999999999999999999999
Q ss_pred EEEeCCCcC
Q 024125 252 IISVDGGFT 260 (272)
Q Consensus 252 ~i~~dgG~~ 260 (272)
++.+|||+.
T Consensus 228 ~~~~dgg~~ 236 (237)
T PRK12742 228 MHTIDGAFG 236 (237)
T ss_pred EEEeCCCcC
Confidence 999999975
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=273.39 Aligned_cols=241 Identities=32% Similarity=0.495 Sum_probs=211.6
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhCC--CeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
++||||++|||+++++.|+++|++|++++|+ .+.++++.+++.... ..+..+++|+++.++++++++++.+.+ +++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 80 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GGL 80 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CCc
Confidence 8999999999999999999999999999998 677777776665432 245567899999999999999999988 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|++|||||.....++.+.+.+++++++++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|++++.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 99999999877778888899999999999999999999999999998877899999999998888899999999999999
Q ss_pred HHHHHHHHHccCC--eeEEEeeCCcccChhhHhhhh---CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 177 LTRNLACEWAKDN--IRTNSVAPWYTKTSLVERLLE---NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 177 ~~~~la~el~~~~--i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++++.|+.+++ |+|++|+||+++|++...... .++.........+.+++.+|+|+++.+.+|+++...+++|+
T Consensus 161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~ 240 (251)
T PRK07069 161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA 240 (251)
T ss_pred HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence 9999999997765 999999999999999764322 23333444556777888999999999999999888999999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
.+.+|||++.
T Consensus 241 ~i~~~~g~~~ 250 (251)
T PRK07069 241 ELVIDGGICA 250 (251)
T ss_pred EEEECCCeec
Confidence 9999999753
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=273.95 Aligned_cols=247 Identities=29% Similarity=0.407 Sum_probs=217.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||+|+||+++++.|+++|++|++++|+++..++..+++.+.+.++.++++|+++.++++++++++.+.+
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 82 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF- 82 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 3678999999999999999999999999999999999998888888887767788889999999999999999998888
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL-KASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.+++++++++|+.+++.+++++++.| ++.+.++||++||..+..+.+....|+++|+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~ 162 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKH 162 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence 689999999998777777788899999999999999999999999999 7677789999999988888888899999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---------HHHHHH-HHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---------KEFVDK-VIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+++.+++.++.++.+.+|++++++||++.|++....... .+.... +....+.+.+.+|+|++++++++++
T Consensus 163 a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~ 242 (262)
T PRK13394 163 GLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS 242 (262)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcC
Confidence 999999999999999999999999999999986543221 111111 1234556788999999999999998
Q ss_pred CCCCCccccEEEeCCCcCC
Q 024125 243 PAASYITGQIISVDGGFTA 261 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~ 261 (272)
.....++|+++++|+|+.+
T Consensus 243 ~~~~~~~g~~~~~~~g~~~ 261 (262)
T PRK13394 243 FPSAALTGQSFVVSHGWFM 261 (262)
T ss_pred ccccCCcCCEEeeCCceec
Confidence 7778899999999999764
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=276.23 Aligned_cols=245 Identities=25% Similarity=0.415 Sum_probs=199.2
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC----hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN----EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.+++++|++|||||++|||++++++|+++|++|++++++ .+..++..+++...+.++.++++|+++++++++++++
T Consensus 3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence 346789999999999999999999999999996666543 3445555566655556788899999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEe-cCCCCCCCCCCChh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFI-SSVGGLSHVGSGSI 166 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~v-sS~~~~~~~~~~~~ 166 (272)
+.+.+ +++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|+|++. ++++++ ||..+ ...+....
T Consensus 83 ~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~-~~~~~~~~ 158 (257)
T PRK12744 83 AKAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLG-AFTPFYSA 158 (257)
T ss_pred HHHhh-CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhc-ccCCCccc
Confidence 99888 689999999998777788888999999999999999999999999998654 677776 44433 34567789
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH--HHHHHHhcCCCC--CCCCHHHHHHHHHHHhc
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE--FVDKVIARTPLQ--RVGEPEEVASLVAYLCL 242 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~e~a~~~~~l~~ 242 (272)
|++||+|++.|+++++.|+.++||+|++++||++.|++......... .........+.. ++.+|+|+++.+.||++
T Consensus 159 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 238 (257)
T PRK12744 159 YAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVT 238 (257)
T ss_pred chhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999998643211111 001111123333 67899999999999998
Q ss_pred CCCCCccccEEEeCCCcCC
Q 024125 243 PAASYITGQIISVDGGFTA 261 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~ 261 (272)
+ ..+++|+++.+|||+.+
T Consensus 239 ~-~~~~~g~~~~~~gg~~~ 256 (257)
T PRK12744 239 D-GWWITGQTILINGGYTT 256 (257)
T ss_pred c-cceeecceEeecCCccC
Confidence 5 67899999999999765
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=275.22 Aligned_cols=247 Identities=32% Similarity=0.404 Sum_probs=217.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++++|++||||++|+||+++++.|+++|++|++++|+.+..+...+++... ..++.++.+|++++++++++++++.++
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 477899999999999999999999999999999999988877777666543 246788899999999999999999998
Q ss_pred cCCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||.. ...++.+.+.+++++++++|+.+++.+++++++.|.+++.++|+++||..+..+.++..+|+++
T Consensus 84 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 162 (276)
T PRK05875 84 H-GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVT 162 (276)
T ss_pred c-CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHH
Confidence 8 6899999999964 3356677889999999999999999999999999988777899999999988888888999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|++++.+++++++++...+|+++.|+||+++|++.......+..........|..++.+|+|+++++.+|++....+++|
T Consensus 163 K~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g 242 (276)
T PRK05875 163 KSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITG 242 (276)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCC
Confidence 99999999999999999999999999999999987654433333344455667888899999999999999988889999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
+++++|||+.+
T Consensus 243 ~~~~~~~g~~~ 253 (276)
T PRK05875 243 QVINVDGGHML 253 (276)
T ss_pred CEEEECCCeec
Confidence 99999999876
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-40 Score=273.13 Aligned_cols=233 Identities=30% Similarity=0.419 Sum_probs=199.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|+++|||+++|||++++++|+++|++|++++|+.... ...++..+.+|++++ ++++.+.+
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~ 65 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWV 65 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhh
Confidence 357899999999999999999999999999999999875431 123577889999887 33344444
Q ss_pred CCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||... ..++.+.+.+++++++++|+.++++++++++|.|.+++.++||++||..+..+.++...|+++|
T Consensus 66 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 144 (235)
T PRK06550 66 -PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASK 144 (235)
T ss_pred -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHH
Confidence 68999999999743 3567788999999999999999999999999999887779999999999988888889999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.++.++||+|++++||+++|++..................|.+++.+|+|+++.++||+++...+++|+
T Consensus 145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~ 224 (235)
T PRK06550 145 HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGT 224 (235)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCc
Confidence 99999999999999999999999999999999864332233334445567788999999999999999999888999999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
++.+|||+.+
T Consensus 225 ~~~~~gg~~~ 234 (235)
T PRK06550 225 IVPIDGGWTL 234 (235)
T ss_pred EEEECCceec
Confidence 9999999865
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=269.71 Aligned_cols=242 Identities=32% Similarity=0.522 Sum_probs=212.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++|++|||||+||||++++++|+++|++|+++. |+.+..++..+++...+.++.++++|+++.+++.++++++.+.+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF- 82 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999999999988765 45666667777776666788999999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|+||||||......+.+.+.+++++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++...|+++|++
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 162 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAG 162 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHH
Confidence 68999999999877777778899999999999999999999999999987777899999999888888889999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+++++++++.++.+.+|+++.++||+++|++..... ...........+.+.+..|+|+++.+.+++.. ..+++|+++
T Consensus 163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~-~~~~~g~~~ 239 (247)
T PRK12935 163 MLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP--EEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-GAYITGQQL 239 (247)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc--HHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-ccCccCCEE
Confidence 999999999999999999999999999999866542 22333344456677889999999999999975 458999999
Q ss_pred EeCCCcC
Q 024125 254 SVDGGFT 260 (272)
Q Consensus 254 ~~dgG~~ 260 (272)
++|||+.
T Consensus 240 ~i~~g~~ 246 (247)
T PRK12935 240 NINGGLY 246 (247)
T ss_pred EeCCCcc
Confidence 9999974
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=272.44 Aligned_cols=240 Identities=27% Similarity=0.359 Sum_probs=204.4
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++|||||++|||+++++.|+++|++|++++|+.++.++..+++... ...+.++.+|++|+++++++++++.+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999999999999998888887777432 3345667999999999999999999888
Q ss_pred CCCccEEEECCCCCC---CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC--------
Q 024125 93 NGKLNILVNNVGTNI---RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-------- 161 (272)
Q Consensus 93 ~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-------- 161 (272)
+++|++||||+... ..++.+.+.+++++.+++|+.+++.++++++|+|++++.++||++||..+..+.
T Consensus 82 -~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~ 160 (256)
T PRK09186 82 -GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT 160 (256)
T ss_pred -CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence 68999999997532 346778899999999999999999999999999998877899999997765321
Q ss_pred --CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 162 --GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 162 --~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
.....|++||+++++++++++.++.+++|+|+.++||.+.++... ..........+...+.+|+|+++++.+
T Consensus 161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~~~ 234 (256)
T PRK09186 161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE------AFLNAYKKCCNGKGMLDPDDICGTLVF 234 (256)
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH------HHHHHHHhcCCccCCCCHHHhhhhHhh
Confidence 122469999999999999999999999999999999999876522 222233344566778899999999999
Q ss_pred HhcCCCCCccccEEEeCCCcCC
Q 024125 240 LCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
++++...+++|+.+.+|||+++
T Consensus 235 l~~~~~~~~~g~~~~~~~g~~~ 256 (256)
T PRK09186 235 LLSDQSKYITGQNIIVDDGFSL 256 (256)
T ss_pred eeccccccccCceEEecCCccC
Confidence 9998889999999999999763
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=273.47 Aligned_cols=235 Identities=23% Similarity=0.265 Sum_probs=201.0
Q ss_pred EEEEeCCCChHHHHHHHHHHH----CCCEEEEeeCChHHHHHHHHHHHh--CCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 19 TALVTGGTRGIGQATVEELAG----LGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~----~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++|||||++|||++++++|++ +|++|++++|+.+.+++..+++.. .+.++.++.+|+++.++++++++++.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 799999999999999888888865 24578889999999999999999998876
Q ss_pred CCC----ccEEEECCCCCCC-C-CCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCeEEEecCCCCCCCCCC
Q 024125 93 NGK----LNILVNNVGTNIR-K-PTIE-YSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSHVGS 163 (272)
Q Consensus 93 ~~~----id~li~~ag~~~~-~-~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~ii~vsS~~~~~~~~~ 163 (272)
++ .|++|||||.... . ...+ .+.++|++++++|+.+++.+++.++|.|++++ .++||++||..+..+.++
T Consensus 82 -g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~ 160 (256)
T TIGR01500 82 -RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG 160 (256)
T ss_pred -ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence 33 3699999997432 2 2233 35789999999999999999999999998653 479999999999988899
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NKEFVDKVIARTPLQRVGEPEEVASLVAYL 240 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l 240 (272)
...|++||+|+++|+++++.|+.++||+|++++||+++|+|.....+ .++.........|.+++.+|+|+|+.++++
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l 240 (256)
T TIGR01500 161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSL 240 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999865432 233344455667888999999999999999
Q ss_pred hcCCCCCccccEEEe
Q 024125 241 CLPAASYITGQIISV 255 (272)
Q Consensus 241 ~~~~~~~~~G~~i~~ 255 (272)
++ ...++||+++..
T Consensus 241 ~~-~~~~~~G~~~~~ 254 (256)
T TIGR01500 241 LE-KDKFKSGAHVDY 254 (256)
T ss_pred Hh-cCCcCCcceeec
Confidence 96 578999998864
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=268.30 Aligned_cols=241 Identities=32% Similarity=0.475 Sum_probs=214.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
|++||||++++||++++++|+++|++|+++.| +.+..++..+++...+.++.++.+|++++++++++++++.+.+ +++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999998887 6666666666665555678889999999999999999999888 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|+||||||......+.+.+.+++++.+++|+.+++.++++++|.|++.+.++||++||..+..+.++...|+++|++++.
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~ 159 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG 159 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence 99999999877777788899999999999999999999999999988877899999999988888889999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeC
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVD 256 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~d 256 (272)
+++++++++.+.||+++.+.||+++|++..... +..........+..+..+|+++++.+.+|+++...+++|+++.+|
T Consensus 160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~ 237 (242)
T TIGR01829 160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMR--EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSIN 237 (242)
T ss_pred HHHHHHHHhhhhCeEEEEEeeCCCcCccccccc--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence 999999999999999999999999999875432 334444555678888999999999999999988889999999999
Q ss_pred CCcCC
Q 024125 257 GGFTA 261 (272)
Q Consensus 257 gG~~~ 261 (272)
||.++
T Consensus 238 gg~~~ 242 (242)
T TIGR01829 238 GGLYM 242 (242)
T ss_pred CCccC
Confidence 99764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=270.23 Aligned_cols=241 Identities=29% Similarity=0.365 Sum_probs=206.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||||++|||++++++|+++|++|+++ .|+.+..+...+++...+.++.++.+|+++.++++++++++.+.+ ++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 80 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GR 80 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CC
Confidence 4799999999999999999999999998775 467777777777776666678899999999999999999999888 68
Q ss_pred ccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCeEEEecCCCCCCCCCC-ChhhHHH
Q 024125 96 LNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGS-GSIYGAT 170 (272)
Q Consensus 96 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~ii~vsS~~~~~~~~~-~~~Y~~s 170 (272)
+|++|||||.... .++.+.+.+++++++++|+.+++.+++.+++.|..++ .++||++||..+..+.+. ...|++|
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s 160 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS 160 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence 9999999997543 4567788999999999999999999999999987653 478999999888766554 5689999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+++++|+++++.++.+.||+|+.++||+++|++.... ..++.........|.++..+|+++++.+++++++...+++|
T Consensus 161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G 239 (248)
T PRK06947 161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTG 239 (248)
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCC
Confidence 99999999999999999999999999999999986431 12233333445567788899999999999999988899999
Q ss_pred cEEEeCCCc
Q 024125 251 QIISVDGGF 259 (272)
Q Consensus 251 ~~i~~dgG~ 259 (272)
++|.+|||+
T Consensus 240 ~~~~~~gg~ 248 (248)
T PRK06947 240 ALLDVGGGR 248 (248)
T ss_pred ceEeeCCCC
Confidence 999999985
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=299.33 Aligned_cols=244 Identities=34% Similarity=0.529 Sum_probs=214.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++||||+++|||++++++|+++|++|++++|+.+++++..+++ +.++..+.+|++++++++++++++.+++
T Consensus 2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (520)
T PRK06484 2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF- 77 (520)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh-
Confidence 357899999999999999999999999999999999988887766555 3567788999999999999999999998
Q ss_pred CCccEEEECCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-eEEEecCCCCCCCCCCChhhHHH
Q 024125 94 GKLNILVNNVGTN--IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 94 ~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.| +||++||..+..+.+....|+++
T Consensus 78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~as 157 (520)
T PRK06484 78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSAS 157 (520)
T ss_pred CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHH
Confidence 6899999999973 23567788999999999999999999999999999876555 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH-HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE-FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
|+++++|+++++.|+.+++|+|++|+||+++|++......... .........+.++..+|+++++.+.+|+++...+++
T Consensus 158 Kaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~ 237 (520)
T PRK06484 158 KAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYIT 237 (520)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence 9999999999999999999999999999999999765432211 122334456777888999999999999999899999
Q ss_pred ccEEEeCCCcCC
Q 024125 250 GQIISVDGGFTA 261 (272)
Q Consensus 250 G~~i~~dgG~~~ 261 (272)
|+++.+|||+..
T Consensus 238 G~~~~~~gg~~~ 249 (520)
T PRK06484 238 GSTLVVDGGWTV 249 (520)
T ss_pred CceEEecCCeec
Confidence 999999999753
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=269.96 Aligned_cols=245 Identities=32% Similarity=0.436 Sum_probs=213.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+++......+..+.+|+++.++++++++++.+.+
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999888777777776555567788999999999999999999988
Q ss_pred CCCccEEEECCCCCC---CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 93 NGKLNILVNNVGTNI---RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 93 ~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+++|+||||||... ..++.+.+.+++++++++|+.++++++++++|+|.+.+.++||++||..+.. +...|++
T Consensus 82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~ 157 (250)
T PRK07774 82 -GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGL 157 (250)
T ss_pred -CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHH
Confidence 68999999999753 3456778899999999999999999999999999887778999999987753 4578999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
||++++.+++++++++...||+++.++||.++|++..... ............+...+.+|+|+++.+.+++++...+.+
T Consensus 158 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~ 236 (250)
T PRK07774 158 AKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT-PKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWIT 236 (250)
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcC
Confidence 9999999999999999999999999999999999876442 233444555667777788999999999999987667789
Q ss_pred ccEEEeCCCcCCC
Q 024125 250 GQIISVDGGFTAN 262 (272)
Q Consensus 250 G~~i~~dgG~~~~ 262 (272)
|+++++|+|.++.
T Consensus 237 g~~~~v~~g~~~~ 249 (250)
T PRK07774 237 GQIFNVDGGQIIR 249 (250)
T ss_pred CCEEEECCCeecc
Confidence 9999999998875
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=269.48 Aligned_cols=246 Identities=30% Similarity=0.429 Sum_probs=218.0
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+++|++||||++|+||++++++|+++|++|++++|+.+..++..+++...+.++..+.+|+++.++++++++++.+.+ +
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-G 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 568999999999999999999999999999999999998888888877666788899999999999999999999988 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|++|||||.....++.+.+.++++..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~ 160 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL 160 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence 89999999998777788888999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
+.+++.++.++.+.+|+|++++||++.|++....... ......+....+.+.+.+++|+++.+.+++.+.
T Consensus 161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 240 (258)
T PRK12429 161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA 240 (258)
T ss_pred HHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc
Confidence 9999999999999999999999999999987543221 011112223446678899999999999999877
Q ss_pred CCCccccEEEeCCCcCC
Q 024125 245 ASYITGQIISVDGGFTA 261 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~ 261 (272)
...++|+++++|||++.
T Consensus 241 ~~~~~g~~~~~~~g~~~ 257 (258)
T PRK12429 241 AKGVTGQAWVVDGGWTA 257 (258)
T ss_pred ccCccCCeEEeCCCEec
Confidence 78899999999999875
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=281.25 Aligned_cols=225 Identities=27% Similarity=0.327 Sum_probs=199.6
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 35789999999999999999999999999999999999999999988888777788889999999999999999999887
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||+....++.+.+.+++++++++|+.+++++++.++|+|++++.|+||++||..+..+.++...|++||+
T Consensus 83 -g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKa 161 (330)
T PRK06139 83 -GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKF 161 (330)
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHH
Confidence 6899999999998888899999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccC-CeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 173 AMNQLTRNLACEWAKD-NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 173 a~~~~~~~la~el~~~-~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
++.+|+++++.|+.+. +|+|++|+||+++|++........ . ....+.....+|+++|+.+++++..
T Consensus 162 al~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~---~--~~~~~~~~~~~pe~vA~~il~~~~~ 228 (330)
T PRK06139 162 GLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT---G--RRLTPPPPVYDPRRVAKAVVRLADR 228 (330)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc---c--ccccCCCCCCCHHHHHHHHHHHHhC
Confidence 9999999999999875 899999999999999864321100 0 0112334467999999999988853
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=267.68 Aligned_cols=222 Identities=18% Similarity=0.223 Sum_probs=192.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++..+.+|+++.++++++++++.+++
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46889999999999999999999999999999999999999988888887766678888999999999999999999998
Q ss_pred CCCccEEEECCCC-CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHH
Q 024125 93 NGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 93 ~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
++++|++|||||. ....++.+.+.++|.+.+++|+.+++.+++.++|+|++++ .|+||++||..+. ++...|+++
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~as 157 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESS 157 (227)
T ss_pred CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHH
Confidence 3289999999985 3456778889999999999999999999999999998754 6899999997653 457889999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+.+|+++++.|+.++||+||+|+||+++|+... .++..... .+|++.+..||++ +.|+||
T Consensus 158 Kaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~----~~~~~~~~-----------~~~~~~~~~~l~~--~~~~tg 220 (227)
T PRK08862 158 NALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL----DAVHWAEI-----------QDELIRNTEYIVA--NEYFSG 220 (227)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc----CHHHHHHH-----------HHHHHhheeEEEe--cccccc
Confidence 999999999999999999999999999999998421 11211111 1799999999996 779999
Q ss_pred cEEE
Q 024125 251 QIIS 254 (272)
Q Consensus 251 ~~i~ 254 (272)
+.+.
T Consensus 221 ~~~~ 224 (227)
T PRK08862 221 RVVE 224 (227)
T ss_pred eEEe
Confidence 9875
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=270.49 Aligned_cols=240 Identities=28% Similarity=0.437 Sum_probs=206.2
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++. ..++.+|+++.++++++++++.+.+ +
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~-~ 78 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY-G 78 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence 679999999999999999999999999999999999877666555442 1467899999999999999998888 6
Q ss_pred CccEEEECCCCCCC--CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC-CCChhhHHHH
Q 024125 95 KLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGSIYGATK 171 (272)
Q Consensus 95 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-~~~~~Y~~sK 171 (272)
++|++|||||...+ .++.+.+.+.+++.+++|+.+++.+++.++|+|++++.++||++||..+..+. ++...|+++|
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sK 158 (255)
T PRK06057 79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASK 158 (255)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHH
Confidence 89999999997532 45667788999999999999999999999999988777899999998766654 4677899999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
++++++++.++.++.++||+|++++||+++|++...... .++...+.....|.+++.+|+|+++.+.+|+++...+++|
T Consensus 159 aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g 238 (255)
T PRK06057 159 GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITA 238 (255)
T ss_pred HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence 999999999999999999999999999999998765432 2222233334567788999999999999999999999999
Q ss_pred cEEEeCCCcC
Q 024125 251 QIISVDGGFT 260 (272)
Q Consensus 251 ~~i~~dgG~~ 260 (272)
+.+.+|||..
T Consensus 239 ~~~~~~~g~~ 248 (255)
T PRK06057 239 STFLVDGGIS 248 (255)
T ss_pred cEEEECCCee
Confidence 9999999964
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=267.72 Aligned_cols=214 Identities=28% Similarity=0.311 Sum_probs=182.4
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
+++||||++|||+++++.|+++|++|++++|+.+++++..+++ .+..+++|+++.++++++++++. +++|+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~----~~id~ 72 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFP----HHLDT 72 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHh----hcCcE
Confidence 5899999999999999999999999999999988877766554 24567899999999999988764 36999
Q ss_pred EEECCCCCCC------CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 99 LVNNVGTNIR------KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 99 li~~ag~~~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+|||||.... .++.+ +.++|++++++|+.+++.++++++|.|++ .|+||++||.. .+....|++||+
T Consensus 73 lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKa 145 (223)
T PRK05884 73 IVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKA 145 (223)
T ss_pred EEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHH
Confidence 9999985221 12333 47899999999999999999999999965 38999999976 345688999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
|+++|+++++.|+.++||+||+|+||+++|++.... ...|. .+|+|+++.+.||+++.+.+++|++
T Consensus 146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-----------~~~p~---~~~~~ia~~~~~l~s~~~~~v~G~~ 211 (223)
T PRK05884 146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL-----------SRTPP---PVAAEIARLALFLTTPAARHITGQT 211 (223)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc-----------cCCCC---CCHHHHHHHHHHHcCchhhccCCcE
Confidence 999999999999999999999999999999875321 11232 3899999999999999999999999
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
+.+|||++.|
T Consensus 212 i~vdgg~~~~ 221 (223)
T PRK05884 212 LHVSHGALAH 221 (223)
T ss_pred EEeCCCeecc
Confidence 9999999876
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=272.35 Aligned_cols=239 Identities=26% Similarity=0.294 Sum_probs=195.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHH----HHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSK-GFVVSGSVCDAASPDQR----EKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~----~~~~~~~~~~ 91 (272)
++++||||++|||++++++|+++|++|++++| +++.++++.+++... +.++..+.+|++|.+++ +++++++.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 68999999999999999999999999998765 466777777766532 44667789999999855 5566666667
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCH-----------HHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCeEEEecC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSA-----------EEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISS 154 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~ii~vsS 154 (272)
+ +++|+||||||...+.++.+.+. ++|++++++|+.+++.++++++|+|+.. ..++|++++|
T Consensus 82 ~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s 160 (267)
T TIGR02685 82 F-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD 160 (267)
T ss_pred c-CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence 7 68999999999865555544443 3589999999999999999999999643 2368999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCC-CCCCHHHH
Q 024125 155 VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ-RVGEPEEV 233 (272)
Q Consensus 155 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~ 233 (272)
..+..+.++..+|++||+|+++|+++++.|+.++||+|++|+||+++|+.... .+.........+.+ +..+|+|+
T Consensus 161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v 236 (267)
T TIGR02685 161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP----FEVQEDYRRKVPLGQREASAEQI 236 (267)
T ss_pred hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc----hhHHHHHHHhCCCCcCCCCHHHH
Confidence 99888888999999999999999999999999999999999999987653211 11122233345554 67899999
Q ss_pred HHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 234 ASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 234 a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
++.+++++++...+++|+++.+|||+++
T Consensus 237 a~~~~~l~~~~~~~~~G~~~~v~gg~~~ 264 (267)
T TIGR02685 237 ADVVIFLVSPKAKYITGTCIKVDGGLSL 264 (267)
T ss_pred HHHHHHHhCcccCCcccceEEECCceec
Confidence 9999999999899999999999999875
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=265.75 Aligned_cols=241 Identities=29% Similarity=0.332 Sum_probs=206.5
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+|++||||++++||++++++|+++|++|+++. |+++..++..+++...+.++.++.+|++|.++++++++++.+++ ++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CC
Confidence 57999999999999999999999999988876 45566666666666556678889999999999999999999988 68
Q ss_pred ccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCeEEEecCCCCCCCCCC-ChhhHHH
Q 024125 96 LNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGS-GSIYGAT 170 (272)
Q Consensus 96 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~ii~vsS~~~~~~~~~-~~~Y~~s 170 (272)
+|+||||||... ..++.+.+.++|++++++|+.+++.+++++++.|.++. .|+||++||..+..+.++ ...|+++
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s 160 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS 160 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence 999999999854 34677888999999999999999999999999997542 478999999988777665 3679999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+++++|+++++.++.++||+|++++||.+.|++..... .+..........|.++..+|+|+++.+.+++++...+++|
T Consensus 161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g 239 (248)
T PRK06123 161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTG 239 (248)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence 999999999999999999999999999999999864322 2334444555678888899999999999999988889999
Q ss_pred cEEEeCCCc
Q 024125 251 QIISVDGGF 259 (272)
Q Consensus 251 ~~i~~dgG~ 259 (272)
+++++|||.
T Consensus 240 ~~~~~~gg~ 248 (248)
T PRK06123 240 TFIDVSGGR 248 (248)
T ss_pred CEEeecCCC
Confidence 999999974
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=266.16 Aligned_cols=241 Identities=30% Similarity=0.407 Sum_probs=208.9
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++++|+++|||++++||+++++.|+++|++|++++|+.++.+++.+.. .+.++.+|+++.++++++++.
T Consensus 4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~---- 74 (245)
T PRK07060 4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA---- 74 (245)
T ss_pred ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----
Confidence 35688999999999999999999999999999999999988776655443 245678999999988887765
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||.....+..+.+.+++++.+++|+.+++.+++++.+.+++++ .++||++||..+..+.++...|+++
T Consensus 75 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s 153 (245)
T PRK07060 75 A-GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCAS 153 (245)
T ss_pred h-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHH
Confidence 3 6899999999987777777788999999999999999999999999987654 4799999999988888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|++++.++++++.++.+.+|++++++||++.|++.......+..........+.+++.+|+|+++.+.+++++...+++|
T Consensus 154 K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G 233 (245)
T PRK07060 154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSG 233 (245)
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccC
Confidence 99999999999999998999999999999999986543334444444555678888999999999999999988889999
Q ss_pred cEEEeCCCcCCC
Q 024125 251 QIISVDGGFTAN 262 (272)
Q Consensus 251 ~~i~~dgG~~~~ 262 (272)
+.+.+|||++++
T Consensus 234 ~~~~~~~g~~~~ 245 (245)
T PRK07060 234 VSLPVDGGYTAR 245 (245)
T ss_pred cEEeECCCccCC
Confidence 999999998763
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=266.08 Aligned_cols=244 Identities=29% Similarity=0.292 Sum_probs=208.1
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.+..++|++|||||++|||++++++|+++|++|+++.+ +.+..+...+++...+.++.++.+|++|.++++++++++.+
T Consensus 4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 83 (258)
T PRK09134 4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA 83 (258)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 33467899999999999999999999999999988765 45666667777766667788899999999999999999988
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.+ +++|+||||||.....++.+.+.+++++++++|+.+++.+++++.++|.+...++||+++|..+..+.+....|++|
T Consensus 84 ~~-~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~s 162 (258)
T PRK09134 84 AL-GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLS 162 (258)
T ss_pred Hc-CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHH
Confidence 88 68999999999877777888899999999999999999999999999988777899999998777777777899999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|++++.++++++.++.+. |+|++++||++.|+.... ...........+.++..+|+|+++.++++++ ..+++|
T Consensus 163 K~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~--~~~~~g 235 (258)
T PRK09134 163 KAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS----PEDFARQHAATPLGRGSTPEEIAAAVRYLLD--APSVTG 235 (258)
T ss_pred HHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC----hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhc--CCCcCC
Confidence 999999999999999775 999999999998865321 1222233445677788899999999999996 467899
Q ss_pred cEEEeCCCcCCCC
Q 024125 251 QIISVDGGFTANG 263 (272)
Q Consensus 251 ~~i~~dgG~~~~~ 263 (272)
+.+.+|||.++.+
T Consensus 236 ~~~~i~gg~~~~~ 248 (258)
T PRK09134 236 QMIAVDGGQHLAW 248 (258)
T ss_pred CEEEECCCeeccc
Confidence 9999999987654
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=266.24 Aligned_cols=246 Identities=33% Similarity=0.498 Sum_probs=213.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|+++||||+||||++++++|+++|++|+++ .|+.+..++..+.+...+.++.++++|++|.+++.++++++.+++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999998774 788877777777766555678889999999999999999998876
Q ss_pred C-----CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 93 N-----GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 93 ~-----~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+ +++|++|||||......+.+.+.+.|++++++|+.+++++++.++|+|.+. +++|++||..+..+.++...|
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~~~~~Y 160 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFTGSIAY 160 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCCCCcch
Confidence 2 369999999998777777888999999999999999999999999998654 699999999988888899999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+++|++++.++++++.++.+.+++|++++||+++|++.......+..........+.++..+++|+++.+.+++++...+
T Consensus 161 ~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 240 (254)
T PRK12746 161 GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRW 240 (254)
T ss_pred HhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCC
Confidence 99999999999999999999999999999999999997765444443333334456678889999999999999877788
Q ss_pred ccccEEEeCCCcCC
Q 024125 248 ITGQIISVDGGFTA 261 (272)
Q Consensus 248 ~~G~~i~~dgG~~~ 261 (272)
++|+.++++||.++
T Consensus 241 ~~g~~~~i~~~~~~ 254 (254)
T PRK12746 241 VTGQIIDVSGGFCL 254 (254)
T ss_pred cCCCEEEeCCCccC
Confidence 99999999999764
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=266.76 Aligned_cols=246 Identities=28% Similarity=0.410 Sum_probs=215.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+++|+++|||++++||++++++|+++|++ |++++|+.+..+...+++...+.++.++.+|++++++++++++.+.+++
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999998 9999999887777777776666678888999999999999999999888
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||.....++.+.+.+++++++++|+.++++++++++|.|.+++ .+++|++||..+..+.+....|+++|
T Consensus 83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK 161 (260)
T PRK06198 83 -GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASK 161 (260)
T ss_pred -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHH
Confidence 6899999999987777777889999999999999999999999999997654 48999999999888888889999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-----NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
+++++++++++.++...+|+|+.++||++.|++...... ...+........+.++..+|+|+++.+.+++++...
T Consensus 162 ~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~ 241 (260)
T PRK06198 162 GALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESG 241 (260)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhC
Confidence 999999999999999999999999999999987532111 122333344456777888999999999999998888
Q ss_pred CccccEEEeCCCcC
Q 024125 247 YITGQIISVDGGFT 260 (272)
Q Consensus 247 ~~~G~~i~~dgG~~ 260 (272)
+++|+.|.+|+|.+
T Consensus 242 ~~~G~~~~~~~~~~ 255 (260)
T PRK06198 242 LMTGSVIDFDQSVW 255 (260)
T ss_pred CccCceEeECCccc
Confidence 99999999999975
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=264.55 Aligned_cols=242 Identities=27% Similarity=0.428 Sum_probs=210.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++++++||||+++|||+++++.|+++|++|++++|+.+++++..+++...+.++..+++|+++.++++++++.+.+.+
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF- 80 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999999988888888777666788889999999999999999998887
Q ss_pred CCccEEEECCCCCCCCCC---------CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCCCCCC
Q 024125 94 GKLNILVNNVGTNIRKPT---------IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGS 163 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~~~~~ 163 (272)
+++|+||||||....... .+.+.++++.++++|+.+++.+.+.+.|.|.+. ..++|+++||... .+.++
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~~~~~ 159 (253)
T PRK08217 81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-AGNMG 159 (253)
T ss_pred CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-cCCCC
Confidence 689999999997443222 567889999999999999999999999999765 4578999988754 56677
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
...|+++|+|+++++++++.++.++||++++++||+++|++..... +..........|.+.+.+|+|+++.+.++++
T Consensus 160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~- 236 (253)
T PRK08217 160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK--PEALERLEKMIPVGRLGEPEEIAHTVRFIIE- 236 (253)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC--HHHHHHHHhcCCcCCCcCHHHHHHHHHHHHc-
Confidence 8999999999999999999999999999999999999999875542 3444555566788888999999999999995
Q ss_pred CCCCccccEEEeCCCcCC
Q 024125 244 AASYITGQIISVDGGFTA 261 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~ 261 (272)
..+++|+++++|||+.+
T Consensus 237 -~~~~~g~~~~~~gg~~~ 253 (253)
T PRK08217 237 -NDYVTGRVLEIDGGLRL 253 (253)
T ss_pred -CCCcCCcEEEeCCCccC
Confidence 46889999999999864
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=265.87 Aligned_cols=224 Identities=20% Similarity=0.263 Sum_probs=193.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCC-eEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
|++|||||++|||++++++|+ +|++|++++|+.++++++.+++++.+. .+.++++|++|.++++++++++.+.+ +++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCC
Confidence 579999999999999999999 599999999999999998888876543 47788999999999999999999888 789
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
|++|||||.....+..+.+.+++++++++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++...|++||+|++
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~ 158 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD 158 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence 9999999986555556677788899999999999999999999998764 589999999999988889999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEe
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~ 255 (272)
+|+++++.|+.++||+|++++||+++|++..... +.....+|+|+|+.++++++.... ++.+.+
T Consensus 159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~-------------~~~~~~~pe~~a~~~~~~~~~~~~---~~~~~~ 222 (246)
T PRK05599 159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK-------------PAPMSVYPRDVAAAVVSAITSSKR---STTLWI 222 (246)
T ss_pred HHHHHHHHHhcCCCceEEEecCCcccchhhcCCC-------------CCCCCCCHHHHHHHHHHHHhcCCC---CceEEe
Confidence 9999999999999999999999999999864321 112235899999999999975432 556777
Q ss_pred CCCc
Q 024125 256 DGGF 259 (272)
Q Consensus 256 dgG~ 259 (272)
+++.
T Consensus 223 ~~~~ 226 (246)
T PRK05599 223 PGRL 226 (246)
T ss_pred CccH
Confidence 7664
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=261.81 Aligned_cols=245 Identities=37% Similarity=0.522 Sum_probs=217.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++++|++|||||+++||++++++|+++|++|+++ +|+.+..+...+.+...+.++.++.+|+++.++++++++.+.+.
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999998 99988888777777665667888999999999999999999888
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|++||++|.....++.+.+.+++++.+++|+.+++.+++.+.|.+.+++.+++|++||..+..+.+....|+.+|
T Consensus 81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK 159 (247)
T PRK05565 81 F-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK 159 (247)
T ss_pred h-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence 8 689999999998766677788999999999999999999999999999888778999999999888888889999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.++...|+++++++||+++|++.+...+ ..........+.++..+|+++++.+.++++.....++|+
T Consensus 160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~ 237 (247)
T PRK05565 160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE--EDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQ 237 (247)
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCc
Confidence 999999999999999999999999999999998765432 122222234566778899999999999999889999999
Q ss_pred EEEeCCCcC
Q 024125 252 IISVDGGFT 260 (272)
Q Consensus 252 ~i~~dgG~~ 260 (272)
++.+|+|++
T Consensus 238 ~~~~~~~~~ 246 (247)
T PRK05565 238 IITVDGGWT 246 (247)
T ss_pred EEEecCCcc
Confidence 999999975
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=260.33 Aligned_cols=247 Identities=34% Similarity=0.499 Sum_probs=215.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++++|++||||++|+||++++++|+++|++|+++.|+.+ ..+...+++...+.++..+.+|+++.+++.++++++.+.
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999987777654 455556666555667888999999999999999999988
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|++|||||.....+..+.+.+++++.+++|+.+++.+++.+.+++.+.+.++++++||..+..+.++...|+++|
T Consensus 81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk 159 (248)
T PRK05557 81 F-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASK 159 (248)
T ss_pred c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHH
Confidence 8 689999999998777777788899999999999999999999999999887778999999998888888899999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.+++.++.++...++++++++||+++|++.... .+..........+.+.+.+++|+++.+.+++.+...+++|+
T Consensus 160 ~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~ 237 (248)
T PRK05557 160 AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQ 237 (248)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcccc
Confidence 9999999999999999999999999999999886544 22334444556677788899999999999998878899999
Q ss_pred EEEeCCCcCCC
Q 024125 252 IISVDGGFTAN 262 (272)
Q Consensus 252 ~i~~dgG~~~~ 262 (272)
.+++|||++|+
T Consensus 238 ~~~i~~~~~~~ 248 (248)
T PRK05557 238 TLHVNGGMVMG 248 (248)
T ss_pred EEEecCCccCC
Confidence 99999999875
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=263.48 Aligned_cols=243 Identities=30% Similarity=0.429 Sum_probs=207.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||||+++||++++++|+++|++|++++|+. +..++..+.++..+.++.++.+|+++.+++.++++++.+.+ ++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence 48999999999999999999999999999998864 44555666665555678899999999999999999999988 68
Q ss_pred ccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC------CCeEEEecCCCCCCCCCCChhh
Q 024125 96 LNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG------VGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 96 id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+|++|||||... ..++.+.+.+++++.+++|+.+++.+++++.+.|.++. .++|+++||..+..+.++...|
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 160 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEY 160 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCccc
Confidence 999999999743 34567788899999999999999999999999998654 3579999999988888888999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHH-hcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVI-ARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
+++|++++.++++++.++.++||++++++||++.|++...... ....... ...|..++.+|+|+++.+.+++++...
T Consensus 161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~ 238 (256)
T PRK12745 161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA--KYDALIAKGLVPMPRWGEPEDVARAVAALASGDLP 238 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch--hHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCccc
Confidence 9999999999999999999999999999999999988654321 1111111 235677888999999999999998888
Q ss_pred CccccEEEeCCCcCCC
Q 024125 247 YITGQIISVDGGFTAN 262 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~ 262 (272)
+.+|+.+++|||.+++
T Consensus 239 ~~~G~~~~i~gg~~~~ 254 (256)
T PRK12745 239 YSTGQAIHVDGGLSIP 254 (256)
T ss_pred ccCCCEEEECCCeecc
Confidence 9999999999998764
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=262.64 Aligned_cols=246 Identities=28% Similarity=0.371 Sum_probs=212.2
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+. +.++..+.+|+++.+++.++++++.+++ +++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAER-GPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 5899999999999999999999999999999999988877776653 3467888999999999999999999988 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.+.+++.++||++||..+... .+...|+.+|++++.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~ 157 (257)
T PRK07074 79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH 157 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence 9999999987667777889999999999999999999999999998887789999999766543 456789999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEe
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~ 255 (272)
+++++++++.++||+|++++||+++|++...... .++.........+...+..++|+++++.+|+++...+++|+++.+
T Consensus 158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~ 237 (257)
T PRK07074 158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPV 237 (257)
T ss_pred HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEe
Confidence 9999999999999999999999999998653221 223333333456778899999999999999998888999999999
Q ss_pred CCCcCCCCCCC
Q 024125 256 DGGFTANGFNP 266 (272)
Q Consensus 256 dgG~~~~~~~~ 266 (272)
|||+..+.-+.
T Consensus 238 ~~g~~~~~~~~ 248 (257)
T PRK07074 238 DGGLTAGNREM 248 (257)
T ss_pred CCCcCcCChhh
Confidence 99987764443
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=268.85 Aligned_cols=228 Identities=25% Similarity=0.363 Sum_probs=196.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 81 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL- 81 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999999998888888887666678889999999999999999999988
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||+...+++.+.+.++|++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+
T Consensus 82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 161 (275)
T PRK05876 82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKY 161 (275)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHH
Confidence 6899999999998778888999999999999999999999999999998765 589999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH--HHH-----HHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK--EFV-----DKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
++++|+++++.|+.++||+|++++||+++|++........ ... ...........+.+|+|+|+.++..+.
T Consensus 162 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~ 238 (275)
T PRK05876 162 GVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAIL 238 (275)
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999864321100 000 000000112345799999999987774
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=259.11 Aligned_cols=246 Identities=34% Similarity=0.455 Sum_probs=218.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||+|+||++++++|+++|++|++++|+.++..+..+++...+.++.++.+|++|.++++++++++.+++
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 81 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF- 81 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 3678999999999999999999999999999999999888888877777666678889999999999999999999988
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~~sK~ 172 (272)
+++|++|||+|.....++.+.+.+++++.++.|+.+++.+++.++|.|.+++.+++|++||..+. .+.++...|+++|+
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~ 161 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKA 161 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHH
Confidence 68999999999877777778899999999999999999999999999988777899999999887 77788899999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
+++.+++.++.++.+.|++++.++||.+.|+....... ...........|.+.+.+++|+++.+.++++....+++|+.
T Consensus 162 a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~ 240 (251)
T PRK12826 162 GLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD-AQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQT 240 (251)
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcE
Confidence 99999999999999999999999999999998654432 11123344556777889999999999999987777899999
Q ss_pred EEeCCCcCC
Q 024125 253 ISVDGGFTA 261 (272)
Q Consensus 253 i~~dgG~~~ 261 (272)
+.+|||.++
T Consensus 241 ~~~~~g~~~ 249 (251)
T PRK12826 241 LPVDGGATL 249 (251)
T ss_pred EEECCCccC
Confidence 999999875
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=256.47 Aligned_cols=234 Identities=28% Similarity=0.358 Sum_probs=198.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh--CCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
|++.||++++||+.||||++++++|+++|..+.++..+.|..+... ++++ ....+.+++||+++..++++.++++..
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 5789999999999999999999999999998777777766655444 4443 357899999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCeEEEecCCCCCCCCCCChhh
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
.+ +++|++||+||+ .+..+|++++++|+.|.++-+...+|+|.++. +|.|||+||..+..|.+..+.|
T Consensus 80 ~f-g~iDIlINgAGi--------~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY 150 (261)
T KOG4169|consen 80 TF-GTIDILINGAGI--------LDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY 150 (261)
T ss_pred Hh-CceEEEEccccc--------ccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence 99 799999999998 35678999999999999999999999998763 4799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH--ccCCeeEEEeeCCcccChhhHhhhh---CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 168 GATKAAMNQLTRNLACEW--AKDNIRTNSVAPWYTKTSLVERLLE---NKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el--~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
++||+++.+|+||++... ...||+++++|||+++|++...+.. ..+.-+.+.+....-...+|.+++..++.++.
T Consensus 151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE 230 (261)
T KOG4169|consen 151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIE 230 (261)
T ss_pred hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHh
Confidence 999999999999998864 5569999999999999999887733 22322233333333335689999999998885
Q ss_pred CCCCCccccEEEeCCCc
Q 024125 243 PAASYITGQIISVDGGF 259 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~ 259 (272)
. ..||+.+.+|+|.
T Consensus 231 ~---~~NGaiw~v~~g~ 244 (261)
T KOG4169|consen 231 Y---PKNGAIWKVDSGS 244 (261)
T ss_pred h---ccCCcEEEEecCc
Confidence 4 5789999999996
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=271.57 Aligned_cols=226 Identities=21% Similarity=0.288 Sum_probs=200.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
..+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++..+.+|++|.++++++++++.+++
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 35789999999999999999999999999999999999999998888888777788899999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.+++++++++|+.++++++++++|+|++++.++||++||..+..+.+....|+++|+
T Consensus 84 -g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~ 162 (334)
T PRK07109 84 -GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKH 162 (334)
T ss_pred -CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHH
Confidence 6899999999987778888999999999999999999999999999999887799999999999999899999999999
Q ss_pred HHHHHHHHHHHHHcc--CCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 173 AMNQLTRNLACEWAK--DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 173 a~~~~~~~la~el~~--~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
++++|+++++.|+.. .+|+|++|+||.++|++...... ... ....+.....+|+|+|+.++++++..
T Consensus 163 a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~---~~~--~~~~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 163 AIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS---RLP--VEPQPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh---hcc--ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 999999999999975 47999999999999998653211 111 11234556789999999999999743
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=259.50 Aligned_cols=241 Identities=35% Similarity=0.511 Sum_probs=210.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC----ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR----NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++++|+++||||+|+||+++++.|+++|++|++++| +.+..++..+++...+.++.++.+|+++.++++++++++.
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 367899999999999999999999999999988655 4555566666666656688899999999999999999998
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHH-HHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+.+ +++|++|||||.....++.+.+.+++++.+++|+.+++.+++++. +.|++++.+++|++||..+..+.++...|+
T Consensus 83 ~~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~ 161 (249)
T PRK12827 83 EEF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYA 161 (249)
T ss_pred HHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhH
Confidence 887 689999999998777788888999999999999999999999999 677666678999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
.+|++++.++++++.++.+.++++++++||+++|++...... ..+.....+.....+++|+++.+.+++++...++
T Consensus 162 ~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~ 237 (249)
T PRK12827 162 ASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP----TEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYV 237 (249)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch----HHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCc
Confidence 999999999999999999999999999999999998654321 1334455677777899999999999998888999
Q ss_pred cccEEEeCCCc
Q 024125 249 TGQIISVDGGF 259 (272)
Q Consensus 249 ~G~~i~~dgG~ 259 (272)
+|+++.+|||.
T Consensus 238 ~g~~~~~~~g~ 248 (249)
T PRK12827 238 TGQVIPVDGGF 248 (249)
T ss_pred cCcEEEeCCCC
Confidence 99999999985
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=258.97 Aligned_cols=232 Identities=22% Similarity=0.273 Sum_probs=200.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCC--HHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAAS--PDQREKLIQEVGS 90 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~--~~~~~~~~~~~~~ 90 (272)
++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++... ...+..+.+|+++ .++++++++++.+
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999888887777544 2356677899975 5788999999988
Q ss_pred HcCCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 91 KFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 91 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
.+++++|++|||||.. ...++.+.+.+++++.+++|+.+++.++++++|.|.+.+.++++++||..+..+.++...|++
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 162 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGA 162 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHH
Confidence 8745799999999974 335778889999999999999999999999999998877789999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHccC-CeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 170 TKAAMNQLTRNLACEWAKD-NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~-~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
||++++.|+++++.|+.++ +|+|+++.||+++|++......... .....+++|++..+.|++++.+.++
T Consensus 163 sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (239)
T PRK08703 163 SKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAFVWWASAESKGR 232 (239)
T ss_pred hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHHHHHHHHHHHhCccccCc
Confidence 9999999999999999887 6999999999999998654322110 1234589999999999999999999
Q ss_pred cccEEEe
Q 024125 249 TGQIISV 255 (272)
Q Consensus 249 ~G~~i~~ 255 (272)
||++|.+
T Consensus 233 ~g~~~~~ 239 (239)
T PRK08703 233 SGEIVYL 239 (239)
T ss_pred CCeEeeC
Confidence 9999864
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=271.34 Aligned_cols=238 Identities=18% Similarity=0.201 Sum_probs=196.1
Q ss_pred EEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024125 21 LVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (272)
Q Consensus 21 lItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 99 (272)
|||||++|||++++++|+++| ++|++++|+.++.++..+++...+.++.++.+|++|.++++++++++.+.+ +++|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence 699999999999999999999 999999999988887777775445578888999999999999999998877 689999
Q ss_pred EECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCeEEEecCCCCCCC----------------
Q 024125 100 VNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSH---------------- 160 (272)
Q Consensus 100 i~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~ii~vsS~~~~~~---------------- 160 (272)
|||||+... .++.+.+.++|++++++|+.|++.+++.++|.|++++ .|+||++||..+..+
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~ 159 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR 159 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence 999998533 3566788999999999999999999999999998775 589999999876421
Q ss_pred -------------------CCCChhhHHHHHHHHHHHHHHHHHHcc-CCeeEEEeeCCcc-cChhhHhhhhCHHHHHHHH
Q 024125 161 -------------------VGSGSIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYT-KTSLVERLLENKEFVDKVI 219 (272)
Q Consensus 161 -------------------~~~~~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~ 219 (272)
+.+..+|++||+|...+++.+++++.+ .||+|++++||+| .|+|...............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~ 239 (308)
T PLN00015 160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPF 239 (308)
T ss_pred hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHH
Confidence 124577999999999999999999975 6999999999999 7888654321111111111
Q ss_pred hcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 220 ARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 220 ~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
...+.++..+|++.|+.+++++++...+.+|+++..||+.
T Consensus 240 ~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~ 279 (308)
T PLN00015 240 QKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS 279 (308)
T ss_pred HHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence 2234556789999999999999987778999999998863
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=290.89 Aligned_cols=253 Identities=27% Similarity=0.328 Sum_probs=217.4
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
++..+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++... ...+..+.+|++|.++++++++++
T Consensus 408 ~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i 487 (676)
T TIGR02632 408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV 487 (676)
T ss_pred CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 446688999999999999999999999999999999999998887777766532 235778899999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhh
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
.+.+ +++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+++.|++++ .++||++||..+..+.++...|
T Consensus 488 ~~~~-g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY 566 (676)
T TIGR02632 488 ALAY-GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAY 566 (676)
T ss_pred HHhc-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHH
Confidence 9998 6899999999987777888889999999999999999999999999998765 4799999999988888899999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccC--hhhHh-hh---------hCHHHHHHHHhcCCCCCCCCHHHHHH
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT--SLVER-LL---------ENKEFVDKVIARTPLQRVGEPEEVAS 235 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t--~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~e~a~ 235 (272)
++||+++++++++++.++.++||+||+|+||.+.| .+... +. ...+....+....+.++..+|+|+++
T Consensus 567 ~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~ 646 (676)
T TIGR02632 567 SAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAE 646 (676)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999864 23211 00 01122233455678889999999999
Q ss_pred HHHHHhcCCCCCccccEEEeCCCcCCCCC
Q 024125 236 LVAYLCLPAASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 236 ~~~~l~~~~~~~~~G~~i~~dgG~~~~~~ 264 (272)
++.+|+++...++||+++++|||.+...+
T Consensus 647 av~~L~s~~~~~~TG~~i~vDGG~~~~~~ 675 (676)
T TIGR02632 647 AVFFLASSKSEKTTGCIITVDGGVPAAFL 675 (676)
T ss_pred HHHHHhCCcccCCcCcEEEECCCchhccc
Confidence 99999988888999999999999876543
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=254.05 Aligned_cols=245 Identities=37% Similarity=0.514 Sum_probs=217.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++.+|++||||++|+||++++++|+++|++|++++|+.++.+....++...+.++.++.+|+++++++.++++++.+.+
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF- 80 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 5678999999999999999999999999999999999988887777777667788889999999999999999998888
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++||++|.....+..+.+.+++++.++.|+.+++++++++.|+|.+.+.++||++||..+..+..+...|+.+|++
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~ 160 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAG 160 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHH
Confidence 68999999999877777778889999999999999999999999999988877899999999888888888999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
++.+++++++++.+.++++++++||.+.+++..... ...........+.+.+.+++|+++.+.+++++...+++|+.+
T Consensus 161 ~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~ 238 (246)
T PRK05653 161 VIGFTKALALELASRGITVNAVAPGFIDTDMTEGLP--EEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVI 238 (246)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence 999999999999989999999999999998875422 222333344567788899999999999999888888999999
Q ss_pred EeCCCcCC
Q 024125 254 SVDGGFTA 261 (272)
Q Consensus 254 ~~dgG~~~ 261 (272)
.+|||.++
T Consensus 239 ~~~gg~~~ 246 (246)
T PRK05653 239 PVNGGMYM 246 (246)
T ss_pred EeCCCeeC
Confidence 99999864
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=255.54 Aligned_cols=231 Identities=31% Similarity=0.397 Sum_probs=199.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++|++|||||+++||++++++|+++|++|++++|+.+.. . ...++.+|+++.++++++++++.+.+ +
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~--~ 68 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F-----PGELFACDLADIEQTAATLAQINEIH--P 68 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CceEEEeeCCCHHHHHHHHHHHHHhC--C
Confidence 579999999999999999999999999999999986541 0 11357899999999999999998875 5
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|++|||||.....++.+.+.+++++.+++|+.+++.+.++++|.|++.+.++||++||... .+.+....|+++|++++
T Consensus 69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~Y~~sK~a~~ 147 (234)
T PRK07577 69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALDRTSYSAAKSALV 147 (234)
T ss_pred CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCCchHHHHHHHHHH
Confidence 89999999987777888889999999999999999999999999999887789999999863 45567889999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
+++++++.++.++||+|++++||+++|++.....+. +..........+.++..+|+|++..+++++++...+++|+.+.
T Consensus 148 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~ 227 (234)
T PRK07577 148 GCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLG 227 (234)
T ss_pred HHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEE
Confidence 999999999999999999999999999987543221 2222334455677788899999999999998878899999999
Q ss_pred eCCCcC
Q 024125 255 VDGGFT 260 (272)
Q Consensus 255 ~dgG~~ 260 (272)
+|||.+
T Consensus 228 ~~g~~~ 233 (234)
T PRK07577 228 VDGGGS 233 (234)
T ss_pred ecCCcc
Confidence 999865
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=253.85 Aligned_cols=244 Identities=34% Similarity=0.432 Sum_probs=205.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++++++++|||||+|+||++++++|+++|++|++..| +.+........+...+.++..+.+|+++.++++++++++.+.
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999877665 445555555556555567788899999999999999999998
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|++|||||.....++.+.+.+++++.+++|+.+++.+++++.|+|++. ++||++||..+..+.++...|+++|
T Consensus 82 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~sK 158 (252)
T PRK06077 82 Y-GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGLSIYGAMK 158 (252)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCCCCchHHHHHH
Confidence 8 689999999998777778888889999999999999999999999999764 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH-HHHHH-HhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE-FVDKV-IARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
++++++++++++++.+ +|+++.+.||+++|++......... ..... ....+.+++.+|+|+++.++++++ ....+
T Consensus 159 ~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~--~~~~~ 235 (252)
T PRK06077 159 AAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILK--IESIT 235 (252)
T ss_pred HHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhC--ccccC
Confidence 9999999999999988 8999999999999998654322100 01111 122345677999999999999995 34678
Q ss_pred ccEEEeCCCcCCC
Q 024125 250 GQIISVDGGFTAN 262 (272)
Q Consensus 250 G~~i~~dgG~~~~ 262 (272)
|+++++|+|+++.
T Consensus 236 g~~~~i~~g~~~~ 248 (252)
T PRK06077 236 GQVFVLDSGESLK 248 (252)
T ss_pred CCeEEecCCeecc
Confidence 9999999998775
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=277.17 Aligned_cols=241 Identities=27% Similarity=0.358 Sum_probs=205.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh--HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++|++||||+++|||++++++|+++|++|++++|.. +.+++..+++ + ...+.+|+++.++++++++.+.+.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~--~~~~~~Dv~~~~~~~~~~~~~~~~ 281 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---G--GTALALDITAPDAPARIAEHLAER 281 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHh
Confidence 46799999999999999999999999999999998843 3333333322 2 346789999999999999999988
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|++|||||+.....+.+.+.++|++++++|+.+++++.+++.+.+..++.++||++||..+..+.++...|+++|
T Consensus 282 ~-g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asK 360 (450)
T PRK08261 282 H-GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASK 360 (450)
T ss_pred C-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHH
Confidence 8 689999999998777788888999999999999999999999999976555668999999999888888999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+++++|+++++.++.++||++++|+||+++|++...+.. ...+......++.+...|+|+++++.||+++...++||+
T Consensus 361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~--~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~ 438 (450)
T PRK08261 361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF--ATREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGN 438 (450)
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch--hHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCC
Confidence 999999999999999999999999999999998765421 111222233566777899999999999999999999999
Q ss_pred EEEeCCCcCCC
Q 024125 252 IISVDGGFTAN 262 (272)
Q Consensus 252 ~i~~dgG~~~~ 262 (272)
+|.+|||..++
T Consensus 439 ~i~v~g~~~~~ 449 (450)
T PRK08261 439 VVRVCGQSLLG 449 (450)
T ss_pred EEEECCCcccC
Confidence 99999998764
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=258.95 Aligned_cols=221 Identities=25% Similarity=0.289 Sum_probs=190.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++|+++|||++||||++++++|+++|++|++++|+.++++++.+ . .+.++.+|++|.++++++++++.+.+ ++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~----~--~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~ 74 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS----L--GVHPLSLDVTDEASIKAAVDTIIAEE-GR 74 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----C--CCeEEEeeCCCHHHHHHHHHHHHHhc-CC
Confidence 57999999999999999999999999999999999877654432 1 36678999999999999999999888 68
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|++|||||....+++.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|++++
T Consensus 75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~ 154 (273)
T PRK06182 75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE 154 (273)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence 99999999998888888999999999999999999999999999999888899999999988877788889999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--------C--HH----HHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--------N--KE----FVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--------~--~~----~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
+|+++++.|+.+.||+|++++||+++|++...... . .+ ....+....+.++..+|+++|+.+++++
T Consensus 155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~ 234 (273)
T PRK06182 155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAV 234 (273)
T ss_pred HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999998532110 0 01 1123333446678889999999999999
Q ss_pred cC
Q 024125 242 LP 243 (272)
Q Consensus 242 ~~ 243 (272)
+.
T Consensus 235 ~~ 236 (273)
T PRK06182 235 TA 236 (273)
T ss_pred hC
Confidence 74
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=258.60 Aligned_cols=216 Identities=26% Similarity=0.332 Sum_probs=193.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||+||||++++++|+++|++|++++|+.+.+++..+++. ++.++.+|++++++++++++++.+.+
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc
Confidence 35788999999999999999999999999999999999988877766553 46778999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+
T Consensus 77 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 155 (273)
T PRK07825 77 -GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKH 155 (273)
T ss_pred -CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHH
Confidence 6899999999998778888889999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
++++|+++++.|+.+.||+|++|+||+++|++...... .....+.+|+|+++.++.++...
T Consensus 156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~~va~~~~~~l~~~ 216 (273)
T PRK07825 156 AVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-----------AKGFKNVEPEDVAAAIVGTVAKP 216 (273)
T ss_pred HHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-----------ccCCCCCCHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999998653311 11224579999999999998643
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=251.30 Aligned_cols=240 Identities=30% Similarity=0.365 Sum_probs=205.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
|++|||||+|+||++++++|+++|++|++ ..|+.+...+..+++...+.++..+++|++|.++++++++++.+.+ +++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence 68999999999999999999999999876 5677777777777776666678889999999999999999998887 689
Q ss_pred cEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCeEEEecCCCCCCCCCC-ChhhHHHH
Q 024125 97 NILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGS-GSIYGATK 171 (272)
Q Consensus 97 d~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~ii~vsS~~~~~~~~~-~~~Y~~sK 171 (272)
|++|||||.. ...++.+.+.++++.++++|+.+++.+++.+++.|.++. .++||++||..+..+.+. ...|+++|
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK 160 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK 160 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence 9999999974 455677889999999999999999999999999997653 478999999887776664 46899999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.++.++||++++++||++.|++.... ..+..........|..+..+|+|+++.+.+++++...+++|+
T Consensus 161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~ 239 (247)
T PRK09730 161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG-GEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGS 239 (247)
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCc
Confidence 9999999999999999999999999999999975432 123333444455677777899999999999999888899999
Q ss_pred EEEeCCCc
Q 024125 252 IISVDGGF 259 (272)
Q Consensus 252 ~i~~dgG~ 259 (272)
++.+|||.
T Consensus 240 ~~~~~g~~ 247 (247)
T PRK09730 240 FIDLAGGK 247 (247)
T ss_pred EEecCCCC
Confidence 99999974
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=257.93 Aligned_cols=243 Identities=21% Similarity=0.263 Sum_probs=206.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCC-eEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+. .+....+|+++.++++++++++.+.+ +++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence 5799999999999999999999999999999999888888777765443 34557899999999999999999888 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
|++|||+|.....++.+.+.+++++.+++|+.+++.++++++|.|.++ ..++||++||..+..+.++...|+++|++++
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 159 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR 159 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence 999999998777778889999999999999999999999999999764 3589999999998888888999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-----NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
+|+++++.|+.+++|+|++++||+++|++...... ..+....... ...++..+|+|+|+.+++++. ...++++
T Consensus 160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vA~~~~~~~~-~~~~~~~ 237 (272)
T PRK07832 160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-RFRGHAVTPEKAAEKILAGVE-KNRYLVY 237 (272)
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-hcccCCCCHHHHHHHHHHHHh-cCCeEEe
Confidence 99999999999999999999999999998765321 1111111111 124556899999999999995 5678899
Q ss_pred cEEEeCCCcCCCC
Q 024125 251 QIISVDGGFTANG 263 (272)
Q Consensus 251 ~~i~~dgG~~~~~ 263 (272)
+.+.+++|+.+..
T Consensus 238 ~~~~~~~~~~~~~ 250 (272)
T PRK07832 238 TSPDIRALYWFKR 250 (272)
T ss_pred cCcchHHHHHHHh
Confidence 9999999977663
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=249.90 Aligned_cols=244 Identities=34% Similarity=0.469 Sum_probs=211.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++||||++|+||++++++|+++|++|++++|+.+..+++.+++...+.++.++.+|+++.++++++++++.+.+ +++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence 4789999999999999999999999999999999988888887776666678889999999999999999999888 679
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|++||||+.....+..+.+.+++++++++|+.+++.++++++|.|++.+.+++|++||..+..+.+....|+.+|++++.
T Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~ 159 (255)
T TIGR01963 80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG 159 (255)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence 99999999877677777889999999999999999999999999988877899999999888888888999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH---------H-HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK---------E-FVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
++++++.++.+.+|+++.++||++.|++........ . .........+...+.+++|+++++++++++...
T Consensus 160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 239 (255)
T TIGR01963 160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAA 239 (255)
T ss_pred HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcccc
Confidence 999999999888999999999999999864432210 0 111122234556688999999999999987666
Q ss_pred CccccEEEeCCCcCC
Q 024125 247 YITGQIISVDGGFTA 261 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~ 261 (272)
.++|+++++|||+..
T Consensus 240 ~~~g~~~~~~~g~~~ 254 (255)
T TIGR01963 240 GITGQAIVLDGGWTA 254 (255)
T ss_pred CccceEEEEcCcccc
Confidence 789999999999864
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=256.22 Aligned_cols=225 Identities=24% Similarity=0.281 Sum_probs=197.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||+||||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|+++.++++++++++.+.+ +++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 579999999999999999999999999999999999888888887777788889999999999999999999888 6899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
++|||||......+.+.+.+++++++++|+.+++.+++.++|+|++++.++||++||..+..+.++...|+++|++++++
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL 159 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence 99999999877888889999999999999999999999999999888778999999999999999999999999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
+++++.|+.+.||++++++||+++|++........................+|+++|+.++..+..
T Consensus 160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~ 225 (270)
T PRK05650 160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK 225 (270)
T ss_pred HHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence 999999999999999999999999998765433222222222212223456899999999988864
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=257.99 Aligned_cols=223 Identities=25% Similarity=0.350 Sum_probs=192.1
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+.+.+.+++|++|||||+||||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|.++++++++++
T Consensus 32 ~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 111 (293)
T PRK05866 32 PRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADV 111 (293)
T ss_pred CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 34556788999999999999999999999999999999999999988888887766667888999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-CCCCCh
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEY--SAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGS 165 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-~~~~~~ 165 (272)
.+.+ +++|++|||||.....++.+. +.+++++++++|+.+++.++++++|+|++++.++||++||..+.. +.++..
T Consensus 112 ~~~~-g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~ 190 (293)
T PRK05866 112 EKRI-GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFS 190 (293)
T ss_pred HHHc-CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcc
Confidence 9988 689999999998766665543 467899999999999999999999999988889999999976654 357778
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
.|++||+|+++|+++++.|+.++||+|++++||+++|++...... .......+|+++|+.++..+..
T Consensus 191 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~-----------~~~~~~~~pe~vA~~~~~~~~~ 257 (293)
T PRK05866 191 VYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA-----------YDGLPALTADEAAEWMVTAART 257 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc-----------ccCCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999998643211 0111246899999999888853
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=255.52 Aligned_cols=223 Identities=22% Similarity=0.248 Sum_probs=188.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+|++|||||+||||++++++|+++|++|++++|+.+.++++.+ . .+..+.+|++|.++++++++++.+.++++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E--GLEAFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999999887665432 2 35678999999999999999998876568
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|++|||||....+++.+.+.+++++++++|+.|++.+++.++|+|++++.++||++||..+..+.++...|++||++++
T Consensus 77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 156 (277)
T PRK05993 77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIE 156 (277)
T ss_pred ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHH
Confidence 99999999998888888899999999999999999999999999999888899999999999989899999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-------------HHH---HHHHHh-cCCCCCCCCHHHHHHHHH
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-------------KEF---VDKVIA-RTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-------------~~~---~~~~~~-~~~~~~~~~~~e~a~~~~ 238 (272)
+|+++++.|+.++||+|++|+||+++|++....... ..+ ...... ..+.....+|+++++.++
T Consensus 157 ~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~ 236 (277)
T PRK05993 157 GLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLL 236 (277)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence 999999999999999999999999999987643211 000 001111 112223468999999999
Q ss_pred HHhcCC
Q 024125 239 YLCLPA 244 (272)
Q Consensus 239 ~l~~~~ 244 (272)
..+...
T Consensus 237 ~a~~~~ 242 (277)
T PRK05993 237 HALTAP 242 (277)
T ss_pred HHHcCC
Confidence 888643
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=255.97 Aligned_cols=237 Identities=24% Similarity=0.290 Sum_probs=199.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+|++|||||+||||++++++|+++|++|++++|+.+.++++.+.+ ...+..+++|+++.++++++++++.+.+ ++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 77 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHF-GR 77 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 4689999999999999999999999999999999988776655433 3457788999999999999999999888 68
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|++|||||....+++.+.+.+++++++++|+.+++.+++.++|+|++++.++||++||..+..+.+....|+++|++++
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~ 157 (275)
T PRK08263 78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE 157 (275)
T ss_pred CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence 99999999998888888999999999999999999999999999998887789999999999989899999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-------CHHHHHHHHhcCCCCCC-CCHHHHHHHHHHHhcCCCCC
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-------NKEFVDKVIARTPLQRV-GEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~e~a~~~~~l~~~~~~~ 247 (272)
.+++.++.++.+.||+|+.++||+++|++...... ............+.... .+|+|+++.+.+++... .
T Consensus 158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~--~ 235 (275)
T PRK08263 158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAE--N 235 (275)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCC--C
Confidence 99999999999999999999999999998732110 01122223333455566 89999999999999643 3
Q ss_pred ccccEEEeCCC
Q 024125 248 ITGQIISVDGG 258 (272)
Q Consensus 248 ~~G~~i~~dgG 258 (272)
..++++...++
T Consensus 236 ~~~~~~~~~~~ 246 (275)
T PRK08263 236 PPLRLFLGSGV 246 (275)
T ss_pred CCeEEEeCchH
Confidence 34666655444
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=247.54 Aligned_cols=244 Identities=37% Similarity=0.511 Sum_probs=210.2
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++|++|||||+|+||++++++|+++|++|++..|+ .+..+...+.+...+.++.++.+|+++.++++++++++.+.+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 82 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF- 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc-
Confidence 457899999999999999999999999998776554 444555555555556678889999999999999999998887
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.+++++.+++|+.+++++++.++|++++.+.+++|++||..+..+.++...|+.+|++
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~ 162 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAG 162 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHH
Confidence 68999999999877777778889999999999999999999999999988888899999999988888888999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
++++++.+++++.+.+++++.++||++.|++........ .... ....+.+++.+++|+++.+.++++....+.+|+++
T Consensus 163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~ 240 (249)
T PRK12825 163 LVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEA-REAK-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQVI 240 (249)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchh-HHhh-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEE
Confidence 999999999999989999999999999999976543221 1111 22456777889999999999999877888999999
Q ss_pred EeCCCcCC
Q 024125 254 SVDGGFTA 261 (272)
Q Consensus 254 ~~dgG~~~ 261 (272)
.++||..+
T Consensus 241 ~i~~g~~~ 248 (249)
T PRK12825 241 EVTGGVDV 248 (249)
T ss_pred EeCCCEee
Confidence 99999754
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=247.80 Aligned_cols=227 Identities=28% Similarity=0.439 Sum_probs=193.8
Q ss_pred EEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEE
Q 024125 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILV 100 (272)
Q Consensus 21 lItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li 100 (272)
|||||++|||++++++|+++|++|++++|+.++.++..++++. +.++.++.+|+++.++++++++++ +++|++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~id~li 74 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEA-----GPFDHVV 74 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhc-----CCCCEEE
Confidence 6999999999999999999999999999998887777666642 456788899999999998888764 6899999
Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 024125 101 NNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180 (272)
Q Consensus 101 ~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 180 (272)
||+|.....++.+.+.+++++++++|+.+++.+++ ++.+. +.++||++||..+..+.++...|+++|+++++++++
T Consensus 75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (230)
T PRK07041 75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG 150 (230)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence 99998777778888999999999999999999999 44553 458999999999998888999999999999999999
Q ss_pred HHHHHccCCeeEEEeeCCcccChhhHhhhhC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLEN--KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 181 la~el~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
++.|+.. |+|++++||+++|++....... ...........+.++..+|+|+++.+.+|++. .+.+|+++.+|||
T Consensus 151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gg 226 (230)
T PRK07041 151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDGG 226 (230)
T ss_pred HHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCCC
Confidence 9999975 9999999999999997643221 12233344556777888999999999999963 6899999999999
Q ss_pred cCC
Q 024125 259 FTA 261 (272)
Q Consensus 259 ~~~ 261 (272)
+.+
T Consensus 227 ~~~ 229 (230)
T PRK07041 227 HAI 229 (230)
T ss_pred eec
Confidence 765
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=249.37 Aligned_cols=244 Identities=35% Similarity=0.545 Sum_probs=210.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++|||||+|+||++++++|+++|++|++++|+++..+++.++.... ++..+.+|++++++++++++++.+.+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~- 84 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERF- 84 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 478999999999999999999999999999999999988777766555432 67788999999999999999999888
Q ss_pred CCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CeEEEecCCCCCCCCCCChhhHHHH
Q 024125 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 94 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|+||||||.. ....+.+.+.+++++++++|+.+++.+++++++.+.+.+. ++|+++||..+..+.+....|+.+|
T Consensus 85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K 164 (264)
T PRK12829 85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASK 164 (264)
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHH
Confidence 6899999999986 5556677889999999999999999999999999887665 7899999988888888888999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
++++.+++.++.++...+++++++.||++.|++....... ...........+..++.+++++++.+.++++
T Consensus 165 ~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~ 244 (264)
T PRK12829 165 WAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLAS 244 (264)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 9999999999999988899999999999999987654321 1122233444567778999999999999998
Q ss_pred CCCCCccccEEEeCCCcC
Q 024125 243 PAASYITGQIISVDGGFT 260 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~ 260 (272)
+...+.+|+.+++|||..
T Consensus 245 ~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 245 PAARYITGQAISVDGNVE 262 (264)
T ss_pred ccccCccCcEEEeCCCcc
Confidence 767788999999999953
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=248.27 Aligned_cols=236 Identities=30% Similarity=0.411 Sum_probs=206.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++||||++|+||++++++|+++|++|++++|+.++..+..+++... .+..+.+|++|.++++++++++.+.+
T Consensus 3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (239)
T PRK12828 3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQF 80 (239)
T ss_pred CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999999988777666655433 34567899999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+|||++|.....++.+.+.+++++.+++|+.+++.+++++.|+|++++.++||++||..+..+.++...|+++|+
T Consensus 81 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~ 159 (239)
T PRK12828 81 -GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKA 159 (239)
T ss_pred -CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHH
Confidence 6899999999987666777788999999999999999999999999998887899999999998888888899999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
+++.+++.++.++.+.+|+++.+.||++.|++....... .+...+.+++|+++.+.+++++...+++|+.
T Consensus 160 a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~----------~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~ 229 (239)
T PRK12828 160 GVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD----------ADFSRWVTPEQIAAVIAFLLSDEAQAITGAS 229 (239)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc----------hhhhcCCCHHHHHHHHHHHhCcccccccceE
Confidence 999999999999988999999999999999865432211 1123357899999999999987777899999
Q ss_pred EEeCCCcCC
Q 024125 253 ISVDGGFTA 261 (272)
Q Consensus 253 i~~dgG~~~ 261 (272)
+.+|||.++
T Consensus 230 ~~~~g~~~~ 238 (239)
T PRK12828 230 IPVDGGVAL 238 (239)
T ss_pred EEecCCEeC
Confidence 999999865
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=279.78 Aligned_cols=231 Identities=24% Similarity=0.287 Sum_probs=201.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
..++++++|||||+||||++++++|+++|++|++++|+.++++++.++++..+.++.++.+|++|.++++++++++.+.+
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999999888888887777788999999999999999999999888
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||+...+++.+.+.+++++++++|+.|+++++++++|.|.+++ .|+||++||.++..+.++...|++||
T Consensus 391 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 469 (582)
T PRK05855 391 -GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSK 469 (582)
T ss_pred -CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHH
Confidence 6899999999998778888899999999999999999999999999998875 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---H---HHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---K---EFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
+|+++|+++++.|+.++||+|++|+||+++|+|....... . +.........+.....+|+++|+.++++++..
T Consensus 470 aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~ 548 (582)
T PRK05855 470 AAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRN 548 (582)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999997653211 0 00111111222334568999999999999753
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=248.34 Aligned_cols=234 Identities=25% Similarity=0.325 Sum_probs=201.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++|++||||++++||++++++|+++|++|++++|+.++.+++.+.+...+.++.++.+|+++.+++.++++++.+++ ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 46899999999999999999999999999999999988888877776666678889999999999999999999988 68
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|++|||||.....++.+.+.+++++++++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|+++|++++
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~ 163 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA 163 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence 99999999987777778889999999999999999999999999998887799999999998888888999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc-EEE
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ-IIS 254 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~-~i~ 254 (272)
.++++++.++.+.||++++|.||+++|++....... .........+|+++++++.++++.....+.++ ++.
T Consensus 164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~--------~~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~~~~ 235 (241)
T PRK07454 164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ--------ADFDRSAMLSPEQVAQTILHLAQLPPSAVIEDLTLM 235 (241)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc--------cccccccCCCHHHHHHHHHHHHcCCccceeeeEEee
Confidence 999999999999999999999999999985421100 01122346799999999999998665544444 444
Q ss_pred eCCC
Q 024125 255 VDGG 258 (272)
Q Consensus 255 ~dgG 258 (272)
-++|
T Consensus 236 ~~~~ 239 (241)
T PRK07454 236 PSAG 239 (241)
T ss_pred cCCC
Confidence 4443
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=258.08 Aligned_cols=242 Identities=18% Similarity=0.174 Sum_probs=191.9
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++|++|||||++|||++++++|+++| ++|++++|+.++.++..+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 1 ~~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 79 (314)
T TIGR01289 1 QQKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG- 79 (314)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-
Confidence 357899999999999999999999999 999999999988888877776445678888999999999999999998887
Q ss_pred CCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCeEEEecCCCCCCC----------
Q 024125 94 GKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSH---------- 160 (272)
Q Consensus 94 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~ii~vsS~~~~~~---------- 160 (272)
+++|++|||||+..+ .+..+.+.++|++++++|+.+++.+++.++|+|++++ .++||++||..+...
T Consensus 80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~ 159 (314)
T TIGR01289 80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA 159 (314)
T ss_pred CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence 689999999997433 2334678899999999999999999999999998764 489999999876321
Q ss_pred -----------------------CCCChhhHHHHHHHHHHHHHHHHHHc-cCCeeEEEeeCCcc-cChhhHhhhhCHHHH
Q 024125 161 -----------------------VGSGSIYGATKAAMNQLTRNLACEWA-KDNIRTNSVAPWYT-KTSLVERLLENKEFV 215 (272)
Q Consensus 161 -----------------------~~~~~~Y~~sK~a~~~~~~~la~el~-~~~i~v~~v~PG~v-~t~~~~~~~~~~~~~ 215 (272)
..+..+|++||+|+..+++.+++++. ++||+|++|+||+| .|++...........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~ 239 (314)
T TIGR01289 160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTL 239 (314)
T ss_pred cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHH
Confidence 13457799999999999999999985 46899999999999 699865422111101
Q ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCC
Q 024125 216 DKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDG 257 (272)
Q Consensus 216 ~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dg 257 (272)
.............+|++.++.+++++.+.....+|.++..++
T Consensus 240 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~ 281 (314)
T TIGR01289 240 FPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN 281 (314)
T ss_pred HHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence 111111112345689999999999887544445788887544
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=250.27 Aligned_cols=214 Identities=22% Similarity=0.290 Sum_probs=187.2
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.+|+++.++++++++++.+++ +++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence 4799999999999999999999999999999999988887776664433 78889999999999999999999888 689
Q ss_pred cEEEECCCCCCCCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
|++|||||........+ .+.+++++++++|+.+++.+++.++|.|++++.++||++||..+..+.+....|++||++++
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~ 159 (257)
T PRK07024 80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAI 159 (257)
T ss_pred CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHH
Confidence 99999999865443333 78899999999999999999999999998888899999999999999899999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
.|+++++.|+.++||+|++++||+++|++..... .+.....+|+++++.++..+...
T Consensus 160 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 160 KYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIARG 216 (257)
T ss_pred HHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999854211 11223468999999999888654
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=246.21 Aligned_cols=234 Identities=27% Similarity=0.345 Sum_probs=203.1
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCC--CHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAA--SPDQREKLIQEV 88 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~--~~~~~~~~~~~~ 88 (272)
...+++|++||||++++||.+++++|+++|++|++++|+.+..+++.+++.+.+ .++.++.+|++ +.++++++++.+
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999988888777776543 35666777775 789999999999
Q ss_pred HHHcCCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 89 GSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
.+.+ +++|+||||||.. ...++.+.+.+++++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++...|
T Consensus 87 ~~~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 165 (247)
T PRK08945 87 EEQF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAY 165 (247)
T ss_pred HHHh-CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCccc
Confidence 9888 6899999999974 3356677888999999999999999999999999998888999999999988888889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||++++.+++.++.++...+|++++++||++.|++.....+.. ....+.+|+|+++.+.+++++...+
T Consensus 166 ~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (247)
T PRK08945 166 AVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYLYLMGDDSRR 235 (247)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHHHHhCccccc
Confidence 999999999999999999999999999999999998754332211 1235679999999999999988999
Q ss_pred ccccEEEeC
Q 024125 248 ITGQIISVD 256 (272)
Q Consensus 248 ~~G~~i~~d 256 (272)
++|+++...
T Consensus 236 ~~g~~~~~~ 244 (247)
T PRK08945 236 KNGQSFDAQ 244 (247)
T ss_pred cCCeEEeCC
Confidence 999998643
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=244.53 Aligned_cols=243 Identities=31% Similarity=0.446 Sum_probs=204.2
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+++++|||||+|+||++++++|+++|++|++++|+ .+..++..+.+... ...+.++.+|+++.++++++++++.+.+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467999999999999999999999999999999986 44455555555433 3457788999999999999999999888
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||.....++.+.+.++++.++++|+.+++.+++++.|++.+.+ +.+++++|..+..+.++...|++||+
T Consensus 84 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~sK~ 161 (249)
T PRK09135 84 -GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR-GAIVNITDIHAERPLKGYPVYCAAKA 161 (249)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC-eEEEEEeChhhcCCCCCchhHHHHHH
Confidence 6899999999987777777788899999999999999999999999987654 78899988888888888899999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
+++.+++.++.++.+ +++++++.||++.|++..... ............+.....+++|+++++.+++.+ ..+.+|++
T Consensus 162 ~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~ 238 (249)
T PRK09135 162 ALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSF-DEEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQI 238 (249)
T ss_pred HHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccC-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcE
Confidence 999999999999965 799999999999999864322 223333444556677778999999999888864 56789999
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
+++++|..++
T Consensus 239 ~~i~~g~~~~ 248 (249)
T PRK09135 239 LAVDGGRSLT 248 (249)
T ss_pred EEECCCeecc
Confidence 9999998653
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=258.01 Aligned_cols=213 Identities=25% Similarity=0.279 Sum_probs=176.8
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
..|++++||||++|||+++|++|+++|++|++++|++++++++.++++.. +.++..+.+|+++ ++.+.++++.+.+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~ 128 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI 128 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999988888654 3477788999985 2223333343333
Q ss_pred C-CCccEEEECCCCCCC--CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-C-CCCChhh
Q 024125 93 N-GKLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-H-VGSGSIY 167 (272)
Q Consensus 93 ~-~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-~-~~~~~~Y 167 (272)
+ .++|++|||||.... .++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+.. + .+....|
T Consensus 129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y 208 (320)
T PLN02780 129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY 208 (320)
T ss_pred cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence 2 247799999998643 467788999999999999999999999999999988889999999998864 3 5778999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
++||+++++|+++++.|++++||+|++++||+++|+|.... . .. ....+|+++|+.++..+.
T Consensus 209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~--~----------~~-~~~~~p~~~A~~~~~~~~ 270 (320)
T PLN02780 209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR--R----------SS-FLVPSSDGYARAALRWVG 270 (320)
T ss_pred HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc--C----------CC-CCCCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999986411 0 00 113589999999988874
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=278.16 Aligned_cols=250 Identities=33% Similarity=0.426 Sum_probs=218.4
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+...+.||++|||||+||||++++++|+++|++|++++|+.+.++...+++... .++..+.+|+++.++++++++++.+
T Consensus 416 ~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~ 494 (681)
T PRK08324 416 KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAAL 494 (681)
T ss_pred CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 344578999999999999999999999999999999999998888777766544 4688899999999999999999998
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CeEEEecCCCCCCCCCCChhhHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+.+.|++++. |+||++||..+..+.++...|++
T Consensus 495 ~~-g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~a 573 (681)
T PRK08324 495 AF-GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGA 573 (681)
T ss_pred Hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHH
Confidence 88 68999999999988888888999999999999999999999999999988764 89999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcc--cChhhHhhh----------hCHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYT--KTSLVERLL----------ENKEFVDKVIARTPLQRVGEPEEVASLV 237 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v--~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~e~a~~~ 237 (272)
+|+++++++++++.++.++||+|+.++||.+ .|++..... ...+....+....+.+.+.+++|+++++
T Consensus 574 sKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~ 653 (681)
T PRK08324 574 AKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAV 653 (681)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHH
Confidence 9999999999999999999999999999999 887653211 0111223345566778889999999999
Q ss_pred HHHhcCCCCCccccEEEeCCCcCCC
Q 024125 238 AYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.+++++.....+|+.+++|||....
T Consensus 654 ~~l~s~~~~~~tG~~i~vdgG~~~~ 678 (681)
T PRK08324 654 VFLASGLLSKTTGAIITVDGGNAAA 678 (681)
T ss_pred HHHhCccccCCcCCEEEECCCchhc
Confidence 9999877788999999999997653
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=257.93 Aligned_cols=238 Identities=23% Similarity=0.246 Sum_probs=189.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++. .+.++.+|++|.++++++++++.+.+
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence 45789999999999999999999999999999999999888877766653 36778999999999999999998887
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC------------C
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------H 160 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~------------~ 160 (272)
+++|+||||||.... ..+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+.. +
T Consensus 98 -~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~ 174 (315)
T PRK06196 98 -RRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG 174 (315)
T ss_pred -CCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence 689999999997532 2345667899999999999999999999999888778999999975422 2
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHH-HHHHH-hcCCCC-CCCCHHHHHHHH
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEF-VDKVI-ARTPLQ-RVGEPEEVASLV 237 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~-~~~~~~-~~~~~~e~a~~~ 237 (272)
.++...|++||++++.+++.++.++.++||+|++++||++.|++.......... ..+.. ...+.. +..+|+|+|..+
T Consensus 175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 254 (315)
T PRK06196 175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQ 254 (315)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHH
Confidence 345578999999999999999999999999999999999999986543211110 00110 011222 467999999999
Q ss_pred HHHhcCCCCCccccEEEeCC
Q 024125 238 AYLCLPAASYITGQIISVDG 257 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dg 257 (272)
+++++......+|..+..|.
T Consensus 255 ~~l~~~~~~~~~~g~~~~~~ 274 (315)
T PRK06196 255 VWAATSPQLAGMGGLYCEDC 274 (315)
T ss_pred HHHhcCCccCCCCCeEeCCC
Confidence 99997443333444444444
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=250.74 Aligned_cols=225 Identities=22% Similarity=0.261 Sum_probs=191.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+|++|||||+||||++++++|+++|++|++++|+.++++.+.+. .+.++..+.+|++|.+++.++++.+.+.+ ++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATF-GP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence 468999999999999999999999999999999998876655432 23467788999999999999999999888 68
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|++|||||.....++.+.+.+++++++++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|++++
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~ 158 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE 158 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence 99999999987777888899999999999999999999999999999887789999999999988899999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-----CHHH------HHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-----NKEF------VDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-----~~~~------~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
.++++++.++.+.|+++++++||+++|++...... .++. ........+...+.+|+|+++.+++++...
T Consensus 159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~ 238 (277)
T PRK06180 159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD 238 (277)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999986432110 0111 111112234556779999999999998643
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=248.31 Aligned_cols=220 Identities=26% Similarity=0.321 Sum_probs=182.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
|+++||||++|||++++++|+++| +.|++..|+.... . ...++.++++|+++.++++++.++ + ++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~~~~~~~~~Dls~~~~~~~~~~~----~-~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QHDNVQWHALDVTDEAEIKQLSEQ----F-TQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--ccCceEEEEecCCCHHHHHHHHHh----c-CC
Confidence 579999999999999999999985 5666666654321 1 134678889999999998885543 4 68
Q ss_pred ccEEEECCCCCC------CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC---CCCCChh
Q 024125 96 LNILVNNVGTNI------RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---HVGSGSI 166 (272)
Q Consensus 96 id~li~~ag~~~------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~---~~~~~~~ 166 (272)
+|++|||||... ..++.+.+.+.+++.+++|+.+++.+++.++|.|++++.++++++||..+.. +.+++..
T Consensus 68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~ 147 (235)
T PRK09009 68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYS 147 (235)
T ss_pred CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcch
Confidence 999999999853 2356678889999999999999999999999999887778999998865432 3456779
Q ss_pred hHHHHHHHHHHHHHHHHHHcc--CCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 167 YGATKAAMNQLTRNLACEWAK--DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~--~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
|+++|+++++|+++++.|+.+ .+|+|++|+||+++|++..... ...|.++..+|+|+++.+++++++.
T Consensus 148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~a~~~~~l~~~~ 217 (235)
T PRK09009 148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ----------QNVPKGKLFTPEYVAQCLLGIIANA 217 (235)
T ss_pred hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh----------hccccCCCCCHHHHHHHHHHHHHcC
Confidence 999999999999999999987 5899999999999999965321 2345666789999999999999988
Q ss_pred CCCccccEEEeCCCcC
Q 024125 245 ASYITGQIISVDGGFT 260 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~ 260 (272)
..+.+|+++.+|||+.
T Consensus 218 ~~~~~g~~~~~~g~~~ 233 (235)
T PRK09009 218 TPAQSGSFLAYDGETL 233 (235)
T ss_pred ChhhCCcEEeeCCcCC
Confidence 8899999999999986
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=233.95 Aligned_cols=186 Identities=29% Similarity=0.407 Sum_probs=171.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|.+.|.++|||||++|||+++|++|.+.|.+|++++|+++++++.+++.. .+....||+.|.++.+++++++.+.+
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p----~~~t~v~Dv~d~~~~~~lvewLkk~~ 76 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP----EIHTEVCDVADRDSRRELVEWLKKEY 76 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc----chheeeecccchhhHHHHHHHHHhhC
Confidence 45789999999999999999999999999999999999999999887654 56778999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCC--CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+.++++|||||+...-.+. +...++.++.+++|+.++..+++.++|++.+++.+.||+|||..++.+....+.||++
T Consensus 77 -P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaT 155 (245)
T COG3967 77 -PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCAT 155 (245)
T ss_pred -CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhh
Confidence 6899999999986554443 3355678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccCh
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~ 203 (272)
|+|++.|+.+|+.+++..+|+|.-+.|-.|+|+
T Consensus 156 KAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 156 KAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 999999999999999999999999999999996
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=250.39 Aligned_cols=230 Identities=23% Similarity=0.301 Sum_probs=194.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||+||||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++.+.+.+
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~- 81 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF- 81 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999888888887776666678889999999999999999999988
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC------CeEEEecCCCCCCCCCCChhh
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV------GSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~------g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++|+||||||.....++.+.+.++|++++++|+.++++++++++|+|.++.. ++||++||..+..+.++...|
T Consensus 82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y 161 (287)
T PRK06194 82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIY 161 (287)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcch
Confidence 68999999999987778888899999999999999999999999999987654 799999999999888889999
Q ss_pred HHHHHHHHHHHHHHHHHHcc--CCeeEEEeeCCcccChhhHhhhhCH-------------HHHHHHHhcCCCCCCCCHHH
Q 024125 168 GATKAAMNQLTRNLACEWAK--DNIRTNSVAPWYTKTSLVERLLENK-------------EFVDKVIARTPLQRVGEPEE 232 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~--~~i~v~~v~PG~v~t~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~e 232 (272)
+++|++++.|+++++.++.. .+|++++++||+++|++.......+ ................+++|
T Consensus 162 ~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d 241 (287)
T PRK06194 162 NVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEE 241 (287)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHH
Confidence 99999999999999999874 4699999999999999865432111 01111111111112369999
Q ss_pred HHHHHHHHhcCC
Q 024125 233 VASLVAYLCLPA 244 (272)
Q Consensus 233 ~a~~~~~l~~~~ 244 (272)
+|+.++.++...
T Consensus 242 va~~i~~~~~~~ 253 (287)
T PRK06194 242 VAQLVFDAIRAG 253 (287)
T ss_pred HHHHHHHHHHcC
Confidence 999999987543
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=231.73 Aligned_cols=248 Identities=27% Similarity=0.333 Sum_probs=220.0
Q ss_pred CCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.|+||+.||+|-. +.|+..||+.+.++|+++.++..++ +++...+++.+......+.+||+++.++++++++++.++
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~ 81 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK 81 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence 5899999999976 7899999999999999999999877 555555555444334567899999999999999999999
Q ss_pred cCCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 92 FNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 92 ~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
| +++|+++|+.+..+ .+.+.+++.|.|...+++...+...+.+++.|.|.. +|.||-++=..+....|++...
T Consensus 82 ~-g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNvM 158 (259)
T COG0623 82 W-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNVM 158 (259)
T ss_pred h-CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCchh
Confidence 9 79999999999755 356778899999999999999999999999999965 4899999988888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+.+|++++.-+|.||.+++++|||||+|+-|+++|--.+.+..-...+.+.....|+++..++|||+++..||+|+.+.-
T Consensus 159 GvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssg 238 (259)
T COG0623 159 GVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSG 238 (259)
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhcc
Confidence 99999999999999999999999999999999999776665444567777888899999999999999999999999999
Q ss_pred ccccEEEeCCCcCCCCCC
Q 024125 248 ITGQIISVDGGFTANGFN 265 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~~~ 265 (272)
+||+++.+|+|+++-++.
T Consensus 239 iTGei~yVD~G~~i~~m~ 256 (259)
T COG0623 239 ITGEIIYVDSGYHIMGMG 256 (259)
T ss_pred cccceEEEcCCceeeccC
Confidence 999999999999887653
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=240.29 Aligned_cols=238 Identities=36% Similarity=0.565 Sum_probs=207.5
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
+||||++++||++++++|+++|++|++++|+. +..+...+.+...+.++..+.+|++|.++++++++++.+.+ +++|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence 58999999999999999999999999998875 45555666666666678889999999999999999999888 68999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHHH
Q 024125 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178 (272)
Q Consensus 99 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 178 (272)
+||++|.....++.+.+.+++++.+++|+.+++.+++.+.+++.+.+.++++++||..+..+.+....|+++|++++.++
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~ 159 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT 159 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence 99999987666667788899999999999999999999999998777789999999988888888999999999999999
Q ss_pred HHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 179 ~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
+.++.++...|++++.++||+++|++..... +..........+..++.+++|+++.+.+++++...+.+|+.+++|+|
T Consensus 160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 160 KSLAKELASRNITVNAVAPGFIDTDMTDKLS--EKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred HHHHHHHhhcCeEEEEEEECCCCChhhhhcC--hHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 9999999999999999999999998765432 23333444566777889999999999999987778899999999998
Q ss_pred cC
Q 024125 259 FT 260 (272)
Q Consensus 259 ~~ 260 (272)
+.
T Consensus 238 ~~ 239 (239)
T TIGR01830 238 MY 239 (239)
T ss_pred cC
Confidence 63
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=254.29 Aligned_cols=244 Identities=23% Similarity=0.191 Sum_probs=192.7
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
...++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++... +.++.++.+|++|.++++++++++
T Consensus 10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 89 (306)
T PRK06197 10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL 89 (306)
T ss_pred ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 345689999999999999999999999999999999999988887777666532 356888899999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC---------
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--------- 159 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~--------- 159 (272)
.+++ +++|+||||||..... .+.+.++++..+++|+.+++.+++.++|+|++.+.++||++||..+..
T Consensus 90 ~~~~-~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~ 166 (306)
T PRK06197 90 RAAY-PRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL 166 (306)
T ss_pred HhhC-CCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence 9888 6899999999975432 345667899999999999999999999999887778999999976432
Q ss_pred ----CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEe--eCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHH
Q 024125 160 ----HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV--APWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEV 233 (272)
Q Consensus 160 ----~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v--~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 233 (272)
+.++...|++||++++.|++.+++++.+.+++|+++ +||+++|++...+... ....+....+. ...+|++.
T Consensus 167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~--~~~~~~~~~~~-~~~~~~~g 243 (306)
T PRK06197 167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA--LRPVATVLAPL-LAQSPEMG 243 (306)
T ss_pred CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH--HHHHHHHHHhh-hcCCHHHH
Confidence 234567899999999999999999998888777655 6999999997654221 11111111111 23467777
Q ss_pred HHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 234 ASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 234 a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
+...++++.. ....+|+++..||+...
T Consensus 244 ~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 270 (306)
T PRK06197 244 ALPTLRAATD-PAVRGGQYYGPDGFGEQ 270 (306)
T ss_pred HHHHHHHhcC-CCcCCCeEEccCccccc
Confidence 7777766653 45568999988876543
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=245.98 Aligned_cols=221 Identities=26% Similarity=0.317 Sum_probs=193.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|+++++++|||||+||||++++++|+++|++|++++|+.+.+++..+++ ..+.++.++.+|++|.++++++++.+.+ +
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~ 78 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M 78 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c
Confidence 4578999999999999999999999999999999999998888877776 3456788899999999999999998876 5
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|+++|+
T Consensus 79 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 157 (263)
T PRK09072 79 -GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKF 157 (263)
T ss_pred -CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHH
Confidence 6899999999987777788889999999999999999999999999998887789999999998888888999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
++.+++++++.++.+++|+|++++||+++|++...... .. .........+|+|+++.+++++..
T Consensus 158 a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~--~~-----~~~~~~~~~~~~~va~~i~~~~~~ 221 (263)
T PRK09072 158 ALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ--AL-----NRALGNAMDDPEDVAAAVLQAIEK 221 (263)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc--cc-----cccccCCCCCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999998643211 00 011123567999999999999964
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=253.55 Aligned_cols=241 Identities=22% Similarity=0.233 Sum_probs=190.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++... +.++.++.+|++|.++++++++++.+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999988888877643 34688899999999999999999998
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC----------
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------- 160 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~---------- 160 (272)
.+ +++|+||||||+... +..+.+.++++.++++|+.+++.+++.++|.|++. .++||++||..+..+
T Consensus 90 ~~-~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~ 166 (313)
T PRK05854 90 EG-RPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWE 166 (313)
T ss_pred hC-CCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccccccc
Confidence 88 689999999998543 33456778999999999999999999999999765 489999999876432
Q ss_pred --CCCChhhHHHHHHHHHHHHHHHHHH--ccCCeeEEEeeCCcccChhhHhhhh----CHHHHHHHHhc-CCCC-CCCCH
Q 024125 161 --VGSGSIYGATKAAMNQLTRNLACEW--AKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDKVIAR-TPLQ-RVGEP 230 (272)
Q Consensus 161 --~~~~~~Y~~sK~a~~~~~~~la~el--~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~-~~~~-~~~~~ 230 (272)
+++...|+.||+|+.+|++.+++++ ..+||+||+++||+++|++...... ...+...+... .... ...++
T Consensus 167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
T PRK05854 167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTV 246 (313)
T ss_pred ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCH
Confidence 3456789999999999999999865 4568999999999999998643210 01111111111 1111 24588
Q ss_pred HHHHHHHHHHhcCCCCCccccEEEeCC
Q 024125 231 EEVASLVAYLCLPAASYITGQIISVDG 257 (272)
Q Consensus 231 ~e~a~~~~~l~~~~~~~~~G~~i~~dg 257 (272)
++.+...++++.... ..+|.++.-++
T Consensus 247 ~~ga~~~l~~a~~~~-~~~g~~~~~~~ 272 (313)
T PRK05854 247 ESAILPALYAATSPD-AEGGAFYGPRG 272 (313)
T ss_pred HHHHHHhhheeeCCC-CCCCcEECCCc
Confidence 999999988875432 23577776443
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-35 Score=245.68 Aligned_cols=236 Identities=22% Similarity=0.223 Sum_probs=194.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC-C
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG-K 95 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~ 95 (272)
|++|||||+||||++++++|+++|++|++++|+. +.++... ...+.++.++.+|+++.++++++++++.+.++. .
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA---EQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH---hccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 6899999999999999999999999999999986 3333322 222456788899999999999999998876621 1
Q ss_pred c--cEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 96 L--NILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 96 i--d~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|+|++. ..++||++||..+..+.++...|+++|
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 158 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK 158 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence 2 2899999974 33567788999999999999999999999999999875 357999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc--cCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 172 AAMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 172 ~a~~~~~~~la~el~--~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
++++++++.++.|+. +.+|+|++|.||+++|++....... ...........+.+++.+|+|+++.+++++++.
T Consensus 159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~- 237 (251)
T PRK06924 159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE- 237 (251)
T ss_pred HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-
Confidence 999999999999975 4689999999999999987643211 112233344456778899999999999999864
Q ss_pred CCccccEEEeCC
Q 024125 246 SYITGQIISVDG 257 (272)
Q Consensus 246 ~~~~G~~i~~dg 257 (272)
.+++|+.+.+|+
T Consensus 238 ~~~~G~~~~v~~ 249 (251)
T PRK06924 238 DFPNGEVIDIDE 249 (251)
T ss_pred cCCCCCEeehhh
Confidence 889999999885
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=243.85 Aligned_cols=229 Identities=21% Similarity=0.285 Sum_probs=194.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
..+.|++|||||+|+||++++++|+++|++|++++|+.+.+.+..+++...+.++.++.+|+++.++++++++++.+.+
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 85 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL- 85 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc-
Confidence 4567899999999999999999999999999999999888777776666656678888999999999999999998888
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....+..+.+.+++++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|+++|++
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 165 (274)
T PRK07775 86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAG 165 (274)
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHH
Confidence 68999999999877677778899999999999999999999999999987777899999999988888888899999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC--HHHHHHHH--hcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN--KEFVDKVI--ARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
++.+++.+++++.+.||++++++||+++|++....... ........ .......+.+++|++++++++++.
T Consensus 166 ~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~ 239 (274)
T PRK07775 166 LEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAET 239 (274)
T ss_pred HHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcC
Confidence 99999999999998999999999999999864332111 01111111 122345678999999999999974
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=242.32 Aligned_cols=230 Identities=22% Similarity=0.304 Sum_probs=191.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++++||||+||||+++++.|+++|++|++++|+.++++++.+++ +.++.++.+|+++.++++++++++.+.+ +++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-RNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 47999999999999999999999999999999988777665544 3467788999999999999999998888 6899
Q ss_pred EEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 98 ILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 98 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
++|||||... ..++.+.+.+++++++++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|+++|+++++
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~ 156 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence 9999999743 346667889999999999999999999999999988877899999999988888888999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHh--hhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVER--LLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
+++.++.++.+++|+|+++.||++.|++... +........ .........+|+|+|+.++++++....+.+++...
T Consensus 157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~ 233 (248)
T PRK10538 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE---KTYQNTVALTPEDVSEAVWWVATLPAHVNINTLEM 233 (248)
T ss_pred HHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHH---hhccccCCCCHHHHHHHHHHHhcCCCcccchhhcc
Confidence 9999999999999999999999998554332 111111111 11122345699999999999998766776666543
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=246.63 Aligned_cols=235 Identities=27% Similarity=0.288 Sum_probs=190.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|++|||||+||||++++++|+++|++|++++|+.+ ..+.+.++++..+.++..+.+|+++.++++++++++.+.+
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 367899999999999999999999999999999998753 4555556665555678889999999999999999998888
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-----CCCCCChhh
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-----SHVGSGSIY 167 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-----~~~~~~~~Y 167 (272)
+++|++|||||..... .. +++..+++|+.+++++++++.|+|.+ .++||++||..+. .+.+....|
T Consensus 83 -~~~d~vi~~ag~~~~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y 153 (248)
T PRK07806 83 -GGLDALVLNASGGMES---GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPV 153 (248)
T ss_pred -CCCcEEEECCCCCCCC---CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHH
Confidence 6899999999864221 11 24568899999999999999999854 3799999996542 233446789
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
++||++++.++++++.++.+++|+|+++.||++.|++...+.. .+.... ....|.+++.+|+|+++.+.++++ .
T Consensus 154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~--~ 229 (248)
T PRK07806 154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE--ARREAAGKLYTVSEFAAEVARAVT--A 229 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHH--HHHhhhcccCCHHHHHHHHHHHhh--c
Confidence 9999999999999999999999999999999999987654322 122211 123567889999999999999996 5
Q ss_pred CCccccEEEeCCCcCC
Q 024125 246 SYITGQIISVDGGFTA 261 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~ 261 (272)
.+++|++++++||...
T Consensus 230 ~~~~g~~~~i~~~~~~ 245 (248)
T PRK07806 230 PVPSGHIEYVGGADYF 245 (248)
T ss_pred cccCccEEEecCccce
Confidence 6889999999999654
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=245.54 Aligned_cols=241 Identities=24% Similarity=0.281 Sum_probs=201.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++|++|||||+|+||+++++.|+++|++|++++|+.+..++..+++... +.++.++.+|++|.+++++ ++++.+.+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~- 79 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI- 79 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc-
Confidence 5789999999999999999999999999999999988887776665543 2468888999999999999 88888888
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||......+.+.+.+++++.+++|+.+++.++++++|+|++.+.++||++||..+..+.++...|+++|++
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~ 159 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYA 159 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHH
Confidence 68999999999877777888899999999999999999999999999988877899999999888888899999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--------C---HHHHHHHHh--cCCCCCCCCHHHHHHHHHHH
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--------N---KEFVDKVIA--RTPLQRVGEPEEVASLVAYL 240 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--------~---~~~~~~~~~--~~~~~~~~~~~e~a~~~~~l 240 (272)
+++++++++.++.++||+++.++||+++|++...... . ......... ..+..++.+|+|++++++++
T Consensus 160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~ 239 (280)
T PRK06914 160 LEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEI 239 (280)
T ss_pred HHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHH
Confidence 9999999999999999999999999999997643211 0 111111111 12456678999999999999
Q ss_pred hcCCCCCccccEEEeCCCcCC
Q 024125 241 CLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 241 ~~~~~~~~~G~~i~~dgG~~~ 261 (272)
++.... +.+++++.|..+
T Consensus 240 ~~~~~~---~~~~~~~~~~~~ 257 (280)
T PRK06914 240 AESKRP---KLRYPIGKGVKL 257 (280)
T ss_pred HcCCCC---CcccccCCchHH
Confidence 975433 245676655433
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=244.35 Aligned_cols=214 Identities=22% Similarity=0.229 Sum_probs=181.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHH-HHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVE-LNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+|++|||||++|||++++++|+++| ++|++++|+.+. ++++.+++...+ .++.++.+|++|.++++++++++.+ +
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence 46899999999999999999999995 899999999876 777777776644 3788899999999999999998876 4
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||+|..........+.++..+++++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||+
T Consensus 86 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa 164 (253)
T PRK07904 86 -GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA 164 (253)
T ss_pred -CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence 6899999999975332222224556678899999999999999999999888899999999988877788889999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
++.+|+++++.|+.+++|+|++++||+++|++...... .....+|+|+|+.++..+...
T Consensus 165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-------------~~~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-------------APLTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-------------CCCCCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999998754311 122458999999999988643
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=240.04 Aligned_cols=241 Identities=38% Similarity=0.558 Sum_probs=200.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH--HHHHHHHHHhCC-CeEEEEEecCCC-HHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE--LNKCLKEWQSKG-FVVSGSVCDAAS-PDQREKLIQEVG 89 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~ 89 (272)
.+++|++||||+++|||+++|+.|+++|++|+++.|+.+. .+...+.....+ ..+....+|+++ .++++.+++.+.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999998888877654 333333333112 367778899998 999999999999
Q ss_pred HHcCCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC-Chhh
Q 024125 90 SKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-GSIY 167 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~-~~~Y 167 (272)
+.+ +++|++|||||.... .++.+.+.++|++.+++|+.+++.+++.+.|.++++ +||++||..+. ..++ ...|
T Consensus 82 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y 156 (251)
T COG1028 82 EEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAY 156 (251)
T ss_pred HHc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchH
Confidence 998 689999999999777 488899999999999999999999999888888843 99999999998 7777 4999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH-HHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC-C
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK-EFVDKVIARTPLQRVGEPEEVASLVAYLCLPA-A 245 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~-~ 245 (272)
++||+|+++|+++++.|+.++||++++|+||+++|++........ ..........+..+...|+++++.+.++.+.. .
T Consensus 157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (251)
T COG1028 157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAA 236 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcchh
Confidence 999999999999999999999999999999999999987543321 00112222225557888999999999888763 7
Q ss_pred CCccccEEEeCCCc
Q 024125 246 SYITGQIISVDGGF 259 (272)
Q Consensus 246 ~~~~G~~i~~dgG~ 259 (272)
.+++|+.+.+|||.
T Consensus 237 ~~~~g~~~~~~~~~ 250 (251)
T COG1028 237 SYITGQTLPVDGGL 250 (251)
T ss_pred ccccCCEEEeCCCC
Confidence 78999999999886
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=246.71 Aligned_cols=220 Identities=30% Similarity=0.345 Sum_probs=188.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++++++||||+||||++++++|+++|++|++++|+.+..+. ...+.++++|++|.++++++++.+.+.+ ++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~ 73 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARA-GR 73 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhC-CC
Confidence 46899999999999999999999999999999998765432 1356778999999999999999999988 68
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|++|||||....+++.+.+.+++++++++|+.+++.+++.++|+|++++.++||++||..+..+.+....|+++|++++
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 153 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE 153 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence 99999999998778888889999999999999999999999999999888899999999999888888999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH----H---HHHHHH--hcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK----E---FVDKVI--ARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~----~---~~~~~~--~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
.++++++.|++++||+|++++||+++|++........ . ...... ...+.....+|+++++.++.+++..
T Consensus 154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~ 231 (270)
T PRK06179 154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP 231 (270)
T ss_pred HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999875432110 0 000010 1123455679999999999998653
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=237.58 Aligned_cols=220 Identities=29% Similarity=0.375 Sum_probs=195.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++++++||||++++||++++++|+++|++|++++|+.++.++..+++...+.++.++.+|+++.++++++++++.+++
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL- 82 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 3678999999999999999999999999999999999988888777776666688889999999999999999999888
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||+|....+.+.+.+.+++++.+++|+.+++.+++++.|+|.+++.+++|++||..+..+.++...|+++|++
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 162 (239)
T PRK07666 83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFG 162 (239)
T ss_pred CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHH
Confidence 68999999999877777778899999999999999999999999999988878899999999998888888999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
++.+++.++.++.++||+++.++||++.|++....... ........+++|+++.+..+++.
T Consensus 163 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~~l~~ 223 (239)
T PRK07666 163 VLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT---------DGNPDKVMQPEDLAEFIVAQLKL 223 (239)
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc---------ccCCCCCCCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999986433110 01123457899999999999864
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=241.98 Aligned_cols=219 Identities=24% Similarity=0.288 Sum_probs=189.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||+||||++++++|+++|++|++++|+.+.++++.+.+. +.++.++++|+++.++++++++.+.+...+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 789999999999999999999999999999999988887766554 457888999999999999999988776226899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
++|||||......+.+.+.+++++++++|+.+++.+++++.|+|+..+.++||++||..+..+.+....|+.||+++++|
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGL 159 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence 99999998777788888999999999999999999999999999988789999999999988888899999999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+++++.++.+++|+++++.||+++|++...... +...... ...+...+|+++++.++.++.
T Consensus 160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~~~~~~~--~~~~~~~~~~~va~~~~~~~~ 220 (260)
T PRK08267 160 TEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN--EVDAGST--KRLGVRLTPEDVAEAVWAAVQ 220 (260)
T ss_pred HHHHHHHhcccCcEEEEEecCCcCCcccccccc--hhhhhhH--hhccCCCCHHHHHHHHHHHHh
Confidence 999999999999999999999999998654111 1111111 122335689999999999985
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=247.25 Aligned_cols=240 Identities=19% Similarity=0.140 Sum_probs=188.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++...+.++.++.+|+++.++++++++++.+..
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 81 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG- 81 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC-
Confidence 4678999999999999999999999999999999999998888887775445578889999999999999999987665
Q ss_pred CCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC--CeEEEecCCCCCC-----------
Q 024125 94 GKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV--GSIVFISSVGGLS----------- 159 (272)
Q Consensus 94 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--g~ii~vsS~~~~~----------- 159 (272)
+++|+||||||+... ....+.+.++++.++++|+.|++.++++++|.|++.+. ++||++||.....
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~ 161 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA 161 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence 689999999997543 23346688999999999999999999999999987753 6999999965321
Q ss_pred ------------------------CCCCChhhHHHHHHHHHHHHHHHHHHc-cCCeeEEEeeCCcc-cChhhHhhhhCHH
Q 024125 160 ------------------------HVGSGSIYGATKAAMNQLTRNLACEWA-KDNIRTNSVAPWYT-KTSLVERLLENKE 213 (272)
Q Consensus 160 ------------------------~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~i~v~~v~PG~v-~t~~~~~~~~~~~ 213 (272)
++.+..+|+.||.+...+++.+++++. .+||+|++++||+| .|++.+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~ 241 (322)
T PRK07453 162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQ 241 (322)
T ss_pred ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHH
Confidence 122346899999999999999999995 46899999999999 5887644321111
Q ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 214 FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
...............++++.+..+++++.+.....+|.++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~ 282 (322)
T PRK07453 242 KLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWS 282 (322)
T ss_pred HHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence 11111111112334578888888888876544456888886
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=236.53 Aligned_cols=213 Identities=22% Similarity=0.312 Sum_probs=188.9
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+|++|||||++|||++++++|+++|++|++++|+.++.++..+++... +.++.++++|+++.++++++++++.+.+ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-G 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 689999999999999999999999999999999998888877776543 5578889999999999999999999988 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC-ChhhHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-GSIYGATKAA 173 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~-~~~Y~~sK~a 173 (272)
++|++|||||+....++.+.+.+.+++++++|+.+++.++++++|+|++.+.++||++||..+..+.+. ...|+.||++
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a 160 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG 160 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence 899999999997777777788899999999999999999999999998887789999999888777664 6889999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
++.+++.++.++...+|+|++++||+++|++...... .....++++.++.++..+..
T Consensus 161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~~~a~~i~~~~~~ 217 (248)
T PRK08251 161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTETGVKALVKAIEK 217 (248)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------CCccCCHHHHHHHHHHHHhc
Confidence 9999999999999899999999999999998654311 12356899999999888754
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=225.51 Aligned_cols=240 Identities=30% Similarity=0.428 Sum_probs=207.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+.+|-+.||||+.||+|++.++.|+++|+.|++.+--..+.++..+++ +.++.+.++|++++++++..++..+.+|
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf- 81 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF- 81 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc-
Confidence 467889999999999999999999999999999998887777777665 5789999999999999999999999999
Q ss_pred CCccEEEECCCCCCC------CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCeEEEecCCCCCCCC
Q 024125 94 GKLNILVNNVGTNIR------KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISSVGGLSHV 161 (272)
Q Consensus 94 ~~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~ii~vsS~~~~~~~ 161 (272)
+++|.++||||+... ..-...+.|++++.+++|+.|+++.++.....|..+ .+|.|||..|.+++.+-
T Consensus 82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq 161 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ 161 (260)
T ss_pred cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence 799999999997322 233346789999999999999999999999999654 24899999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCC-CCCCHHHHHHHHHHH
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ-RVGEPEEVASLVAYL 240 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~a~~~~~l 240 (272)
.+..+|++||.++.+|+--+++++...|||+++|.||.++|+++..+.+ ....-.....|.. +.+.|.|-+..+-.+
T Consensus 162 ~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpe--kv~~fla~~ipfpsrlg~p~eyahlvqai 239 (260)
T KOG1199|consen 162 TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPE--KVKSFLAQLIPFPSRLGHPHEYAHLVQAI 239 (260)
T ss_pred cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhH--HHHHHHHHhCCCchhcCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987733 2222233445654 678999999999888
Q ss_pred hcCCCCCccccEEEeCCCcCC
Q 024125 241 CLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 241 ~~~~~~~~~G~~i~~dgG~~~ 261 (272)
. +..|+||++|++||..-+
T Consensus 240 i--enp~lngevir~dgalrm 258 (260)
T KOG1199|consen 240 I--ENPYLNGEVIRFDGALRM 258 (260)
T ss_pred H--hCcccCCeEEEecceecC
Confidence 8 789999999999997543
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=246.51 Aligned_cols=236 Identities=29% Similarity=0.334 Sum_probs=195.0
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
...++.+++++|||+++|||+++|++|+++|++|++.+|+.++.++.++++... ..++.++++|+++.+++.++.+++
T Consensus 29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~ 108 (314)
T KOG1208|consen 29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF 108 (314)
T ss_pred ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999999999999998863 567888999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC---------
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--------- 159 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~--------- 159 (272)
.+.+ +++|++|||||+..+.. ..+.|.+|..|.+|+.|++.+++.++|.|+....+|||++||..+..
T Consensus 109 ~~~~-~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~ 185 (314)
T KOG1208|consen 109 KKKE-GPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSG 185 (314)
T ss_pred HhcC-CCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccc
Confidence 9888 79999999999865544 56778999999999999999999999999988779999999977511
Q ss_pred --C--CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHH
Q 024125 160 --H--VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVAS 235 (272)
Q Consensus 160 --~--~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~ 235 (272)
. +.....|+.||.++..+++.|++.+.+ ||.+++++||.+.|+...+. ..+...+........+.++++-|+
T Consensus 186 ~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~---~~~~~~l~~~l~~~~~ks~~~ga~ 261 (314)
T KOG1208|consen 186 EKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRV---NLLLRLLAKKLSWPLTKSPEQGAA 261 (314)
T ss_pred hhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecc---hHHHHHHHHHHHHHhccCHHHHhh
Confidence 0 333345999999999999999999988 99999999999999943331 111222222222223358999999
Q ss_pred HHHHHhc-CCCCCccccEE
Q 024125 236 LVAYLCL-PAASYITGQII 253 (272)
Q Consensus 236 ~~~~l~~-~~~~~~~G~~i 253 (272)
+.++++. ++-...+|.++
T Consensus 262 t~~~~a~~p~~~~~sg~y~ 280 (314)
T KOG1208|consen 262 TTCYAALSPELEGVSGKYF 280 (314)
T ss_pred heehhccCccccCcccccc
Confidence 9998885 55566777774
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=234.10 Aligned_cols=237 Identities=24% Similarity=0.329 Sum_probs=197.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|+++||||+|+||+++++.|+++|++|++++|++++.+++.+++... .++..+.+|+++.++++++++++...+
T Consensus 1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3578999999999999999999999999999999999998877766665543 357888999999999999999988877
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~~sK 171 (272)
+++|.+++++|.....+.. +.+++++++++|+.+++.+++.++|.|++. +++|++||..+. .+.++...|+++|
T Consensus 80 -~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~ss~~~~~~~~~~~~~Y~~sK 154 (238)
T PRK05786 80 -NAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEG--SSIVLVSSMSGIYKASPDQLSYAVAK 154 (238)
T ss_pred -CCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcC--CEEEEEecchhcccCCCCchHHHHHH
Confidence 6899999999875444433 338899999999999999999999998653 799999998764 3566778899999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.++.+.+|++++++||++.|++... ..+ ... ........+++++++.+.+++++...+.+|+
T Consensus 155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~----~~~-~~~--~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~ 227 (238)
T PRK05786 155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE----RNW-KKL--RKLGDDMAPPEDFAKVIIWLLTDEADWVDGV 227 (238)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch----hhh-hhh--ccccCCCCCHHHHHHHHHHHhcccccCccCC
Confidence 999999999999999999999999999999987421 111 110 0112245789999999999999888899999
Q ss_pred EEEeCCCcCCC
Q 024125 252 IISVDGGFTAN 262 (272)
Q Consensus 252 ~i~~dgG~~~~ 262 (272)
++.+|||..++
T Consensus 228 ~~~~~~~~~~~ 238 (238)
T PRK05786 228 VIPVDGGARLK 238 (238)
T ss_pred EEEECCccccC
Confidence 99999997653
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=233.98 Aligned_cols=212 Identities=25% Similarity=0.295 Sum_probs=186.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
|+++||||++|||+++++.|+++|++|++++|+.++.++..+++... +.++.++++|+++.++++++++++.+ ++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~----~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA----LP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh----cC
Confidence 78999999999999999999999999999999998887777666543 45788899999999999999988753 57
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|++|||+|.....++.+.+.+++.+.+++|+.+++.+++++.|+|.+++.++++++||..+..+.++...|+++|+++++
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 157 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTA 157 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHH
Confidence 99999999876677778899999999999999999999999999998888999999999988888888999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
++++++.|+.+.||+|++++||+++|++..... .+.....+|+|+++.+..+++...
T Consensus 158 ~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~~ 214 (243)
T PRK07102 158 FLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKGK 214 (243)
T ss_pred HHHHHHHHhhccCcEEEEEecCcccChhhhccC------------CCccccCCHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999764321 233446789999999999987543
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=229.90 Aligned_cols=198 Identities=23% Similarity=0.254 Sum_probs=172.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+++||||+++|||++++++|+++ ++|++++|+.. .+++|+++.++++++++++ +++|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~id 57 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEKV-----GKVD 57 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhc-----CCCC
Confidence 37999999999999999999999 99999998753 2579999999999988754 6899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
++|||||.....++.+.+.++|++.+++|+.+++++++.+.|+|++. ++|+++||..+..+.++...|+++|+++++|
T Consensus 58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~ 135 (199)
T PRK07578 58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSFTLTSGILSDEPIPGGASAATVNGALEGF 135 (199)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeEEEEcccccCCCCCCchHHHHHHHHHHHH
Confidence 99999998777778888999999999999999999999999999754 7999999999988889999999999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEe
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~ 255 (272)
+++++.|+ ++||+|++|+||+++|++...- ...+.....+|+|+++.+..+++ ...+|+.|.+
T Consensus 136 ~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~-----------~~~~~~~~~~~~~~a~~~~~~~~---~~~~g~~~~~ 198 (199)
T PRK07578 136 VKAAALEL-PRGIRINVVSPTVLTESLEKYG-----------PFFPGFEPVPAARVALAYVRSVE---GAQTGEVYKV 198 (199)
T ss_pred HHHHHHHc-cCCeEEEEEcCCcccCchhhhh-----------hcCCCCCCCCHHHHHHHHHHHhc---cceeeEEecc
Confidence 99999999 8899999999999999874211 11233456799999999998885 3588998875
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-33 Score=236.01 Aligned_cols=235 Identities=20% Similarity=0.253 Sum_probs=194.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.|++|||||+||||++++++|+++|++|++++|+.+..+++.+.. ..++.++.+|++|.++++++++++.+.+ +++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 77 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAAL-GRI 77 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 478999999999999999999999999999999987776655443 3467888999999999999999988887 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|+||||||....++..+.+.+++++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++||++++.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 157 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG 157 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence 99999999887778888899999999999999999999999999988877899999999888888889999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-------H---HHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-------K---EFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-------~---~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|+++++.++.+.||+++.++||.+.|++....... . ..........+.....+|++++++++..+...
T Consensus 158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~-- 235 (276)
T PRK06482 158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQT-- 235 (276)
T ss_pred HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCC--
Confidence 99999999999999999999999999875432110 0 01111222223333578999999999887532
Q ss_pred CccccEEEeCCC
Q 024125 247 YITGQIISVDGG 258 (272)
Q Consensus 247 ~~~G~~i~~dgG 258 (272)
..+..+++.+|
T Consensus 236 -~~~~~~~~g~~ 246 (276)
T PRK06482 236 -PAPRRLTLGSD 246 (276)
T ss_pred -CCCeEEecChH
Confidence 22455666655
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=236.95 Aligned_cols=224 Identities=28% Similarity=0.365 Sum_probs=192.6
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
++++|||||+|+||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|+++.++++++++++.+++ +++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 4789999999999999999999999999999999888887777776666678889999999999999999999888 689
Q ss_pred cEEEECCCCCCCCCCCCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEY-SAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
|++|||||......+.+. +.+++++.+++|+.+++.+++.++|+|.+.. +++|++||..+..+.++...|+++|++++
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~ 158 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR-GQIVVVSSLAGLTGVPTRSGYAASKHALH 158 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CEEEEEecccccCCCCCccHHHHHHHHHH
Confidence 999999998777777777 8899999999999999999999999987654 89999999998888888999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
.++++++.++.+.+++++++.||++.|++............ .........+.+|+|+++.+.+++..
T Consensus 159 ~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 159 GFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPL-GKSPMQESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred HHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccccc-ccccccccCCCCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999998765432111000 00011123678999999999999964
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-33 Score=235.67 Aligned_cols=218 Identities=22% Similarity=0.292 Sum_probs=181.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||+||||++++++|+++|++|++++|+.+..+++.+ . .+..+.+|+++.++++++++++.+.+ +++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 74 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----A--GFTAVQLDVNDGAALARLAEELEAEH-GGLD 74 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----C--CCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence 789999999999999999999999999999999876654432 2 35677899999999999999998887 6899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
++|||||....+++.+.+.+++++.+++|+.+++.++++++|.|++. .++||++||..+..+.+....|+++|++++.+
T Consensus 75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~ 153 (274)
T PRK05693 75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL 153 (274)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence 99999998777788888999999999999999999999999999764 48999999999988888899999999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-----------HHHHHHHHh--cCCCCCCCCHHHHHHHHHHHhcC
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-----------KEFVDKVIA--RTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-----------~~~~~~~~~--~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
+++++.|+.++||+|++++||+++|++....... ....+.+.. ........+|+++++.++..+..
T Consensus 154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~ 232 (274)
T PRK05693 154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ 232 (274)
T ss_pred HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999986542110 001111111 11123345899999999888753
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=233.86 Aligned_cols=191 Identities=24% Similarity=0.279 Sum_probs=175.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|.|+|||+.+|+|+.+|++|.++|..|+..+-+++..+.+..+.. ..+...++.|++++++++++.+.+.+..
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l 102 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHL 102 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence 35788999999999999999999999999999999988888888877664 4577778999999999999999999987
Q ss_pred CC-CccEEEECCCC-CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 93 NG-KLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 93 ~~-~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+. .+..+|||||+ ...++.+..+.+++++.+++|++|++.++++++|++++.+ |||||+||+.+..+.|...+|++|
T Consensus 103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g~Y~~S 181 (322)
T KOG1610|consen 103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALGPYCVS 181 (322)
T ss_pred ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccccchhh
Confidence 43 49999999996 4778888899999999999999999999999999998876 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~ 206 (272)
|+|++.|+.++++|+.+.||+|..+.||+..|++..
T Consensus 182 K~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 182 KFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 999999999999999999999999999999999874
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=231.71 Aligned_cols=221 Identities=23% Similarity=0.269 Sum_probs=182.3
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH-HHHHcC--C
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE-VGSKFN--G 94 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~~--~ 94 (272)
+++|||||+||||++++++|+++|++|++++|+.+.. . ....+.++..+.+|+++.+++++++++ +.+.++ +
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 4799999999999999999999999999999986531 1 122345788899999999999998876 555442 3
Q ss_pred CccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 95 KLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 95 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
++|++|||||.... .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|++
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 156 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA 156 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence 69999999997543 56777899999999999999999999999999988777899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCCCCCCCCHHHHHH-HHHHHhcCC
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQRVGEPEEVAS-LVAYLCLPA 244 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~a~-~~~~l~~~~ 244 (272)
++++++.++.+ .+.+|++++|+||+++|++....... ...........+.++..+|+|+|+ .+.+|+++.
T Consensus 157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~ 231 (243)
T PRK07023 157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD 231 (243)
T ss_pred HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence 99999999999 78899999999999999986543211 112223344566788899999999 566777654
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=262.87 Aligned_cols=219 Identities=26% Similarity=0.361 Sum_probs=191.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 35789999999999999999999999999999999999999888888887666788899999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEY--SAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+++|++|||||......+.+. +.+++++++++|+.+++.+++.++|+|++++.++||++||..+..+.++...|++|
T Consensus 447 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 525 (657)
T PRK07201 447 -GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVAS 525 (657)
T ss_pred -CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHH
Confidence 689999999997554444332 35889999999999999999999999998888999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
|+++++|+++++.|+.++||+|++|+||+++|+|...... .......+|+++|+.++..+..
T Consensus 526 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----------~~~~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 526 KAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----------YNNVPTISPEEAADMVVRAIVE 587 (657)
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----------ccCCCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998642210 1122356899999999887653
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-32 Score=225.82 Aligned_cols=226 Identities=27% Similarity=0.389 Sum_probs=193.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+.+++++||||+|+||++++++|+++|++|++++|+.++..+..+++... .++..+.+|+++.++++++++++.+.+
T Consensus 3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (237)
T PRK07326 3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF- 80 (237)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 456899999999999999999999999999999999998888777776543 568889999999999999999998888
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|+||||+|.....++.+.+.+++++++++|+.+++.+++++++.|+ ++.++||++||..+..+..+...|+++|++
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a 159 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNFFAGGAAYNASKFG 159 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhccCCCCCchHHHHHHH
Confidence 6899999999987777778889999999999999999999999999994 445899999999888888888999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
++++++.++.++...|+++++++||++.|++....... . .....+++|+++.+++++......+.++..
T Consensus 160 ~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~-~----------~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~ 228 (237)
T PRK07326 160 LVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSE-K----------DAWKIQPEDIAQLVLDLLKMPPRTLPSKIE 228 (237)
T ss_pred HHHHHHHHHHHhcccCcEEEEEeeccccCcccccccch-h----------hhccCCHHHHHHHHHHHHhCCccccccceE
Confidence 99999999999999999999999999999875432110 0 111358999999999999866555544443
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=217.55 Aligned_cols=224 Identities=25% Similarity=0.280 Sum_probs=182.6
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEE-EeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-
Q 024125 17 GMTALVTGGTRGIGQATVEELAGL-GAVVH-TCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN- 93 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~-G~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 93 (272)
-|.++||||.+|||..++++|++. |..++ .+.|+.+...+..++......+++.++.|++..+++..+++++.+--+
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 356999999999999999999976 55554 456667776444444444467899999999999999999999988742
Q ss_pred CCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-----------CeEEEecCCCCCC--
Q 024125 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-----------GSIVFISSVGGLS-- 159 (272)
Q Consensus 94 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-----------g~ii~vsS~~~~~-- 159 (272)
..+|++|||||+. ......+.+.+.|.+.+++|..|++.++|+++|++++... +.|||+||..+..
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~ 162 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG 162 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence 3699999999984 3445556778899999999999999999999999987542 4899999876543
Q ss_pred -CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024125 160 -HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 160 -~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~ 238 (272)
...+..+|.+||+|+++|+|+++-||++.+|-|..+|||||.|+|... ....+|||-+..++
T Consensus 163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~-----------------~a~ltveeSts~l~ 225 (249)
T KOG1611|consen 163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK-----------------KAALTVEESTSKLL 225 (249)
T ss_pred CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC-----------------CcccchhhhHHHHH
Confidence 245568999999999999999999999999999999999999999642 12347888888887
Q ss_pred HHhcCCCCCccccEEEeCC
Q 024125 239 YLCLPAASYITGQIISVDG 257 (272)
Q Consensus 239 ~l~~~~~~~~~G~~i~~dg 257 (272)
.-...-...-+|.+++.|+
T Consensus 226 ~~i~kL~~~hnG~ffn~dl 244 (249)
T KOG1611|consen 226 ASINKLKNEHNGGFFNRDG 244 (249)
T ss_pred HHHHhcCcccCcceEccCC
Confidence 7776666667899998876
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=220.73 Aligned_cols=186 Identities=24% Similarity=0.350 Sum_probs=169.9
Q ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGT-RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~-~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+.|+|||||++ ||||.++++.|++.|+.|+.+.|+.+...++..+. .+.....|+++++++..+..++.+...|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~G 80 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDG 80 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence 56889998876 78999999999999999999999999888776543 3667789999999999999999985448
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|+++||||.....|..+.+.++.++.|++|++|.+++++++...+.+.+ |+|||++|..+..+.+..+.|++||+|+
T Consensus 81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf~~iYsAsKAAi 159 (289)
T KOG1209|consen 81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPFGSIYSASKAAI 159 (289)
T ss_pred ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccchhhhhhHHHHHH
Confidence 999999999998888999999999999999999999999999996655544 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHh
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~ 207 (272)
+.+++.|+.||+++||+|..+.||.|.|++..+
T Consensus 160 hay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 160 HAYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred HHhhhhcEEeeeccccEEEEecccceecccccC
Confidence 999999999999999999999999999998755
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-32 Score=225.71 Aligned_cols=204 Identities=18% Similarity=0.222 Sum_probs=172.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++++||||++|||++++++|+++|++|++++|+.++++++.++ ..++.++.+|+++.++++++++++. ..+|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~----~~~d 73 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLP----FIPE 73 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhcc----cCCC
Confidence 7899999999999999999999999999999998776655432 2357788999999999999988763 3579
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
.+|||||.....+..+.+.++|++++++|+.+++++++++.|+|++. ++||++||..+..+.++...|+++|+++++|
T Consensus 74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 151 (240)
T PRK06101 74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCG--HRVVIVGSIASELALPRAEAYGASKAAVAYF 151 (240)
T ss_pred EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence 99999986544444557889999999999999999999999999643 6899999999888888999999999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
+++++.|+.++||+++++.||++.|++..... .......+|+++++.++..+..
T Consensus 152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~i~~ 205 (240)
T PRK06101 152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT------------FAMPMIITVEQASQEIRAQLAR 205 (240)
T ss_pred HHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC------------CCCCcccCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999854321 1112246899999999877754
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-31 Score=221.76 Aligned_cols=218 Identities=22% Similarity=0.261 Sum_probs=181.5
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++|||||+||||++++++|+++|++|++++|+.+..+++.+.....+.++.++.+|++|.++++++++ +++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCC
Confidence 5899999999999999999999999999999999887777766665556678888999999998877653 479
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|+||||||.....++.+.+.+++++.+++|+.+++.+++.+++.+.+++.++||++||..+..+.++...|+++|++++.
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~ 154 (257)
T PRK09291 75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEA 154 (257)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHH
Confidence 99999999887788888999999999999999999999999999988877899999999888888888999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH--------HHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK--------EFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+++.++.++.+.||++++++||++.|++........ ..........+. ...+++++++.+..++.
T Consensus 155 ~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 227 (257)
T PRK09291 155 IAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIP 227 (257)
T ss_pred HHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999998754322110 011101111222 23589999888887764
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=229.14 Aligned_cols=205 Identities=25% Similarity=0.298 Sum_probs=167.5
Q ss_pred HHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCC
Q 024125 33 TVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI 112 (272)
Q Consensus 33 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~ 112 (272)
++++|+++|++|++++|+.++.+. ..++++|++|.++++++++++. +++|+||||||....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~~---- 61 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPGT---- 61 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCCC----
Confidence 478999999999999998765421 1246899999999999988763 579999999997421
Q ss_pred CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC---------------------------CCCCCh
Q 024125 113 EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---------------------------HVGSGS 165 (272)
Q Consensus 113 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~---------------------------~~~~~~ 165 (272)
+.+++++++|+.+++.+++.++|+|++. |+||++||..+.. +.++..
T Consensus 62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
T PRK12428 62 ----APVELVARVNFLGLRHLTEALLPRMAPG--GAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT 135 (241)
T ss_pred ----CCHHHhhhhchHHHHHHHHHHHHhccCC--cEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence 2478999999999999999999999643 8999999988752 456678
Q ss_pred hhHHHHHHHHHHHHHHH-HHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 166 IYGATKAAMNQLTRNLA-CEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la-~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
.|++||+++++++++++ .+++++||+||+|+||+++|+|.....+............|.+++.+|+|+|+.+.+|+++.
T Consensus 136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~ 215 (241)
T PRK12428 136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDA 215 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChh
Confidence 99999999999999999 99999999999999999999997653221110001112357788899999999999999988
Q ss_pred CCCccccEEEeCCCcCCC
Q 024125 245 ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~ 262 (272)
..+++|+.+.+|||+...
T Consensus 216 ~~~~~G~~i~vdgg~~~~ 233 (241)
T PRK12428 216 ARWINGVNLPVDGGLAAT 233 (241)
T ss_pred hcCccCcEEEecCchHHH
Confidence 899999999999997544
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=212.44 Aligned_cols=163 Identities=36% Similarity=0.509 Sum_probs=153.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC--hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN--EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
|++|||||++|||++++++|+++|+ .|++++|+ .+..+++.+++...+.++.++++|+++.++++++++++.+.+ +
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence 7899999999999999999999966 78899999 788888888888888899999999999999999999999888 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|++|||||.....++.+.+.++|+++|++|+.+++.+.++++| ++.++||++||..+..+.+....|+++|+|+
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal 155 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAAL 155 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHH
Confidence 999999999998888999999999999999999999999999999 3468999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 024125 175 NQLTRNLACEW 185 (272)
Q Consensus 175 ~~~~~~la~el 185 (272)
++|++++++|+
T Consensus 156 ~~~~~~la~e~ 166 (167)
T PF00106_consen 156 RGLTQSLAAEL 166 (167)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999996
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-31 Score=222.46 Aligned_cols=224 Identities=24% Similarity=0.271 Sum_probs=185.3
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|+++||||+|+||+++++.|+++|++|++++|+.++++... .. .+..+.+|+++.++++++++.+.+..++++|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 78999999999999999999999999999999987765443 22 3567789999999999999988876545799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
.++||+|.....++.+.+.+++++.+++|+.|++.+++.++|.|++.+.++||++||..+..+.+....|+++|++++.+
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~ 156 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAW 156 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHH
Confidence 99999998766777788999999999999999999999999999888778999999998888888899999999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+++++.++.+.++++++++||.++|++......................+.+|+|+++.+..++......
T Consensus 157 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~ 226 (256)
T PRK08017 157 SDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPK 226 (256)
T ss_pred HHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999887654221110000000001123578999999999999755443
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-30 Score=218.04 Aligned_cols=205 Identities=29% Similarity=0.330 Sum_probs=177.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
|++.++++|||||+|+||++++++|+++|+ +|++++|+.++.++ .+.++.++.+|+++.++++++++..
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~--- 71 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAA--- 71 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhc---
Confidence 567899999999999999999999999999 99999998776543 3346888899999999988877653
Q ss_pred cCCCccEEEECCCC-CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+++|++||+||. ....++.+.+.+++++.+++|+.+++.+++++.|.+++.+.+++|++||..+..+.++...|+.+
T Consensus 72 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~s 149 (238)
T PRK08264 72 --SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSAS 149 (238)
T ss_pred --CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHH
Confidence 579999999998 56667778899999999999999999999999999988878999999999988888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
|++++.+++.++.++.+++++++++.||.++|++..... ....+++++++.++..+...
T Consensus 150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~---------------~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD---------------APKASPADVARQILDALEAG 208 (238)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC---------------cCCCCHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999854321 11457788888887776543
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-30 Score=216.57 Aligned_cols=215 Identities=22% Similarity=0.262 Sum_probs=171.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|+++|||+++|||++++++|+++|++|++++|+.+..+++.+ + .++.+..+|++|.++++++++++.+ +++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~----~~~~~~~~D~~d~~~~~~~~~~~~~---~~id 73 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L----PGVHIEKLDMNDPASLDQLLQRLQG---QRFD 73 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c----cccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence 789999999999999999999999999999998876554322 1 2456778999999999999988753 4799
Q ss_pred EEEECCCCCCC--CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC---CCCChhhHHHHH
Q 024125 98 ILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---VGSGSIYGATKA 172 (272)
Q Consensus 98 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~---~~~~~~Y~~sK~ 172 (272)
++|||||.... .++.+.+.+++++.+++|+.+++.++++++|+|++. .++++++||..+..+ ..+...|+++|+
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~ 152 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKA 152 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHH
Confidence 99999998532 456678899999999999999999999999998754 379999999776543 335678999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
+++.|+++++.|+.+++|+|++|+||+++|++.... ...++++.++.++.++.....-.++.+
T Consensus 153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (225)
T PRK08177 153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN-----------------APLDVETSVKGLVEQIEAASGKGGHRF 215 (225)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC-----------------CCCCHHHHHHHHHHHHHhCCccCCCce
Confidence 999999999999999999999999999999985321 013677777777777654333233333
Q ss_pred EEeCCC
Q 024125 253 ISVDGG 258 (272)
Q Consensus 253 i~~dgG 258 (272)
+.++|.
T Consensus 216 ~~~~~~ 221 (225)
T PRK08177 216 IDYQGE 221 (225)
T ss_pred eCcCCc
Confidence 444544
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.6e-31 Score=217.88 Aligned_cols=221 Identities=25% Similarity=0.204 Sum_probs=193.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+.++|||+++|||+++|..+..+|++|.++.|+..++.+.+++++-. ..+|.+..+|++|.+++..+++++.+.. ++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CC
Confidence 79999999999999999999999999999999999999999888643 3347888999999999999999998887 69
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
+|.++||||...++.+.+.+.++++..+++|+.++++.+++.++.|++.. .|+|+.+||..+..+..++++|+++|+|+
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al 192 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL 192 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999876 68999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
.++++.+++|+.++||+|..+.|+.++||.+..-...++....+.+ .......+||+|+.++-=+
T Consensus 193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~--g~ss~~~~e~~a~~~~~~~ 257 (331)
T KOG1210|consen 193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIE--GGSSVIKCEEMAKAIVKGM 257 (331)
T ss_pred HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeec--CCCCCcCHHHHHHHHHhHH
Confidence 9999999999999999999999999999976543322222222211 1223357899999986444
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-31 Score=219.74 Aligned_cols=210 Identities=32% Similarity=0.367 Sum_probs=180.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHH-HHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQR-EKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~-~~~~~~~~~~~~ 93 (272)
-|++++|||||.|||++.|++|+++|.+|++++|+++++++.++++.+. +..+..+.+|.++.+.+ +++.+.+ +.
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l-~~-- 124 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKL-AG-- 124 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHh-cC--
Confidence 4699999999999999999999999999999999999999999999765 67889999999988763 3333332 22
Q ss_pred CCccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 94 GKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 94 ~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
..+-++|||+|... +..+.+.+.+.+++.+++|..+...+++.++|.|.+++.|.|+|+||.++..+.|.++.|+++|
T Consensus 125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK 204 (312)
T KOG1014|consen 125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASK 204 (312)
T ss_pred CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHH
Confidence 25889999999865 6777888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
+.++.|+++|+.|+..+||.|-++.|.+|-|+|...-. +.-...+|+..++..+.-.
T Consensus 205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~-------------~sl~~ps~~tfaksal~ti 261 (312)
T KOG1014|consen 205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK-------------PSLFVPSPETFAKSALNTI 261 (312)
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC-------------CCCcCcCHHHHHHHHHhhc
Confidence 99999999999999999999999999999999965322 2223346666666655443
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=211.37 Aligned_cols=205 Identities=16% Similarity=0.157 Sum_probs=153.9
Q ss_pred CCcccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHH
Q 024125 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (272)
Q Consensus 1 ~~~~~~~~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 80 (272)
||...++ +...+++|+++||||+||||++++++|+++|++|++++|+.+...+. . . ... ...+.+|+++.++
T Consensus 1 ~~~~~~~---~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~-~-~~~-~~~~~~D~~~~~~ 72 (245)
T PRK12367 1 MPQADPM---AQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--N-D-ESP-NEWIKWECGKEES 72 (245)
T ss_pred CCCcchh---hHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--h-c-cCC-CeEEEeeCCCHHH
Confidence 4444443 34567899999999999999999999999999999999986321111 1 1 111 2467899999988
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC---CCCeEEEecCCCC
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS---GVGSIVFISSVGG 157 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~g~ii~vsS~~~ 157 (272)
+++. + +++|++|||||.... .+.+.+++++++++|+.+++.++++++|.|.++ +.+.+++.+|..+
T Consensus 73 ~~~~-------~-~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~ 141 (245)
T PRK12367 73 LDKQ-------L-ASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAE 141 (245)
T ss_pred HHHh-------c-CCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccc
Confidence 7643 3 689999999997432 346789999999999999999999999999763 2234444456555
Q ss_pred CCCCCCChhhHHHHHHHHHHH---HHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHH
Q 024125 158 LSHVGSGSIYGATKAAMNQLT---RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVA 234 (272)
Q Consensus 158 ~~~~~~~~~Y~~sK~a~~~~~---~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a 234 (272)
..+ +....|++||+|+..+. +.++.|+...+++|+.+.||+++|++.. ....+|+|+|
T Consensus 142 ~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~------------------~~~~~~~~vA 202 (245)
T PRK12367 142 IQP-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP------------------IGIMSADFVA 202 (245)
T ss_pred cCC-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc------------------cCCCCHHHHH
Confidence 544 45678999999986554 3444455778999999999999998721 1145899999
Q ss_pred HHHHHHhcC
Q 024125 235 SLVAYLCLP 243 (272)
Q Consensus 235 ~~~~~l~~~ 243 (272)
+.+++.+..
T Consensus 203 ~~i~~~~~~ 211 (245)
T PRK12367 203 KQILDQANL 211 (245)
T ss_pred HHHHHHHhc
Confidence 999999864
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=208.80 Aligned_cols=236 Identities=22% Similarity=0.183 Sum_probs=186.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+|++|+||+++|||..++..+...+.++...++++...+ ........+........|++...-..++++..+++. +.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~-gk 82 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG-GK 82 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC-Cc
Confidence 5788999999999999988888887765444443332222 111111112233334567777777788887777776 68
Q ss_pred ccEEEECCCCCCC-CCC--CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 96 LNILVNNVGTNIR-KPT--IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 96 id~li~~ag~~~~-~~~--~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
.|+||||||...+ ... ...+.++|++.|+.|+++.+.+.+.++|.+++.+ .+.++|+||.+...++..+..||++|
T Consensus 83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~K 162 (253)
T KOG1204|consen 83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSK 162 (253)
T ss_pred eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhH
Confidence 9999999997433 222 3578899999999999999999999999999885 68999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+|.++|.+.+|.|-. ++|+|.++.||.++|+|.....+. ++....+......++..+|...++.+..|+.... +
T Consensus 163 aAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-f 240 (253)
T KOG1204|consen 163 AARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-F 240 (253)
T ss_pred HHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-c
Confidence 999999999999965 799999999999999998766543 5566667777788999999999999999985322 8
Q ss_pred ccccEEEe
Q 024125 248 ITGQIISV 255 (272)
Q Consensus 248 ~~G~~i~~ 255 (272)
.+|+++..
T Consensus 241 ~sG~~vdy 248 (253)
T KOG1204|consen 241 VSGQHVDY 248 (253)
T ss_pred cccccccc
Confidence 88888753
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-29 Score=205.71 Aligned_cols=213 Identities=22% Similarity=0.267 Sum_probs=174.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|+++|||++++||++++++|+++|++|++++|+.+..+++.. . .+.++.+|+++.++++++++++.. +++|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~--~~~~~~~D~~~~~~v~~~~~~~~~---~~~d 72 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L--GAEALALDVADPASVAGLAWKLDG---EALD 72 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c--cceEEEecCCCHHHHHHHHHHhcC---CCCC
Confidence 689999999999999999999999999999999876654432 2 245789999999999998876632 4799
Q ss_pred EEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC---hhhHHHHH
Q 024125 98 ILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG---SIYGATKA 172 (272)
Q Consensus 98 ~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~---~~Y~~sK~ 172 (272)
++|||+|... ..+..+.+.+++++.+++|+.+++.++++++|+|.+. .++++++||..+..+.... ..|+++|+
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~ 151 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKA 151 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHH
Confidence 9999999752 3455667899999999999999999999999998664 4799999998765543222 35999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
+++.+++.++.++ .+++|++++||+++|++... ....++++.++.++.++.+.....+|++
T Consensus 152 a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (222)
T PRK06953 152 ALNDALRAASLQA--RHATCIALHPGWVRTDMGGA-----------------QAALDPAQSVAGMRRVIAQATRRDNGRF 212 (222)
T ss_pred HHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCC-----------------CCCCCHHHHHHHHHHHHHhcCcccCceE
Confidence 9999999999986 37999999999999998531 1134788999999988776677888999
Q ss_pred EEeCCCc
Q 024125 253 ISVDGGF 259 (272)
Q Consensus 253 i~~dgG~ 259 (272)
+..|+..
T Consensus 213 ~~~~~~~ 219 (222)
T PRK06953 213 FQYDGVE 219 (222)
T ss_pred EeeCCcC
Confidence 9988763
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-28 Score=201.56 Aligned_cols=219 Identities=28% Similarity=0.366 Sum_probs=181.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.|++|||||+|+||+++++.|+++ ++|++++|+.++.+++.++. ..+.++.+|++|.++++++++++ +++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~-----~~i 72 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL-----GRL 72 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc-----CCC
Confidence 489999999999999999999999 99999999987766554432 24667899999999988888654 479
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|+|||++|.....++.+.+.+++.+.+++|+.+++.+++.+++.++++. +++|++||..+..+.++...|+.+|++++.
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~ 151 (227)
T PRK08219 73 DVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPGWGSYAASKFALRA 151 (227)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence 9999999987667777888999999999999999999999999998764 799999999988888889999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeC
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVD 256 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~d 256 (272)
+++.++.++... ++++++.||+++|++........ ....+...+.+++|+++.++++++... .|.+..+.
T Consensus 152 ~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~------~~~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~~~~ 221 (227)
T PRK08219 152 LADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE------GGEYDPERYLRPETVAKAVRFAVDAPP---DAHITEVV 221 (227)
T ss_pred HHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh------ccccCCCCCCCHHHHHHHHHHHHcCCC---CCccceEE
Confidence 999999998766 99999999999998765432111 112334567899999999999996433 35555443
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-26 Score=204.08 Aligned_cols=198 Identities=24% Similarity=0.240 Sum_probs=153.8
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++++|+++||||+||||++++++|+++|++|++++|+.+++++.. ......+..+.+|++|.+++.+.+
T Consensus 173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~~~v~~v~~Dvsd~~~v~~~l------ 243 (406)
T PRK07424 173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGEDLPVKTLHWQVGQEAALAELL------ 243 (406)
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcCCCeEEEEeeCCCHHHHHHHh------
Confidence 35678999999999999999999999999999999999877654332 222234667889999998876544
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC----CeEEEecCCCCCCCCCCChhh
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV----GSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++|++|||||.... .+.+.+++++++++|+.+++.++++++|.|++++. +.++++|+ +. ...+..+.|
T Consensus 244 --~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y 316 (406)
T PRK07424 244 --EKVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLY 316 (406)
T ss_pred --CCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHH
Confidence 579999999997532 35688999999999999999999999999987642 34666665 33 333455789
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
++||+|+..|++ ++++ ..++.+..+.||+++|++. +. ...+||++|+.+++.+.....
T Consensus 317 ~ASKaAl~~l~~-l~~~--~~~~~I~~i~~gp~~t~~~-----------------~~-~~~spe~vA~~il~~i~~~~~ 374 (406)
T PRK07424 317 ELSKRALGDLVT-LRRL--DAPCVVRKLILGPFKSNLN-----------------PI-GVMSADWVAKQILKLAKRDFR 374 (406)
T ss_pred HHHHHHHHHHHH-HHHh--CCCCceEEEEeCCCcCCCC-----------------cC-CCCCHHHHHHHHHHHHHCCCC
Confidence 999999999984 4444 2467778888999988762 11 135899999999999976544
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-25 Score=228.22 Aligned_cols=183 Identities=17% Similarity=0.186 Sum_probs=159.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCCh-------------------------------------------
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNE------------------------------------------- 51 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~------------------------------------------- 51 (272)
+++++|||||++|||.+++++|+++ |++|++++|+.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5899999999999999999999998 69999999982
Q ss_pred ----HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHh
Q 024125 52 ----VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127 (272)
Q Consensus 52 ----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~ 127 (272)
....+.++.+.+.+.++.++.+|++|.++++++++++.+. +++|+||||||+.....+.+.+.++|+++|++|+
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence 1112233444555778889999999999999999999876 4799999999998778889999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH
Q 024125 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (272)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~ 206 (272)
.|.+++++++.+.+ .++||++||..+..+.++...|+++|++++.+++.++.++. +++|++|+||+++|+|..
T Consensus 2154 ~G~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2154 DGLLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred HHHHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence 99999998886543 25799999999999999999999999999999999999874 489999999999999863
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=171.65 Aligned_cols=175 Identities=21% Similarity=0.272 Sum_probs=149.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHH---HHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKC---LKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
|+++||||+++||++++++|+++|+ .|++++|+.+..+.. .++++..+.++.++.+|+++.++++++++++.+.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL- 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 5799999999999999999999997 688888876543322 24455556788889999999999999999998888
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|.+||++|.....++.+.+.+++++++++|+.+++.+++.+ .+.+.++++++||..+..+.++...|+++|++
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~ 155 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELT----RDLPLDFFVLFSSVAGVLGNPGQANYAAANAF 155 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHh----ccCCcceEEEEccHHHhcCCCCchhhHHHHHH
Confidence 68999999999877677788899999999999999999999987 33455899999999988888899999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCccc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~ 201 (272)
++.+++.++. .++++.++.||++.
T Consensus 156 ~~~~~~~~~~----~~~~~~~~~~g~~~ 179 (180)
T smart00822 156 LDALAAHRRA----RGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHHh----cCCceEEEeecccc
Confidence 9998876644 58889999999874
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-24 Score=193.70 Aligned_cols=220 Identities=17% Similarity=0.169 Sum_probs=165.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC---------CCeEEEEEecCCCHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK---------GFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~ 85 (272)
.+||++|||||+|+||++++++|+++|++|++++|+.++++.+.+++... ..++.++.+|+++.+++++.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 47899999999999999999999999999999999998887776655431 135788999999998876644
Q ss_pred HHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCC
Q 024125 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSG 164 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~ 164 (272)
+++|+||||+|.... ...++...+++|+.+..++++++. +.+.++||++||..+. .+.+.
T Consensus 158 --------ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~VSSiga~~~g~p~- 218 (576)
T PLN03209 158 --------GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFILVTSLGTNKVGFPA- 218 (576)
T ss_pred --------cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEEEccchhcccCccc-
Confidence 579999999996421 122467889999999998888874 3456899999998763 22222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
..|. +|+++..+.+.+..++...||+++.|+||++.|++.... .... ........+.++..+.+|+|+.+++++++.
T Consensus 219 ~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t~~-v~~~~~d~~~gr~isreDVA~vVvfLasd~ 295 (576)
T PLN03209 219 AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ETHN-LTLSEEDTLFGGQVSNLQVAELMACMAKNR 295 (576)
T ss_pred cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-cccc-eeeccccccCCCccCHHHHHHHHHHHHcCc
Confidence 2344 788888888999999999999999999999988764321 0111 111122345677789999999999999843
Q ss_pred -CCCccccEEEeCCC
Q 024125 245 -ASYITGQIISVDGG 258 (272)
Q Consensus 245 -~~~~~G~~i~~dgG 258 (272)
..+ ++++.+-++
T Consensus 296 ~as~--~kvvevi~~ 308 (576)
T PLN03209 296 RLSY--CKVVEVIAE 308 (576)
T ss_pred hhcc--ceEEEEEeC
Confidence 344 666665554
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=184.01 Aligned_cols=216 Identities=18% Similarity=0.159 Sum_probs=157.4
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++|||||+|+||++++++|+++| ++|++++|+.....++.+.+. ..++.++.+|++|.+++.+++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~------- 72 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRAL------- 72 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHH-------
Confidence 468999999999999999999999986 689999988765544433332 246788899999999887776
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
..+|+|||+||.... +..+.+ .++.+++|+.+++++++++.+ .+.++||++||..... +...|++||+
T Consensus 73 -~~iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~---p~~~Y~~sK~ 140 (324)
T TIGR03589 73 -RGVDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAAN---PINLYGATKL 140 (324)
T ss_pred -hcCCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCC---CCCHHHHHHH
Confidence 358999999996432 222223 357899999999999998854 4557999999976543 3467999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhc---CC------CCCCCCHHHHHHHHHHHhcC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR---TP------LQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~e~a~~~~~l~~~ 243 (272)
+.+.+++.++.++...|+++++++||.+.++... +. +.+....... .+ ...+..++|++++++.++..
T Consensus 141 ~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~i--~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~ 217 (324)
T TIGR03589 141 ASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-VV--PFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER 217 (324)
T ss_pred HHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-cH--HHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence 9999999998888888999999999999875311 11 1111111111 11 12357899999999888753
Q ss_pred CCCCccccEEEeCCC
Q 024125 244 AASYITGQIISVDGG 258 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG 258 (272)
. ..|+.+ +..|
T Consensus 218 ~---~~~~~~-~~~~ 228 (324)
T TIGR03589 218 M---LGGEIF-VPKI 228 (324)
T ss_pred C---CCCCEE-ccCC
Confidence 2 135655 3443
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-22 Score=176.16 Aligned_cols=228 Identities=17% Similarity=0.079 Sum_probs=162.4
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++||++|||||+|+||+++++.|+++|++|++++|+.+........+. ...++.++.+|+++.+++.+++++.
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~------ 74 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF------ 74 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc------
Confidence 468999999999999999999999999999999988765443333332 1235667889999999998888752
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC------------CCC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------HVG 162 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~------------~~~ 162 (272)
++|+|||+|+.... ..+.+++...+++|+.+++++++++.+ ....+++|++||...+. +..
T Consensus 75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~ 147 (349)
T TIGR02622 75 KPEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRA---IGSVKAVVNVTSDKCYRNDEWVWGYRETDPLG 147 (349)
T ss_pred CCCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHh---cCCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence 58999999995322 234466778999999999999998732 12246999999964321 123
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHcc----CCeeEEEeeCCcccChhhH---hhhhCHHHHHHHHhc--------CCCCCC
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAK----DNIRTNSVAPWYTKTSLVE---RLLENKEFVDKVIAR--------TPLQRV 227 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~----~~i~v~~v~PG~v~t~~~~---~~~~~~~~~~~~~~~--------~~~~~~ 227 (272)
+..+|+++|.+.+.+++.++.++.+ ++++++.+.|+.+..+... .+. +......... .....+
T Consensus 148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~--~~~~~~~~~g~~~~~~~g~~~rd~ 225 (349)
T TIGR02622 148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLI--PDVIRAFSSNKIVIIRNPDATRPW 225 (349)
T ss_pred CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhh--HHHHHHHhcCCCeEECCCCcccce
Confidence 4578999999999999999998855 4899999999988875321 111 1222222221 122344
Q ss_pred CCHHHHHHHHHHHhcCC--CCCccccEEEeCCC
Q 024125 228 GEPEEVASLVAYLCLPA--ASYITGQIISVDGG 258 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~--~~~~~G~~i~~dgG 258 (272)
...+|++++++.++... .....|+.+++.+|
T Consensus 226 i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~ 258 (349)
T TIGR02622 226 QHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR 258 (349)
T ss_pred eeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence 66889999988776421 11123678888764
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-22 Score=173.85 Aligned_cols=222 Identities=13% Similarity=0.099 Sum_probs=158.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++|++|||||+|+||++++++|+++|++|++++|+.+............ ..++.++.+|+++.+++++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------- 75 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI-------- 75 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH--------
Confidence 5799999999999999999999999999999888876554433222211 246788899999999888777
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC-----------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG----------- 162 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~----------- 162 (272)
.++|+||||||.... ..+.+.+.+.+++|+.+++++++++.+.+ +.++||++||..+..+..
T Consensus 76 ~~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E 148 (325)
T PLN02989 76 DGCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDE 148 (325)
T ss_pred cCCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCc
Confidence 358999999996422 22345578899999999999999987643 246999999976542210
Q ss_pred -----------CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhc-CCC----C
Q 024125 163 -----------SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIAR-TPL----Q 225 (272)
Q Consensus 163 -----------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~-~~~----~ 225 (272)
....|+.||.+.+.+++.+++++ ++.++.+.|+.+..+....... ....+...... .+. .
T Consensus 149 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r 225 (325)
T PLN02989 149 TFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHH 225 (325)
T ss_pred CCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCc
Confidence 02469999999999999887764 7899999999988876432110 11222222222 222 3
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 226 RVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 226 ~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
.+..++|++++++.++.... . +..++++|+
T Consensus 226 ~~i~v~Dva~a~~~~l~~~~--~-~~~~ni~~~ 255 (325)
T PLN02989 226 RFVDVRDVALAHVKALETPS--A-NGRYIIDGP 255 (325)
T ss_pred CeeEHHHHHHHHHHHhcCcc--c-CceEEEecC
Confidence 45678999999988875322 2 346788544
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-23 Score=166.48 Aligned_cols=193 Identities=20% Similarity=0.206 Sum_probs=167.5
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-----EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA-----VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~-----~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.|++||||++||||.+|+..|++... ++++++|+.++.++.+..+.+. ..++..+..|+++..++.++.++
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 48999999999999999999998754 4778899999999999888654 45788899999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCC---------------------------CCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIE---------------------------YSAEEYSKIMTTNFESTYHLCQLVYPL 140 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~---------------------------~~~~~~~~~~~~N~~~~~~l~~~~~~~ 140 (272)
+.++| .++|.|+.|||+.....+.. .+.|++..+|+.||+|++.+.+.+.|+
T Consensus 83 i~~rf-~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 83 IKQRF-QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHh-hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 99999 79999999999865443321 256678899999999999999999999
Q ss_pred HHcCCCCeEEEecCCCCCC---------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh
Q 024125 141 LKASGVGSIVFISSVGGLS---------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE 210 (272)
Q Consensus 141 ~~~~~~g~ii~vsS~~~~~---------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~ 210 (272)
+-..+...+|.+||..+.. ...+..+|..||.+.+-+.-.+-+.+.+.|+.-.+++||...|.+...+..
T Consensus 162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~ 240 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN 240 (341)
T ss_pred hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence 9877777999999987643 456778999999999999999999999999999999999999999876654
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-21 Score=166.33 Aligned_cols=220 Identities=15% Similarity=0.078 Sum_probs=158.1
Q ss_pred CCCCEEEEeCCCChHHHH--HHHHHHHCCCEEEEeeCChHHH------------HHHHHHHHhCCCeEEEEEecCCCHHH
Q 024125 15 LKGMTALVTGGTRGIGQA--TVEELAGLGAVVHTCSRNEVEL------------NKCLKEWQSKGFVVSGSVCDAASPDQ 80 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~--ia~~l~~~G~~v~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~D~~~~~~ 80 (272)
--+|++||||+++|||.+ +++.| +.|++|+++++..+.. +.+.+.+...+..+..+.+|+++.++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 347999999999999999 89999 9999988887533221 23344445556667788999999999
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCCCCCC-----------------CC-----------------CCCHHHHHHHHHHH
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKP-----------------TI-----------------EYSAEEYSKIMTTN 126 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~N 126 (272)
++++++++.+.+ +++|+||||++...... +. ..+.++++.++.+.
T Consensus 118 v~~lie~I~e~~-G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vM 196 (398)
T PRK13656 118 KQKVIELIKQDL-GQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVM 196 (398)
T ss_pred HHHHHHHHHHhc-CCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhh
Confidence 999999999999 79999999999753321 11 23455666655543
Q ss_pred hH-HHHHHHHH--HHHHHHcCCCCeEEEecCCCCCCCCCCC--hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCccc
Q 024125 127 FE-STYHLCQL--VYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (272)
Q Consensus 127 ~~-~~~~l~~~--~~~~~~~~~~g~ii~vsS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~ 201 (272)
=. ....++++ ..+.|. ++++++-.|.+.+....|.+ ...+.+|++|+..++.++.+|++.|+|+|++.+|.+.
T Consensus 197 ggedw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~ 274 (398)
T PRK13656 197 GGEDWELWIDALDEAGVLA--EGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVV 274 (398)
T ss_pred ccchHHHHHHHHHhccccc--CCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCccc
Confidence 22 11333333 344443 44899999998887777666 4889999999999999999999999999999999999
Q ss_pred ChhhHhhhhCHHHHHHHHhc-CCCC-CCCCHHHHHHHHH
Q 024125 202 TSLVERLLENKEFVDKVIAR-TPLQ-RVGEPEEVASLVA 238 (272)
Q Consensus 202 t~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~e~a~~~~ 238 (272)
|.....+..-+-++..+..- ...+ .-++.+++.+...
T Consensus 275 T~Ass~Ip~~~ly~~~l~kvmk~~g~he~~ieq~~rl~~ 313 (398)
T PRK13656 275 TQASSAIPVMPLYISLLFKVMKEKGTHEGCIEQIYRLFS 313 (398)
T ss_pred chhhhcCCCcHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Confidence 98877665444433322221 1111 2245666666664
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.3e-22 Score=158.33 Aligned_cols=173 Identities=21% Similarity=0.344 Sum_probs=138.0
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++||||+.||||..+++.|+++|. +|++++|+. ....+..+++++.+.++...++|++|+++++++++++.+.+ +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-G 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-S
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-C
Confidence 789999999999999999999987 899999982 34456778888888999999999999999999999999988 7
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
+++.|||+||.....++.+.+.++++.++...+.+..++.+.+ ...+...+|.+||+.+..+.++...|+++.+.+
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~----~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~l 156 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEAL----ENRPLDFFILFSSISSLLGGPGQSAYAAANAFL 156 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHH----TTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHH
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHh----hcCCCCeEEEECChhHhccCcchHhHHHHHHHH
Confidence 9999999999988888999999999999999999999998877 445667999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcc
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYT 200 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v 200 (272)
+.|++..+. .+..+.+|..|..
T Consensus 157 da~a~~~~~----~g~~~~sI~wg~W 178 (181)
T PF08659_consen 157 DALARQRRS----RGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHHHHH----TTSEEEEEEE-EB
T ss_pred HHHHHHHHh----CCCCEEEEEcccc
Confidence 998876544 3677888887754
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=8e-22 Score=173.41 Aligned_cols=232 Identities=15% Similarity=0.052 Sum_probs=156.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
++++|++|||||+|+||++++++|+++|++|++++|+.+. ++.+.......+.++.++.+|++|.+++.++++..
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 5778999999999999999999999999999999886542 22121111112345788899999999998888753
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCC--------
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS-------- 159 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~-------- 159 (272)
.+|+|||||+..... ...+..+..+++|+.++.++++++.+...+++ .-++|++||...+.
T Consensus 83 ------~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E 152 (340)
T PLN02653 83 ------KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSE 152 (340)
T ss_pred ------CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCC
Confidence 589999999974332 12344577889999999999999987654331 12788888753222
Q ss_pred --CCCCChhhHHHHHHHHHHHHHHHHHHcc---CCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhc----------CCC
Q 024125 160 --HVGSGSIYGATKAAMNQLTRNLACEWAK---DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR----------TPL 224 (272)
Q Consensus 160 --~~~~~~~Y~~sK~a~~~~~~~la~el~~---~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~----------~~~ 224 (272)
+..+...|+.||.+.+.+++.++.+++- .++.++.+.|+...+-+...+ .......... ...
T Consensus 153 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~g~~~ 229 (340)
T PLN02653 153 TTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI---TRAVGRIKVGLQKKLFLGNLDAS 229 (340)
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHH---HHHHHHHHcCCCCceEeCCCcce
Confidence 1224568999999999999999988743 234455666764432111111 0111111111 112
Q ss_pred CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 225 QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 225 ~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..+..++|++++++.++... .+..+++.+|..++
T Consensus 230 rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~s 263 (340)
T PLN02653 230 RDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESHT 263 (340)
T ss_pred ecceeHHHHHHHHHHHHhcC----CCCcEEecCCCcee
Confidence 35578999999999888532 14568888886544
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=8e-21 Score=165.84 Aligned_cols=223 Identities=15% Similarity=0.107 Sum_probs=155.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh--CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+-+||++|||||+|+||++++++|+++|++|+++.|+.+..+...+.... ...++.++.+|+++.+++.++++
T Consensus 2 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (322)
T PLN02986 2 NGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE----- 76 (322)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----
Confidence 35689999999999999999999999999999888877654433322221 12367788999999998877773
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-CC---------
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HV--------- 161 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-~~--------- 161 (272)
.+|+|||+|+...... .+...+.+++|+.++.++++++... .+.++||++||..... +.
T Consensus 77 ---~~d~vih~A~~~~~~~-----~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~ 145 (322)
T PLN02986 77 ---GCDAVFHTASPVFFTV-----KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVV 145 (322)
T ss_pred ---CCCEEEEeCCCcCCCC-----CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCc
Confidence 5899999999632211 1123567899999999999887331 2346999999976421 10
Q ss_pred ------------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-hCHHHHHHHHhcCC-----
Q 024125 162 ------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-ENKEFVDKVIARTP----- 223 (272)
Q Consensus 162 ------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~----- 223 (272)
.....|+.||.+.+.+++.+.+++ ++++++++|+.+.++...... .............+
T Consensus 146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~ 222 (322)
T PLN02986 146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNR 222 (322)
T ss_pred CcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCc
Confidence 013569999999999999887764 799999999999887643210 01222222222211
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 224 LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 224 ~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
...+..++|+|++++.++.... ..| .++++|.
T Consensus 223 ~~~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~ 254 (322)
T PLN02986 223 FYRFVDVRDVALAHIKALETPS--ANG-RYIIDGP 254 (322)
T ss_pred CcceeEHHHHHHHHHHHhcCcc--cCC-cEEEecC
Confidence 2346789999999998885332 234 6777543
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=171.28 Aligned_cols=236 Identities=14% Similarity=0.100 Sum_probs=160.9
Q ss_pred ccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH---H----H---------HHHHHHHH-hCCCeE
Q 024125 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV---E----L---------NKCLKEWQ-SKGFVV 68 (272)
Q Consensus 6 ~~~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~---~----~---------~~~~~~~~-~~~~~~ 68 (272)
.+.|.++..+++|+||||||+|+||++++++|+++|++|++++|... . . .+.++.+. ..+.++
T Consensus 36 ~~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 115 (442)
T PLN02572 36 PSAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEI 115 (442)
T ss_pred CCCCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcc
Confidence 35677778899999999999999999999999999999999874211 0 0 01111111 112357
Q ss_pred EEEEecCCCHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-C
Q 024125 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-G 147 (272)
Q Consensus 69 ~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g 147 (272)
.++.+|++|.+++.++++.. ++|+|||+|+... .+....+.++++..+++|+.|++++++++.. .+. .
T Consensus 116 ~~v~~Dl~d~~~v~~~l~~~------~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~----~gv~~ 184 (442)
T PLN02572 116 ELYVGDICDFEFLSEAFKSF------EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKE----FAPDC 184 (442)
T ss_pred eEEECCCCCHHHHHHHHHhC------CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHH----hCCCc
Confidence 88899999999998888652 6999999997532 2333445566788899999999999998743 333 4
Q ss_pred eEEEecCCCCCC------------------------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccCh
Q 024125 148 SIVFISSVGGLS------------------------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (272)
Q Consensus 148 ~ii~vsS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~ 203 (272)
++|++||...+. +..+...|+.||.+.+.+++.++..+ |+.+..+.|+.+..+
T Consensus 185 ~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---gl~~v~lR~~~vyGp 261 (442)
T PLN02572 185 HLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGV 261 (442)
T ss_pred cEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---CCCEEEEecccccCC
Confidence 899999875432 11233579999999999998887764 799999999888666
Q ss_pred hhHhh-----------------hhCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhcCCCCCccc--cEEEe
Q 024125 204 LVERL-----------------LENKEFVDKVIARTP---------LQRVGEPEEVASLVAYLCLPAASYITG--QIISV 255 (272)
Q Consensus 204 ~~~~~-----------------~~~~~~~~~~~~~~~---------~~~~~~~~e~a~~~~~l~~~~~~~~~G--~~i~~ 255 (272)
..... ..-+.+..+.....+ ...+..++|++++++.++... ...| .++++
T Consensus 262 ~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~--~~~g~~~i~Ni 339 (442)
T PLN02572 262 RTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANP--AKPGEFRVFNQ 339 (442)
T ss_pred CCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhCh--hhcCceeEEEe
Confidence 42110 000112222222222 125578999999998887532 1234 46776
Q ss_pred CC
Q 024125 256 DG 257 (272)
Q Consensus 256 dg 257 (272)
.+
T Consensus 340 gs 341 (442)
T PLN02572 340 FT 341 (442)
T ss_pred CC
Confidence 43
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-20 Score=163.90 Aligned_cols=224 Identities=16% Similarity=0.121 Sum_probs=154.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEE-EEeeCChHH--HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVV-HTCSRNEVE--LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v-~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
|++|||||+|+||+++++.|+++|+++ ++++|.... ..... .+ ....++.++.+|++|.+++++++++ .
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------~ 73 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PV-AQSERFAFEKVDICDRAELARVFTE------H 73 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hc-ccCCceEEEECCCcChHHHHHHHhh------c
Confidence 689999999999999999999999864 455554321 11111 11 1123577789999999998888764 2
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-----CCCCeEEEecCCCCCC----------
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-----SGVGSIVFISSVGGLS---------- 159 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~~~g~ii~vsS~~~~~---------- 159 (272)
++|+|||+||.... ..+.++++..+++|+.++.++++++.+.|.. .+..++|++||...+.
T Consensus 74 ~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 149 (355)
T PRK10217 74 QPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT 149 (355)
T ss_pred CCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence 59999999996432 2244567899999999999999999876421 2235899999854321
Q ss_pred ---CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH--hhhhCHHHHHHHHhcCC---------CC
Q 024125 160 ---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE--RLLENKEFVDKVIARTP---------LQ 225 (272)
Q Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~---------~~ 225 (272)
+..+...|+.||.+.+.+++.+++++ ++++..+.|+.+..+-.. .+. +..........+ ..
T Consensus 150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~--~~~~~~~~~~~~~~~~g~g~~~~ 224 (355)
T PRK10217 150 ETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLI--PLMILNALAGKPLPVYGNGQQIR 224 (355)
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHH--HHHHHHHhcCCCceEeCCCCeee
Confidence 22346789999999999999998876 567777777766554321 010 111122221111 23
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 226 RVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 226 ~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
.+..++|+++++..++... ..|+.+++.+|..+
T Consensus 225 ~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~ 257 (355)
T PRK10217 225 DWLYVEDHARALYCVATTG---KVGETYNIGGHNER 257 (355)
T ss_pred CcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence 4678999999998887532 24788999888654
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.8e-20 Score=158.69 Aligned_cols=217 Identities=11% Similarity=0.022 Sum_probs=149.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH--HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+-++|+||||||+|+||++++++|+++|++|+++.|+.. ...+....+...+.++.++.+|++|.+++.+++
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l------ 76 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL------ 76 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHH------
Confidence 345789999999999999999999999999999988532 222333333222346778899999999886665
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC---C------
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---G------ 162 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~---~------ 162 (272)
..+|.++|.++.... .. .++++++++|+.+++++++++.+.+ +.++||++||..+.... .
T Consensus 77 --~~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~ 145 (297)
T PLN02583 77 --KGCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDV 145 (297)
T ss_pred --cCCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCC
Confidence 358999987753211 11 2457899999999999999986643 34699999997653210 0
Q ss_pred -----C--------ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC--CCCC
Q 024125 163 -----S--------GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTP--LQRV 227 (272)
Q Consensus 163 -----~--------~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~ 227 (272)
. ...|+.||...+.+++.++++. ++++++++|+.+.++...... ..........+ ...+
T Consensus 146 ~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---gi~~v~lrp~~v~Gp~~~~~~---~~~~~~~~~~~~~~~~~ 219 (297)
T PLN02583 146 DERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---GVNMVSINAGLLMGPSLTQHN---PYLKGAAQMYENGVLVT 219 (297)
T ss_pred CcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---CCcEEEEcCCcccCCCCCCch---hhhcCCcccCcccCcce
Confidence 0 0159999999999998887653 899999999999887643210 00100000011 1246
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccEEEe
Q 024125 228 GEPEEVASLVAYLCLPAASYITGQIISV 255 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~~G~~i~~ 255 (272)
.+++|+|++++..+... ...|+++..
T Consensus 220 v~V~Dva~a~~~al~~~--~~~~r~~~~ 245 (297)
T PLN02583 220 VDVNFLVDAHIRAFEDV--SSYGRYLCF 245 (297)
T ss_pred EEHHHHHHHHHHHhcCc--ccCCcEEEe
Confidence 78999999999888532 223554443
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-19 Score=158.46 Aligned_cols=211 Identities=19% Similarity=0.161 Sum_probs=149.3
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
-++++||||||+|+||++++++|+++|++|++++|+.+....+.+.+.. ..++.++.+|+++.+++.+++ .
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~--------~ 78 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAV--------K 78 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHH--------c
Confidence 4678999999999999999999999999999999987766655544432 346888899999999887776 3
Q ss_pred CccEEEECCCCCCCCC-CCCCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC----------
Q 024125 95 KLNILVNNVGTNIRKP-TIEYSAEEY--SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---------- 161 (272)
Q Consensus 95 ~id~li~~ag~~~~~~-~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~---------- 161 (272)
.+|+|||+|+...... ....+.+++ ...++.|+.+++++++++.+.. +.++||++||...+...
T Consensus 79 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~~ 155 (353)
T PLN02896 79 GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAVV 155 (353)
T ss_pred CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCcc
Confidence 5899999999754321 112233332 4567888899999999875431 24699999996544210
Q ss_pred ---------------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHH---hc-C
Q 024125 162 ---------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVI---AR-T 222 (272)
Q Consensus 162 ---------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---~~-~ 222 (272)
++..+|+.||.+.+.+++.+++++ ++++..++|+.+-.+......+ ....... .. .
T Consensus 156 ~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~--~~~~~~~~~~~g~~ 230 (353)
T PLN02896 156 DETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSVP--SSIQVLLSPITGDS 230 (353)
T ss_pred CcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCCC--chHHHHHHHhcCCc
Confidence 112379999999999999887765 7999999998887765321111 1111111 00 0
Q ss_pred C-------------CCCCCCHHHHHHHHHHHhc
Q 024125 223 P-------------LQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 223 ~-------------~~~~~~~~e~a~~~~~l~~ 242 (272)
. ...+..++|++++++.++.
T Consensus 231 ~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~ 263 (353)
T PLN02896 231 KLFSILSAVNSRMGSIALVHIEDICDAHIFLME 263 (353)
T ss_pred cccccccccccccCceeEEeHHHHHHHHHHHHh
Confidence 0 1246789999999988875
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-20 Score=165.69 Aligned_cols=233 Identities=21% Similarity=0.186 Sum_probs=185.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.++||+||||||+|.||+++++++++.+. ++++.+|++.++.....+++.. ..+..++-+|+.|.+.++.+++.
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~--- 323 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG--- 323 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc---
Confidence 47899999999999999999999999986 7999999999999998888864 45778888999999999888864
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
-++|+++|+|+.-+... .+ ....+-+.+|++|+.+++.++ .+.+..++|++|+--+.+ +.+.|++|
T Consensus 324 ---~kvd~VfHAAA~KHVPl-~E---~nP~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKAV~---PtNvmGaT 389 (588)
T COG1086 324 ---HKVDIVFHAAALKHVPL-VE---YNPEEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKAVN---PTNVMGAT 389 (588)
T ss_pred ---CCCceEEEhhhhccCcc-hh---cCHHHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcccC---CchHhhHH
Confidence 26999999999744333 22 234567889999999999998 556778999999866554 45789999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC--------CCCCCHHHHHHHHHHHhc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL--------QRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~e~a~~~~~l~~ 242 (272)
|...+.++++++.+....+-++.++.-|.|....-+-. |-+.+++.+..|. +.+.+.+|.++.++....
T Consensus 390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSVi---PlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a 466 (588)
T COG1086 390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVI---PLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGA 466 (588)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCH---HHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHh
Confidence 99999999999998776678999999998877553322 3344444444433 445688999999988775
Q ss_pred CCCCCccccEEEeCCCcCCCCCCCCCC
Q 024125 243 PAASYITGQIISVDGGFTANGFNPGIR 269 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~~~~~~~~~ 269 (272)
. .-.|+++.+|-|-..+..|++.+
T Consensus 467 ~---~~gGeifvldMGepvkI~dLAk~ 490 (588)
T COG1086 467 I---AKGGEIFVLDMGEPVKIIDLAKA 490 (588)
T ss_pred h---cCCCcEEEEcCCCCeEHHHHHHH
Confidence 4 34599999999988877666544
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-19 Score=159.50 Aligned_cols=208 Identities=14% Similarity=0.113 Sum_probs=147.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+.|++|||||+|+||++++++|+++|++|++++|+.+............ ..++.++..|+++.+.++++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence 5689999999999999999999999999999998866555443322211 1357788999999988877763
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC------------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV------------ 161 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~------------ 161 (272)
.+|+|||+|+..... . .+..+..+++|+.++.++++++.+.. ..++||++||.......
T Consensus 77 -~~d~ViH~A~~~~~~---~--~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~ 147 (351)
T PLN02650 77 -GCTGVFHVATPMDFE---S--KDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCW 147 (351)
T ss_pred -CCCEEEEeCCCCCCC---C--CCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccC
Confidence 589999999853211 1 12235788999999999999885531 13689999997432110
Q ss_pred ----------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHH---Hh------cC
Q 024125 162 ----------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKV---IA------RT 222 (272)
Q Consensus 162 ----------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~------~~ 222 (272)
.+...|+.||.+.+.+++.+++++ +++++.++|+.+.++........ ...... .. ..
T Consensus 148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~Gp~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 223 (351)
T PLN02650 148 SDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---GLDFISIIPTLVVGPFISTSMPP-SLITALSLITGNEAHYSII 223 (351)
T ss_pred CchhhhhccccccchHHHHHHHHHHHHHHHHHHc---CCeEEEECCCceECCCCCCCCCc-cHHHHHHHhcCCccccCcC
Confidence 012379999999999999988764 89999999999988764321111 111111 00 01
Q ss_pred CCCCCCCHHHHHHHHHHHhcC
Q 024125 223 PLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 223 ~~~~~~~~~e~a~~~~~l~~~ 243 (272)
....+..++|++++++.++..
T Consensus 224 ~~r~~v~V~Dva~a~~~~l~~ 244 (351)
T PLN02650 224 KQGQFVHLDDLCNAHIFLFEH 244 (351)
T ss_pred CCcceeeHHHHHHHHHHHhcC
Confidence 224678999999999988853
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-19 Score=157.82 Aligned_cols=205 Identities=15% Similarity=0.096 Sum_probs=145.8
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH-HHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK-CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ....+.....++.++.+|+++.+++.++++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 80 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID------- 80 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence 568999999999999999999999999999999997654322 122232222357788999999998877773
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC------------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV------------ 161 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~------------ 161 (272)
.+|+|||+|+... +++++.+++|+.++.++++++. +.+.++||++||..+..+.
T Consensus 81 -~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~----~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~ 146 (342)
T PLN02214 81 -GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAA----EAKVKRVVITSSIGAVYMDPNRDPEAVVDES 146 (342)
T ss_pred -cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeccceeeeccCCCCCCcccCcc
Confidence 5899999998531 2346789999999999999874 3455699999996432210
Q ss_pred ---------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC--HHHHHHHHhcC-----CCC
Q 024125 162 ---------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN--KEFVDKVIART-----PLQ 225 (272)
Q Consensus 162 ---------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~-----~~~ 225 (272)
.+...|+.||.+.+.+++.+++++ ++++..++|+.+..+........ ........... ...
T Consensus 147 ~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 223 (342)
T PLN02214 147 CWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQ 223 (342)
T ss_pred cCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCc
Confidence 023479999999999999887764 79999999998877643211000 01111111111 112
Q ss_pred CCCCHHHHHHHHHHHhcC
Q 024125 226 RVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 226 ~~~~~~e~a~~~~~l~~~ 243 (272)
.+..++|++++++.++..
T Consensus 224 ~~i~V~Dva~a~~~al~~ 241 (342)
T PLN02214 224 AYVDVRDVALAHVLVYEA 241 (342)
T ss_pred CeeEHHHHHHHHHHHHhC
Confidence 456899999999988853
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-19 Score=154.57 Aligned_cols=223 Identities=16% Similarity=0.115 Sum_probs=166.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH--HHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK--CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|+||||+|+||++|+++|+++|+.|..+.|+++..+. .+.+++....+...+..|++|.++++++++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID------- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence 68999999999999999999999999999999999887554 455666556678899999999999998884
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCC-CC--------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHV-GS-------- 163 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~-~~-------- 163 (272)
.+|.|+|.|........ + .-.+.++..+.|+.++++++. +.+ ..|||++||.++.... +.
T Consensus 78 -gcdgVfH~Asp~~~~~~---~--~e~~li~pav~Gt~nVL~ac~----~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvd 147 (327)
T KOG1502|consen 78 -GCDGVFHTASPVDFDLE---D--PEKELIDPAVKGTKNVLEACK----KTKSVKRVVYTSSTAAVRYNGPNIGENSVVD 147 (327)
T ss_pred -CCCEEEEeCccCCCCCC---C--cHHhhhhHHHHHHHHHHHHHh----ccCCcceEEEeccHHHhccCCcCCCCCcccc
Confidence 69999999986433221 1 123789999999999999983 333 5799999998876533 11
Q ss_pred -------------ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-HHHHHHHHhc----CC--
Q 024125 164 -------------GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-KEFVDKVIAR----TP-- 223 (272)
Q Consensus 164 -------------~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~----~~-- 223 (272)
...|+.||...+.-+..+++|- ++...+++|++|-.|........ ....-.+... .+
T Consensus 148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~ 224 (327)
T KOG1502|consen 148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNF 224 (327)
T ss_pred cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---CccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCC
Confidence 1358999988888888877773 79999999999988886552211 1111112111 11
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcC
Q 024125 224 LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFT 260 (272)
Q Consensus 224 ~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~ 260 (272)
...+.+++|+|.+.++++.... -.|++|.+....+
T Consensus 225 ~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~~~~ 259 (327)
T KOG1502|consen 225 WLAFVDVRDVALAHVLALEKPS--AKGRYICVGEVVS 259 (327)
T ss_pred ceeeEeHHHHHHHHHHHHcCcc--cCceEEEecCccc
Confidence 1235789999999999995433 3499998877655
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.4e-19 Score=156.64 Aligned_cols=209 Identities=16% Similarity=0.098 Sum_probs=145.5
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH--HHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK--EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++|||||+|+||++++++|+++|++|+++.|+.+....... .+.. ..++.++.+|++|.+++.+++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~------- 78 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPI------- 78 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHH-------
Confidence 568999999999999999999999999999888887644332221 1111 125778899999998887766
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC------------
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------ 160 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~------------ 160 (272)
.++|+|||+|+... .. ..+.....+++|+.++.++++++.+. .+.++||++||...+..
T Consensus 79 -~~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E 149 (338)
T PLN00198 79 -AGCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNE 149 (338)
T ss_pred -hcCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceecc
Confidence 35899999998521 11 11234567899999999999987542 23479999999764321
Q ss_pred ------------CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-HHHHHHHHhc------
Q 024125 161 ------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-KEFVDKVIAR------ 221 (272)
Q Consensus 161 ------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~------ 221 (272)
.++...|+.||.+.+.+++.+++++ ++++..+.|+.+..+......+. -.........
T Consensus 150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
T PLN00198 150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLIN 226 (338)
T ss_pred ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccc
Confidence 1234579999999999999887764 78999999998877653211110 0001111111
Q ss_pred ----CC----CCCCCCHHHHHHHHHHHhcC
Q 024125 222 ----TP----LQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 222 ----~~----~~~~~~~~e~a~~~~~l~~~ 243 (272)
.+ ...+..++|++++++.++..
T Consensus 227 g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~ 256 (338)
T PLN00198 227 GLKGMQMLSGSISITHVEDVCRAHIFLAEK 256 (338)
T ss_pred cccccccccCCcceeEHHHHHHHHHHHhhC
Confidence 01 13568899999999888754
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.8e-20 Score=144.48 Aligned_cols=144 Identities=19% Similarity=0.178 Sum_probs=119.3
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|+++.++++++++++.+.
T Consensus 11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~ 90 (169)
T PRK06720 11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA 90 (169)
T ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46689999999999999999999999999999999999988887777777655667778899999999999999999988
Q ss_pred cCCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-------CCeEEEecCCCCCC
Q 024125 92 FNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-------VGSIVFISSVGGLS 159 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~g~ii~vsS~~~~~ 159 (272)
+ +++|++|||||.... .++++.+.++ ++ .+|+.+.+..++.+.+.|.+++ .|++-.|||.+...
T Consensus 91 ~-G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
T PRK06720 91 F-SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF 162 (169)
T ss_pred c-CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence 8 689999999998654 4444445444 44 7778888889999999987653 47888888876543
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.6e-20 Score=161.08 Aligned_cols=227 Identities=17% Similarity=0.059 Sum_probs=147.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHH-hCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
|++|||||+|+||++++++|+++|++|++++|+.+. .+.+.++.. .....+.++.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 689999999999999999999999999999987532 222211111 01235788899999999988888653
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------C
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------H 160 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~ 160 (272)
++|+|||+|+...... +.+.....+++|+.++.++++++.+.-. .+..++|++||...+. +
T Consensus 78 ---~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~E~~~ 149 (343)
T TIGR01472 78 ---KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGL-IKSVKFYQASTSELYGKVQEIPQNETTP 149 (343)
T ss_pred ---CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCC-CcCeeEEEeccHHhhCCCCCCCCCCCCC
Confidence 5899999999743321 2223356778999999999998865310 1113799999954322 2
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccC---CeeEEEeeCCcccChhhHhhhhCHHHHHHHHh----------cCCCCCC
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKD---NIRTNSVAPWYTKTSLVERLLENKEFVDKVIA----------RTPLQRV 227 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~---~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~----------~~~~~~~ 227 (272)
..+...|+.||.+.+.+++.+++++.-. ++.++.+.|+.-..-....+ .....+... ......+
T Consensus 150 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~g~~~rd~ 226 (343)
T TIGR01472 150 FYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKI---TRAAAKIKLGLQEKLYLGNLDAKRDW 226 (343)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHH---HHHHHHHHcCCCCceeeCCCccccCc
Confidence 2345789999999999999998876322 12234445553211011100 011111111 1223456
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..++|++++++.++... .+..+++.+|...+
T Consensus 227 i~V~D~a~a~~~~~~~~----~~~~yni~~g~~~s 257 (343)
T TIGR01472 227 GHAKDYVEAMWLMLQQD----KPDDYVIATGETHS 257 (343)
T ss_pred eeHHHHHHHHHHHHhcC----CCccEEecCCCcee
Confidence 78999999998877532 13468888775543
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.5e-19 Score=156.50 Aligned_cols=230 Identities=13% Similarity=0.049 Sum_probs=156.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH----h-CCCeEEEEEecCCCHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ----S-KGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
..+++|+||||||+|.||++++++|+++|++|++++|............. . ...++.++.+|++|.+++..+++
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~- 89 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK- 89 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence 45778999999999999999999999999999999886543222222111 1 11357788999999888776663
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-------
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------- 160 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~------- 160 (272)
.+|+|||+|+...... +.++....+++|+.|+.++++++ ++.+..++|++||...+..
T Consensus 90 -------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 154 (348)
T PRK15181 90 -------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASSSTYGDHPDLPKI 154 (348)
T ss_pred -------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeechHhhCCCCCCCCC
Confidence 5899999999643211 22334567999999999999877 4455569999998643321
Q ss_pred ----CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhh--hh--CHHHHHHHHhcCC---------
Q 024125 161 ----VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERL--LE--NKEFVDKVIARTP--------- 223 (272)
Q Consensus 161 ----~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~--~~--~~~~~~~~~~~~~--------- 223 (272)
..+...|+.+|.+.+.+++.++.+. ++++..+.|+.+-.+-.... .. -+.+..+.....+
T Consensus 155 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~ 231 (348)
T PRK15181 155 EERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGST 231 (348)
T ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCc
Confidence 1234679999999999998887664 78999999987766532100 00 0122222222221
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 224 LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 224 ~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
...+..++|++++++.++........|+.+++.+|...
T Consensus 232 ~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~ 269 (348)
T PRK15181 232 SRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRT 269 (348)
T ss_pred eEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcE
Confidence 12345699999998876642222235889999887553
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.5e-19 Score=154.62 Aligned_cols=209 Identities=14% Similarity=0.093 Sum_probs=145.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH--hCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ--SKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++|++|||||+|+||++++++|+++|++|++++|+.+.......... ....++.++.+|+++.+++.+++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------- 74 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVV-------- 74 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHH--------
Confidence 47899999999999999999999999999999887654332222111 11236788899999998877776
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC--CCCCC---------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG--LSHVG--------- 162 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~--~~~~~--------- 162 (272)
..+|+|||+|+..... .. +..+..+++|+.++.++++++... .+..++|++||..+ +.+.+
T Consensus 75 ~~~d~Vih~A~~~~~~----~~-~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E 146 (322)
T PLN02662 75 DGCEGVFHTASPFYHD----VT-DPQAELIDPAVKGTLNVLRSCAKV---PSVKRVVVTSSMAAVAYNGKPLTPDVVVDE 146 (322)
T ss_pred cCCCEEEEeCCcccCC----CC-ChHHHHHHHHHHHHHHHHHHHHhC---CCCCEEEEccCHHHhcCCCcCCCCCCcCCc
Confidence 3589999999864211 11 112478899999999999987442 14469999999642 21100
Q ss_pred -----C------ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcC-----CCC
Q 024125 163 -----S------GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIART-----PLQ 225 (272)
Q Consensus 163 -----~------~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~-----~~~ 225 (272)
+ ...|+.+|.+.+.+++.+.++. +++++.++|+.+.++....... ......+..... ...
T Consensus 147 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (322)
T PLN02662 147 TWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASY 223 (322)
T ss_pred ccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCc
Confidence 1 1479999999999998877654 7999999999998876422110 111222221111 123
Q ss_pred CCCCHHHHHHHHHHHhcC
Q 024125 226 RVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 226 ~~~~~~e~a~~~~~l~~~ 243 (272)
.+..++|++++++.++..
T Consensus 224 ~~i~v~Dva~a~~~~~~~ 241 (322)
T PLN02662 224 RWVDVRDVANAHIQAFEI 241 (322)
T ss_pred CeEEHHHHHHHHHHHhcC
Confidence 467899999999988853
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.3e-19 Score=155.24 Aligned_cols=231 Identities=18% Similarity=0.176 Sum_probs=152.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH----hCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ----SKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
|++++|++|||||+|+||++++++|+++|++|++++|.........+.+. ....++.++.+|+++.++++++++.
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~- 79 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS- 79 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh-
Confidence 45788999999999999999999999999999999875432221111111 1123577789999999998888764
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC---------
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--------- 159 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~--------- 159 (272)
..+|+|||+|+...... +.+++.+.+++|+.++.++++++ ++.+..++|++||...+.
T Consensus 80 -----~~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E 146 (352)
T PLN02240 80 -----TRFDAVIHFAGLKAVGE----SVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTE 146 (352)
T ss_pred -----CCCCEEEEccccCCccc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCC
Confidence 26999999999643221 33456789999999999988765 445557899999964321
Q ss_pred --CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccCh------------hhHhhhhCHHHHHHHHhc-C--
Q 024125 160 --HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS------------LVERLLENKEFVDKVIAR-T-- 222 (272)
Q Consensus 160 --~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~------------~~~~~~~~~~~~~~~~~~-~-- 222 (272)
+..+...|+.+|.+.+.+++.++.+. .++.+..+.|+.+..+ ....+. .+....... .
T Consensus 147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~ 221 (352)
T PLN02240 147 EFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLM---PYVQQVAVGRRPE 221 (352)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHH---HHHHHHHhCCCCc
Confidence 12245789999999999999887652 3566666665432211 000010 111111111 0
Q ss_pred --------------CCCCCCCHHHHHHHHHHHhcCC--CCCccccEEEeCCCcCCC
Q 024125 223 --------------PLQRVGEPEEVASLVAYLCLPA--ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 223 --------------~~~~~~~~~e~a~~~~~l~~~~--~~~~~G~~i~~dgG~~~~ 262 (272)
....+..++|++++++.++... .....|+.+++.+|..++
T Consensus 222 ~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s 277 (352)
T PLN02240 222 LTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTS 277 (352)
T ss_pred eEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEe
Confidence 0113466999999887766421 122457899998886554
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.7e-19 Score=153.26 Aligned_cols=223 Identities=18% Similarity=0.129 Sum_probs=152.5
Q ss_pred EEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChH-HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++|||||+|+||++++++|+++| .+|++++|... ...+..+.+.. ..++.++.+|+++++++.++++.. +
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~------~ 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH------Q 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc------C
Confidence 48999999999999999999987 68888876421 11111122211 235677889999999988887542 5
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC------------CCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------VGS 163 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~------------~~~ 163 (272)
+|+|||+|+..... .+.+..+..+++|+.++.++++++.+.+ ...++|++||...+.. ..+
T Consensus 74 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~ 146 (317)
T TIGR01181 74 PDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYW---HEFRFHHISTDEVYGDLEKGDAFTETTPLAP 146 (317)
T ss_pred CCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence 99999999864322 2334567889999999999998875432 1248999998543221 223
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH--hhhhCHHHHHHHHhcCCC---------CCCCCHHH
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE--RLLENKEFVDKVIARTPL---------QRVGEPEE 232 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~---------~~~~~~~e 232 (272)
...|+.+|.+.+.+++.++.+. ++++..+.|+.+..+... .+. +..........+. ..+..++|
T Consensus 147 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D 221 (317)
T TIGR01181 147 SSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKLI--PLMITNALAGKPLPVYGDGQQVRDWLYVED 221 (317)
T ss_pred CCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccHH--HHHHHHHhcCCCceEeCCCceEEeeEEHHH
Confidence 4579999999999999988775 788999999877665421 111 1222222222221 13456899
Q ss_pred HHHHHHHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 233 VASLVAYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 233 ~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
+++++..++... ..|+++++.++..+..
T Consensus 222 ~a~~~~~~~~~~---~~~~~~~~~~~~~~s~ 249 (317)
T TIGR01181 222 HCRAIYLVLEKG---RVGETYNIGGGNERTN 249 (317)
T ss_pred HHHHHHHHHcCC---CCCceEEeCCCCceeH
Confidence 999998888532 3578899988765543
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.2e-20 Score=154.48 Aligned_cols=225 Identities=21% Similarity=0.212 Sum_probs=158.7
Q ss_pred EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC----CCe--EEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GFV--VSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~----~~~--~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
||||||+|.||+++++++++.+. .+++++|++..+-++..++... +.+ +..+.+|++|.+.+.+++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~----- 75 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE----- 75 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence 79999999999999999999985 8999999999999999888532 222 23457899999998888864
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
.++|+|+|.|+.-+....++ ...+.+++|+.|+.++++++. +.+..++|++|+--+.+ +.+.|++||.
T Consensus 76 -~~pdiVfHaAA~KhVpl~E~----~p~eav~tNv~GT~nv~~aa~----~~~v~~~v~ISTDKAv~---PtnvmGatKr 143 (293)
T PF02719_consen 76 -YKPDIVFHAAALKHVPLMED----NPFEAVKTNVLGTQNVAEAAI----EHGVERFVFISTDKAVN---PTNVMGATKR 143 (293)
T ss_dssp --T-SEEEE------HHHHCC----CHHHHHHHHCHHHHHHHHHHH----HTT-SEEEEEEECGCSS-----SHHHHHHH
T ss_pred -cCCCEEEEChhcCCCChHHh----CHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEccccccCC---CCcHHHHHHH
Confidence 37999999999743332222 346789999999999999884 45678999999876554 4588999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC--------CCCCCHHHHHHHHHHHhcCC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL--------QRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~e~a~~~~~l~~~~ 244 (272)
..+.++.+++......+.++.+|..|.|....-+-+ +-+..++....|. +.+.+++|.++.++..+.-.
T Consensus 144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVi---p~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~ 220 (293)
T PF02719_consen 144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVI---PLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA 220 (293)
T ss_dssp HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCH---HHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHH---HHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC
Confidence 999999999988877789999999998866443222 3455666655443 45578999999998777432
Q ss_pred CCCccccEEEeCCCcCCCCCCCC
Q 024125 245 ASYITGQIISVDGGFTANGFNPG 267 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~~~~~~ 267 (272)
..|+.+.+|-|..++..|++
T Consensus 221 ---~~geifvl~mg~~v~I~dlA 240 (293)
T PF02719_consen 221 ---KGGEIFVLDMGEPVKILDLA 240 (293)
T ss_dssp ----TTEEEEE---TCEECCCHH
T ss_pred ---CCCcEEEecCCCCcCHHHHH
Confidence 35999999999888877654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-18 Score=151.25 Aligned_cols=226 Identities=16% Similarity=0.147 Sum_probs=148.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+++|||||+|+||++++++|+++|++|++++|..+........+.+ .+.++.++.+|++|.+++.++++. .++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~ 74 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD------HAI 74 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc------CCC
Confidence 3699999999999999999999999999887653332222222222 123566788999999988887753 369
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------C-CCC
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------V-GSG 164 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~-~~~ 164 (272)
|+|||+|+...... ..+.....+++|+.++.++++++ ++.+.+++|++||...+.. . .+.
T Consensus 75 d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~ 146 (338)
T PRK10675 75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ 146 (338)
T ss_pred CEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence 99999998743222 22334567899999999888765 5556678999999653321 1 235
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChh------------hHhhhhCHHHHHHHHhc-C---------
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL------------VERLLENKEFVDKVIAR-T--------- 222 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~------------~~~~~~~~~~~~~~~~~-~--------- 222 (272)
..|+.+|.+.+.+++.++++.. ++++..+.|+.+..+. ...+. ....+.... .
T Consensus 147 ~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 221 (338)
T PRK10675 147 SPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLM---PYIAQVAVGRRDSLAIFGND 221 (338)
T ss_pred ChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCCCcccccccCCCCChhHHH---HHHHHHHhcCCCceEEeCCc
Confidence 7899999999999999876642 4566666654332221 00110 111112111 0
Q ss_pred -------CCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 223 -------PLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 223 -------~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
....+..++|++++++.++........|+.+++.+|..++
T Consensus 222 ~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s 268 (338)
T PRK10675 222 YPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSS 268 (338)
T ss_pred CCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCcee
Confidence 0124578999999998777532122346899998886654
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-18 Score=152.90 Aligned_cols=223 Identities=16% Similarity=0.119 Sum_probs=149.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChH--HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++|||||+|+||++++++|+++|.+ |+.+++... ..+... .+. ...++.++.+|++|.+++++++++ .+
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~ 73 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQ------HQ 73 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHh------cC
Confidence 6999999999999999999999975 555555321 111111 111 123567789999999999888864 26
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----CCCeEEEecCCCCCC-----------
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-----GVGSIVFISSVGGLS----------- 159 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~ii~vsS~~~~~----------- 159 (272)
+|+|||+|+...... +.+..+..+++|+.++.++++++.++|+.. +..++|++||...+.
T Consensus 74 ~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 149 (352)
T PRK10084 74 PDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS 149 (352)
T ss_pred CCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence 999999998643211 223346789999999999999998876432 235899999964322
Q ss_pred ----------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH--hhhhCHHHHHHHHhcCC----
Q 024125 160 ----------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE--RLLENKEFVDKVIARTP---- 223 (272)
Q Consensus 160 ----------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~---- 223 (272)
+..+...|+.||.+.+.+++.+++++ ++.+..+.|+.+..+... .+. +..........+
T Consensus 150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~--~~~~~~~~~~~~~~~~ 224 (352)
T PRK10084 150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLI--PLVILNALEGKPLPIY 224 (352)
T ss_pred ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchH--HHHHHHHhcCCCeEEe
Confidence 11334689999999999999998876 556666677655544311 110 111122221111
Q ss_pred -----CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 224 -----LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 224 -----~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
...+..++|+++++..++... ..|+.+++.++...
T Consensus 225 ~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~ 264 (352)
T PRK10084 225 GKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEK 264 (352)
T ss_pred CCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence 123567999999998877532 24788998877544
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.8e-18 Score=150.87 Aligned_cols=209 Identities=12% Similarity=0.059 Sum_probs=143.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC------CCeEEEEEecCCCHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
.+.++|+||||||+|+||++++++|+++|++|+++.|+.+..+.+. ++... ...+.++.+|++|.+++.++++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 4567899999999999999999999999999998888876655442 22111 1247778999999999888774
Q ss_pred HHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCC--C-----
Q 024125 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGG--L----- 158 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~--~----- 158 (272)
.+|.++|+|+......... ......++|+.++.++++++ ++. +..++|++||..+ +
T Consensus 128 --------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~----~~~~~v~r~V~~SS~~~~vyg~~~~ 191 (367)
T PLN02686 128 --------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEAC----VRTESVRKCVFTSSLLACVWRQNYP 191 (367)
T ss_pred --------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHH----HhcCCccEEEEeccHHHhcccccCC
Confidence 4789999998643322111 11245677899999888876 332 4569999999531 1
Q ss_pred CC----------------CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcC
Q 024125 159 SH----------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIART 222 (272)
Q Consensus 159 ~~----------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~ 222 (272)
.. ..+...|+.||.+.+.+++.++++ +|+++++++|+.+.++....... ...........
T Consensus 192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~-~~~~~~~~g~~ 267 (367)
T PLN02686 192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNS-TATIAYLKGAQ 267 (367)
T ss_pred CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCC-hhHHHHhcCCC
Confidence 00 012346999999999999988776 48999999999998885321100 01111111111
Q ss_pred ---C--CCCCCCHHHHHHHHHHHhc
Q 024125 223 ---P--LQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 223 ---~--~~~~~~~~e~a~~~~~l~~ 242 (272)
. ...+..++|++++++.++.
T Consensus 268 ~~~g~g~~~~v~V~Dva~A~~~al~ 292 (367)
T PLN02686 268 EMLADGLLATADVERLAEAHVCVYE 292 (367)
T ss_pred ccCCCCCcCeEEHHHHHHHHHHHHh
Confidence 1 1136789999999988875
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-17 Score=138.72 Aligned_cols=219 Identities=18% Similarity=0.158 Sum_probs=155.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCCh--HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++|||||+|+||++.++++.++.. +|+.+++-. ...+.+. .+. ...++.+++.|+.|.+.+.+++++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~-~~~-~~~~~~fv~~DI~D~~~v~~~~~~------ 72 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA-DVE-DSPRYRFVQGDICDRELVDRLFKE------ 72 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH-hhh-cCCCceEEeccccCHHHHHHHHHh------
Confidence 5789999999999999999998854 467776522 1122222 222 234788999999999998888865
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC-------------CCCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG-------------GLSH 160 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~-------------~~~~ 160 (272)
-++|+|+|-|+-.+.. .+.++.+.-+++|+.|+++++.++..+..+ -+++.||.-. ...+
T Consensus 73 ~~~D~VvhfAAESHVD----RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp 145 (340)
T COG1088 73 YQPDAVVHFAAESHVD----RSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTP 145 (340)
T ss_pred cCCCeEEEechhcccc----ccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCC
Confidence 2799999999865433 366667788999999999999998655432 3788888732 1235
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhh--HhhhhCHHHHHHHHhcCCC---------CCCCC
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV--ERLLENKEFVDKVIARTPL---------QRVGE 229 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~--~~~~~~~~~~~~~~~~~~~---------~~~~~ 229 (272)
+.+.++|++|||+-++|++++.+.+ |+.+....|..--.|.+ .+++ |..+.......|. +.+.-
T Consensus 146 ~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlI--P~~I~nal~g~~lpvYGdG~~iRDWl~ 220 (340)
T COG1088 146 YNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLI--PLMIINALLGKPLPVYGDGLQIRDWLY 220 (340)
T ss_pred CCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhh--HHHHHHHHcCCCCceecCCcceeeeEE
Confidence 6777999999999999999999987 67777777765444443 1221 2223333333443 33445
Q ss_pred HHHHHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 230 PEEVASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 230 ~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
++|-++++..++... .+ |++.+|.||-
T Consensus 221 VeDh~~ai~~Vl~kg--~~-GE~YNIgg~~ 247 (340)
T COG1088 221 VEDHCRAIDLVLTKG--KI-GETYNIGGGN 247 (340)
T ss_pred eHhHHHHHHHHHhcC--cC-CceEEeCCCc
Confidence 888899988887542 22 9999999984
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-17 Score=146.34 Aligned_cols=221 Identities=19% Similarity=0.192 Sum_probs=147.2
Q ss_pred EEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHH---HHHHHHHHhCC--------CeEEEEEecCCCHH------
Q 024125 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVEL---NKCLKEWQSKG--------FVVSGSVCDAASPD------ 79 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~---~~~~~~~~~~~--------~~~~~~~~D~~~~~------ 79 (272)
+||||||+|+||++++++|+++| ++|+++.|+.+.. +.+.+.+.... .++.++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 7899999875422 22222222111 46888899998652
Q ss_pred HHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC
Q 024125 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS 159 (272)
Q Consensus 80 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~ 159 (272)
....+. ..+|+|||||+..... ..++..+++|+.++.++++.+ .+.+..+++++||.....
T Consensus 81 ~~~~~~--------~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a----~~~~~~~~v~iSS~~v~~ 141 (367)
T TIGR01746 81 EWERLA--------ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLA----ASGRAKPLHYVSTISVLA 141 (367)
T ss_pred HHHHHH--------hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHH----hhCCCceEEEEccccccC
Confidence 222222 4699999999964211 124567789999999888876 334445699999986543
Q ss_pred CC----------------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHH----H
Q 024125 160 HV----------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKV----I 219 (272)
Q Consensus 160 ~~----------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~----~ 219 (272)
.. .....|+.+|.+.+.+++.++. .|++++.+.||.+.++.........+..... .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~ 217 (367)
T TIGR01746 142 AIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCL 217 (367)
T ss_pred CcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHH
Confidence 21 1134699999999998876544 3899999999998875221111111111111 0
Q ss_pred --hcCCC-----CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 220 --ARTPL-----QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 220 --~~~~~-----~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
...|. ..+..++++++++..++.......+|+++++.++..+.
T Consensus 218 ~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s 267 (367)
T TIGR01746 218 ALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVS 267 (367)
T ss_pred HhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCC
Confidence 11121 22577899999999988654443458999999876554
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-18 Score=153.17 Aligned_cols=224 Identities=13% Similarity=0.118 Sum_probs=149.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHH-hCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++.++||||||+|+||++++++|+++ |++|++++|+.++...+..... ....++.++.+|++|.++++++++
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~----- 85 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK----- 85 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-----
Confidence 455678999999999999999999998 5899999987665443321110 011357888999999988777663
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC----------
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---------- 161 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~---------- 161 (272)
.+|+|||+|+........ .+..+.+..|+.++.++++++. +.+ .++|++||...+...
T Consensus 86 ---~~d~ViHlAa~~~~~~~~----~~~~~~~~~n~~gt~~ll~aa~----~~~-~r~v~~SS~~vYg~~~~~~~~e~~p 153 (386)
T PLN02427 86 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDHP 153 (386)
T ss_pred ---cCCEEEEcccccChhhhh----hChHHHHHHHHHHHHHHHHHHH----hcC-CEEEEEeeeeeeCCCcCCCCCcccc
Confidence 489999999964322111 1223456689999999888763 333 699999996432210
Q ss_pred -----------------------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhh---------h
Q 024125 162 -----------------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERL---------L 209 (272)
Q Consensus 162 -----------------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~---------~ 209 (272)
.+...|+.+|.+.+.+++.++.. .++.+..+.|+.+..+..... .
T Consensus 154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~ 230 (386)
T PLN02427 154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 230 (386)
T ss_pred cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCcccccccccccc
Confidence 01236999999999999877654 479999999988877642100 0
Q ss_pred hC--HHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 210 EN--KEFVDKVIARTP---------LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 210 ~~--~~~~~~~~~~~~---------~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
.. ..+........+ ...+..++|++++++.++... ....|+.+++.+|
T Consensus 231 ~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~ 289 (386)
T PLN02427 231 PRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNP 289 (386)
T ss_pred chHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCC
Confidence 00 011122222222 124678999999999887532 1235788999876
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.2e-18 Score=146.92 Aligned_cols=227 Identities=19% Similarity=0.157 Sum_probs=152.0
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
+||||||+|+||++++++|+++|++|++++|......+....+... ..+..+.+|+++.++++++++. .++|+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~------~~~d~ 73 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE------HKIDA 73 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh------CCCcE
Confidence 4899999999999999999999999988876443322222222211 1566788999999998888763 47999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCChhh
Q 024125 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSIY 167 (272)
Q Consensus 99 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~~~Y 167 (272)
||||||...... ..++..+.++.|+.++..+++++ .+.+..++|++||...+.. ..+...|
T Consensus 74 vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y 145 (328)
T TIGR01179 74 VIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY 145 (328)
T ss_pred EEECccccCcch----hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence 999999743222 22345577889999999988875 4445579999998654321 1234679
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-----hCHHHHH---HHHh--cC---------CC----
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-----ENKEFVD---KVIA--RT---------PL---- 224 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~---~~~~--~~---------~~---- 224 (272)
+.+|++.+.+++.++.+. .++++..+.|+.+..+...... ....... .... .. +.
T Consensus 146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (328)
T TIGR01179 146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT 223 (328)
T ss_pred HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence 999999999999987652 4788999999766554211100 0011111 1111 00 11
Q ss_pred --CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 225 --QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 225 --~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..+..++|+++++..++........|+.+++.++..+.
T Consensus 224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s 263 (328)
T TIGR01179 224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFS 263 (328)
T ss_pred eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCccc
Confidence 13466899999999887532222457889988776554
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=145.27 Aligned_cols=210 Identities=21% Similarity=0.180 Sum_probs=145.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+++|||||+|+||+++++.|+++|++|++++|+.+..... . ...+..+.+|+++.+++++++ ..+|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~--------~~~d 66 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAV--------AGCR 66 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHH--------hCCC
Confidence 4799999999999999999999999999999986543221 1 124667899999998887766 3589
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC---------------
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG--------------- 162 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~--------------- 162 (272)
+|||+|+.... ..++.+..+++|+.++.++++++. +.+.+++|++||...+...+
T Consensus 67 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~ 136 (328)
T TIGR03466 67 ALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVRGDGTPADETTPSSLDD 136 (328)
T ss_pred EEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence 99999985321 112356788999999999888774 34557999999976543210
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHH-HhcCC-----CCCCCCHHHHHHH
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKV-IARTP-----LQRVGEPEEVASL 236 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~e~a~~ 236 (272)
....|+.+|.+.+.+++.++.+ .++++..++|+.+..+............... ....+ ...+..++|++++
T Consensus 137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 213 (328)
T TIGR03466 137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEG 213 (328)
T ss_pred ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHH
Confidence 1347999999999999988765 3789999999877554321110001111111 11111 1234579999999
Q ss_pred HHHHhcCCCCCccccEEEeCC
Q 024125 237 VAYLCLPAASYITGQIISVDG 257 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~dg 257 (272)
+..++... ..|+.+++.+
T Consensus 214 ~~~~~~~~---~~~~~~~~~~ 231 (328)
T TIGR03466 214 HLLALERG---RIGERYILGG 231 (328)
T ss_pred HHHHHhCC---CCCceEEecC
Confidence 88777532 3578787753
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=142.55 Aligned_cols=220 Identities=20% Similarity=0.178 Sum_probs=153.0
Q ss_pred EEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 21 LVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 21 lItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
|||||+|+||++++++|+++| ++|.+.++...... ...+... ....++.+|++|.+++.+++ ...|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~~~~~~~~Di~d~~~l~~a~--------~g~d~ 69 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-GVKEYIQGDITDPESLEEAL--------EGVDV 69 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-cceeEEEeccccHHHHHHHh--------cCCce
Confidence 699999999999999999999 68888887654322 1111111 22337899999999998888 46899
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------------C
Q 024125 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------------V 161 (272)
Q Consensus 99 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------------~ 161 (272)
|||+|+...... ....+..+++|+.|+-++++++ ++.+..++|++||...... .
T Consensus 70 V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa----~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~ 140 (280)
T PF01073_consen 70 VFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAA----RKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS 140 (280)
T ss_pred EEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence 999999643322 2345789999999999999988 4456789999999875433 1
Q ss_pred CCChhhHHHHHHHHHHHHHHHH-HHc-cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhc---------CCCCCCCCH
Q 024125 162 GSGSIYGATKAAMNQLTRNLAC-EWA-KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR---------TPLQRVGEP 230 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~-el~-~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 230 (272)
.....|+.||+..|.++..... ++. ...++..+|+|..|..+.-..+.+. ........ .-...+..+
T Consensus 141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~--~~~~~~~g~~~~~~g~~~~~~~~vyV 218 (280)
T PF01073_consen 141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPR--LVKMVRSGLFLFQIGDGNNLFDFVYV 218 (280)
T ss_pred cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccch--hhHHHHhcccceeecCCCceECcEeH
Confidence 1335799999999999877655 222 1258999999988877654332211 11111111 111234569
Q ss_pred HHHHHHHHHHhc---CC--CCCccccEEEeCCCcCCC
Q 024125 231 EEVASLVAYLCL---PA--ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 231 ~e~a~~~~~l~~---~~--~~~~~G~~i~~dgG~~~~ 262 (272)
+++|.+.+..+. .. .....||.+.+..|-...
T Consensus 219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~ 255 (280)
T PF01073_consen 219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP 255 (280)
T ss_pred HHHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence 999998875442 22 456789999998887665
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-17 Score=137.19 Aligned_cols=201 Identities=17% Similarity=0.112 Sum_probs=131.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCH-HHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 92 (272)
..++|++|||||+|+||++++++|+++|++|+++.|+.++..+... ....+.++.+|+++. +++ .+.+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l---~~~~---- 82 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKL---VEAI---- 82 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHH---HHHh----
Confidence 3567999999999999999999999999999999998876543321 123577889999983 333 2222
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC---CCCCChhhHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---HVGSGSIYGA 169 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~---~~~~~~~Y~~ 169 (272)
..++|+||+++|...... . ...+++|+.++.++++++ ++.+.++||++||...+. +.+....|..
T Consensus 83 ~~~~d~vi~~~g~~~~~~--~------~~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~ 150 (251)
T PLN00141 83 GDDSDAVICATGFRRSFD--P------FAPWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYIF 150 (251)
T ss_pred hcCCCEEEECCCCCcCCC--C------CCceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchhH
Confidence 126999999998632111 0 112467888888888876 455668999999986432 2223345666
Q ss_pred HHHHHHHHHHHHHHH--HccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 170 TKAAMNQLTRNLACE--WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 170 sK~a~~~~~~~la~e--l~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
.|.....+...+..| +...+++++.++||++.++....... .. ........+.+++|+|+.+..++..
T Consensus 151 ~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~----~~--~~~~~~~~~i~~~dvA~~~~~~~~~ 220 (251)
T PLN00141 151 LNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIV----ME--PEDTLYEGSISRDQVAEVAVEALLC 220 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEE----EC--CCCccccCcccHHHHHHHHHHHhcC
Confidence 665443332222222 46679999999999987764321100 00 0001122357999999999999864
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.4e-17 Score=141.96 Aligned_cols=216 Identities=12% Similarity=0.119 Sum_probs=144.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCC-CHHHHHHHHHHHHHHcCCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA-SPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~ 95 (272)
|+||||||+|.||++++++|++. |++|+.++|+.+...... . ...+.++.+|++ +.+.+.+++ .+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~---~--~~~~~~~~~Dl~~~~~~~~~~~--------~~ 68 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV---N--HPRMHFFEGDITINKEWIEYHV--------KK 68 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc---c--CCCeEEEeCCCCCCHHHHHHHH--------cC
Confidence 57999999999999999999986 689999998765433221 1 135778889998 666555544 35
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC--------------
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-------------- 161 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-------------- 161 (272)
+|+|||+|+...+.. ..++.+..+++|+.++.+++.++. +.+ .++|++||...+...
T Consensus 69 ~d~ViH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~----~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~ 139 (347)
T PRK11908 69 CDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY 139 (347)
T ss_pred CCEEEECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHHH----hcC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence 899999998643322 122345778999999998888763 344 599999996433210
Q ss_pred ----CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh----h----CHHHHHHHHhcC-------
Q 024125 162 ----GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL----E----NKEFVDKVIART------- 222 (272)
Q Consensus 162 ----~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~----~----~~~~~~~~~~~~------- 222 (272)
.+...|+.+|.+.+.+++.++.+. ++.+..+.|+.+..+...... . -+..........
T Consensus 140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 216 (347)
T PRK11908 140 GPINKPRWIYACSKQLMDRVIWAYGMEE---GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDG 216 (347)
T ss_pred CcCCCccchHHHHHHHHHHHHHHHHHHc---CCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecC
Confidence 122369999999999998887653 677888888766544321100 0 011222222111
Q ss_pred --CCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 223 --PLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 223 --~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
....+..++|+++++..++........|+.+++.++
T Consensus 217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~ 254 (347)
T PRK11908 217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP 254 (347)
T ss_pred CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence 123468899999999988864322245889999874
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.4e-17 Score=136.25 Aligned_cols=212 Identities=22% Similarity=0.256 Sum_probs=153.3
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 99 (272)
||||||+|.||++++++|+++|..|+.+.|+........... ++.+..+|+.+.+.++++++.. .+|+|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~------~~d~v 69 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA------NIDVV 69 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc------CceEE
Confidence 799999999999999999999999887777665543332221 6788899999999999998764 69999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC-----------CCChhhH
Q 024125 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-----------GSGSIYG 168 (272)
Q Consensus 100 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-----------~~~~~Y~ 168 (272)
||+|+.... ..+.+.....++.|+.++.++++++ ++.+..++|++||...+... .+...|+
T Consensus 70 i~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~ 141 (236)
T PF01370_consen 70 IHLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG 141 (236)
T ss_dssp EEEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred EEeeccccc----ccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence 999986321 1123456788888999888888877 44454799999996443322 2346799
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChh---hHhhhhCHHHHHHHHhcCCC---------CCCCCHHHHHHH
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL---VERLLENKEFVDKVIARTPL---------QRVGEPEEVASL 236 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~---~~~~~~~~~~~~~~~~~~~~---------~~~~~~~e~a~~ 236 (272)
.+|...+.+.+.+.++. ++++..+.|+.+-.+. .....-.+.+........+. ..+..++|++++
T Consensus 142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 218 (236)
T PF01370_consen 142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEA 218 (236)
T ss_dssp HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHH
T ss_pred ccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHH
Confidence 99999999999988876 8999999998887766 11000012344444433321 223569999999
Q ss_pred HHHHhcCCCCCccccEEEe
Q 024125 237 VAYLCLPAASYITGQIISV 255 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~ 255 (272)
++.++.... ..|+.++|
T Consensus 219 ~~~~~~~~~--~~~~~yNi 235 (236)
T PF01370_consen 219 IVAALENPK--AAGGIYNI 235 (236)
T ss_dssp HHHHHHHSC--TTTEEEEE
T ss_pred HHHHHhCCC--CCCCEEEe
Confidence 999986433 56888876
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-16 Score=152.32 Aligned_cols=223 Identities=13% Similarity=0.097 Sum_probs=151.0
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHH-HHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ-REKLIQEVG 89 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~ 89 (272)
+....+++||||||+|+||++++++|+++ |++|+.++|......... . ..++.++.+|++|.++ +++++
T Consensus 310 ~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~----~-~~~~~~~~gDl~d~~~~l~~~l---- 380 (660)
T PRK08125 310 CSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL----G-HPRFHFVEGDISIHSEWIEYHI---- 380 (660)
T ss_pred hhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc----C-CCceEEEeccccCcHHHHHHHh----
Confidence 33456899999999999999999999986 799999998765432221 1 1357778899998654 33333
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC--------
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-------- 161 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-------- 161 (272)
..+|+|||+|+...+... .+..+..+++|+.++.++++++.. .+ .++|++||...+...
T Consensus 381 ----~~~D~ViHlAa~~~~~~~----~~~~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~vyg~~~~~~~~E~ 447 (660)
T PRK08125 381 ----KKCDVVLPLVAIATPIEY----TRNPLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSEVYGMCTDKYFDED 447 (660)
T ss_pred ----cCCCEEEECccccCchhh----ccCHHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchhhcCCCCCCCcCcc
Confidence 358999999997543221 122346789999999999988743 34 589999996432210
Q ss_pred ----------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh----h----CHHHHHHHHhcCC
Q 024125 162 ----------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL----E----NKEFVDKVIARTP 223 (272)
Q Consensus 162 ----------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~----~----~~~~~~~~~~~~~ 223 (272)
.+...|+.||.+.+.+++.+++++ ++++..+.|+.+..+...... . -+..........+
T Consensus 448 ~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~ 524 (660)
T PRK08125 448 TSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP 524 (660)
T ss_pred ccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCC
Confidence 112469999999999999887764 688999999887765421110 0 0122222222211
Q ss_pred ---------CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 224 ---------LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 224 ---------~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
...+..++|++++++.++........|+.+++.+|.
T Consensus 525 i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~ 569 (660)
T PRK08125 525 IKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD 569 (660)
T ss_pred eEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence 134567999999998887543233468889988773
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.9e-17 Score=143.42 Aligned_cols=214 Identities=17% Similarity=0.164 Sum_probs=146.2
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH--HHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK--CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
-+++++|||||+|+||++++++|+++|++|++++|+...... ..++.......+.++.+|++|.++++++++..
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---- 133 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---- 133 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh----
Confidence 467899999999999999999999999999999998765421 11111122235778899999999998888653
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+.++|+||||++...... ...+++|+.++.++++++ ++.+.+++|++||..... +...|..+|.
T Consensus 134 ~~~~D~Vi~~aa~~~~~~---------~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~---p~~~~~~sK~ 197 (390)
T PLN02657 134 GDPVDVVVSCLASRTGGV---------KDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQK---PLLEFQRAKL 197 (390)
T ss_pred CCCCcEEEECCccCCCCC---------ccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccC---cchHHHHHHH
Confidence 126999999998532111 123567888887777766 455667999999987543 3456888999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC----------CCCCCCHHHHHHHHHHHhc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTP----------LQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~e~a~~~~~l~~ 242 (272)
..+...+. ...++++..++|+.+...+.. .........+ ...+.+.+|+|+.+..++.
T Consensus 198 ~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~-------~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~ 265 (390)
T PLN02657 198 KFEAELQA-----LDSDFTYSIVRPTAFFKSLGG-------QVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVL 265 (390)
T ss_pred HHHHHHHh-----ccCCCCEEEEccHHHhcccHH-------HHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHh
Confidence 88887644 246899999999866433211 1111111111 1123578899999888875
Q ss_pred CCCCCccccEEEeCC-CcCCC
Q 024125 243 PAASYITGQIISVDG-GFTAN 262 (272)
Q Consensus 243 ~~~~~~~G~~i~~dg-G~~~~ 262 (272)
... ..|+.+++.| |..+.
T Consensus 266 ~~~--~~~~~~~Iggp~~~~S 284 (390)
T PLN02657 266 DES--KINKVLPIGGPGKALT 284 (390)
T ss_pred Ccc--ccCCEEEcCCCCcccC
Confidence 322 3478999976 44443
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.9e-17 Score=134.72 Aligned_cols=150 Identities=22% Similarity=0.205 Sum_probs=121.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++||||||+|.||+|.+.+|++.|++|+++++-.....+.....+ ..+++.|+.|.+.+++++++ .++|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~------~~id 69 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEE------NKID 69 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHh------cCCC
Confidence 479999999999999999999999999999986555444443221 56889999999998888876 3799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CCCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~~~~~~ 166 (272)
.|||.||....+. +.+...+.++.|+.|++.|++++ ++.+..+|||-||.+.+. +..+..+
T Consensus 70 aViHFAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NP 141 (329)
T COG1087 70 AVVHFAASISVGE----SVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINP 141 (329)
T ss_pred EEEECccccccch----hhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCc
Confidence 9999999754443 67778899999999999888876 666777899888865432 3445688
Q ss_pred hHHHHHHHHHHHHHHHHHHc
Q 024125 167 YGATKAAMNQLTRNLACEWA 186 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~ 186 (272)
|+.||.+.|.+.+.+++...
T Consensus 142 YG~sKlm~E~iL~d~~~a~~ 161 (329)
T COG1087 142 YGRSKLMSEEILRDAAKANP 161 (329)
T ss_pred chhHHHHHHHHHHHHHHhCC
Confidence 99999999999999998864
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.9e-16 Score=149.77 Aligned_cols=223 Identities=14% Similarity=0.095 Sum_probs=150.3
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCCh--HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~--G~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.++|+||||||+|+||++++++|+++ +++|+.++|.. +....+... ....++.++.+|++|.+.+..++..
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~--- 78 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT--- 78 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh---
Confidence 45799999999999999999999998 57898888742 222222111 1123677889999998877665432
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCC----------
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS---------- 159 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~---------- 159 (272)
..+|+|||+|+...... +..+....+++|+.++.++++++ ++.+ ..++|++||...+.
T Consensus 79 ---~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~~vyg~~~~~~~~~~ 147 (668)
T PLN02260 79 ---EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDADVGN 147 (668)
T ss_pred ---cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcchHHhCCCccccccCc
Confidence 36999999999743221 22233567899999999988876 3333 46999999964321
Q ss_pred ----CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH--hhhhCHHHHHHHHhcCC---------C
Q 024125 160 ----HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE--RLLENKEFVDKVIARTP---------L 224 (272)
Q Consensus 160 ----~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~---------~ 224 (272)
+..+...|+.+|.+.+.+++.+++++ ++.+..+.|+.+..+-.. ... +.+........+ .
T Consensus 148 ~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~~~~i--~~~~~~a~~g~~i~i~g~g~~~ 222 (668)
T PLN02260 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI--PKFILLAMQGKPLPIHGDGSNV 222 (668)
T ss_pred cccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCcccHH--HHHHHHHhCCCCeEEecCCCce
Confidence 11234679999999999999887764 788899999877665321 110 111222222111 1
Q ss_pred CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 225 QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 225 ~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
..+..++|+++++..++... ..|+++++.++..+
T Consensus 223 r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~ 256 (668)
T PLN02260 223 RSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKER 256 (668)
T ss_pred EeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCee
Confidence 23467999999998877432 24788888877544
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=140.95 Aligned_cols=222 Identities=14% Similarity=0.106 Sum_probs=147.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|.-++|+||||||+|.||+++++.|.++|++|+.++|...... ........++.+|+++.+.+..++
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~------- 83 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVT------- 83 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHH-------
Confidence 3347899999999999999999999999999999998643211 111112456788999988766655
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-------------
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------- 159 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~------------- 159 (272)
..+|+|||+|+.......... +....+..|+.++.++++++ ++.+..++|++||...+.
T Consensus 84 -~~~D~Vih~Aa~~~~~~~~~~---~~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E 155 (370)
T PLN02695 84 -KGVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYPEFKQLETNVSLKE 155 (370)
T ss_pred -hCCCEEEEcccccCCcccccc---CchhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcCCccccCcCCCcCc
Confidence 358999999985432221111 12345678999999888876 444556999999964221
Q ss_pred ----CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-h---CHHHHHHHHh-cCC-------
Q 024125 160 ----HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-E---NKEFVDKVIA-RTP------- 223 (272)
Q Consensus 160 ----~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-~---~~~~~~~~~~-~~~------- 223 (272)
+..+...|+.+|.+.+.+++.++..+ ++.+..+.|+.+..+...... . ...+...... ..+
T Consensus 156 ~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g 232 (370)
T PLN02695 156 SDAWPAEPQDAYGLEKLATEELCKHYTKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDG 232 (370)
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCC
Confidence 22345689999999999999887664 788999999887776321000 0 0112222211 111
Q ss_pred --CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 224 --LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 224 --~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
...+..++|+++++..++... .++.+++-+|..++
T Consensus 233 ~~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~s 269 (370)
T PLN02695 233 KQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 269 (370)
T ss_pred CeEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCcee
Confidence 123467899999998876532 25678887775543
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.6e-16 Score=132.97 Aligned_cols=214 Identities=15% Similarity=0.169 Sum_probs=135.7
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH--HcCCCcc
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS--KFNGKLN 97 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~~~id 97 (272)
||||||+|+||++++++|+++|++++++.|+.+..... .. ...+|+.|..+.+.+++.+.+ .+ +++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~---------~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d 70 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN---------LVDLDIADYMDKEDFLAQIMAGDDF-GDIE 70 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh---------hhhhhhhhhhhHHHHHHHHhccccc-CCcc
Confidence 79999999999999999999999655554443221111 01 123566666555555554432 12 3699
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~~~ 166 (272)
+|||+|+..... ..+. +..++.|+.++.++++++ ++.+ .++|++||...+.. ..+...
T Consensus 71 ~Vih~A~~~~~~---~~~~---~~~~~~n~~~t~~ll~~~----~~~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~ 139 (308)
T PRK11150 71 AIFHEGACSSTT---EWDG---KYMMDNNYQYSKELLHYC----LERE-IPFLYASSAATYGGRTDDFIEEREYEKPLNV 139 (308)
T ss_pred EEEECceecCCc---CCCh---HHHHHHHHHHHHHHHHHH----HHcC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence 999999864322 1122 346899999999988887 3444 37999999753221 223467
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHh--hhhC--HHHHHHHHhcCC----------CCCCCCHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER--LLEN--KEFVDKVIARTP----------LQRVGEPEE 232 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~--~~~~--~~~~~~~~~~~~----------~~~~~~~~e 232 (272)
|+.+|.+.+.+++.++.+ .++.+..+.|+.+-.+.... .... ..+........+ ...+..++|
T Consensus 140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D 216 (308)
T PRK11150 140 YGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGD 216 (308)
T ss_pred HHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHH
Confidence 999999999999887665 36888888887766643211 0000 011122222111 123468999
Q ss_pred HHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 233 VASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 233 ~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+++++..++... .+.++++.+|..++
T Consensus 217 ~a~a~~~~~~~~----~~~~yni~~~~~~s 242 (308)
T PRK11150 217 VAAVNLWFWENG----VSGIFNCGTGRAES 242 (308)
T ss_pred HHHHHHHHHhcC----CCCeEEcCCCCcee
Confidence 999988777432 24588888876544
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.6e-16 Score=133.91 Aligned_cols=212 Identities=23% Similarity=0.249 Sum_probs=144.8
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc-c
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL-N 97 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i-d 97 (272)
.|||||++|+||++++++|.++|++|+.++|......... ..+.++.+|+++.+.....++ .. |
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~--------~~~d 66 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK--------GVPD 66 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh--------cCCC
Confidence 3999999999999999999999999999999765543222 246677889988855554443 23 9
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC-------------CCC
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-------------GSG 164 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-------------~~~ 164 (272)
.|||+|+......... + .....+++|+.++.++++++ ++.+..++|+.||....... .+.
T Consensus 67 ~vih~aa~~~~~~~~~-~--~~~~~~~~nv~gt~~ll~aa----~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~ 139 (314)
T COG0451 67 AVIHLAAQSSVPDSNA-S--DPAEFLDVNVDGTLNLLEAA----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL 139 (314)
T ss_pred EEEEccccCchhhhhh-h--CHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC
Confidence 9999999743322111 1 34568999999999999988 44566799997774433211 111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CHHHHHHHHhcCC-CC---------CCCCHH
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NKEFVDKVIARTP-LQ---------RVGEPE 231 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~-~~---------~~~~~~ 231 (272)
..|+.+|.+.+.+++.++. ..++.+..+.|+.+..+....... ......+.....+ .. .+...+
T Consensus 140 ~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 216 (314)
T COG0451 140 NPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVD 216 (314)
T ss_pred CHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHH
Confidence 2499999999999999888 457899999998766554322111 0112222333332 11 245689
Q ss_pred HHHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 232 EVASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 232 e~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
|+++++..++..... + .+++.++.
T Consensus 217 D~a~~~~~~~~~~~~---~-~~ni~~~~ 240 (314)
T COG0451 217 DVADALLLALENPDG---G-VFNIGSGT 240 (314)
T ss_pred HHHHHHHHHHhCCCC---c-EEEeCCCC
Confidence 999999998864333 2 77777764
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1e-15 Score=133.38 Aligned_cols=206 Identities=13% Similarity=0.075 Sum_probs=137.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++|+||||+|.||++++++|+++|++|.+++|+.+....+. . ..+.++.+|++|++++.+++ ..+|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~--~~v~~v~~Dl~d~~~l~~al--------~g~d 66 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----E--WGAELVYGDLSLPETLPPSF--------KGVT 66 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----h--cCCEEEECCCCCHHHHHHHH--------CCCC
Confidence 37999999999999999999999999999999875543221 1 24677899999999887766 3589
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
+|||+++.... +....+++|+.++.++++++ ++.+..++|++||..... .+...|..+|...+.+
T Consensus 67 ~Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~ 131 (317)
T CHL00194 67 AIIDASTSRPS---------DLYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQK 131 (317)
T ss_pred EEEECCCCCCC---------CccchhhhhHHHHHHHHHHH----HHcCCCEEEEeccccccc--cCCChHHHHHHHHHHH
Confidence 99998864211 12245677888888877776 555667999999864321 1235688899888776
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHH---HHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVD---KVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
.+ ..++.+..+.|+.+...+...+.. +.... +.........+..++|+++.+..++.... ..|++++
T Consensus 132 l~-------~~~l~~tilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~n 201 (317)
T CHL00194 132 LK-------KSGIPYTIFRLAGFFQGLISQYAI-PILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNKTFP 201 (317)
T ss_pred HH-------HcCCCeEEEeecHHhhhhhhhhhh-hhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCcEEE
Confidence 53 247888999998553322211100 00000 00000111233567999999988875322 2489999
Q ss_pred eCCCcCCC
Q 024125 255 VDGGFTAN 262 (272)
Q Consensus 255 ~dgG~~~~ 262 (272)
+-|+..++
T Consensus 202 i~g~~~~s 209 (317)
T CHL00194 202 LVGPKSWN 209 (317)
T ss_pred ecCCCccC
Confidence 98886554
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-15 Score=129.56 Aligned_cols=197 Identities=17% Similarity=0.172 Sum_probs=134.6
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
++|||||+|+||++++++|+++|++|++++|+ .+|+.+.++++++++. .++|+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~------~~~d~ 53 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRA------IRPDA 53 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHh------CCCCE
Confidence 47999999999999999999999999999884 3799999998888754 25899
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCChhh
Q 024125 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSIY 167 (272)
Q Consensus 99 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~~~Y 167 (272)
|||+|+...... .....+..+++|+.++.++++++. +.+ .++|++||...+.+ ..+...|
T Consensus 54 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 124 (287)
T TIGR01214 54 VVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAA----RHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVY 124 (287)
T ss_pred EEECCccccccc----cccCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence 999998643211 122346788999999999988873 334 48999998643221 1234679
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH-hhhhCHHHHHHHHhcCC-------CCCCCCHHHHHHHHHH
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE-RLLENKEFVDKVIARTP-------LQRVGEPEEVASLVAY 239 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~e~a~~~~~ 239 (272)
+.+|.+.+.+++.+ +..+..++|+.+..+... .+. ...........+ ...+...+|+++++..
T Consensus 125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~ 195 (287)
T TIGR01214 125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFV--RTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAA 195 (287)
T ss_pred hHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHH--HHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHH
Confidence 99999999888764 357889999887665421 110 111111111111 1234568999999998
Q ss_pred HhcCCCCCccccEEEeCCCcCCC
Q 024125 240 LCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++.... ..++.+++-++..+.
T Consensus 196 ~~~~~~--~~~~~~ni~~~~~~s 216 (287)
T TIGR01214 196 LLQRLA--RARGVYHLANSGQCS 216 (287)
T ss_pred HHhhcc--CCCCeEEEECCCCcC
Confidence 885321 125666666554433
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.5e-15 Score=136.23 Aligned_cols=214 Identities=16% Similarity=0.144 Sum_probs=140.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH-HHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++++||||||+|+||++++++|+++|++|++++|...... .....+. ..++.++..|+.+.. + .
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~--~~~~~~i~~D~~~~~-----l--------~ 182 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS--NPNFELIRHDVVEPI-----L--------L 182 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc--CCceEEEECCccChh-----h--------c
Confidence 5689999999999999999999999999999887532211 1111111 235666778876542 1 2
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC---------------
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--------------- 159 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~--------------- 159 (272)
.+|+|||+|+...+... .++....+++|+.++.++++++. +.+ .++|++||...+.
T Consensus 183 ~~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gt~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~ 253 (442)
T PLN02206 183 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQVETYWGNV 253 (442)
T ss_pred CCCEEEEeeeecchhhh----hcCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECChHHhCCCCCCCCCccccccC
Confidence 58999999986432211 12345788999999999998873 334 4899999975432
Q ss_pred -CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH----hhhhCHHHHHHHHhcCCC---------C
Q 024125 160 -HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE----RLLENKEFVDKVIARTPL---------Q 225 (272)
Q Consensus 160 -~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~---------~ 225 (272)
+......|+.+|.+.+.+++.+.+.+ ++++..+.|+.+..+... ... ..+..+.....+. .
T Consensus 254 ~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~~~~~~~~~v--~~~i~~~l~~~~i~i~g~G~~~r 328 (442)
T PLN02206 254 NPIGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPRMCIDDGRVV--SNFVAQALRKEPLTVYGDGKQTR 328 (442)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCccccchH--HHHHHHHHcCCCcEEeCCCCEEE
Confidence 11224679999999999998876664 678888887666544311 010 1222222222211 2
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 226 RVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 226 ~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.+..++|++++++.++.. . .+..+++.+|..+.
T Consensus 329 dfi~V~Dva~ai~~a~e~--~--~~g~yNIgs~~~~s 361 (442)
T PLN02206 329 SFQFVSDLVEGLMRLMEG--E--HVGPFNLGNPGEFT 361 (442)
T ss_pred eEEeHHHHHHHHHHHHhc--C--CCceEEEcCCCcee
Confidence 356799999999887742 2 23478888775443
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=131.07 Aligned_cols=146 Identities=16% Similarity=0.165 Sum_probs=105.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++||||||+|.||++++++|+++| +|+.++|... .+..|++|.+.++++++. .++|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~------~~~D 56 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRK------IRPD 56 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHh------cCCC
Confidence 479999999999999999999999 7888887531 134799999998888764 2689
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CCCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~~~~~~ 166 (272)
+|||+|+...... ..++.+..+++|+.++.++++++ ++.+ .++|++||...+. +..+...
T Consensus 57 ~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa----~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~ 127 (299)
T PRK09987 57 VIVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAA----NEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNV 127 (299)
T ss_pred EEEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence 9999999743321 22234567789999999998887 3344 4899999854321 1234467
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccCh
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~ 203 (272)
|+.+|.+.+.+++.+.. +...+.|+++-.+
T Consensus 128 Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp 157 (299)
T PRK09987 128 YGETKLAGEKALQEHCA-------KHLIFRTSWVYAG 157 (299)
T ss_pred HHHHHHHHHHHHHHhCC-------CEEEEecceecCC
Confidence 99999999998866532 2355666655543
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=132.20 Aligned_cols=204 Identities=14% Similarity=0.123 Sum_probs=137.6
Q ss_pred EEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEE
Q 024125 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILV 100 (272)
Q Consensus 21 lItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li 100 (272)
|||||+|+||+++++.|++.|++|+++.+. ..+|+++.++++++++. .++|+||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~------~~~d~Vi 54 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAK------EKPTYVI 54 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhc------cCCCEEE
Confidence 699999999999999999999987766432 13799999988887764 2589999
Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC---------------CCC-C
Q 024125 101 NNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------------VGS-G 164 (272)
Q Consensus 101 ~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~---------------~~~-~ 164 (272)
|+|+...... ...++.+..+++|+.++.++++++ ++.+..++|++||...+.+ ..+ .
T Consensus 55 h~A~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~ 127 (306)
T PLN02725 55 LAAAKVGGIH---ANMTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN 127 (306)
T ss_pred Eeeeeecccc---hhhhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence 9998632111 011223467889999999888887 4455578999999653321 111 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHHHHHHH----Hhc----------CCCCC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDKV----IAR----------TPLQR 226 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~----~~~----------~~~~~ 226 (272)
..|+.+|.+.+.+.+.+.++. ++++..+.|+.+..+....... .+..+..+ ... .....
T Consensus 128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~ 204 (306)
T PLN02725 128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE 204 (306)
T ss_pred chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence 249999999999998887665 7889999998776653210000 01111111 111 11235
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 227 VGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 227 ~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
+..++|+++++..++... ..++.+++.+|..++.
T Consensus 205 ~i~v~Dv~~~~~~~~~~~---~~~~~~ni~~~~~~s~ 238 (306)
T PLN02725 205 FLHVDDLADAVVFLMRRY---SGAEHVNVGSGDEVTI 238 (306)
T ss_pred cccHHHHHHHHHHHHhcc---ccCcceEeCCCCcccH
Confidence 678999999999888532 1245668888876553
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.67 E-value=8e-15 Score=132.68 Aligned_cols=217 Identities=15% Similarity=0.082 Sum_probs=139.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
..++||||||+|+||++++++|+++|++|++++|...........+.. ..++.++..|+.+.. + ..
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~-----~--------~~ 184 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI-----L--------LE 184 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc-----c--------cC
Confidence 357899999999999999999999999999998753221111111111 125666777875531 1 25
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC----------------
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---------------- 159 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~---------------- 159 (272)
+|+|||+|+....... ..+....+++|+.++.+++.++. +.+ .++|++||...+.
T Consensus 185 ~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gT~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~ 255 (436)
T PLN02166 185 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVN 255 (436)
T ss_pred CCEEEECceeccchhh----ccCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECcHHHhCCCCCCCCCccccccCC
Confidence 8999999986433221 12335788999999999988874 333 4899999865322
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--CHHHHHHHHhcCC---------CCCCC
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--NKEFVDKVIARTP---------LQRVG 228 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~---------~~~~~ 228 (272)
+..+...|+.+|.+.+.+++.+++.. ++++..+.|+.+-.+....... -..++.......+ ...+.
T Consensus 256 p~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi 332 (436)
T PLN02166 256 PIGERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQ 332 (436)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeE
Confidence 12224569999999999999887654 6788878876665543110000 0112222222222 12356
Q ss_pred CHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 229 EPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 229 ~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.++|+++++..++... .+..+++.+|..+.
T Consensus 333 ~V~Dva~ai~~~~~~~----~~giyNIgs~~~~S 362 (436)
T PLN02166 333 YVSDLVDGLVALMEGE----HVGPFNLGNPGEFT 362 (436)
T ss_pred EHHHHHHHHHHHHhcC----CCceEEeCCCCcEe
Confidence 7999999998887422 23478887775443
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.7e-15 Score=127.78 Aligned_cols=216 Identities=15% Similarity=0.127 Sum_probs=138.8
Q ss_pred EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
||||||+|+||+++++.|.++|+ +|++++|..... .+. ++. . ..+..|+++.+.++.+.+. .+ .++|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~---~--~~~~~d~~~~~~~~~~~~~---~~-~~~D~ 69 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLA---D--LVIADYIDKEDFLDRLEKG---AF-GKIEA 69 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhh---h--eeeeccCcchhHHHHHHhh---cc-CCCCE
Confidence 68999999999999999999998 788887654321 111 111 1 2345677777666555542 22 47999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCChhh
Q 024125 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSIY 167 (272)
Q Consensus 99 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~~~Y 167 (272)
|||+|+.... ..++.+..+++|+.++.++++++. +.+ .++|++||...+.. ..+...|
T Consensus 70 vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y 138 (314)
T TIGR02197 70 IFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCA----EKG-IPFIYASSAATYGDGEAGFREGRELERPLNVY 138 (314)
T ss_pred EEECccccCc------cccchHHHHHHHHHHHHHHHHHHH----HhC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence 9999996321 223456788999999999998873 334 48999999654321 1245689
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--C--HHHHHHHHhcCC---------------CCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--N--KEFVDKVIARTP---------------LQRVG 228 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--~--~~~~~~~~~~~~---------------~~~~~ 228 (272)
+.+|.+.+.+++.+..+. ..++++..+.|+.+..+-...... . ...........+ ...+.
T Consensus 139 ~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 217 (314)
T TIGR02197 139 GYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFV 217 (314)
T ss_pred HHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeE
Confidence 999999999998754332 225677777776655543110000 0 111222221111 12356
Q ss_pred CHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 229 EPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 229 ~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..+|+++++..++.. ..+..+++.++..++
T Consensus 218 ~v~D~a~~i~~~~~~----~~~~~yni~~~~~~s 247 (314)
T TIGR02197 218 YVKDVVDVNLWLLEN----GVSGIFNLGTGRARS 247 (314)
T ss_pred EHHHHHHHHHHHHhc----ccCceEEcCCCCCcc
Confidence 799999999988854 246688888876554
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.9e-15 Score=125.12 Aligned_cols=156 Identities=26% Similarity=0.274 Sum_probs=125.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh---CCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS---KGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++||||||+|.||+|.+.+|+++|+.|++++.-.....+..+.+++ .+..+.++..|+.|.+.+++++++.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 58999999999999999999999999999998755444444333332 2578999999999999999999874
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVG 162 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~~ 162 (272)
++|.|+|-|+....+. +.+.....++.|+.|+++++... ++.+...+|+.||...+. +..
T Consensus 77 -~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~t~ 147 (343)
T KOG1371|consen 77 -KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDPTD 147 (343)
T ss_pred -CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCCCC
Confidence 6999999999754443 55556789999999999887765 556667999999866432 223
Q ss_pred -CChhhHHHHHHHHHHHHHHHHHHc
Q 024125 163 -SGSIYGATKAAMNQLTRNLACEWA 186 (272)
Q Consensus 163 -~~~~Y~~sK~a~~~~~~~la~el~ 186 (272)
+.+.|+.+|.+++.....+.+.+.
T Consensus 148 ~p~~pyg~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 148 QPTNPYGKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred CCCCcchhhhHHHHHHHHhhhcccc
Confidence 678999999999999999988775
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.9e-14 Score=135.98 Aligned_cols=220 Identities=20% Similarity=0.140 Sum_probs=140.6
Q ss_pred CEEEEeCCCChHHHHHHHHHH--HCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCHHHH--HHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELA--GLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQR--EKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~--~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~--~~~~~~~~~~~ 92 (272)
++||||||+|+||++++++|+ ++|++|++++|+... ..........+ .++..+.+|+++.+.. ...++++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---- 75 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---- 75 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence 379999999999999999999 578999999996432 22222111111 4678889999985310 1112222
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC------------
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------ 160 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~------------ 160 (272)
..+|+|||||+..... .+ .....++|+.++.++++++ ++.+..++|++||...+..
T Consensus 76 -~~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~ 143 (657)
T PRK07201 76 -GDIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAVAGDYEGVFREDDFDE 143 (657)
T ss_pred -cCCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEeccccccCccCccccccchh
Confidence 3699999999964321 12 2456788999998887776 4455579999999765321
Q ss_pred -CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH----hhhhC---HHHHHHHHhc---CC------
Q 024125 161 -VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE----RLLEN---KEFVDKVIAR---TP------ 223 (272)
Q Consensus 161 -~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~----~~~~~---~~~~~~~~~~---~~------ 223 (272)
......|+.+|...+.+++. ..++.+..+.|+.+..+-.. ..... .......... .+
T Consensus 144 ~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (657)
T PRK07201 144 GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG 217 (657)
T ss_pred hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence 11235699999999998753 24789999999988654211 00000 0011111000 01
Q ss_pred -CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 224 -LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 224 -~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
...+..++++++++..++.. ....|+.+++-++..+.
T Consensus 218 ~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~~s 255 (657)
T PRK07201 218 GRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKPQR 255 (657)
T ss_pred CeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCCCc
Confidence 11235689999999888753 33568999998775544
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.1e-14 Score=127.67 Aligned_cols=221 Identities=18% Similarity=0.112 Sum_probs=142.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHH---HHHHHHHH---------Hh-C--------CCeEEE
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVE---LNKCLKEW---------QS-K--------GFVVSG 70 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~---~v~~~~r~~~~---~~~~~~~~---------~~-~--------~~~~~~ 70 (272)
++||+||||||||+||+++++.|++.+. +|+++.|.... .+.+..++ .+ . ..++.+
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 6899999999999999999999998643 57888775421 11111111 11 0 147888
Q ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc
Q 024125 71 SVCDAAS-------PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA 143 (272)
Q Consensus 71 ~~~D~~~-------~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 143 (272)
+..|+++ .+..++++ ..+|+|||+|+..... +..+..+++|+.|+.++++.+...
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~--------~~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 150 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMW--------KEIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC--- 150 (491)
T ss_pred EecccCCcCCCCChHHHHHHHH--------hCCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc---
Confidence 9999984 33344444 3589999999964321 235678899999999988877331
Q ss_pred CCCCeEEEecCCCCCCCC--------------------------------------------------------------
Q 024125 144 SGVGSIVFISSVGGLSHV-------------------------------------------------------------- 161 (272)
Q Consensus 144 ~~~g~ii~vsS~~~~~~~-------------------------------------------------------------- 161 (272)
.+..+++++||.......
T Consensus 151 ~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (491)
T PLN02996 151 VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLH 230 (491)
T ss_pred CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhC
Confidence 234589999986543110
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-------HHHHHHHHhcCC---------CC
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-------KEFVDKVIARTP---------LQ 225 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~---------~~ 225 (272)
.....|+.||++.|.+++.++ .++.+..+.|+.|..+........ ............ ..
T Consensus 231 ~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~ 305 (491)
T PLN02996 231 GWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVL 305 (491)
T ss_pred CCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeec
Confidence 012459999999999997653 278999999988866543221110 111111111111 24
Q ss_pred CCCCHHHHHHHHHHHhcCCC-CCccccEEEeCCC
Q 024125 226 RVGEPEEVASLVAYLCLPAA-SYITGQIISVDGG 258 (272)
Q Consensus 226 ~~~~~~e~a~~~~~l~~~~~-~~~~G~~i~~dgG 258 (272)
.+..+++++++++.++.... ....++++++.+|
T Consensus 306 D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~ 339 (491)
T PLN02996 306 DVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS 339 (491)
T ss_pred ceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence 45678999999987765321 1124678899877
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.1e-14 Score=133.60 Aligned_cols=181 Identities=18% Similarity=0.187 Sum_probs=128.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++++||||+|+||++++++|+++|++|++++|+.... . ...+.++.+|++|.+++.++++ .+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~--------~vD 63 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT--------GAD 63 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh--------CCC
Confidence 4699999999999999999999999999999875321 1 1246678899999998877773 589
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
+|||||+.... .+++|+.++.++++++ ++.+.++||++||.. |.+.+.+
T Consensus 64 ~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~--------------K~aaE~l 112 (854)
T PRK05865 64 VVAHCAWVRGR-------------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH--------------QPRVEQM 112 (854)
T ss_pred EEEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH--------------HHHHHHH
Confidence 99999985311 4678999988776654 566667999999853 8877776
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHh--cCCC------CCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIA--RTPL------QRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
.+ + .++.+..+.|+.+..+-...+ ...... ..+. ..+..++|+++++..++... ...
T Consensus 113 l~----~---~gl~~vILRp~~VYGP~~~~~------i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~--~~~ 177 (854)
T PRK05865 113 LA----D---CGLEWVAVRCALIFGRNVDNW------VQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT--VID 177 (854)
T ss_pred HH----H---cCCCEEEEEeceEeCCChHHH------HHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCC--CcC
Confidence 53 2 478999999998876542211 111111 0111 13567899999998887422 123
Q ss_pred ccEEEeCCCcCC
Q 024125 250 GQIISVDGGFTA 261 (272)
Q Consensus 250 G~~i~~dgG~~~ 261 (272)
|..+++-+|..+
T Consensus 178 ggvyNIgsg~~~ 189 (854)
T PRK05865 178 SGPVNLAAPGEL 189 (854)
T ss_pred CCeEEEECCCcc
Confidence 567888777543
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-13 Score=109.76 Aligned_cols=172 Identities=18% Similarity=0.157 Sum_probs=124.9
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 99 (272)
|+|+||+|.+|+.++++|+++|++|+++.|++++.++ ...+..+.+|+.|.+++.+.+ .+.|++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al--------~~~d~v 64 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAAL--------KGADAV 64 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHH--------TTSSEE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhh--------hhcchh
Confidence 7999999999999999999999999999999987665 357888999999998888777 479999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC---------hhhHHH
Q 024125 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG---------SIYGAT 170 (272)
Q Consensus 100 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~---------~~Y~~s 170 (272)
|+++|.... + ...++.++..+++.+..++|++||.......+.. ..|...
T Consensus 65 i~~~~~~~~---------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (183)
T PF13460_consen 65 IHAAGPPPK---------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD 123 (183)
T ss_dssp EECCHSTTT---------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred hhhhhhhcc---------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence 999985322 1 3445566666677777899999998766543331 356666
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
|...+.+. ...+++...++|+++..+......-... .......+.+.+|+|+.++.++
T Consensus 124 ~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~------~~~~~~~~i~~~DvA~~~~~~l 181 (183)
T PF13460_consen 124 KREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKE------GGPQGVNFISREDVAKAIVEAL 181 (183)
T ss_dssp HHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESS------TSTTSHCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEec------cCCCCcCcCCHHHHHHHHHHHh
Confidence 66555433 2348999999999886665221100000 1112224568899999998876
|
... |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.7e-12 Score=112.19 Aligned_cols=196 Identities=16% Similarity=0.149 Sum_probs=120.5
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.+++|||||+|+||+++++.|+++|++|+... .|+++.+.+...++. .++
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~------~~~ 58 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA------VKP 58 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh------cCC
Confidence 47899999999999999999999999886432 244555555554443 268
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC--CC------------C---
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG--GL------------S--- 159 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~--~~------------~--- 159 (272)
|+|||+|+...... .+...++....+++|+.++.++++++. +.+. +.+++||.. +. .
T Consensus 59 D~ViH~Aa~~~~~~-~~~~~~~p~~~~~~Nv~gt~~ll~aa~----~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~ 132 (298)
T PLN02778 59 THVFNAAGVTGRPN-VDWCESHKVETIRANVVGTLTLADVCR----ERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEED 132 (298)
T ss_pred CEEEECCcccCCCC-chhhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CEEEEecceEeCCCCCCCcccCCCCCcCC
Confidence 99999999753321 112224456789999999999999883 3333 344454422 11 0
Q ss_pred -CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEE-eeCCcccChhhHhhhhCHHHHHHHHhcCC---C-CCCCCHHHH
Q 024125 160 -HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS-VAPWYTKTSLVERLLENKEFVDKVIARTP---L-QRVGEPEEV 233 (272)
Q Consensus 160 -~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~-v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~e~ 233 (272)
+.+....|+.||.+.+.+++.++.. .++|+.. +.++.. .... +........+ . ..+...+|+
T Consensus 133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~~~~~~~~~~---~~~~------fi~~~~~~~~~~~~~~s~~yv~D~ 200 (298)
T PLN02778 133 TPNFTGSFYSKTKAMVEELLKNYENV---CTLRVRMPISSDLS---NPRN------FITKITRYEKVVNIPNSMTILDEL 200 (298)
T ss_pred CCCCCCCchHHHHHHHHHHHHHhhcc---EEeeecccCCcccc---cHHH------HHHHHHcCCCeeEcCCCCEEHHHH
Confidence 1112367999999999999887533 2444422 112111 0011 1222222111 1 235678899
Q ss_pred HHHHHHHhcCCCCCccccEEEeCCCcCCCCC
Q 024125 234 ASLVAYLCLPAASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 234 a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~~ 264 (272)
+++++.++... .+ ..+++.+|..++..
T Consensus 201 v~al~~~l~~~---~~-g~yNigs~~~iS~~ 227 (298)
T PLN02778 201 LPISIEMAKRN---LT-GIYNFTNPGVVSHN 227 (298)
T ss_pred HHHHHHHHhCC---CC-CeEEeCCCCcccHH
Confidence 98888887432 23 48889777665543
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.5e-13 Score=112.52 Aligned_cols=184 Identities=14% Similarity=0.096 Sum_probs=148.4
Q ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC-
Q 024125 17 GMTALVTGG-TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG- 94 (272)
Q Consensus 17 ~k~vlItGa-~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~- 94 (272)
..+|||.|. +.-|++.+|..|-++|+.|+++..+.++.+....+- ..++.....|..++.++...+.++.+....
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p 79 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRP 79 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence 457899995 899999999999999999999999888766554432 345666677877777777776666665421
Q ss_pred ------------CccEEEECCCC-CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc---CCCCeEEEecCCCCC
Q 024125 95 ------------KLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA---SGVGSIVFISSVGGL 158 (272)
Q Consensus 95 ------------~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~~~g~ii~vsS~~~~ 158 (272)
++..||..... ...++++.++.++|.+.++.|+.-++.+++.++|+++. ++...|++.-|+...
T Consensus 80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ss 159 (299)
T PF08643_consen 80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSS 159 (299)
T ss_pred CCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhc
Confidence 34566666654 46789999999999999999999999999999999988 443445555678788
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccCh
Q 024125 159 SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (272)
Q Consensus 159 ~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~ 203 (272)
...+..++-.+...++.+|.++|++|+.+.+|.|..+..|.++-.
T Consensus 160 l~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 160 LNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG 204 (299)
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence 888889999999999999999999999999999999998876554
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.7e-13 Score=116.21 Aligned_cols=227 Identities=18% Similarity=0.137 Sum_probs=146.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+..++|||||+|++|++++++|.+++ .++.+++.......-..+.......++..+.+|+.+..++...+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~-------- 74 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAF-------- 74 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhc--------
Confidence 46799999999999999999999998 58999887654211111111113568888999999998887777
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC------------CC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------HV 161 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~------------~~ 161 (272)
... .++|||+...+.. -..+-+..+++|+.|+.+++.++ .+.+..++|++||..... ++
T Consensus 75 ~~~-~Vvh~aa~~~~~~----~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~ 145 (361)
T KOG1430|consen 75 QGA-VVVHCAASPVPDF----VENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIINGDESLPY 145 (361)
T ss_pred cCc-eEEEeccccCccc----cccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccCCCCCCC
Confidence 346 7777777533332 22356788999999998888777 666778999999976422 23
Q ss_pred CCC--hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH-HHHHHHHhcCCCC------CCCCHHH
Q 024125 162 GSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK-EFVDKVIARTPLQ------RVGEPEE 232 (272)
Q Consensus 162 ~~~--~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~e 232 (272)
|.. ..|+.||+-.|.+++..+. .......+++|-.+-.|--+...+.- +...........+ .+...+-
T Consensus 146 p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~N 222 (361)
T KOG1430|consen 146 PLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGEN 222 (361)
T ss_pred ccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEech
Confidence 322 5899999999998876654 34688899999776665543332110 0111001111111 1111222
Q ss_pred HHHH--HHHHh-cCCCCCccccEEEeCCCcCCC
Q 024125 233 VASL--VAYLC-LPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 233 ~a~~--~~~l~-~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++.+ +.... .+.....+||...+..|...+
T Consensus 223 va~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~ 255 (361)
T KOG1430|consen 223 VAWAHILAARALLDKSPSVNGQFYFITDDTPVR 255 (361)
T ss_pred hHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence 2222 22222 236778899999988886554
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.5e-14 Score=121.88 Aligned_cols=203 Identities=17% Similarity=0.196 Sum_probs=125.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+++||||++|.||+++.++|.++|++|+.++|. ..|++|.+++.+++.+. ++|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~------~pd 53 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF------KPD 53 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--------S
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh------CCC
Confidence 479999999999999999999999999999876 57999999998888764 699
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~~~ 166 (272)
+|||||+..... ...++.+..+.+|+.++.++.+.+ .+.+ .++|++||...+.+ ..+...
T Consensus 54 ~Vin~aa~~~~~----~ce~~p~~a~~iN~~~~~~la~~~----~~~~-~~li~~STd~VFdG~~~~~y~E~d~~~P~~~ 124 (286)
T PF04321_consen 54 VVINCAAYTNVD----ACEKNPEEAYAINVDATKNLAEAC----KERG-ARLIHISTDYVFDGDKGGPYTEDDPPNPLNV 124 (286)
T ss_dssp EEEE------HH----HHHHSHHHHHHHHTHHHHHHHHHH----HHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSH
T ss_pred eEeccceeecHH----hhhhChhhhHHHhhHHHHHHHHHH----HHcC-CcEEEeeccEEEcCCcccccccCCCCCCCCH
Confidence 999999873111 122346778999999999988887 3333 69999999654322 233578
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcC-------CCCCCCCHHHHHHHHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIART-------PLQRVGEPEEVASLVAY 239 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~e~a~~~~~ 239 (272)
|+.+|...|..++.. .+ +...++++++-.+-...+. ........... ........+|+|+.+..
T Consensus 125 YG~~K~~~E~~v~~~----~~---~~~IlR~~~~~g~~~~~~~--~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~ 195 (286)
T PF04321_consen 125 YGRSKLEGEQAVRAA----CP---NALILRTSWVYGPSGRNFL--RWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILE 195 (286)
T ss_dssp HHHHHHHHHHHHHHH-----S---SEEEEEE-SEESSSSSSHH--HHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh----cC---CEEEEecceecccCCCchh--hhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHH
Confidence 999999999987662 12 4666777776555211111 11122222111 12234568999999999
Q ss_pred HhcCC-CCCccccEEEeCCCcCCCCCC
Q 024125 240 LCLPA-ASYITGQIISVDGGFTANGFN 265 (272)
Q Consensus 240 l~~~~-~~~~~G~~i~~dgG~~~~~~~ 265 (272)
++... .+.....++++.|.-.++.|+
T Consensus 196 l~~~~~~~~~~~Giyh~~~~~~~S~~e 222 (286)
T PF04321_consen 196 LIEKNLSGASPWGIYHLSGPERVSRYE 222 (286)
T ss_dssp HHHHHHH-GGG-EEEE---BS-EEHHH
T ss_pred HHHhcccccccceeEEEecCcccCHHH
Confidence 98532 222235677777665555443
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.7e-13 Score=111.10 Aligned_cols=199 Identities=15% Similarity=0.154 Sum_probs=132.4
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
++||||++|-+|.++++.|. .+.+|+.++|.+ +|++|.+.+.+++.+. ++|+
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~------~PDv 53 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET------RPDV 53 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh------CCCE
Confidence 39999999999999999998 668999888754 6999999999999874 7999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCChhh
Q 024125 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSIY 167 (272)
Q Consensus 99 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~~~Y 167 (272)
|||+|+...... ...+-+.-+.+|..++.++.+++ ++.+ .++|++|+-..+-+ ..+...|
T Consensus 54 VIn~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa----~~~g-a~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvY 124 (281)
T COG1091 54 VINAAAYTAVDK----AESEPELAFAVNATGAENLARAA----AEVG-ARLVHISTDYVFDGEKGGPYKETDTPNPLNVY 124 (281)
T ss_pred EEECcccccccc----ccCCHHHHHHhHHHHHHHHHHHH----HHhC-CeEEEeecceEecCCCCCCCCCCCCCCChhhh
Confidence 999999743322 33346789999999999999987 3333 79999998654322 3445789
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHH-------hcCCCCCCCCHHHHHHHHHHH
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVI-------ARTPLQRVGEPEEVASLVAYL 240 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~e~a~~~~~l 240 (272)
+.||.+-|..++... ++ ...+...|+-.+-..++.. ..+.... .....+.....+++|+.+..+
T Consensus 125 G~sKl~GE~~v~~~~----~~---~~I~Rtswv~g~~g~nFv~--tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~l 195 (281)
T COG1091 125 GRSKLAGEEAVRAAG----PR---HLILRTSWVYGEYGNNFVK--TMLRLAKEGKELKVVDDQYGSPTYTEDLADAILEL 195 (281)
T ss_pred hHHHHHHHHHHHHhC----CC---EEEEEeeeeecCCCCCHHH--HHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHH
Confidence 999999999887654 22 2233333333322111100 0000001 112234456789999999998
Q ss_pred hcCCCCCccccEEEeCCCcCCCCCCC
Q 024125 241 CLPAASYITGQIISVDGGFTANGFNP 266 (272)
Q Consensus 241 ~~~~~~~~~G~~i~~dgG~~~~~~~~ 266 (272)
+...... | ++.+.+--..++|+.
T Consensus 196 l~~~~~~--~-~yH~~~~g~~Swydf 218 (281)
T COG1091 196 LEKEKEG--G-VYHLVNSGECSWYEF 218 (281)
T ss_pred HhccccC--c-EEEEeCCCcccHHHH
Confidence 8654332 3 443333323555543
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.8e-13 Score=112.68 Aligned_cols=159 Identities=17% Similarity=0.173 Sum_probs=97.8
Q ss_pred EeCCCChHHHHHHHHHHHCCC--EEEEeeCChHH---HHHHHHHHH----------hCCCeEEEEEecCCCHH------H
Q 024125 22 VTGGTRGIGQATVEELAGLGA--VVHTCSRNEVE---LNKCLKEWQ----------SKGFVVSGSVCDAASPD------Q 80 (272)
Q Consensus 22 ItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~---~~~~~~~~~----------~~~~~~~~~~~D~~~~~------~ 80 (272)
||||||+||.++.++|++++. +|+++.|.... .+++.+.+. ....++.++..|++++. +
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 89999987532 233322221 12568999999999853 3
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS- 159 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~- 159 (272)
.+.+. ..+|+|||||+...... .+++..++|+.|+.++++.+ ...+..+++++||.....
T Consensus 81 ~~~L~--------~~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la----~~~~~~~~~~iSTa~v~~~ 141 (249)
T PF07993_consen 81 YQELA--------EEVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLA----AQGKRKRFHYISTAYVAGS 141 (249)
T ss_dssp HHHHH--------HH--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHH----TSSS---EEEEEEGGGTTS
T ss_pred hhccc--------cccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHH----HhccCcceEEeccccccCC
Confidence 33333 35899999999642221 23457789999999888876 334445999999932111
Q ss_pred -C------------------CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccC
Q 024125 160 -H------------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202 (272)
Q Consensus 160 -~------------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t 202 (272)
. ......|..||...|.+++..+.+. |+.+..++||.+-.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 142 RPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVG 200 (249)
T ss_dssp -TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-
T ss_pred CCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCcccc
Confidence 1 1223679999999999999888763 78899999997766
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.5e-11 Score=93.51 Aligned_cols=217 Identities=17% Similarity=0.158 Sum_probs=153.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-CC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-GK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~ 95 (272)
-.+|+|.|+-|.+|++++++|..+++-|.-++-.+.+.. ..-+.+..|-+=.++-+.+++++.+.+. .+
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A----------d~sI~V~~~~swtEQe~~v~~~vg~sL~gek 72 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEK 72 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc----------cceEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence 468999999999999999999999998888776543211 1112334444445667777877777654 36
Q ss_pred ccEEEECCCCCCCCCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYS-AEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
+|.|+|.||.+..+.-..-+ ...-+-++...+.....-.+....+++ .+|-+-..+.-.+..+.|++-.|+++|+|+
T Consensus 73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK--~GGLL~LtGAkaAl~gTPgMIGYGMAKaAV 150 (236)
T KOG4022|consen 73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK--PGGLLQLTGAKAALGGTPGMIGYGMAKAAV 150 (236)
T ss_pred cceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC--CCceeeecccccccCCCCcccchhHHHHHH
Confidence 99999999875444322111 122345566666666555555555543 336777777778888999999999999999
Q ss_pred HHHHHHHHHHHc--cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 175 NQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 175 ~~~~~~la~el~--~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
++++++|+.+-. +.|--+.+|.|=..+|||.++++++.++ ..+...+.++....-...+...--+|..
T Consensus 151 HqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf----------ssWTPL~fi~e~flkWtt~~~RPssGsL 220 (236)
T KOG4022|consen 151 HQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF----------SSWTPLSFISEHFLKWTTETSRPSSGSL 220 (236)
T ss_pred HHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcc----------cCcccHHHHHHHHHHHhccCCCCCCCce
Confidence 999999998742 3367788999999999999998876443 3345667888888777766666566766
Q ss_pred EEe
Q 024125 253 ISV 255 (272)
Q Consensus 253 i~~ 255 (272)
+.+
T Consensus 221 lqi 223 (236)
T KOG4022|consen 221 LQI 223 (236)
T ss_pred EEE
Confidence 544
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.3e-11 Score=125.13 Aligned_cols=226 Identities=18% Similarity=0.212 Sum_probs=141.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCC----CEEEEeeCChHHH---HHHHHHHHhC-------CCeEEEEEecCCCHHH--
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLG----AVVHTCSRNEVEL---NKCLKEWQSK-------GFVVSGSVCDAASPDQ-- 80 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G----~~v~~~~r~~~~~---~~~~~~~~~~-------~~~~~~~~~D~~~~~~-- 80 (272)
.++|||||++|+||.+++++|++++ .+|+.+.|+.... +.+.+..... ..++.++..|++++.-
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5889999999999999999999987 6888888874332 2222222111 1367888999975420
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH 160 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~ 160 (272)
-....+++. ..+|+|||||+.... ..+ +......|+.|+.++++.+ .+.+..+++++||......
T Consensus 1051 ~~~~~~~l~----~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~vSS~~v~~~ 1115 (1389)
T TIGR03443 1051 SDEKWSDLT----NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLC----AEGKAKQFSFVSSTSALDT 1115 (1389)
T ss_pred CHHHHHHHH----hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHH----HhCCCceEEEEeCeeecCc
Confidence 011122221 369999999986421 112 3344567999999888876 3344468999999644310
Q ss_pred ----------------------------CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH
Q 024125 161 ----------------------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK 212 (272)
Q Consensus 161 ----------------------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~ 212 (272)
......|+.||.+.+.+++.++. .|+.+..+.||.+..+.........
T Consensus 1116 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~ 1191 (1389)
T TIGR03443 1116 EYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATNTD 1191 (1389)
T ss_pred ccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCCch
Confidence 00124599999999999876543 3899999999988665322211111
Q ss_pred HHHHHHHh------cCC----CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 213 EFVDKVIA------RTP----LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 213 ~~~~~~~~------~~~----~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
++...... ..| ...+..+++++++++.++........+.++++.++..+
T Consensus 1192 ~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~ 1250 (1389)
T TIGR03443 1192 DFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRI 1250 (1389)
T ss_pred hHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCC
Confidence 22111111 112 23456799999999988754322233557777666443
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.8e-12 Score=105.17 Aligned_cols=213 Identities=16% Similarity=0.076 Sum_probs=148.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH----HHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK----CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++|++||||-||--|.-+|+.|+++|+.|..+.|+...... +.+.-.....+++++..|++|..++.++++++
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v--- 77 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV--- 77 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence 36999999999999999999999999999998876433221 11111223456889999999999999999875
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC-----------CCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG-----------LSH 160 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~-----------~~~ 160 (272)
.+|-|+|.|+.+..+ .+.++.+.+.+++..|+++++.++.-+- .+.-++...||..- ..+
T Consensus 78 ---~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TP 148 (345)
T COG1089 78 ---QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTP 148 (345)
T ss_pred ---Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCC
Confidence 699999999975443 4667778899999999999998873322 22246666665321 235
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccC---CeeEEEeeCCcccChhhHhhhhCHHHHHHH----------HhcCCCCCC
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKD---NIRTNSVAPWYTKTSLVERLLENKEFVDKV----------IARTPLQRV 227 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~---~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~----------~~~~~~~~~ 227 (272)
+.+.++|+++|....-++..++..|.-+ ||-+|.=+|.--.|=.++++-. ....+ .+..-.+.+
T Consensus 149 FyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~---ava~Ik~G~q~~l~lGNldAkRDW 225 (345)
T COG1089 149 FYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITR---AVARIKLGLQDKLYLGNLDAKRDW 225 (345)
T ss_pred CCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHH---HHHHHHccccceEEeccccccccc
Confidence 6778999999999999999998887544 6777777775222222222211 11111 112234556
Q ss_pred CCHHHHHHHHHHHhcC
Q 024125 228 GEPEEVASLVAYLCLP 243 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~ 243 (272)
+-..|.+++++.+++.
T Consensus 226 G~A~DYVe~mwlmLQq 241 (345)
T COG1089 226 GHAKDYVEAMWLMLQQ 241 (345)
T ss_pred cchHHHHHHHHHHHcc
Confidence 7778888888888763
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=106.86 Aligned_cols=165 Identities=19% Similarity=0.196 Sum_probs=117.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChH---HHHHHHHHHH-------hCCCeEEEEEecCCC------HHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEV---ELNKCLKEWQ-------SKGFVVSGSVCDAAS------PDQ 80 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~---~~~~~~~~~~-------~~~~~~~~~~~D~~~------~~~ 80 (272)
+++|+|||||++|..+.+.|+.+- ++|++..|-.. ..+++.+.+. ....++..+..|++. ...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 579999999999999999999774 58888877433 2334444443 225688889999984 333
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH 160 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~ 160 (272)
.+.+. ..+|.||||++.... .....+....|+.|+..+++.+ ...+...+.+|||++....
T Consensus 81 ~~~La--------~~vD~I~H~gA~Vn~-------v~pYs~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~~~ 141 (382)
T COG3320 81 WQELA--------ENVDLIIHNAALVNH-------VFPYSELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVGET 141 (382)
T ss_pred HHHHh--------hhcceEEecchhhcc-------cCcHHHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeeccc
Confidence 33333 469999999985321 1124567789999998888765 3334345999999774321
Q ss_pred --------------------CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhh
Q 024125 161 --------------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (272)
Q Consensus 161 --------------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~ 205 (272)
......|+-||.+.|.+++..... |..+..+.||++-.+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I~gds~ 202 (382)
T COG3320 142 EYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYITGDSR 202 (382)
T ss_pred cccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCeeeccCc
Confidence 122377999999999988665444 89999999998866554
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.7e-11 Score=115.84 Aligned_cols=200 Identities=14% Similarity=0.129 Sum_probs=122.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.++||||||+|.||+++++.|.++|++|... ..|++|.+.+.+.++.. ++
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------------~~~l~d~~~v~~~i~~~------~p 429 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------------KGRLEDRSSLLADIRNV------KP 429 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEee------------------------ccccccHHHHHHHHHhh------CC
Confidence 4679999999999999999999999877311 13677888777666542 69
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------C-----
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------H----- 160 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~----- 160 (272)
|+|||+|+...... .+...++.+..+++|+.++.++++++. +.+. +++++||...+. +
T Consensus 430 d~Vih~Aa~~~~~~-~~~~~~~~~~~~~~N~~gt~~l~~a~~----~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~ 503 (668)
T PLN02260 430 THVFNAAGVTGRPN-VDWCESHKVETIRANVVGTLTLADVCR----ENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEED 503 (668)
T ss_pred CEEEECCcccCCCC-CChHHhCHHHHHHHHhHHHHHHHHHHH----HcCC-eEEEEcccceecCCcccccccCCCCCcCC
Confidence 99999999743221 122334567889999999999999883 3443 456665532110 1
Q ss_pred --CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccC--hhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHH
Q 024125 161 --VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT--SLVERLLENKEFVDKVIARTPLQRVGEPEEVASL 236 (272)
Q Consensus 161 --~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~ 236 (272)
.+....|+.||.+.+.+++.+... ..+++..+..+.... .+...+..... .-..| ......+++..+
T Consensus 504 ~~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~~~~~~~~~nfv~~~~~~~~-----~~~vp-~~~~~~~~~~~~ 574 (668)
T PLN02260 504 KPNFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPISSDLSNPRNFITKISRYNK-----VVNIP-NSMTVLDELLPI 574 (668)
T ss_pred CCCCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEecccCCCCccHHHHHHhccce-----eeccC-CCceehhhHHHH
Confidence 122367999999999999876432 356665555322111 22221111100 00012 123344555555
Q ss_pred HHHHhcCCCCCccccEEEeCCCcCCCCCC
Q 024125 237 VAYLCLPAASYITGQIISVDGGFTANGFN 265 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~dgG~~~~~~~ 265 (272)
++.++.. . .|..+++.++..+++++
T Consensus 575 ~~~l~~~--~--~~giyni~~~~~~s~~e 599 (668)
T PLN02260 575 SIEMAKR--N--LRGIWNFTNPGVVSHNE 599 (668)
T ss_pred HHHHHHh--C--CCceEEecCCCcCcHHH
Confidence 5666632 1 15688887776666554
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.3e-11 Score=104.41 Aligned_cols=210 Identities=15% Similarity=0.086 Sum_probs=118.7
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 99 (272)
||||||+|+||++++++|+++|++|+.++|+.+....... .. ..|... ... .+.+ ..+|+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~--~~~~~~-~~~-------~~~~-~~~D~V 61 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW--------EG--YKPWAP-LAE-------SEAL-EGADAV 61 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc--------ee--eecccc-cch-------hhhc-CCCCEE
Confidence 6899999999999999999999999999998765332110 00 112211 111 1122 469999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC--CeEEEecCCCCCC-----C------CCCChh
Q 024125 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV--GSIVFISSVGGLS-----H------VGSGSI 166 (272)
Q Consensus 100 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--g~ii~vsS~~~~~-----~------~~~~~~ 166 (272)
||+|+..... ...+.+.....+++|+.++.++++++ ++.+. .++|+.|+...+. . ..+...
T Consensus 62 vh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~ 135 (292)
T TIGR01777 62 INLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAI----AAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDF 135 (292)
T ss_pred EECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHH----HhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCCh
Confidence 9999964321 12344556678899999988777776 44443 2344444432111 0 111112
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-HHHHHH-----HHhcCCCCCCCCHHHHHHHHHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-KEFVDK-----VIARTPLQRVGEPEEVASLVAYL 240 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~e~a~~~~~l 240 (272)
|+..+...+...+ .+...++.+..+.|+.+..+-.. .... ...... .........+..++|+++.+..+
T Consensus 136 ~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~ 210 (292)
T TIGR01777 136 LAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFA 210 (292)
T ss_pred HHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc-hhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHH
Confidence 3333333333322 22345799999999988665211 0000 000000 00111223557899999999988
Q ss_pred hcCCCCCccccEEEeCCCcCCC
Q 024125 241 CLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 241 ~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+.... ..| .+++-++..++
T Consensus 211 l~~~~--~~g-~~~~~~~~~~s 229 (292)
T TIGR01777 211 LENAS--ISG-PVNATAPEPVR 229 (292)
T ss_pred hcCcc--cCC-ceEecCCCccC
Confidence 85322 223 67776665544
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.9e-11 Score=101.01 Aligned_cols=222 Identities=15% Similarity=0.070 Sum_probs=144.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCCh--HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~--G~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
..+.+||||+.|+||++.+..+... .++.+..+.-. ..+..+. +. ....+..++..|+.+...+.-++.+
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~-~~-~n~p~ykfv~~di~~~~~~~~~~~~---- 78 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLE-PV-RNSPNYKFVEGDIADADLVLYLFET---- 78 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhh-hh-ccCCCceEeeccccchHHHHhhhcc----
Confidence 3489999999999999999999875 23444433211 0122221 11 2245778889999998877666643
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC------------
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------ 159 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~------------ 159 (272)
.++|.|||-|+...... +--+--...+.|+.++..|+......- +..++|.+|+-..+.
T Consensus 79 --~~id~vihfaa~t~vd~----s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s 149 (331)
T KOG0747|consen 79 --EEIDTVIHFAAQTHVDR----SFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEAS 149 (331)
T ss_pred --CchhhhhhhHhhhhhhh----hcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccc
Confidence 57999999998643221 112234566789999999888874432 335899999854321
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcC---------CCCCCCCH
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIART---------PLQRVGEP 230 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 230 (272)
...+..+|+++|+|.+++.+++...| |+-|..+.-+.|-.|-+....--+.++....... ....+.-+
T Consensus 150 ~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~v 226 (331)
T KOG0747|consen 150 LLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYV 226 (331)
T ss_pred cCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeH
Confidence 24456789999999999999999987 6777777666665554422211123333222222 22344568
Q ss_pred HHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 231 EEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 231 ~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
+|+.+++-..+... -.|+..++..-
T Consensus 227 eD~~ea~~~v~~Kg---~~geIYNIgtd 251 (331)
T KOG0747|consen 227 EDVSEAFKAVLEKG---ELGEIYNIGTD 251 (331)
T ss_pred HHHHHHHHHHHhcC---CccceeeccCc
Confidence 99999998777542 24888887644
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.4e-11 Score=107.56 Aligned_cols=202 Identities=20% Similarity=0.239 Sum_probs=125.0
Q ss_pred CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH-------HHHHhCCCeEEEEEecCCCHHHHHH
Q 024125 15 LKGMTALVT----GGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL-------KEWQSKGFVVSGSVCDAASPDQREK 83 (272)
Q Consensus 15 l~~k~vlIt----Ga~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~ 83 (272)
...++|||| ||+|.||++++++|+++|++|++++|+.+...... .++.. ..+.++.+|++| +..
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~ 124 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKS 124 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHh
Confidence 345789999 99999999999999999999999999875432211 12222 136677888765 333
Q ss_pred HHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC
Q 024125 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163 (272)
Q Consensus 84 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~ 163 (272)
++. . ..+|+|||+++. +.+ ++ +.++..+++.+..++|++||...+.....
T Consensus 125 ~~~----~--~~~d~Vi~~~~~---------~~~-----------~~----~~ll~aa~~~gvkr~V~~SS~~vyg~~~~ 174 (378)
T PLN00016 125 KVA----G--AGFDVVYDNNGK---------DLD-----------EV----EPVADWAKSPGLKQFLFCSSAGVYKKSDE 174 (378)
T ss_pred hhc----c--CCccEEEeCCCC---------CHH-----------HH----HHHHHHHHHcCCCEEEEEccHhhcCCCCC
Confidence 331 1 369999999763 111 12 23444446666679999999765432110
Q ss_pred --------ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC---------CCC
Q 024125 164 --------GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTP---------LQR 226 (272)
Q Consensus 164 --------~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~ 226 (272)
..++. +|...+.+.+ ..++.+..+.|+.+..+....... ..+........+ ...
T Consensus 175 ~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~-~~~~~~~~~~~~i~~~g~g~~~~~ 245 (378)
T PLN00016 175 PPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCE-EWFFDRLVRGRPVPIPGSGIQLTQ 245 (378)
T ss_pred CCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchH-HHHHHHHHcCCceeecCCCCeeec
Confidence 11122 7888877653 247899999999887654211000 111222222211 113
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 227 VGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 227 ~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+..++|+++++..++... ...|+++++-++..+.
T Consensus 246 ~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~~s 279 (378)
T PLN00016 246 LGHVKDLASMFALVVGNP--KAAGQIFNIVSDRAVT 279 (378)
T ss_pred eecHHHHHHHHHHHhcCc--cccCCEEEecCCCccC
Confidence 457899999999888532 2357899998876554
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.4e-10 Score=109.40 Aligned_cols=186 Identities=13% Similarity=0.194 Sum_probs=118.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
+||||||+|+||++++++|.++|++|++++|+.... ....+.++.+|+++.. +.+++ ..+|+
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al--------~~~D~ 63 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA--------GEADA 63 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh--------cCCCE
Confidence 699999999999999999999999999999865321 1125677889999873 43333 36899
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHHH
Q 024125 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178 (272)
Q Consensus 99 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 178 (272)
|||+|+.... . ...+|+.++.++++++ ++.+ .++|++||..+.. ..|. ..+.+.
T Consensus 64 VIHLAa~~~~------~------~~~vNv~Gt~nLleAA----~~~G-vRiV~~SS~~G~~-----~~~~----~aE~ll 117 (699)
T PRK12320 64 VIHLAPVDTS------A------PGGVGITGLAHVANAA----ARAG-ARLLFVSQAAGRP-----ELYR----QAETLV 117 (699)
T ss_pred EEEcCccCcc------c------hhhHHHHHHHHHHHHH----HHcC-CeEEEEECCCCCC-----cccc----HHHHHH
Confidence 9999986311 1 1247999999888877 4444 3899999874321 1232 123322
Q ss_pred HHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHH----hcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVI----ARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 179 ~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
.. .++.+..+.|+.+..+..... ....+..+. ...+.. ...++|++++++.++... .+| .++
T Consensus 118 ----~~---~~~p~~ILR~~nVYGp~~~~~--~~r~I~~~l~~~~~~~pI~-vIyVdDvv~alv~al~~~---~~G-iyN 183 (699)
T PRK12320 118 ----ST---GWAPSLVIRIAPPVGRQLDWM--VCRTVATLLRSKVSARPIR-VLHLDDLVRFLVLALNTD---RNG-VVD 183 (699)
T ss_pred ----Hh---cCCCEEEEeCceecCCCCccc--HhHHHHHHHHHHHcCCceE-EEEHHHHHHHHHHHHhCC---CCC-EEE
Confidence 22 246677777776666532110 011111111 112221 247899999998887532 135 899
Q ss_pred eCCCcCCC
Q 024125 255 VDGGFTAN 262 (272)
Q Consensus 255 ~dgG~~~~ 262 (272)
+.||..++
T Consensus 184 IG~~~~~S 191 (699)
T PRK12320 184 LATPDTTN 191 (699)
T ss_pred EeCCCeeE
Confidence 99886654
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.1e-11 Score=110.27 Aligned_cols=161 Identities=20% Similarity=0.279 Sum_probs=118.5
Q ss_pred CCEEE----EeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 17 GMTAL----VTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 17 ~k~vl----ItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|..+| |+||++|+|.++++.+...|++|+.+.+...+. +. . ..
T Consensus 34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-------------------~~---------~-----~~ 80 (450)
T PRK08261 34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-------------------AA---------G-----WG 80 (450)
T ss_pred CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc-------------------cc---------C-----cC
Confidence 44556 888899999999999999999999876644310 00 0 00
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
.+++.+++.+... .+.+++ .+.+.+++..++.|.. .|+||+++|..... ....|+++|+
T Consensus 81 -~~~~~~~~d~~~~-------~~~~~l--------~~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~aka 139 (450)
T PRK08261 81 -DRFGALVFDATGI-------TDPADL--------KALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQR 139 (450)
T ss_pred -CcccEEEEECCCC-------CCHHHH--------HHHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHHH
Confidence 2455444433210 122322 2344667777887754 47999999977643 3457999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
++.+++|++++|+ +++++++.+.|+. ..+++++..+.|++++...+++|+.
T Consensus 140 al~gl~rsla~E~-~~gi~v~~i~~~~----------------------------~~~~~~~~~~~~l~s~~~a~~~g~~ 190 (450)
T PRK08261 140 ALEGFTRSLGKEL-RRGATAQLVYVAP----------------------------GAEAGLESTLRFFLSPRSAYVSGQV 190 (450)
T ss_pred HHHHHHHHHHHHh-hcCCEEEEEecCC----------------------------CCHHHHHHHHHHhcCCccCCccCcE
Confidence 9999999999999 7899999998874 2678899999999999999999999
Q ss_pred EEeCCCcC
Q 024125 253 ISVDGGFT 260 (272)
Q Consensus 253 i~~dgG~~ 260 (272)
+.++++..
T Consensus 191 i~~~~~~~ 198 (450)
T PRK08261 191 VRVGAADA 198 (450)
T ss_pred EEecCCcc
Confidence 99998864
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.9e-11 Score=109.40 Aligned_cols=221 Identities=13% Similarity=0.110 Sum_probs=136.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHH---HHHHHHHH---------Hh-C--------CCeEEE
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVE---LNKCLKEW---------QS-K--------GFVVSG 70 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~---~v~~~~r~~~~---~~~~~~~~---------~~-~--------~~~~~~ 70 (272)
+++|+||||||||+||++++++|++.+. +|+++.|.... .+.+.+++ .+ . ..++..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 5789999999999999999999998753 67888874321 22221121 11 1 246888
Q ss_pred EEecCCCH------HHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC
Q 024125 71 SVCDAASP------DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS 144 (272)
Q Consensus 71 ~~~D~~~~------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 144 (272)
+..|++++ +..+.+. ..+|+|||+|+..... +..+..+++|+.++.++++.+... .
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~f~-------~~~~~a~~vNV~GT~nLLelA~~~---~ 258 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIA--------KEVDVIINSAANTTFD-------ERYDVAIDINTRGPCHLMSFAKKC---K 258 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHH--------hcCCEEEECccccccc-------cCHHHHHHHHHHHHHHHHHHHHHc---C
Confidence 99999987 2333322 3599999999964311 346678999999999988876331 1
Q ss_pred CCCeEEEecCCCCCCC---------CC-----------------------------------------------------
Q 024125 145 GVGSIVFISSVGGLSH---------VG----------------------------------------------------- 162 (272)
Q Consensus 145 ~~g~ii~vsS~~~~~~---------~~----------------------------------------------------- 162 (272)
...+++++||...... ++
T Consensus 259 ~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~ 338 (605)
T PLN02503 259 KLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGL 338 (605)
T ss_pred CCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhccc
Confidence 2357888888542211 11
Q ss_pred -------CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH-------HHHHHHHhc-------
Q 024125 163 -------SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK-------EFVDKVIAR------- 221 (272)
Q Consensus 163 -------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~-------~~~~~~~~~------- 221 (272)
....|.-+|+..|.+++..+ .++.+..+.|+.|.+.....+.... .........
T Consensus 339 ~~~~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~ 413 (605)
T PLN02503 339 ERAKLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLA 413 (605)
T ss_pred chhhhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEe
Confidence 11568888888888876432 2688999999888553322221110 001001000
Q ss_pred --CCCCCCCCHHHHHHHHHHHhcC--CCCCccccEEEeCCC
Q 024125 222 --TPLQRVGEPEEVASLVAYLCLP--AASYITGQIISVDGG 258 (272)
Q Consensus 222 --~~~~~~~~~~e~a~~~~~l~~~--~~~~~~G~~i~~dgG 258 (272)
.-.-....+|.++++++..+.. ......++++++.++
T Consensus 414 ~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~ 454 (605)
T PLN02503 414 DPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS 454 (605)
T ss_pred CCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence 0111234678899988777431 111235889998776
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.4e-10 Score=87.53 Aligned_cols=167 Identities=19% Similarity=0.139 Sum_probs=115.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++++||||+ |+|.++++.|+++|++|++++|+.++.+.+...+.. ..++..+.+|++|.++++++++.+.+.+ +++|
T Consensus 1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id 77 (177)
T PRK08309 1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFD 77 (177)
T ss_pred CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCe
Confidence 469999998 677779999999999999999998887776655543 3467788999999999999999998888 6899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC----eEEEe-cCCCCCCCCCCChhhHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG----SIVFI-SSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g----~ii~v-sS~~~~~~~~~~~~Y~~sK~ 172 (272)
++|+.+-.. ++-++..++ ++.+.. +++.| +|.+.. +
T Consensus 78 ~lv~~vh~~----------------------~~~~~~~~~----~~~gv~~~~~~~~h~~gs~~~~-~------------ 118 (177)
T PRK08309 78 LAVAWIHSS----------------------AKDALSVVC----RELDGSSETYRLFHVLGSAASD-P------------ 118 (177)
T ss_pred EEEEecccc----------------------chhhHHHHH----HHHccCCCCceEEEEeCCcCCc-h------------
Confidence 999877642 122222233 333323 78877 333311 1
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc-CCCCCcccc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL-PAASYITGQ 251 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~-~~~~~~~G~ 251 (272)
+..+..+...+....-|..|++.++-.. +++|=+|+++.++.... +...++.|+
T Consensus 119 ------~~~~~~~~~~~~~~~~i~lgf~~~~~~~-------------------rwlt~~ei~~gv~~~~~~~~~~~~~g~ 173 (177)
T PRK08309 119 ------RIPSEKIGPARCSYRRVILGFVLEDTYS-------------------RWLTHEEISDGVIKAIESDADEHVVGT 173 (177)
T ss_pred ------hhhhhhhhhcCCceEEEEEeEEEeCCcc-------------------ccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence 1223344445667778889998664433 35577888888877765 444455554
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.5e-10 Score=99.35 Aligned_cols=195 Identities=11% Similarity=0.010 Sum_probs=119.9
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC-cc
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK-LN 97 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~-id 97 (272)
++|||||||.+|++++++|+++|++|.++.|+.++... ..+....+|+.|.+++..+++.. +.. .. +|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~d~~d~~~l~~a~~~~-~~~-~g~~d 69 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------PNEKHVKFDWLDEDTWDNPFSSD-DGM-EPEIS 69 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------CCCccccccCCCHHHHHHHHhcc-cCc-CCcee
Confidence 48999999999999999999999999999998765321 13445678999999998888543 222 24 89
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
.++++++... + ..+ ..+.+++.+++.+..+||++||.....+. ..+...+.+
T Consensus 70 ~v~~~~~~~~-------~--~~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~~ 121 (285)
T TIGR03649 70 AVYLVAPPIP-------D--LAP------------PMIKFIDFARSKGVRRFVLLSASIIEKGG-------PAMGQVHAH 121 (285)
T ss_pred EEEEeCCCCC-------C--hhH------------HHHHHHHHHHHcCCCEEEEeeccccCCCC-------chHHHHHHH
Confidence 9999886421 1 111 11234445566777899999986543221 122222222
Q ss_pred HHHHHHHHcc-CCeeEEEeeCCcccChhhHhhhhCHHHHH--HH--HhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 178 TRNLACEWAK-DNIRTNSVAPWYTKTSLVERLLENKEFVD--KV--IARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 178 ~~~la~el~~-~~i~v~~v~PG~v~t~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
. .. .++....+.|+++..++....... .... .+ ........+.+++|+++.+..++.... ..|+.
T Consensus 122 l-------~~~~gi~~tilRp~~f~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~ 191 (285)
T TIGR03649 122 L-------DSLGGVEYTVLRPTWFMENFSEEFHVE-AIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKV--APNTD 191 (285)
T ss_pred H-------HhccCCCEEEEeccHHhhhhccccccc-ccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCC--cCCCe
Confidence 2 22 389999999997765442111000 0000 00 001112246789999999998886432 23566
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
+++-|+..+.
T Consensus 192 ~~l~g~~~~s 201 (285)
T TIGR03649 192 YVVLGPELLT 201 (285)
T ss_pred EEeeCCccCC
Confidence 6666654443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.1e-11 Score=98.16 Aligned_cols=102 Identities=12% Similarity=0.121 Sum_probs=78.1
Q ss_pred CEEEEeCC-CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGG-TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa-~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.+=.||.. +||||+++|+.|+++|++|+++++... +.... ...+|+++.++++++++.+.+.+ +++
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~~----~~~~Dv~d~~s~~~l~~~v~~~~-g~i 81 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPEP----HPNLSIREIETTKDLLITLKELV-QEH 81 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccccc----CCcceeecHHHHHHHHHHHHHHc-CCC
Confidence 44455554 689999999999999999999876311 11000 13579999999999999999988 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 135 (272)
|++|||||+....++.+.+.++|++++.. +.+.+.+
T Consensus 82 DiLVnnAgv~d~~~~~~~s~e~~~~~~~~---~~~~~~~ 117 (227)
T TIGR02114 82 DILIHSMAVSDYTPVYMTDLEQVQASDNL---NEFLSKQ 117 (227)
T ss_pred CEEEECCEeccccchhhCCHHHHhhhcch---hhhhccc
Confidence 99999999887788888999999987554 4444444
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.9e-10 Score=93.35 Aligned_cols=204 Identities=17% Similarity=0.152 Sum_probs=130.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+.+++++++||||+|+||+|+++.|..+|..|+.++......+.....+.. ..++..+.-|+..+ ++
T Consensus 23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~------- 89 (350)
T KOG1429|consen 23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LL------- 89 (350)
T ss_pred cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HH-------
Confidence 457789999999999999999999999999999998755444433333321 12444445555322 33
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC--------------
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-------------- 158 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-------------- 158 (272)
..+|.|+|.|+...+..+...+ -+++..|+.++++.+..+ ++.+ .|++..|+...+
T Consensus 90 -~evD~IyhLAapasp~~y~~np----vktIktN~igtln~lgla----krv~-aR~l~aSTseVYgdp~~hpq~e~ywg 159 (350)
T KOG1429|consen 90 -KEVDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLA----KRVG-ARFLLASTSEVYGDPLVHPQVETYWG 159 (350)
T ss_pred -HHhhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHH----HHhC-ceEEEeecccccCCcccCCCcccccc
Confidence 2478999999876555444333 357778999999988876 2323 688888775432
Q ss_pred --CCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--CHHHHHHHHhcCCC---------C
Q 024125 159 --SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--NKEFVDKVIARTPL---------Q 225 (272)
Q Consensus 159 --~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~ 225 (272)
++....+.|...|.+.+.++..+.++. ||.+....+-.+..|...-... -..+..+..+..|+ +
T Consensus 160 ~vnpigpr~cydegKr~aE~L~~~y~k~~---giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtR 236 (350)
T KOG1429|consen 160 NVNPIGPRSCYDEGKRVAETLCYAYHKQE---GIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTR 236 (350)
T ss_pred ccCcCCchhhhhHHHHHHHHHHHHhhccc---CcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceE
Confidence 234456889999999999998887764 6665555443332222210000 01233333333333 3
Q ss_pred CCCCHHHHHHHHHHHhc
Q 024125 226 RVGEPEEVASLVAYLCL 242 (272)
Q Consensus 226 ~~~~~~e~a~~~~~l~~ 242 (272)
.+.-+.|+.+.++.|..
T Consensus 237 SF~yvsD~Vegll~Lm~ 253 (350)
T KOG1429|consen 237 SFQYVSDLVEGLLRLME 253 (350)
T ss_pred EEEeHHHHHHHHHHHhc
Confidence 34457788888887773
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.9e-09 Score=89.27 Aligned_cols=197 Identities=16% Similarity=0.156 Sum_probs=110.7
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 99 (272)
|+||||||.||++++..|.+.|.+|+++.|+..+..+.... .+ ...+.+.... ..++|+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~------~v-------~~~~~~~~~~-------~~~~Dav 60 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP------NV-------TLWEGLADAL-------TLGIDAV 60 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc------cc-------cccchhhhcc-------cCCCCEE
Confidence 58999999999999999999999999999988765433211 11 1111111111 1269999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CeEEEecCCCCCCCCCCChhhHHHHH----HH
Q 024125 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKA----AM 174 (272)
Q Consensus 100 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~ii~vsS~~~~~~~~~~~~Y~~sK~----a~ 174 (272)
||.||..-... .++.+.=+..+ .+-+..++.+++...+... .++..-+|..++.+......|.-... .+
T Consensus 61 INLAG~~I~~r--rWt~~~K~~i~----~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl 134 (297)
T COG1090 61 INLAGEPIAER--RWTEKQKEEIR----QSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL 134 (297)
T ss_pred EECCCCccccc--cCCHHHHHHHH----HHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence 99999633222 14443333333 3455556666666664332 44555556666655444433333332 33
Q ss_pred HHHHHHHHHH---HccCCeeEEEeeCCcccChh---hHhhhhCHHH-H-HHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 175 NQLTRNLACE---WAKDNIRTNSVAPWYTKTSL---VERLLENKEF-V-DKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 175 ~~~~~~la~e---l~~~~i~v~~v~PG~v~t~~---~~~~~~~~~~-~-~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
..+++.+-.+ ....|+||+.+.-|.|..+- +..+...-.+ + .++......-.+...||+++.+.|++.
T Consensus 135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~ 210 (297)
T COG1090 135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLE 210 (297)
T ss_pred HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHh
Confidence 3344333222 23348999999999886632 2222111000 0 000011111123468999999999995
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.8e-09 Score=88.77 Aligned_cols=198 Identities=21% Similarity=0.206 Sum_probs=118.5
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 99 (272)
|+|+||+|.+|+++++.|++.++.|.++.|+... ...++++..+.. .+.+|..|.+++.+++ ..+|.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g~~--vv~~d~~~~~~l~~al--------~g~d~v 68 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALGAE--VVEADYDDPESLVAAL--------KGVDAV 68 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTTTE--EEES-TT-HHHHHHHH--------TTCSEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcccce--EeecccCCHHHHHHHH--------cCCceE
Confidence 7999999999999999999999999999998732 233445555544 4599999999988888 479999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-C---CCChhhHHHHHHHH
Q 024125 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-V---GSGSIYGATKAAMN 175 (272)
Q Consensus 100 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-~---~~~~~Y~~sK~a~~ 175 (272)
+++.+... ..+. ....++++++ ++.+..++|. ||...... . .+...+-..|..++
T Consensus 69 ~~~~~~~~--------~~~~--------~~~~~li~Aa----~~agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie 127 (233)
T PF05368_consen 69 FSVTPPSH--------PSEL--------EQQKNLIDAA----KAAGVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIE 127 (233)
T ss_dssp EEESSCSC--------CCHH--------HHHHHHHHHH----HHHT-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred EeecCcch--------hhhh--------hhhhhHHHhh----hccccceEEE-EEecccccccccccccchhhhhhhhhh
Confidence 98887532 1111 1122334444 4445667775 55443331 1 11222334676666
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHH---HHhcCCC---CCC-CCHHHHHHHHHHHhcCCCCCc
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDK---VIARTPL---QRV-GEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~---~~~~~~~---~~~-~~~~e~a~~~~~l~~~~~~~~ 248 (272)
.+.+. .++....+.||+........+......... +.-..+. ..+ .+++|+++.+..++.....+-
T Consensus 128 ~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~ 200 (233)
T PF05368_consen 128 EYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHN 200 (233)
T ss_dssp HHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTT
T ss_pred hhhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhc
Confidence 55433 389999999997655443322110000000 0000111 123 378999999999998755544
Q ss_pred cccEEEeCC
Q 024125 249 TGQIISVDG 257 (272)
Q Consensus 249 ~G~~i~~dg 257 (272)
.|+.+.+-|
T Consensus 201 ~~~~~~~~~ 209 (233)
T PF05368_consen 201 NGKTIFLAG 209 (233)
T ss_dssp EEEEEEEGG
T ss_pred CCEEEEeCC
Confidence 788887754
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.7e-08 Score=84.67 Aligned_cols=85 Identities=19% Similarity=0.159 Sum_probs=67.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCCh---HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++++|+++|+|+ ||+|++++..|++.|+. |++++|+. ++.+++.+++......+....+|+++.+++++.+
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~---- 197 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI---- 197 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh----
Confidence 478899999999 69999999999999995 99999986 6777777777655445556678888777665544
Q ss_pred HHcCCCccEEEECCCCCC
Q 024125 90 SKFNGKLNILVNNVGTNI 107 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~ 107 (272)
...|+||||-.+..
T Consensus 198 ----~~~DilINaTp~Gm 211 (289)
T PRK12548 198 ----ASSDILVNATLVGM 211 (289)
T ss_pred ----ccCCEEEEeCCCCC
Confidence 35799999987643
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.2e-07 Score=78.82 Aligned_cols=214 Identities=22% Similarity=0.207 Sum_probs=138.1
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.+.+++|-++-|.||||++|+-++.+|++.|-.|++-.|-.+....-.+-.-+ .+.+.++..|+.|+++++++++
T Consensus 55 GRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd-LGQvl~~~fd~~DedSIr~vvk---- 129 (391)
T KOG2865|consen 55 GRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD-LGQVLFMKFDLRDEDSIRAVVK---- 129 (391)
T ss_pred CcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc-ccceeeeccCCCCHHHHHHHHH----
Confidence 34567889999999999999999999999999999998866553333222222 3467888999999999999994
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.-+++||..|.-.+..- .+ ..++|+.++-.+.+.+ +..+.-++|.+|+..+. ....+-|=-+
T Consensus 130 ----~sNVVINLIGrd~eTkn--f~------f~Dvn~~~aerlAric----ke~GVerfIhvS~Lgan--v~s~Sr~Lrs 191 (391)
T KOG2865|consen 130 ----HSNVVINLIGRDYETKN--FS------FEDVNVHIAERLARIC----KEAGVERFIHVSCLGAN--VKSPSRMLRS 191 (391)
T ss_pred ----hCcEEEEeeccccccCC--cc------cccccchHHHHHHHHH----HhhChhheeehhhcccc--ccChHHHHHh
Confidence 57999999996433321 12 2256777776666655 66677899999987743 4455667788
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC--------CCCCCHHHHHHHHHHHhc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL--------QRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~e~a~~~~~l~~ 242 (272)
|++-+.-++. ++. ....+.|.-+..+.-+-+........++ .-.|+ +...-+-|+|+.+...+.
T Consensus 192 K~~gE~aVrd---afP----eAtIirPa~iyG~eDrfln~ya~~~rk~-~~~pL~~~GekT~K~PVyV~DVaa~IvnAvk 263 (391)
T KOG2865|consen 192 KAAGEEAVRD---AFP----EATIIRPADIYGTEDRFLNYYASFWRKF-GFLPLIGKGEKTVKQPVYVVDVAAAIVNAVK 263 (391)
T ss_pred hhhhHHHHHh---hCC----cceeechhhhcccchhHHHHHHHHHHhc-CceeeecCCcceeeccEEEehHHHHHHHhcc
Confidence 8887765533 332 2456778655433211111111111111 11222 222345689999988885
Q ss_pred CCCCCccccEEEeCC
Q 024125 243 PAASYITGQIISVDG 257 (272)
Q Consensus 243 ~~~~~~~G~~i~~dg 257 (272)
+. .-.|.++-.-|
T Consensus 264 Dp--~s~Gktye~vG 276 (391)
T KOG2865|consen 264 DP--DSMGKTYEFVG 276 (391)
T ss_pred Cc--cccCceeeecC
Confidence 44 33477765443
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.2e-08 Score=95.17 Aligned_cols=171 Identities=17% Similarity=0.261 Sum_probs=140.5
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHH---HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVE---LNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 85 (272)
+..+.-..|..+|+||-||.|.+++..|.++|+ .+++++|+--+ .......+++.+..|.+...|++..+..+.++
T Consensus 1761 ~rt~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li 1840 (2376)
T KOG1202|consen 1761 PRTYCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLI 1840 (2376)
T ss_pred chhhcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHH
Confidence 334444679999999999999999999999999 58888886333 34556777888999999999999999999999
Q ss_pred HHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh
Q 024125 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~ 165 (272)
++..+ . +++-.|+|.|.+.....+++.+++.|++.-+..+.++.++=+.-.+.... -..+|..||.+.-++..+..
T Consensus 1841 ~~s~k-l-~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQt 1916 (2376)
T KOG1202|consen 1841 EESNK-L-GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQT 1916 (2376)
T ss_pred HHhhh-c-ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCccc
Confidence 77654 4 68999999999888888999999999999999999999877665443322 25788899999989999999
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 024125 166 IYGATKAAMNQLTRNLACE 184 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~e 184 (272)
.|+-+.++++.+++.=+.+
T Consensus 1917 NYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1917 NYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred ccchhhHHHHHHHHHhhhc
Confidence 9999999999999764433
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.2e-06 Score=74.38 Aligned_cols=196 Identities=20% Similarity=0.107 Sum_probs=121.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+.+|||||||.+|++++++|.++|++|....|+.+...... ..+.+...|+.++.++...+ ...|
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~--------~G~~ 65 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGA--------KGVD 65 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHh--------cccc
Confidence 46899999999999999999999999999999998877655 36777889999999987777 4688
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
.++++.+... +.. ..............+.. . .+..+++.+|+..... .....|..+|...+..
T Consensus 66 ~~~~i~~~~~-~~~---------~~~~~~~~~~~~~a~~a----~-~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~ 128 (275)
T COG0702 66 GVLLISGLLD-GSD---------AFRAVQVTAVVRAAEAA----G-AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA 128 (275)
T ss_pred EEEEEecccc-ccc---------chhHHHHHHHHHHHHHh----c-CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence 8888887643 211 11122233333333333 1 2335677777766544 3446799999998886
Q ss_pred HHHHHHHHccCCeeEEEee-CCcccChhhHhhhhCHHHHHHH---HhcCCC-CCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 178 TRNLACEWAKDNIRTNSVA-PWYTKTSLVERLLENKEFVDKV---IARTPL-QRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~-PG~v~t~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
.++. ++--..+. |+++......... ...... ...... -.....+|++......+.... ..|+.
T Consensus 129 l~~s-------g~~~t~lr~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~~~~ 196 (275)
T COG0702 129 LRSS-------GIPYTTLRRAAFYLGAGAAFIE---AAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TAGRT 196 (275)
T ss_pred HHhc-------CCCeEEEecCeeeeccchhHHH---HHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--ccCcE
Confidence 6543 55544445 4443332211000 000000 000111 234577888888877775433 34555
Q ss_pred EEeCC
Q 024125 253 ISVDG 257 (272)
Q Consensus 253 i~~dg 257 (272)
+.+-|
T Consensus 197 ~~l~g 201 (275)
T COG0702 197 YELAG 201 (275)
T ss_pred EEccC
Confidence 55544
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.5e-08 Score=86.39 Aligned_cols=83 Identities=20% Similarity=0.203 Sum_probs=63.1
Q ss_pred CCCCCCEEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCC
Q 024125 13 WSLKGMTALVTGG----------------TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76 (272)
Q Consensus 13 ~~l~~k~vlItGa----------------~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~ 76 (272)
.+++||++||||| +|++|.++|++|+++|++|++++++.+ .. .. . ....+|++
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~~-~--~~~~~dv~ 252 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------TP-A--GVKRIDVE 252 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------CC-C--CcEEEccC
Confidence 3589999999999 555999999999999999999988652 11 01 1 12467999
Q ss_pred CHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCC
Q 024125 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKP 110 (272)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~ 110 (272)
+.+++.+.++ +.+ +++|++|||||+....+
T Consensus 253 ~~~~~~~~v~---~~~-~~~DilI~~Aav~d~~~ 282 (399)
T PRK05579 253 SAQEMLDAVL---AAL-PQADIFIMAAAVADYRP 282 (399)
T ss_pred CHHHHHHHHH---Hhc-CCCCEEEEccccccccc
Confidence 8888766665 445 68999999999854444
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.6e-07 Score=76.06 Aligned_cols=84 Identities=24% Similarity=0.232 Sum_probs=67.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++++++|+|++|++|+++++.|+++|++|++++|+.++.+++.+.+.... ......+|..+.+++.+.+
T Consensus 24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~------- 95 (194)
T cd01078 24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAI------- 95 (194)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHH-------
Confidence 46889999999999999999999999999999999999998888877765321 2234467888888776666
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
...|+||++...
T Consensus 96 -~~~diVi~at~~ 107 (194)
T cd01078 96 -KGADVVFAAGAA 107 (194)
T ss_pred -hcCCEEEECCCC
Confidence 357999987764
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.2e-06 Score=78.27 Aligned_cols=245 Identities=16% Similarity=0.142 Sum_probs=150.8
Q ss_pred CCCCCCCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHH----hCCCeEEEEEecCCCHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGT-RGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQ----SKGFVVSGSVCDAASPDQREK 83 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~-~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~ 83 (272)
++.-...++++||||++ +.||.+++..|+..|++|+++..+ .+...+..+.+- ..+..+.++..+..+..+++.
T Consensus 389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA 468 (866)
T COG4982 389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA 468 (866)
T ss_pred CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence 45566789999999998 569999999999999999887643 344444444443 235678889999999999999
Q ss_pred HHHHHHHHcC-------------CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC---C
Q 024125 84 LIQEVGSKFN-------------GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV---G 147 (272)
Q Consensus 84 ~~~~~~~~~~-------------~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~---g 147 (272)
+++.+.+... -.++.+|--|.....+.+.+.... -+-.+++-++...+++-.+.+.-..++. -
T Consensus 469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~ 547 (866)
T COG4982 469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRL 547 (866)
T ss_pred HHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccce
Confidence 9999876421 135777777776555566555532 3445566666666666665443322221 2
Q ss_pred eEEEecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHc-cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCC
Q 024125 148 SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA-KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQR 226 (272)
Q Consensus 148 ~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 226 (272)
++|.=+|.- ...+.+...|+-+|++++.+.-.+..|-. ...+.+..-.-||+...-+.. ..+.+..-.++. .-+
T Consensus 548 hVVLPgSPN-rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg---~Ndiiv~aiEk~-GV~ 622 (866)
T COG4982 548 HVVLPGSPN-RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMG---HNDIIVAAIEKA-GVR 622 (866)
T ss_pred EEEecCCCC-CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccC---CcchhHHHHHHh-Cce
Confidence 455555543 12345678999999999998876666531 011333333456765433211 112121111111 223
Q ss_pred CCCHHHHHHHHHHHhcCCCC-Ccccc--EEEeCCCcC
Q 024125 227 VGEPEEVASLVAYLCLPAAS-YITGQ--IISVDGGFT 260 (272)
Q Consensus 227 ~~~~~e~a~~~~~l~~~~~~-~~~G~--~i~~dgG~~ 260 (272)
.-+++|++..++-|++.+.. ..... ..+++||..
T Consensus 623 tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~ 659 (866)
T COG4982 623 TYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLG 659 (866)
T ss_pred ecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccc
Confidence 45889999999988875422 11223 445667753
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.5e-07 Score=73.71 Aligned_cols=200 Identities=18% Similarity=0.121 Sum_probs=118.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+++||||++|-+|++|.+.+.++|. +.++.+.. .+|+++.++.+++++. .
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~------e 54 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFES------E 54 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhc------c
Confidence 7899999999999999999998875 34444321 3799999999999976 3
Q ss_pred CccEEEECCCCCCCCCCC--CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-------------
Q 024125 95 KLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------- 159 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~------------- 159 (272)
++-.+||.|+... +.+. ..+.+-|...+++| -+.++.+ -+.+..++++..|..-+-
T Consensus 55 kPthVIhlAAmVG-Glf~N~~ynldF~r~Nl~in----dNVlhsa----~e~gv~K~vsclStCIfPdkt~yPIdEtmvh 125 (315)
T KOG1431|consen 55 KPTHVIHLAAMVG-GLFHNNTYNLDFIRKNLQIN----DNVLHSA----HEHGVKKVVSCLSTCIFPDKTSYPIDETMVH 125 (315)
T ss_pred CCceeeehHhhhc-chhhcCCCchHHHhhcceec----hhHHHHH----HHhchhhhhhhcceeecCCCCCCCCCHHHhc
Confidence 6778888886311 1111 22444444444333 3333433 234444566655533211
Q ss_pred ---CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHH--------------
Q 024125 160 ---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKV-------------- 218 (272)
Q Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~-------------- 218 (272)
+.+....|+-+|..+.-..+.++.+++- ...++.|-.+-.+--.--.++ |..+.++
T Consensus 126 ~gpphpsN~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~Vw 202 (315)
T KOG1431|consen 126 NGPPHPSNFGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVW 202 (315)
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEe
Confidence 1234467999998888888999998744 344444432222110000000 1111111
Q ss_pred HhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 219 IARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 219 ~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
....|++.+.-.+|.|+++++++. .|-.=+.|.+..|.
T Consensus 203 GsG~PlRqFiys~DLA~l~i~vlr---~Y~~vEpiils~ge 240 (315)
T KOG1431|consen 203 GSGSPLRQFIYSDDLADLFIWVLR---EYEGVEPIILSVGE 240 (315)
T ss_pred cCCChHHHHhhHhHHHHHHHHHHH---hhcCccceEeccCc
Confidence 123567777788999999999984 33334556555553
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.3e-07 Score=82.25 Aligned_cols=169 Identities=22% Similarity=0.206 Sum_probs=110.9
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCCh------HHHHHH-----HHHHHhC----CCeEEEEEecCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNE------VELNKC-----LKEWQSK----GFVVSGSVCDAA 76 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~---~v~~~~r~~------~~~~~~-----~~~~~~~----~~~~~~~~~D~~ 76 (272)
++||+++||||||++|+-++..|++.-- ++++.-|.. +++... -+.+.+. ..++..+..|++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 6899999999999999999999998642 677776632 222211 1122221 346777888887
Q ss_pred CHH------HHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEE
Q 024125 77 SPD------QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIV 150 (272)
Q Consensus 77 ~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii 150 (272)
+++ +.+.+. ..+|+|||+|+... -.|-.+....+|..|+.++++.+....+- ..++
T Consensus 90 ~~~LGis~~D~~~l~--------~eV~ivih~AAtvr-------Fde~l~~al~iNt~Gt~~~l~lak~~~~l---~~~v 151 (467)
T KOG1221|consen 90 EPDLGISESDLRTLA--------DEVNIVIHSAATVR-------FDEPLDVALGINTRGTRNVLQLAKEMVKL---KALV 151 (467)
T ss_pred CcccCCChHHHHHHH--------hcCCEEEEeeeeec-------cchhhhhhhhhhhHhHHHHHHHHHHhhhh---heEE
Confidence 653 222111 47999999999632 23556788899999999998877554322 3677
Q ss_pred EecCCCCCCC----------------------------------------CCCChhhHHHHHHHHHHHHHHHHHHccCCe
Q 024125 151 FISSVGGLSH----------------------------------------VGSGSIYGATKAAMNQLTRNLACEWAKDNI 190 (272)
Q Consensus 151 ~vsS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i 190 (272)
.+|....... ......|.-+|+..+++....+. +.
T Consensus 152 hVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~-----~l 226 (467)
T KOG1221|consen 152 HVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE-----NL 226 (467)
T ss_pred EeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc-----CC
Confidence 7776543210 11235688888888887765544 45
Q ss_pred eEEEeeCCcccChhhH
Q 024125 191 RTNSVAPWYTKTSLVE 206 (272)
Q Consensus 191 ~v~~v~PG~v~t~~~~ 206 (272)
-+..++|..+......
T Consensus 227 PivIiRPsiI~st~~E 242 (467)
T KOG1221|consen 227 PLVIIRPSIITSTYKE 242 (467)
T ss_pred CeEEEcCCceeccccC
Confidence 5777888776554443
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.57 E-value=4e-07 Score=75.56 Aligned_cols=100 Identities=15% Similarity=0.113 Sum_probs=66.1
Q ss_pred CEEEEeCCCCh-HHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRG-IGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~g-iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.+-.||..++| ||+++|++|+++|++|++++|..... ......+.++.++ +. +++.+.+.+.+ +.+
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-------~~~~~~v~~i~v~--s~---~~m~~~l~~~~-~~~ 82 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-------PEPHPNLSIIEIE--NV---DDLLETLEPLV-KDH 82 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-------CCCCCCeEEEEEe--cH---HHHHHHHHHHh-cCC
Confidence 46677766665 99999999999999999988754210 0011234444432 22 22333333334 579
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~ 130 (272)
|++|||||+....+....+.+++.+++++|....
T Consensus 83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred CEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence 9999999987666666677888999888875543
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.5e-06 Score=76.99 Aligned_cols=176 Identities=19% Similarity=0.198 Sum_probs=106.8
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHH-HHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR-EKLIQEV 88 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~~ 88 (272)
++....+..+|||+||+|++|+-+++.|.++|..|..+.|+.++.+.+.. +.........+..|.....++ ..++..+
T Consensus 72 ~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~ 150 (411)
T KOG1203|consen 72 PNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVEAV 150 (411)
T ss_pred CCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhhhc
Confidence 34445567899999999999999999999999999999999988777765 111111222333444433332 2222211
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+--..+++.|+|..+... +......+.+.|..++++++ +..+..+++.+||+.+.........+.
T Consensus 151 ----~~~~~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~ 215 (411)
T KOG1203|consen 151 ----PKGVVIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILL 215 (411)
T ss_pred ----cccceeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhh
Confidence 112456666666422211 22233456677777777776 556777999999988765544444444
Q ss_pred HHHHHHHHHH-HHHHHHHccCCeeEEEeeCCcccCh
Q 024125 169 ATKAAMNQLT-RNLACEWAKDNIRTNSVAPWYTKTS 203 (272)
Q Consensus 169 ~sK~a~~~~~-~~la~el~~~~i~v~~v~PG~v~t~ 203 (272)
. .....-. +...+.+...|+....|.||....+
T Consensus 216 ~--~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~ 249 (411)
T KOG1203|consen 216 L--NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQD 249 (411)
T ss_pred h--hhhhhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence 1 1111111 2333455677999999999876553
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.2e-07 Score=81.69 Aligned_cols=110 Identities=17% Similarity=0.207 Sum_probs=74.7
Q ss_pred CCCCCEEEEeCC---------------CCh-HHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC
Q 024125 14 SLKGMTALVTGG---------------TRG-IGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77 (272)
Q Consensus 14 ~l~~k~vlItGa---------------~~g-iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 77 (272)
+++||++||||| ||| +|.++++.|.++|++|+++.+..... .... ...+|+++
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~~--~~~~~v~~ 250 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPPG--VKSIKVST 250 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCCC--cEEEEecc
Confidence 588999999999 666 99999999999999999887654321 1111 24578988
Q ss_pred HHHH-HHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCC--HHHHHHHHHHHhHHHHHHHHHHH
Q 024125 78 PDQR-EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYS--AEEYSKIMTTNFESTYHLCQLVY 138 (272)
Q Consensus 78 ~~~~-~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~~~ 138 (272)
.+++ ++++++. + +++|++|+|||+....+....+ .......+.+|+..+-.+++.+.
T Consensus 251 ~~~~~~~~~~~~---~-~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 251 AEEMLEAALNEL---A-KDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred HHHHHHHHHHhh---c-ccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence 8888 5555443 3 5799999999986555443211 01112234567777766666664
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.6e-07 Score=74.49 Aligned_cols=85 Identities=19% Similarity=0.161 Sum_probs=52.6
Q ss_pred CCCCEEEEeCCC----------------ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCH
Q 024125 15 LKGMTALVTGGT----------------RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78 (272)
Q Consensus 15 l~~k~vlItGa~----------------~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 78 (272)
++||+||||+|. |.+|+++|++|+++|++|+++++....... ... ....+..+..|....
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s~~d~~ 76 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEGIIDLQ 76 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEecHHHHH
Confidence 479999999886 999999999999999999988753221110 000 012233333322212
Q ss_pred HHHHHHHHHHHHHcCCCccEEEECCCCCCCC
Q 024125 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRK 109 (272)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 109 (272)
+ .+.++.+. .++|++||+|++....
T Consensus 77 ~----~l~~~~~~--~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 77 D----KMKSIITH--EKVDAVIMAAAGSDWV 101 (229)
T ss_pred H----HHHHHhcc--cCCCEEEECcccccee
Confidence 2 23333221 2589999999985443
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.7e-06 Score=63.91 Aligned_cols=79 Identities=23% Similarity=0.379 Sum_probs=59.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++++++|.|+ ||.|++++.+|++.|+. |+++.|+.++.+++.+++. +..+.....+ +.. +.+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~~~--~~~---~~~------- 73 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIPLE--DLE---EAL------- 73 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEEGG--GHC---HHH-------
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceeeHH--HHH---HHH-------
Confidence 689999999998 89999999999999985 9999999999999998882 2234443332 222 222
Q ss_pred CCCccEEEECCCCCCC
Q 024125 93 NGKLNILVNNVGTNIR 108 (272)
Q Consensus 93 ~~~id~li~~ag~~~~ 108 (272)
...|+||++.+....
T Consensus 74 -~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 74 -QEADIVINATPSGMP 88 (135)
T ss_dssp -HTESEEEE-SSTTST
T ss_pred -hhCCeEEEecCCCCc
Confidence 468999999986433
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=6.8e-07 Score=72.98 Aligned_cols=215 Identities=16% Similarity=0.078 Sum_probs=130.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-----HHHHHHHHHH-hCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-----ELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.|++||||-+|-=|+-++.-|+.+|++|-.+-|+.. +.+-+...-. ..+.....+..|++|...+.++++.+
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-- 105 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-- 105 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence 358999999999999999999999999987666433 3333332222 23567888899999999999998876
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCC--CC---------CC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV--GG---------LS 159 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~--~~---------~~ 159 (272)
+++-|+|.|+..+..- +-+-.+.+-++...|++.++.++...-...+ -++--.|+. .+ ..
T Consensus 106 ----kPtEiYnLaAQSHVkv----SFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-VrfYQAstSElyGkv~e~PQsE~T 176 (376)
T KOG1372|consen 106 ----KPTEVYNLAAQSHVKV----SFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-VRFYQASTSELYGKVQEIPQSETT 176 (376)
T ss_pred ----CchhhhhhhhhcceEE----EeecccceeeccchhhhhHHHHHHhcCcccc-eeEEecccHhhcccccCCCcccCC
Confidence 5788889888654332 2223356667889999988887733211111 222222221 11 23
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHcc---CCeeEEEeeCC----cccChhhHhhhhCH-HHHH--HHHhcCCCCCCCC
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAK---DNIRTNSVAPW----YTKTSLVERLLENK-EFVD--KVIARTPLQRVGE 229 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~---~~i~v~~v~PG----~v~t~~~~~~~~~~-~~~~--~~~~~~~~~~~~~ 229 (272)
++.+.++|+++|..-.=++-.++..|.- .||-+|.=+|- +|--.+.+...... ...+ .+.+......++-
T Consensus 177 PFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGh 256 (376)
T KOG1372|consen 177 PFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGH 256 (376)
T ss_pred CCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccch
Confidence 4566789999998765555555555533 36777777774 22222222211000 0000 0011223345566
Q ss_pred HHHHHHHHHHHhc
Q 024125 230 PEEVASLVAYLCL 242 (272)
Q Consensus 230 ~~e~a~~~~~l~~ 242 (272)
..|-..+++.+++
T Consensus 257 A~dYVEAMW~mLQ 269 (376)
T KOG1372|consen 257 AGDYVEAMWLMLQ 269 (376)
T ss_pred hHHHHHHHHHHHh
Confidence 7777777777765
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.1e-05 Score=60.07 Aligned_cols=185 Identities=15% Similarity=0.078 Sum_probs=116.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+++-|.||+|-.|+.|++...++|..|..+.|+..++.+. ..+...+.|+-|++++.+.+ ...|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l--------~g~D 64 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDL--------AGHD 64 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhh--------cCCc
Confidence 4678999999999999999999999999999999886654 24556788999998875555 4689
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC----------CCCCChhh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----------HVGSGSIY 167 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~----------~~~~~~~Y 167 (272)
+||..-+...... .+...+ -.+.++..++..+..|++.++...+.. +..+...|
T Consensus 65 aVIsA~~~~~~~~-----~~~~~k-----------~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~ 128 (211)
T COG2910 65 AVISAFGAGASDN-----DELHSK-----------SIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK 128 (211)
T ss_pred eEEEeccCCCCCh-----hHHHHH-----------HHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence 9998887643221 111111 135566666666778999998876543 22223445
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccC--hhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT--SLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
..+++.-+ +.+.|+.+ ..+....++|...-. +.+.++.-.++. +..+.......+-+|-|-+++.-+
T Consensus 129 ~~A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~---ll~n~~G~SrIS~aDYAiA~lDe~ 197 (211)
T COG2910 129 PEALAQAE-FLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQ---LLVNAKGESRISYADYAIAVLDEL 197 (211)
T ss_pred HHHHHHHH-HHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccce---EEEcCCCceeeeHHHHHHHHHHHH
Confidence 55555443 44455555 347888889874433 333333222221 112223334456677777766555
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=8.4e-06 Score=70.85 Aligned_cols=148 Identities=17% Similarity=0.119 Sum_probs=89.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++.++|.|+|++|.||..++..++.++ .+++++++.. .+....++.+....+ ...+.+|..+..+.+
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~~~--~v~~~td~~~~~~~l------ 74 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDTPA--KVTGYADGELWEKAL------ 74 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCcCc--eEEEecCCCchHHHh------
Confidence 3566799999999999999999998665 4899999832 222222333222222 223444433322233
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC-------------CC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG-------------GL 158 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~-------------~~ 158 (272)
...|+||+++|..... .+.+.+.+..|+...-.+ ++.|++.+..++|+++|-. ..
T Consensus 75 --~gaDvVVitaG~~~~~------~~tR~dll~~N~~i~~~i----~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~ 142 (321)
T PTZ00325 75 --RGADLVLICAGVPRKP------GMTRDDLFNTNAPIVRDL----VAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKA 142 (321)
T ss_pred --CCCCEEEECCCCCCCC------CCCHHHHHHHHHHHHHHH----HHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhc
Confidence 4699999999973221 123566788887776544 4455666666777777732 22
Q ss_pred CCCCCChhhHHHHHHHHH--HHHHHHHHH
Q 024125 159 SHVGSGSIYGATKAAMNQ--LTRNLACEW 185 (272)
Q Consensus 159 ~~~~~~~~Y~~sK~a~~~--~~~~la~el 185 (272)
.+++....|+.+- ++. |-..+++.+
T Consensus 143 sg~p~~~viG~g~--LDs~R~r~~la~~l 169 (321)
T PTZ00325 143 GVYDPRKLFGVTT--LDVVRARKFVAEAL 169 (321)
T ss_pred cCCChhheeechh--HHHHHHHHHHHHHh
Confidence 3455666777762 443 344555555
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.32 E-value=9.3e-06 Score=70.64 Aligned_cols=151 Identities=15% Similarity=0.116 Sum_probs=95.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
..++|.|||++|.+|.+++..|+.++. ++++++.++ .+....++.+...... ..++++.++..+.+
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~--i~~~~~~~d~~~~l-------- 84 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQ--VRGFLGDDQLGDAL-------- 84 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCce--EEEEeCCCCHHHHc--------
Confidence 347899999999999999999997764 799999877 2221223332222211 12322222232233
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CeEEEecCCCC------------CCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGG------------LSH 160 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~ii~vsS~~~------------~~~ 160 (272)
...|+||++||..... ...++..+..|+.....+.+.+ .+... +.++++|.... ..+
T Consensus 85 ~~aDiVVitAG~~~~~------g~~R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~ 154 (323)
T PLN00106 85 KGADLVIIPAGVPRKP------GMTRDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPVNSTVPIAAEVLKKAGV 154 (323)
T ss_pred CCCCEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCccccHHHHHHHHHHcCC
Confidence 5799999999974321 1235667888887766655555 44443 45555555553 124
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccC
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKD 188 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~ 188 (272)
+++...|+.++.-...|-..+++++.-.
T Consensus 155 ~p~~~viG~~~LDs~Rl~~~lA~~lgv~ 182 (323)
T PLN00106 155 YDPKKLFGVTTLDVVRANTFVAEKKGLD 182 (323)
T ss_pred CCcceEEEEecchHHHHHHHHHHHhCCC
Confidence 5666788998877777888888888544
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.4e-06 Score=72.30 Aligned_cols=73 Identities=23% Similarity=0.224 Sum_probs=55.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-C-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGL-G-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~-G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++++|+|+||||+|.||+.++++|+++ | .+++++.|+.+++.++.+++.. .|+. ++.+ .
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~~-------~ 212 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLEE-------A 212 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHHH-------H
Confidence 589999999999999999999999864 5 4899999998888877665421 2222 2222 2
Q ss_pred cCCCccEEEECCCCC
Q 024125 92 FNGKLNILVNNVGTN 106 (272)
Q Consensus 92 ~~~~id~li~~ag~~ 106 (272)
+ ...|+|+++++..
T Consensus 213 l-~~aDiVv~~ts~~ 226 (340)
T PRK14982 213 L-PEADIVVWVASMP 226 (340)
T ss_pred H-ccCCEEEECCcCC
Confidence 2 4699999999864
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.5e-06 Score=73.71 Aligned_cols=76 Identities=25% Similarity=0.317 Sum_probs=65.3
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+++||.|+ |++|+.+|+.|+++| .+|++.+|+.++.++...... .++...++|+.|.+++.++++ ..
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~--------~~ 69 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIK--------DF 69 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHh--------cC
Confidence 67899999 999999999999999 699999999988887765432 378889999999999888885 34
Q ss_pred cEEEECCCC
Q 024125 97 NILVNNVGT 105 (272)
Q Consensus 97 d~li~~ag~ 105 (272)
|++||++..
T Consensus 70 d~VIn~~p~ 78 (389)
T COG1748 70 DLVINAAPP 78 (389)
T ss_pred CEEEEeCCc
Confidence 999999974
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.1e-06 Score=74.49 Aligned_cols=75 Identities=24% Similarity=0.344 Sum_probs=59.8
Q ss_pred EEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 20 ALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|+|.|+ |.+|+.+++.|++++. +|++.+|+.++++++.+++ ...++...++|+.|.+++.+++ ...|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~--------~~~d 69 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELL--------RGCD 69 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHH--------TTSS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHH--------hcCC
Confidence 689999 9999999999999874 7999999999988887655 4568889999999999988887 4579
Q ss_pred EEEECCCC
Q 024125 98 ILVNNVGT 105 (272)
Q Consensus 98 ~li~~ag~ 105 (272)
+||||++.
T Consensus 70 vVin~~gp 77 (386)
T PF03435_consen 70 VVINCAGP 77 (386)
T ss_dssp EEEE-SSG
T ss_pred EEEECCcc
Confidence 99999985
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=1e-05 Score=73.99 Aligned_cols=77 Identities=26% Similarity=0.300 Sum_probs=58.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|+++|+|+++ +|.++|+.|+++|++|.+++++. +..++..+++...+. .++..|..+. ..
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~------------~~ 66 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGI--ELVLGEYPEE------------FL 66 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC--EEEeCCcchh------------Hh
Confidence 57899999999888 99999999999999999999875 444554555554443 3556666541 11
Q ss_pred CCCccEEEECCCCC
Q 024125 93 NGKLNILVNNVGTN 106 (272)
Q Consensus 93 ~~~id~li~~ag~~ 106 (272)
+.+|+||+++|..
T Consensus 67 -~~~d~vv~~~g~~ 79 (450)
T PRK14106 67 -EGVDLVVVSPGVP 79 (450)
T ss_pred -hcCCEEEECCCCC
Confidence 4699999999974
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.1e-05 Score=66.59 Aligned_cols=79 Identities=23% Similarity=0.310 Sum_probs=67.5
Q ss_pred EEEEeCCCChHHHHHHHHHHH----CCCEEEEeeCChHHHHHHHHHHHhCC----CeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAG----LGAVVHTCSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~----~G~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
-++|.||+|+-|.-+++.+.. .|..+.+.+|+++++++.++.+.+.. .....+.+|.+|++++.++..
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak---- 82 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK---- 82 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence 489999999999999999998 67789999999999999998886653 123377899999999988884
Q ss_pred HcCCCccEEEECCCC
Q 024125 91 KFNGKLNILVNNVGT 105 (272)
Q Consensus 91 ~~~~~id~li~~ag~ 105 (272)
+..+|+||+|.
T Consensus 83 ----~~~vivN~vGP 93 (423)
T KOG2733|consen 83 ----QARVIVNCVGP 93 (423)
T ss_pred ----hhEEEEecccc
Confidence 57899999995
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.4e-05 Score=60.94 Aligned_cols=157 Identities=18% Similarity=0.147 Sum_probs=100.8
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+.++++.++|.||+|-.|..+.+++++++- +|+++.|++....+. ...+.....|.+..++....+
T Consensus 13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------~k~v~q~~vDf~Kl~~~a~~~---- 81 (238)
T KOG4039|consen 13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------DKVVAQVEVDFSKLSQLATNE---- 81 (238)
T ss_pred HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------cceeeeEEechHHHHHHHhhh----
Confidence 3567889999999999999999999999985 899888875332222 234555566765554432222
Q ss_pred HHcCCCccEEEECCCCCCCC----CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh
Q 024125 90 SKFNGKLNILVNNVGTNIRK----PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~ 165 (272)
..+|+.++|-|..... .+-..+.+ + .+.+.+.+ +..+...++.+||..+.... ..
T Consensus 82 ----qg~dV~FcaLgTTRgkaGadgfykvDhD-----y------vl~~A~~A----Ke~Gck~fvLvSS~GAd~sS--rF 140 (238)
T KOG4039|consen 82 ----QGPDVLFCALGTTRGKAGADGFYKVDHD-----Y------VLQLAQAA----KEKGCKTFVLVSSAGADPSS--RF 140 (238)
T ss_pred ----cCCceEEEeecccccccccCceEeechH-----H------HHHHHHHH----HhCCCeEEEEEeccCCCccc--ce
Confidence 4799999998863221 11112221 1 12233333 56677899999998765432 35
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~ 206 (272)
.|--.|.-++.=+..|-- =++..+.||++..+...
T Consensus 141 lY~k~KGEvE~~v~eL~F------~~~~i~RPG~ll~~R~e 175 (238)
T KOG4039|consen 141 LYMKMKGEVERDVIELDF------KHIIILRPGPLLGERTE 175 (238)
T ss_pred eeeeccchhhhhhhhccc------cEEEEecCcceeccccc
Confidence 677778766654432211 26788899998776653
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00027 Score=60.96 Aligned_cols=79 Identities=19% Similarity=0.293 Sum_probs=54.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++++|+|+++++|.++++.+...|++|++++++.++.+.+. ++ +.+. ..|..+.+..+.+.+.. . +..
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~---~~~~~~~~~~~~~~~~~-~--~~~ 213 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA---GADA---VFNYRAEDLADRILAAT-A--GQG 213 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEeCCCcCHHHHHHHHc-C--CCc
Confidence 5799999999999999999999999999999999887655542 22 2221 23444444333333222 1 136
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++++|++
T Consensus 214 ~d~vi~~~~ 222 (325)
T cd08253 214 VDVIIEVLA 222 (325)
T ss_pred eEEEEECCc
Confidence 999999987
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00011 Score=62.91 Aligned_cols=78 Identities=21% Similarity=0.348 Sum_probs=57.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++|+++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+++.... .+. .++ +..+.+
T Consensus 119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~~~~~------ 183 (278)
T PRK00258 119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL----ELQEEL------ 183 (278)
T ss_pred CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cchhcc------
Confidence 3678999999997 899999999999999 699999999999888877764321 111 111 111111
Q ss_pred cCCCccEEEECCCCCC
Q 024125 92 FNGKLNILVNNVGTNI 107 (272)
Q Consensus 92 ~~~~id~li~~ag~~~ 107 (272)
...|+|||+.....
T Consensus 184 --~~~DivInaTp~g~ 197 (278)
T PRK00258 184 --ADFDLIINATSAGM 197 (278)
T ss_pred --ccCCEEEECCcCCC
Confidence 46899999987644
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.2e-05 Score=65.78 Aligned_cols=118 Identities=11% Similarity=0.094 Sum_probs=66.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEeeCChHH--HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLG-------AVVHTCSRNEVE--LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G-------~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
-+|+||||+|.+|.+++..|+.++ .+|+++++++.. ++....++.+.. .....|++...+..+.+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~---~~~~~~~~~~~~~~~~l--- 76 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA---FPLLKSVVATTDPEEAF--- 76 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc---ccccCCceecCCHHHHh---
Confidence 368999999999999999999854 589999986532 221111111000 00011222222221222
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCeEEEecCCC
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS--GVGSIVFISSVG 156 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~ii~vsS~~ 156 (272)
...|+|||+||..... ..+. .+.++.|+.= .+.+.+.+.+. +.+.+|.+|...
T Consensus 77 -----~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~i----~~~i~~~i~~~~~~~~iiivvsNPv 131 (325)
T cd01336 77 -----KDVDVAILVGAMPRKE---GMER---KDLLKANVKI----FKEQGEALDKYAKKNVKVLVVGNPA 131 (325)
T ss_pred -----CCCCEEEEeCCcCCCC---CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEecCcH
Confidence 4799999999974321 1222 4456666543 35555555555 357788887643
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.86 E-value=2.2e-05 Score=63.88 Aligned_cols=154 Identities=16% Similarity=0.205 Sum_probs=95.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGL-GA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~-G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+-+--+|||||+-|-+|..+|..|-.+ |- .|++.+-..... .+-+ .--++..|+-|..++++++-.
T Consensus 41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-----~V~~---~GPyIy~DILD~K~L~eIVVn---- 108 (366)
T KOG2774|consen 41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-----NVTD---VGPYIYLDILDQKSLEEIVVN---- 108 (366)
T ss_pred cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-----hhcc---cCCchhhhhhccccHHHhhcc----
Confidence 345568999999999999999988655 65 455554222111 1111 122456788888887776632
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEe-cCCCCCCCC---------
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFI-SSVGGLSHV--------- 161 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~v-sS~~~~~~~--------- 161 (272)
.++|.++|-.+.... ......--..++|+.|..++++.+.. .+ --+|+ |.+.++.+.
T Consensus 109 --~RIdWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vAa~----~k--L~iFVPSTIGAFGPtSPRNPTPdl 175 (366)
T KOG2774|consen 109 --KRIDWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVAAK----HK--LKVFVPSTIGAFGPTSPRNPTPDL 175 (366)
T ss_pred --cccceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHHHH----cC--eeEeecccccccCCCCCCCCCCCe
Confidence 589999997653110 01111223467899999998887733 22 33455 444444332
Q ss_pred ---CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEe
Q 024125 162 ---GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195 (272)
Q Consensus 162 ---~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v 195 (272)
.+...|+.||--.+.+.+.+...+ |+.+-+.
T Consensus 176 tIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~ 209 (366)
T KOG2774|consen 176 TIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSM 209 (366)
T ss_pred eeecCceeechhHHHHHHHHHHHHhhc---Cccceec
Confidence 123569999999999999888776 4444444
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.7e-05 Score=69.60 Aligned_cols=81 Identities=22% Similarity=0.252 Sum_probs=55.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|+++|||+++ +|.++++.|+++|++|++.+++........+++...+..+. ... +..++ .+
T Consensus 1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~--~~~--~~~~~---~~------ 66 (447)
T PRK02472 1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI--CGS--HPLEL---LD------ 66 (447)
T ss_pred CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE--eCC--CCHHH---hc------
Confidence 467899999999986 99999999999999999999876444444445554444332 111 11111 11
Q ss_pred CCCccEEEECCCCCCC
Q 024125 93 NGKLNILVNNVGTNIR 108 (272)
Q Consensus 93 ~~~id~li~~ag~~~~ 108 (272)
..+|+||+++|+...
T Consensus 67 -~~~d~vV~s~gi~~~ 81 (447)
T PRK02472 67 -EDFDLMVKNPGIPYT 81 (447)
T ss_pred -CcCCEEEECCCCCCC
Confidence 248999999998543
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00016 Score=56.04 Aligned_cols=76 Identities=20% Similarity=0.304 Sum_probs=56.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++++++|+|+ |++|.++++.|.+.| .+|.+++|+.++.+++.+++.... +..+.++.++. +
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---~------- 79 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL---L------- 79 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc---c-------
Confidence 467899999998 899999999999996 789999999988887776654321 12233333322 1
Q ss_pred CCCccEEEECCCCC
Q 024125 93 NGKLNILVNNVGTN 106 (272)
Q Consensus 93 ~~~id~li~~ag~~ 106 (272)
...|+||++....
T Consensus 80 -~~~Dvvi~~~~~~ 92 (155)
T cd01065 80 -AEADLIINTTPVG 92 (155)
T ss_pred -ccCCEEEeCcCCC
Confidence 4799999999764
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00024 Score=60.54 Aligned_cols=79 Identities=15% Similarity=0.238 Sum_probs=58.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
..++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+++...+. +.....| + . ..
T Consensus 114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~-----~---~------~~- 176 (270)
T TIGR00507 114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSMD-----E---L------PL- 176 (270)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEechh-----h---h------cc-
Confidence 356899999999 6999999999999999999999999988888877654332 2221111 1 0 01
Q ss_pred CCccEEEECCCCCCCC
Q 024125 94 GKLNILVNNVGTNIRK 109 (272)
Q Consensus 94 ~~id~li~~ag~~~~~ 109 (272)
...|+|||+.+.....
T Consensus 177 ~~~DivInatp~gm~~ 192 (270)
T TIGR00507 177 HRVDLIINATSAGMSG 192 (270)
T ss_pred cCccEEEECCCCCCCC
Confidence 3689999999875433
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0002 Score=57.34 Aligned_cols=80 Identities=23% Similarity=0.227 Sum_probs=48.7
Q ss_pred CCCCEEEEeCCC----------------ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCH
Q 024125 15 LKGMTALVTGGT----------------RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78 (272)
Q Consensus 15 l~~k~vlItGa~----------------~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 78 (272)
|+||+||||+|. |-.|.++|++++.+|++|.++.....- .. ...+.. .++.+.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~-~~--------p~~~~~--i~v~sa 69 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSL-PP--------PPGVKV--IRVESA 69 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEE--EE-SSH
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccc-cc--------cccceE--EEecch
Confidence 579999999875 899999999999999999888765321 10 112333 334444
Q ss_pred HHHHHHHHHHHHHcCCCccEEEECCCCCCCC
Q 024125 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRK 109 (272)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 109 (272)
++ +.+.+.+.+ ...|++|++|++....
T Consensus 70 ~e---m~~~~~~~~-~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 70 EE---MLEAVKELL-PSADIIIMAAAVSDFR 96 (185)
T ss_dssp HH---HHHHHHHHG-GGGSEEEE-SB--SEE
T ss_pred hh---hhhhhcccc-CcceeEEEecchhhee
Confidence 44 455555555 4579999999985443
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0002 Score=66.80 Aligned_cols=48 Identities=23% Similarity=0.185 Sum_probs=42.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 61 (272)
.++++|+++|+|+ ||+|++++..|+++|++|+++.|+.++.+++.+++
T Consensus 375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 3578999999999 59999999999999999999999988888877655
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0017 Score=55.00 Aligned_cols=143 Identities=13% Similarity=0.154 Sum_probs=85.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhCCC--eEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSKGF--VVSGS 71 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~ 71 (272)
.|++.+|+|.|+ ||+|.+++..|++.|. ++.+++.+. .+.+.+.+.+.+.+. ++..+
T Consensus 27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i 105 (268)
T PRK15116 27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV 105 (268)
T ss_pred HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence 367889999976 5999999999999995 788887542 122233344433322 33333
Q ss_pred EecCCCHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEE
Q 024125 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVF 151 (272)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~ 151 (272)
. +.-+.+...+++. ...|+||.+... +..-..+.+.+ ++.+ -.+|.
T Consensus 106 ~-~~i~~e~~~~ll~-------~~~D~VIdaiD~---------------------~~~k~~L~~~c----~~~~-ip~I~ 151 (268)
T PRK15116 106 D-DFITPDNVAEYMS-------AGFSYVIDAIDS---------------------VRPKAALIAYC----RRNK-IPLVT 151 (268)
T ss_pred e-cccChhhHHHHhc-------CCCCEEEEcCCC---------------------HHHHHHHHHHH----HHcC-CCEEE
Confidence 2 2223344433331 357888877762 11111222332 3332 35566
Q ss_pred ecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHcc-CCee
Q 024125 152 ISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK-DNIR 191 (272)
Q Consensus 152 vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~-~~i~ 191 (272)
.++..+...+.....-..+|.-..-|++.++++|++ +||+
T Consensus 152 ~gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~ 192 (268)
T PRK15116 152 TGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV 192 (268)
T ss_pred ECCcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence 665555555444455667788888999999999988 5664
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0013 Score=56.52 Aligned_cols=43 Identities=23% Similarity=0.435 Sum_probs=38.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~ 56 (272)
.+++|++++|+|. |++|+++++.|...|++|++++|+.++.+.
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~ 189 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR 189 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 5789999999999 669999999999999999999999876544
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0041 Score=55.46 Aligned_cols=76 Identities=18% Similarity=0.182 Sum_probs=55.3
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+.+++++|.|+ |.+|+.+++.+...|++|++++|+.++.+.+.+.+. .. +..+..+.+.+.+.+ .
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g---~~---v~~~~~~~~~l~~~l--------~ 229 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG---GR---IHTRYSNAYEIEDAV--------K 229 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC---ce---eEeccCCHHHHHHHH--------c
Confidence 56788999988 789999999999999999999999887665544331 11 223445555544433 4
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
..|++|++++.
T Consensus 230 ~aDvVI~a~~~ 240 (370)
T TIGR00518 230 RADLLIGAVLI 240 (370)
T ss_pred cCCEEEEcccc
Confidence 68999999865
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0027 Score=48.52 Aligned_cols=114 Identities=12% Similarity=0.104 Sum_probs=72.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+|.|+|++|.+|.+++..|...+. ++++++++++..+....++++. ........ .+.+++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~---------- 67 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL---------- 67 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG----------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc----------
Confidence 3689999999999999999999875 8999999988877776666542 22333222 222221
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV 155 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~ 155 (272)
...|++|..||...... .+ -.+.++.|..-.-.+.+.+.++ .+.+.++.+|.+
T Consensus 68 --~~aDivvitag~~~~~g---~s---R~~ll~~N~~i~~~~~~~i~~~---~p~~~vivvtNP 120 (141)
T PF00056_consen 68 --KDADIVVITAGVPRKPG---MS---RLDLLEANAKIVKEIAKKIAKY---APDAIVIVVTNP 120 (141)
T ss_dssp --TTESEEEETTSTSSSTT---SS---HHHHHHHHHHHHHHHHHHHHHH---STTSEEEE-SSS
T ss_pred --ccccEEEEecccccccc---cc---HHHHHHHhHhHHHHHHHHHHHh---CCccEEEEeCCc
Confidence 46999999999742211 12 2345566655444444443322 345777777643
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0017 Score=53.92 Aligned_cols=148 Identities=17% Similarity=0.183 Sum_probs=87.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhCC--CeEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSKG--FVVSGS 71 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~ 71 (272)
.|++++|+|.|. ||+|.++++.|++.|. ++.+++.+. .+.+.+.+.+.+.+ .++..+
T Consensus 8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~ 86 (231)
T cd00755 8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV 86 (231)
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence 367889999986 6999999999999998 788887543 12333344444333 344444
Q ss_pred EecCCCHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEE
Q 024125 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVF 151 (272)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~ 151 (272)
...++ .+....++. ...|+||.|... . ..-..+.+.+ ++.+ -.+|.
T Consensus 87 ~~~i~-~~~~~~l~~-------~~~D~VvdaiD~----------~-----------~~k~~L~~~c----~~~~-ip~I~ 132 (231)
T cd00755 87 EEFLT-PDNSEDLLG-------GDPDFVVDAIDS----------I-----------RAKVALIAYC----RKRK-IPVIS 132 (231)
T ss_pred eeecC-HhHHHHHhc-------CCCCEEEEcCCC----------H-----------HHHHHHHHHH----HHhC-CCEEE
Confidence 43333 233333331 358888887652 1 1111122333 2332 24444
Q ss_pred ecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCee--EEEee
Q 024125 152 ISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR--TNSVA 196 (272)
Q Consensus 152 vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~--v~~v~ 196 (272)
..+..+...+.....-..+|.-..-+++.++++|+++|++ +.+|.
T Consensus 133 s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~ 179 (231)
T cd00755 133 SMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY 179 (231)
T ss_pred EeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence 4444444443333445667777888999999999998885 44444
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00056 Score=58.67 Aligned_cols=80 Identities=25% Similarity=0.349 Sum_probs=56.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|+++|.|+ ||.|++++.+|++.|+ +|+++.|+.++.+++.+++.... .+. . +...++....+
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~--~--~~~~~~~~~~~------- 188 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VIT--R--LEGDSGGLAIE------- 188 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cce--e--ccchhhhhhcc-------
Confidence 467899999976 8999999999999997 79999999999988887764321 111 1 11112221111
Q ss_pred CCCccEEEECCCCCC
Q 024125 93 NGKLNILVNNVGTNI 107 (272)
Q Consensus 93 ~~~id~li~~ag~~~ 107 (272)
...|+|||+.....
T Consensus 189 -~~~DiVInaTp~g~ 202 (282)
T TIGR01809 189 -KAAEVLVSTVPADV 202 (282)
T ss_pred -cCCCEEEECCCCCC
Confidence 46899999987643
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00086 Score=58.34 Aligned_cols=117 Identities=15% Similarity=0.099 Sum_probs=63.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHH-C--CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 18 MTALVTGGTRGIGQATVEELAG-L--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~-~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++++|.||+|++|++++..+.. . +..+++++|++. .+...-++.+........-++..+ +.+.+ .
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d---~~~~l--------~ 68 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGED---PTPAL--------E 68 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCC---HHHHc--------C
Confidence 5799999999999999998855 3 347888888743 211111222211111111111122 11112 3
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-eEEEecCCC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVG 156 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~ii~vsS~~ 156 (272)
..|+||.++|...... .+ -...+..|....- .+++.|++.+.. .|+++|-+.
T Consensus 69 ~~DiVIitaG~~~~~~---~~---R~dll~~N~~i~~----~ii~~i~~~~~~~ivivvsNP~ 121 (312)
T PRK05086 69 GADVVLISAGVARKPG---MD---RSDLFNVNAGIVK----NLVEKVAKTCPKACIGIITNPV 121 (312)
T ss_pred CCCEEEEcCCCCCCCC---CC---HHHHHHHHHHHHH----HHHHHHHHhCCCeEEEEccCch
Confidence 5999999999743221 12 2345666765554 444455555444 445555444
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0021 Score=55.85 Aligned_cols=79 Identities=28% Similarity=0.388 Sum_probs=56.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+++++|+|+++++|.++++.+...|++|++++++.++.+.+. . .+... ..|..+.+..+.+.+... +..
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~~~~~---~~~~~~~~~~~~~~~~~~---~~~ 235 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-E---LGADY---VIDYRKEDFVREVRELTG---KRG 235 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCCe---EEecCChHHHHHHHHHhC---CCC
Confidence 5789999999999999999999999999999999887655442 2 22221 235555555544443322 136
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++++++|
T Consensus 236 ~d~~i~~~g 244 (342)
T cd08266 236 VDVVVEHVG 244 (342)
T ss_pred CcEEEECCc
Confidence 999999998
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00084 Score=58.61 Aligned_cols=150 Identities=11% Similarity=0.070 Sum_probs=94.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCChHH--HHHHHHHHHhCC----CeEEEEEecCCCHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEVE--LNKCLKEWQSKG----FVVSGSVCDAASPDQREKL 84 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-------~v~~~~r~~~~--~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~ 84 (272)
++|.|+|++|.+|.+++..++.+|. ++++++.+++. ++....++.+.. .++.. . ..+.++
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~--~~~~~~---- 75 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T--DDPNVA---- 75 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e--cCcHHH----
Confidence 6899999999999999999998875 69999985433 443333333221 11111 1 111111
Q ss_pred HHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCeEEEecCCCC-----
Q 024125 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGG----- 157 (272)
Q Consensus 85 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~ii~vsS~~~----- 157 (272)
+ ...|++|.+||.... + ..+ -.+.+..|+. +.+.+.+.+.+.. .+.+|++|....
T Consensus 76 -------~-~daDivvitaG~~~k-~--g~t---R~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~ 137 (322)
T cd01338 76 -------F-KDADWALLVGAKPRG-P--GME---RADLLKANGK----IFTAQGKALNDVASRDVKVLVVGNPCNTNALI 137 (322)
T ss_pred -------h-CCCCEEEEeCCCCCC-C--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH
Confidence 1 479999999997422 1 112 2334555544 4456666666543 578888876442
Q ss_pred ---CC-CCCCChhhHHHHHHHHHHHHHHHHHHccC--CeeE
Q 024125 158 ---LS-HVGSGSIYGATKAAMNQLTRNLACEWAKD--NIRT 192 (272)
Q Consensus 158 ---~~-~~~~~~~Y~~sK~a~~~~~~~la~el~~~--~i~v 192 (272)
.. ..+....|+.++.--..|...+++.+.-. .|+.
T Consensus 138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~ 178 (322)
T cd01338 138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN 178 (322)
T ss_pred HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence 22 25666789999999999999999988543 3553
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.001 Score=57.05 Aligned_cols=78 Identities=14% Similarity=0.109 Sum_probs=56.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|+++|.|+ ||.|++++..|++.|. +|++++|+.++.+.+.+++............ +++.+.+
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~------- 190 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAAAL------- 190 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHhhh-------
Confidence 467899999998 6799999999999998 7999999999999988887643222222111 1111111
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
...|+|||+...
T Consensus 191 -~~aDiVInaTp~ 202 (284)
T PRK12549 191 -AAADGLVHATPT 202 (284)
T ss_pred -CCCCEEEECCcC
Confidence 368999999644
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0013 Score=56.34 Aligned_cols=82 Identities=15% Similarity=0.093 Sum_probs=57.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|+++|.|+ ||-|++++..|++.|+ +++++.|+.++.+++.+.+............+ ..+..+..
T Consensus 124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~------- 192 (283)
T PRK14027 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI------- 192 (283)
T ss_pred CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH-------
Confidence 467899999998 8999999999999997 79999999999988887765321111111122 12221111
Q ss_pred CCCccEEEECCCCCC
Q 024125 93 NGKLNILVNNVGTNI 107 (272)
Q Consensus 93 ~~~id~li~~ag~~~ 107 (272)
...|+|||+..+..
T Consensus 193 -~~~divINaTp~Gm 206 (283)
T PRK14027 193 -AAADGVVNATPMGM 206 (283)
T ss_pred -hhcCEEEEcCCCCC
Confidence 35899999887643
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00061 Score=61.46 Aligned_cols=74 Identities=16% Similarity=0.266 Sum_probs=55.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|+++|.|+ |++|+.++++|+++|. +++++.|+.++.+.+.+++.. . ..+ ..++..+.+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~--~~~-----~~~~l~~~l------- 240 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--A--SAH-----YLSELPQLI------- 240 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--C--eEe-----cHHHHHHHh-------
Confidence 588999999999 9999999999999996 799999999888877766531 1 111 122222222
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
...|+||+|.+.
T Consensus 241 -~~aDiVI~aT~a 252 (414)
T PRK13940 241 -KKADIIIAAVNV 252 (414)
T ss_pred -ccCCEEEECcCC
Confidence 468999999875
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0018 Score=70.14 Aligned_cols=178 Identities=16% Similarity=0.179 Sum_probs=113.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+.++.++|+..+++++.+++..|.++|+.|.++..... .......+ ...+..+...-.+.+++..+++.+....
T Consensus 1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1826 (2582)
T TIGR02813 1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASPL---ASAIASVTLGTIDDTSIEAVIKDIEEKT- 1826 (2582)
T ss_pred cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cccccccc---ccccccccccccchHHHHHHHHhhhccc-
Confidence 455888999988999999999999999998887742211 00000000 1111122344445677777777776654
Q ss_pred CCccEEEECCCCCCC--CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh----
Q 024125 94 GKLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY---- 167 (272)
Q Consensus 94 ~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y---- 167 (272)
+.++.+||..+.... ....... ....-...+...+.+.|.+.+.+...+.+.++.++...|..++......
T Consensus 1827 ~~~~g~i~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~ 1903 (2582)
T TIGR02813 1827 AQIDGFIHLQPQHKSVADKVDAIE---LPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQ 1903 (2582)
T ss_pred cccceEEEeccccccccccccccc---cchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccc
Confidence 679999998775321 0111111 0111113344466777777666655556788889988776665433221
Q ss_pred ----HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCc
Q 024125 168 ----GATKAAMNQLTRNLACEWAKDNIRTNSVAPWY 199 (272)
Q Consensus 168 ----~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~ 199 (272)
....+++.+|+|++++|+....+|...+.|..
T Consensus 1904 ~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813 1904 QVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred ccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence 34579999999999999988788888888864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0013 Score=59.01 Aligned_cols=83 Identities=12% Similarity=0.109 Sum_probs=57.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+.|+|||||++..+|.++++.|.+.|.+|++++.+........+.+. .+..+...-.+.+...+.+.++.++. +
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d----~~~~~p~p~~d~~~~~~~L~~i~~~~--~ 76 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD----GFYTIPSPRWDPDAYIQALLSIVQRE--N 76 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh----heEEeCCCCCCHHHHHHHHHHHHHHc--C
Confidence 46899999999999999999999999999999988655432222221 22223223345555555555666664 5
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+||-...
T Consensus 77 id~vIP~~e 85 (389)
T PRK06849 77 IDLLIPTCE 85 (389)
T ss_pred CCEEEECCh
Confidence 899987664
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00078 Score=58.83 Aligned_cols=112 Identities=12% Similarity=0.119 Sum_probs=66.1
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCCh--HHHHHHHHHHHhCCCeEEEEEecCCCHHHH--H--HHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQR--E--KLI 85 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~--~~~ 85 (272)
+|.||||+|.+|..++..|+.+|. +++++++++ +.++ ....|+.|.... . .+-
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~--------------g~~~Dl~d~~~~~~~~~~i~ 67 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE--------------GVVMELQDCAFPLLKGVVIT 67 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc--------------eeeeehhhhcccccCCcEEe
Confidence 589999999999999999998663 499999876 3322 222333332100 0 000
Q ss_pred HHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCeEEEecCC
Q 024125 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS--GVGSIVFISSV 155 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~ii~vsS~ 155 (272)
....+.+ ...|+||+.||...... .+ -.+.+..|+. +.+.+.+.+.+. +.+.+|.+|-+
T Consensus 68 ~~~~~~~-~~aDiVVitAG~~~~~g---~t---R~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNP 128 (323)
T cd00704 68 TDPEEAF-KDVDVAILVGAFPRKPG---ME---RADLLRKNAK----IFKEQGEALNKVAKPTVKVLVVGNP 128 (323)
T ss_pred cChHHHh-CCCCEEEEeCCCCCCcC---Cc---HHHHHHHhHH----HHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 1111222 57999999999742211 12 2345555544 456666666665 45677777653
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0017 Score=56.77 Aligned_cols=115 Identities=13% Similarity=0.127 Sum_probs=67.8
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHH--HHH--HH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQRE--KLI--QE 87 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~~--~~ 87 (272)
+|.|+|++|.+|.+++..|+.++. .+++++++++.. .......|+.|..... ... ..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~ 68 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD 68 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence 478999999999999999988654 489999865431 0112233444433100 000 01
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCeEEEecCCC
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS--GVGSIVFISSVG 156 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~ii~vsS~~ 156 (272)
..+.+ ...|+||++||..... .++..+.+..|+.- .+.+.+.+.+. +.+.+|++|.+.
T Consensus 69 ~~~~~-~~aDiVVitAG~~~~~------~~tr~~ll~~N~~i----~k~i~~~i~~~~~~~~iiivvsNPv 128 (324)
T TIGR01758 69 PAVAF-TDVDVAILVGAFPRKE------GMERRDLLSKNVKI----FKEQGRALDKLAKKDCKVLVVGNPA 128 (324)
T ss_pred hHHHh-CCCCEEEEcCCCCCCC------CCcHHHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEeCCcH
Confidence 11222 5799999999974221 12345566666544 45555566665 357788877543
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0012 Score=57.93 Aligned_cols=78 Identities=28% Similarity=0.445 Sum_probs=52.2
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC-C
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG-K 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~ 95 (272)
|++|||+||+||+|...++-....|+.++++..+.++.+ .+++ .+.+.. .|..+.+ +.+++.+..++ .
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~---lGAd~v---i~y~~~~----~~~~v~~~t~g~g 211 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKE---LGADHV---INYREED----FVEQVRELTGGKG 211 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHh---cCCCEE---EcCCccc----HHHHHHHHcCCCC
Confidence 899999999999999999988888977777666666655 3333 333322 2233322 33444433334 5
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|+++.+.|.
T Consensus 212 vDvv~D~vG~ 221 (326)
T COG0604 212 VDVVLDTVGG 221 (326)
T ss_pred ceEEEECCCH
Confidence 9999999984
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0056 Score=53.18 Aligned_cols=113 Identities=15% Similarity=0.125 Sum_probs=71.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++|.|.|+ |++|++++..|+.+| .+|+++++++++.+....++.+. ....... . .+.++ +
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-------l--- 66 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-------C--- 66 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-------h---
Confidence 46888996 899999999999999 48999999998888777776543 1122221 1 22221 1
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
...|++|+++|..... ..+. ...++.|..= ++.+.+.+++. +.+.++++|.+.
T Consensus 67 --~~aDIVIitag~~~~~---g~~R---~dll~~N~~i----~~~~~~~i~~~~~~~~vivvsNP~ 120 (306)
T cd05291 67 --KDADIVVITAGAPQKP---GETR---LDLLEKNAKI----MKSIVPKIKASGFDGIFLVASNPV 120 (306)
T ss_pred --CCCCEEEEccCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCeEEEEecChH
Confidence 4699999999974221 1122 2344455443 44555555544 357788887544
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.012 Score=50.74 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=37.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~ 56 (272)
.++.+++++|.|. |++|+.+++.|.+.|++|.+++|+.++.+.
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~ 190 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR 190 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 4678999999997 679999999999999999999999766443
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00065 Score=58.20 Aligned_cols=77 Identities=18% Similarity=0.183 Sum_probs=61.2
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
...++|.||+|..|.-++++|+++|.+.++.+|+.+++..+.+.+. ..+....+++ ++.+++.+ .+.
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG---~~~~~~p~~~--p~~~~~~~--------~~~ 72 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG---PEAAVFPLGV--PAALEAMA--------SRT 72 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC---ccccccCCCC--HHHHHHHH--------hcc
Confidence 3568999999999999999999999999999999999998887663 3344444443 55555554 578
Q ss_pred cEEEECCCCC
Q 024125 97 NILVNNVGTN 106 (272)
Q Consensus 97 d~li~~ag~~ 106 (272)
++|+||+|.+
T Consensus 73 ~VVlncvGPy 82 (382)
T COG3268 73 QVVLNCVGPY 82 (382)
T ss_pred eEEEeccccc
Confidence 9999999964
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0036 Score=53.83 Aligned_cols=84 Identities=19% Similarity=0.217 Sum_probs=54.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE---VELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~---~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.++++|++||.|+ ||-+++++..|+..|. +|.++.|+. ++.+++.+++.... ..+.. .++.+.+.+. +
T Consensus 120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~---~- 192 (288)
T PRK12749 120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFA---E- 192 (288)
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhh---h-
Confidence 4578999999997 5669999999999997 899999984 46666666654321 11221 1221111111 1
Q ss_pred HHHHcCCCccEEEECCCCCC
Q 024125 88 VGSKFNGKLNILVNNVGTNI 107 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~ 107 (272)
.. ...|+|||+..+..
T Consensus 193 ---~~-~~aDivINaTp~Gm 208 (288)
T PRK12749 193 ---AL-ASADILTNGTKVGM 208 (288)
T ss_pred ---hc-ccCCEEEECCCCCC
Confidence 11 46899999876543
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00044 Score=56.19 Aligned_cols=48 Identities=27% Similarity=0.241 Sum_probs=42.0
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 60 (272)
..+++||+++|+|.+ .+|+++++.|.+.|++|++.+++.++.++..+.
T Consensus 23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 357899999999996 899999999999999999999998877766554
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0018 Score=55.22 Aligned_cols=83 Identities=19% Similarity=0.277 Sum_probs=60.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+.++++++|.|| ||-+++++.+|++.|. +++++.|+.++.+++.+.+.+.+..+.. .+..+.+..
T Consensus 122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~---------- 188 (283)
T COG0169 122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGL---------- 188 (283)
T ss_pred cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--ccccccccc----------
Confidence 4567899999997 6899999999999996 8999999999999999888765442211 122222111
Q ss_pred cCCCccEEEECCCCCCCCC
Q 024125 92 FNGKLNILVNNVGTNIRKP 110 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~ 110 (272)
...|+|||+........
T Consensus 189 --~~~dliINaTp~Gm~~~ 205 (283)
T COG0169 189 --EEADLLINATPVGMAGP 205 (283)
T ss_pred --cccCEEEECCCCCCCCC
Confidence 13799999998754443
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0081 Score=52.34 Aligned_cols=115 Identities=10% Similarity=0.050 Sum_probs=75.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.+++|.|+|+ |.+|.+++..++.+|. ++++++++++.++....++.+.. .++... . .+.++ +
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~-------~-- 71 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD-------C-- 71 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH-------h--
Confidence 5689999998 9999999999999987 79999999988877777766432 122222 1 12221 1
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
...|++|..||..... ..+. ...++.|..-. +.+++.+.+. ..+.++++|-+.
T Consensus 72 ---~~adivIitag~~~k~---g~~R---~dll~~N~~i~----~~i~~~i~~~~~~~~vivvsNP~ 125 (315)
T PRK00066 72 ---KDADLVVITAGAPQKP---GETR---LDLVEKNLKIF----KSIVGEVMASGFDGIFLVASNPV 125 (315)
T ss_pred ---CCCCEEEEecCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCcH
Confidence 4799999999974221 1122 34455554444 4445555543 457888887543
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0022 Score=54.43 Aligned_cols=108 Identities=17% Similarity=0.188 Sum_probs=74.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+|.+++|++|+|.+|.-+.+--.-+|++|+.+.-.+|+..-+.+++. .+. -.|-... + +.+.+.+..+..
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG---fD~---~idyk~~-d---~~~~L~~a~P~G 219 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG---FDA---GIDYKAE-D---FAQALKEACPKG 219 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC---Cce---eeecCcc-c---HHHHHHHHCCCC
Confidence 48999999999999987666545569999999988888776665442 221 1243333 2 344445555567
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV 161 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~ 161 (272)
||+.+-|.|.. +..+.+++|... +||+.++-++.++..
T Consensus 220 IDvyfeNVGg~--------------------------v~DAv~~~ln~~--aRi~~CG~IS~YN~~ 257 (340)
T COG2130 220 IDVYFENVGGE--------------------------VLDAVLPLLNLF--ARIPVCGAISQYNAP 257 (340)
T ss_pred eEEEEEcCCch--------------------------HHHHHHHhhccc--cceeeeeehhhcCCC
Confidence 99999999951 123566666433 799999988887765
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0033 Score=55.28 Aligned_cols=81 Identities=15% Similarity=0.293 Sum_probs=57.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---------------------HHHHHHHHHHHhC--CCeEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE---------------------VELNKCLKEWQSK--GFVVS 69 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~---------------------~~~~~~~~~~~~~--~~~~~ 69 (272)
.|++++|+|.|+ ||+|.++++.|++.|. ++.+++++. .+.+..++.+.+. ..++.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 477899999997 6899999999999998 899998864 2334444555543 34566
Q ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 70 ~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
.+..|++ .+.+++++ ...|+||.+..
T Consensus 100 ~~~~~~~-~~~~~~~~--------~~~DlVid~~D 125 (338)
T PRK12475 100 PVVTDVT-VEELEELV--------KEVDLIIDATD 125 (338)
T ss_pred EEeccCC-HHHHHHHh--------cCCCEEEEcCC
Confidence 6666765 33444443 46899988774
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.012 Score=54.38 Aligned_cols=112 Identities=13% Similarity=0.103 Sum_probs=69.4
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC-------------HHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-------------PDQR 81 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-------------~~~~ 81 (272)
..+.+|+|+|+ |.+|...++.....|++|++++++.++++...+ .+.++..+ |..+ .+..
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes----lGA~~v~i--~~~e~~~~~~gya~~~s~~~~ 235 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES----MGAEFLEL--DFEEEGGSGDGYAKVMSEEFI 235 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeEEEe--ccccccccccchhhhcchhHH
Confidence 45889999997 699999999999999999999999988775543 34443222 2211 1111
Q ss_pred HHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCC
Q 024125 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV 155 (272)
Q Consensus 82 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~ 155 (272)
++..+.+.+.. +..|++|.+++...... +..+++..+..|+ ++++|+.++..
T Consensus 236 ~~~~~~~~~~~-~gaDVVIetag~pg~~a-------------------P~lit~~~v~~mk--pGgvIVdvg~~ 287 (509)
T PRK09424 236 KAEMALFAEQA-KEVDIIITTALIPGKPA-------------------PKLITAEMVASMK--PGSVIVDLAAE 287 (509)
T ss_pred HHHHHHHHhcc-CCCCEEEECCCCCcccC-------------------cchHHHHHHHhcC--CCCEEEEEccC
Confidence 22222222222 46999999999743211 1112345555554 34788888763
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0071 Score=49.19 Aligned_cols=81 Identities=16% Similarity=0.286 Sum_probs=53.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhCC--CeEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN-------------------EVELNKCLKEWQSKG--FVVSGS 71 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~ 71 (272)
.|.+++|+|.| .||+|.++++.|++.|. ++.+++++ ..+.+...+.+++.+ .++..+
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 96 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL 96 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 47789999998 57999999999999998 89998876 234444555555433 333333
Q ss_pred EecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
..++. .+.+.+++ ...|+||.+..
T Consensus 97 ~~~i~-~~~~~~~~--------~~~D~Vi~~~d 120 (202)
T TIGR02356 97 KERVT-AENLELLI--------NNVDLVLDCTD 120 (202)
T ss_pred hhcCC-HHHHHHHH--------hCCCEEEECCC
Confidence 33333 23333333 46899988865
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0038 Score=54.82 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=52.6
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++++||+|++|++|.++++.....|+ +|+.+++++++.+.+.+++ +....+ |..+ +++.+.+.++ .+..
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~vi---~~~~-~~~~~~i~~~---~~~g 224 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAAI---NYKT-DNVAERLREL---CPEG 224 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEEE---ECCC-CCHHHHHHHH---CCCC
Confidence 38999999999999999987777898 7999998888766555433 222221 2222 1222223332 2236
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|+++.+.|.
T Consensus 225 vd~vid~~g~ 234 (345)
T cd08293 225 VDVYFDNVGG 234 (345)
T ss_pred ceEEEECCCc
Confidence 9999998873
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0016 Score=54.89 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=53.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+++||+|||+- |+.+++.|.++|++|+.+.+++...+.+.+ .+ ...+..+.-+.+++.+++.+ .++|
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g--~~~v~~g~l~~~~l~~~l~~------~~i~ 67 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ--ALTVHTGALDPQELREFLKR------HSID 67 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC--CceEEECCCCHHHHHHHHHh------cCCC
Confidence 47999999998 999999999999999999888765443321 11 11233556667776666643 3699
Q ss_pred EEEECCC
Q 024125 98 ILVNNVG 104 (272)
Q Consensus 98 ~li~~ag 104 (272)
+||+.+.
T Consensus 68 ~VIDAtH 74 (256)
T TIGR00715 68 ILVDATH 74 (256)
T ss_pred EEEEcCC
Confidence 9999886
|
This enzyme was found to be a monomer by gel filtration. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.018 Score=48.24 Aligned_cols=103 Identities=25% Similarity=0.303 Sum_probs=65.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+++++|+|+++ +|+++++.+...|.+|+.+++++++.+.+. ++ +.... .|..+.+..+.+. ...++.
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~---~~~~~~~~~~~~~----~~~~~~ 201 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-EL---GADHV---IDYKEEDLEEELR----LTGGGG 201 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-Hh---CCcee---ccCCcCCHHHHHH----HhcCCC
Confidence 578999999999 999999988889999999999876655442 22 22111 2333322222222 111246
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
+|+++++++.. ...+..++.++ +.|+++.++....
T Consensus 202 ~d~vi~~~~~~-------------------------~~~~~~~~~l~--~~G~~v~~~~~~~ 236 (271)
T cd05188 202 ADVVIDAVGGP-------------------------ETLAQALRLLR--PGGRIVVVGGTSG 236 (271)
T ss_pred CCEEEECCCCH-------------------------HHHHHHHHhcc--cCCEEEEEccCCC
Confidence 99999998741 12233444443 3489999887654
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0035 Score=54.99 Aligned_cols=80 Identities=19% Similarity=0.283 Sum_probs=53.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.++||+|++|++|..+++.....|++|+.++++.++.+.+.+.+ +.... .|..+.++..+.+.+. .+..
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~~~---~~~g 221 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDDA---FNYKEEPDLDAALKRY---FPNG 221 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCcee---EEcCCcccHHHHHHHh---CCCC
Confidence 4789999999999999999888888999999998887766555323 22211 2222222232223322 2236
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++.+.|
T Consensus 222 vd~v~d~~g 230 (338)
T cd08295 222 IDIYFDNVG 230 (338)
T ss_pred cEEEEECCC
Confidence 999999887
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0042 Score=54.78 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|+.+||.||+||+|.+.++-....|+..+++.++.+..+ +.+. .+.+. ..|..+++-+ +++.+..+.+
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~---lGAd~---vvdy~~~~~~----e~~kk~~~~~ 225 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKK---LGADE---VVDYKDENVV----ELIKKYTGKG 225 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHH---cCCcE---eecCCCHHHH----HHHHhhcCCC
Confidence 5889999999999999999977778855555555555433 2222 23222 3466664433 3333322357
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|+|+.|.|.
T Consensus 226 ~DvVlD~vg~ 235 (347)
T KOG1198|consen 226 VDVVLDCVGG 235 (347)
T ss_pred ccEEEECCCC
Confidence 9999999995
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0064 Score=52.82 Aligned_cols=75 Identities=29% Similarity=0.400 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+.++||+|+++++|+++++.+...|++|+.+.++.++.+.+. . .+... . .|. ++..+.+. .. ..
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~~~~~-~--~~~---~~~~~~~~----~~-~~ 226 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-E---LGADY-V--IDG---SKFSEDVK----KL-GG 226 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-H---cCCcE-E--Eec---HHHHHHHH----hc-cC
Confidence 4789999999999999999999999999999988877655442 2 22211 1 122 11222222 22 36
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++++|+|.
T Consensus 227 ~d~v~~~~g~ 236 (332)
T cd08259 227 ADVVIELVGS 236 (332)
T ss_pred CCEEEECCCh
Confidence 9999999974
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0059 Score=53.20 Aligned_cols=79 Identities=16% Similarity=0.198 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.++||+|++|++|..+++.....|++|+.++++.++.+.+. ++ +.+..+ |..+.+...+.+... .++.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~l---Ga~~vi---~~~~~~~~~~~~~~~---~~~g 207 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KL---GFDVAF---NYKTVKSLEETLKKA---SPDG 207 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCCEEE---eccccccHHHHHHHh---CCCC
Confidence 4789999999999999999888788999999998887755442 22 332222 222222333333333 2235
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++.+.|
T Consensus 208 vdvv~d~~G 216 (325)
T TIGR02825 208 YDCYFDNVG 216 (325)
T ss_pred eEEEEECCC
Confidence 999999887
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0048 Score=56.08 Aligned_cols=47 Identities=23% Similarity=0.381 Sum_probs=40.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~ 61 (272)
++.+++++|.|+ |.+|+.+++.|...|. +|++++|+.++...+.+++
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~ 226 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF 226 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 478899999987 9999999999999997 8999999988877776554
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0046 Score=54.66 Aligned_cols=80 Identities=18% Similarity=0.266 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.++||+|++|++|..+++.....|++|+.++++.++.+.+.+++ +.+.. .|..+.++..+.+.+. .++.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~~~---~~~g 228 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEA---FNYKEEPDLDAALKRY---FPEG 228 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEE---EECCCcccHHHHHHHH---CCCC
Confidence 4789999999999999999888888999998888887765544333 22222 2322222232223222 2236
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++.+.|
T Consensus 229 vD~v~d~vG 237 (348)
T PLN03154 229 IDIYFDNVG 237 (348)
T ss_pred cEEEEECCC
Confidence 999999987
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.016 Score=53.52 Aligned_cols=83 Identities=16% Similarity=0.156 Sum_probs=56.5
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCC-------------CHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA-------------SPDQR 81 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~~~~ 81 (272)
+.+.+++|.|+ |.+|...++.+...|++|++++++.++++...+ .+.++ +..|.. +.+..
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~----lGa~~--v~v~~~e~g~~~~gYa~~~s~~~~ 234 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS----MGAEF--LELDFKEEGGSGDGYAKVMSEEFI 234 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeE--EeccccccccccccceeecCHHHH
Confidence 45689999996 899999999999999999999999887654432 23332 222321 12333
Q ss_pred HHHHHHHHHHcCCCccEEEECCCC
Q 024125 82 EKLIQEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 82 ~~~~~~~~~~~~~~id~li~~ag~ 105 (272)
+...+.+.++. ...|++|+++-+
T Consensus 235 ~~~~~~~~e~~-~~~DIVI~Tali 257 (511)
T TIGR00561 235 AAEMELFAAQA-KEVDIIITTALI 257 (511)
T ss_pred HHHHHHHHHHh-CCCCEEEECccc
Confidence 33444444444 579999999955
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.016 Score=46.03 Aligned_cols=77 Identities=19% Similarity=0.105 Sum_probs=54.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCe---EEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|-.|++.|. ++..+++++.+|+.++.+++..+...+.+...+.. +.++.+|..+. +.
T Consensus 23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~--- 87 (188)
T PRK14968 23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FR--- 87 (188)
T ss_pred CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------cc---
Confidence 67889988888776 56666666889999999988877776666544322 77777886431 11
Q ss_pred CCCccEEEECCCCCC
Q 024125 93 NGKLNILVNNVGTNI 107 (272)
Q Consensus 93 ~~~id~li~~ag~~~ 107 (272)
...+|.|+.|.....
T Consensus 88 ~~~~d~vi~n~p~~~ 102 (188)
T PRK14968 88 GDKFDVILFNPPYLP 102 (188)
T ss_pred ccCceEEEECCCcCC
Confidence 136899999887543
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0069 Score=52.01 Aligned_cols=80 Identities=25% Similarity=0.449 Sum_probs=54.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+++++|+|+++++|+.+++.+...|++|++++++.++.+.+ +++ +.. ...+..+.+..+++.+ ... ++.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~-~~~--~~~ 208 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKE-ATG--GRG 208 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHH-HhC--CCC
Confidence 578999999999999999999999999999999987766554 222 222 1233333333333322 211 136
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++++++|.
T Consensus 209 ~d~vi~~~g~ 218 (323)
T cd05276 209 VDVILDMVGG 218 (323)
T ss_pred eEEEEECCch
Confidence 9999999983
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0051 Score=55.75 Aligned_cols=47 Identities=28% Similarity=0.360 Sum_probs=40.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~ 61 (272)
++.+++++|.|+ |.+|+.+++.|...| .+|++++|+.++.+++.+.+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~ 224 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL 224 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 478899999997 999999999999999 58999999988877666544
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0027 Score=49.99 Aligned_cols=39 Identities=23% Similarity=0.360 Sum_probs=35.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+++||+++|.|++.-+|..+++.|.++|++|+++.|+.
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 468999999999977789999999999999999999874
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.011 Score=52.11 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=54.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---------------------HHHHHHHHHHHhC--CCeEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE---------------------VELNKCLKEWQSK--GFVVS 69 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~---------------------~~~~~~~~~~~~~--~~~~~ 69 (272)
.|+.++|+|.|+ ||+|..++..|++.|. ++.+++++. .+.+...+.+++. ..++.
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~ 99 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE 99 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence 467889999998 7999999999999999 899998763 2223333444433 33455
Q ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 70 ~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
.+..+++ .+.+.+++ ...|+||.+..
T Consensus 100 ~~~~~~~-~~~~~~~~--------~~~DlVid~~D 125 (339)
T PRK07688 100 AIVQDVT-AEELEELV--------TGVDLIIDATD 125 (339)
T ss_pred EEeccCC-HHHHHHHH--------cCCCEEEEcCC
Confidence 5555654 33333333 35788887754
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0049 Score=56.29 Aligned_cols=81 Identities=19% Similarity=0.133 Sum_probs=55.5
Q ss_pred CCCCCCEEEEeCCC----------------ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCC
Q 024125 13 WSLKGMTALVTGGT----------------RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76 (272)
Q Consensus 13 ~~l~~k~vlItGa~----------------~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~ 76 (272)
.+|+||+||||+|. |-.|.+||+++..+|++|.++.-... +. ....+..+. +
T Consensus 252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~-~p~~v~~i~--V- 319 (475)
T PRK13982 252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LA-DPQGVKVIH--V- 319 (475)
T ss_pred cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CC-CCCCceEEE--e-
Confidence 35899999999985 88999999999999999988763221 01 111233333 2
Q ss_pred CHHHHHHHHHHHHHHcCCCccEEEECCCCCCCC
Q 024125 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK 109 (272)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 109 (272)
++.+++.+.+.+.+ +.|++|++|++....
T Consensus 320 --~ta~eM~~av~~~~--~~Di~I~aAAVaDyr 348 (475)
T PRK13982 320 --ESARQMLAAVEAAL--PADIAIFAAAVADWR 348 (475)
T ss_pred --cCHHHHHHHHHhhC--CCCEEEEecccccee
Confidence 33455566665555 379999999985443
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0063 Score=52.96 Aligned_cols=72 Identities=24% Similarity=0.349 Sum_probs=53.4
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+.+++++|.|+ |.+|+.+++.|...|. +|++++|+.++..++.+++. .. ..+.++..+.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~~-------~~~~~~~~~~l-------- 236 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---GN-------AVPLDELLELL-------- 236 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---Ce-------EEeHHHHHHHH--------
Confidence 68999999987 9999999999998775 79999999988877776652 11 11223333332
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
...|++|.+.+.
T Consensus 237 ~~aDvVi~at~~ 248 (311)
T cd05213 237 NEADVVISATGA 248 (311)
T ss_pred hcCCEEEECCCC
Confidence 358999999885
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.023 Score=49.40 Aligned_cols=116 Identities=14% Similarity=0.156 Sum_probs=67.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCCh--HHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNE--VELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++|.|+|++|.+|.+++..++..|. +|++++|++ ++++....++.+. +....+... +|.++ +
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d~~~----l---- 70 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKIS--SDLSD----V---- 70 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEEC--CCHHH----h----
Confidence 4789999999999999999999986 599999954 4444333333321 111111111 12111 2
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|.++|..... ..+. ...++.|+.-...+.+.+.++ .+.+.+|++++..
T Consensus 71 ----~~aDiViitag~p~~~---~~~r---~dl~~~n~~i~~~~~~~i~~~---~~~~~viv~~npv 124 (309)
T cd05294 71 ----AGSDIVIITAGVPRKE---GMSR---LDLAKKNAKIVKKYAKQIAEF---APDTKILVVTNPV 124 (309)
T ss_pred ----CCCCEEEEecCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCch
Confidence 5799999999974221 1121 234455554444444444332 2457888888754
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0081 Score=55.76 Aligned_cols=47 Identities=23% Similarity=0.329 Sum_probs=42.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~ 61 (272)
++.+++++|.|+ |.+|+.++++|...|. +|+++.|+.++.+.+.+++
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 378999999999 9999999999999997 7999999999888877665
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0083 Score=52.14 Aligned_cols=78 Identities=19% Similarity=0.268 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.++||+|++|++|..+++.....|++|+.+++++++.+.+.+ .+.+.. .|..+.+-.+ .+.+. .++.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~----~Ga~~v---i~~~~~~~~~-~v~~~---~~~g 211 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE----LGFDAV---FNYKTVSLEE-ALKEA---APDG 211 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCEE---EeCCCccHHH-HHHHH---CCCC
Confidence 57899999999999999988888889999999988877655432 232222 2333222222 22222 2235
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++.+.|
T Consensus 212 vd~vld~~g 220 (329)
T cd08294 212 IDCYFDNVG 220 (329)
T ss_pred cEEEEECCC
Confidence 999999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0094 Score=53.30 Aligned_cols=81 Identities=16% Similarity=0.288 Sum_probs=54.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhCC--CeEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN-------------------EVELNKCLKEWQSKG--FVVSGS 71 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~ 71 (272)
.+.+++|+|.|+ ||+|.+++..|++.|. ++.+++++ ..+.+.+.+.+.+.+ .++...
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 367888999966 7999999999999998 79999886 344555555665443 334344
Q ss_pred EecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
...++ .+.+.+++ ...|+||++..
T Consensus 211 ~~~~~-~~~~~~~~--------~~~D~Vv~~~d 234 (376)
T PRK08762 211 QERVT-SDNVEALL--------QDVDVVVDGAD 234 (376)
T ss_pred eccCC-hHHHHHHH--------hCCCEEEECCC
Confidence 33333 23333333 35899998876
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0097 Score=49.26 Aligned_cols=74 Identities=23% Similarity=0.331 Sum_probs=57.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHH-HHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKL-IQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~~~~~~i 96 (272)
|.++|.|+ |-+|+.+|+.|.+.|.+|++++++++..++..++- ..+..+.+|.++++.++++ + ...
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~----~~~~~v~gd~t~~~~L~~agi--------~~a 67 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE----LDTHVVIGDATDEDVLEEAGI--------DDA 67 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh----cceEEEEecCCCHHHHHhcCC--------CcC
Confidence 34566655 68999999999999999999999999888755421 2677888999998876554 2 467
Q ss_pred cEEEECCC
Q 024125 97 NILVNNVG 104 (272)
Q Consensus 97 d~li~~ag 104 (272)
|+++-..+
T Consensus 68 D~vva~t~ 75 (225)
T COG0569 68 DAVVAATG 75 (225)
T ss_pred CEEEEeeC
Confidence 88887666
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.022 Score=51.77 Aligned_cols=114 Identities=12% Similarity=0.010 Sum_probs=74.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC-------CC--EEEEeeCChHHHHHHHHHHHhCC----CeEEEEEecCCCHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGL-------GA--VVHTCSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKL 84 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~-------G~--~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~ 84 (272)
-+|.|+|++|.+|.+++..++.. |. ++++++++++.++...-++++.. .++. +.. .+.+++
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye~~--- 174 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYEVF--- 174 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHHHh---
Confidence 46899999999999999999987 65 79999999999887776665432 1221 111 122221
Q ss_pred HHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc--CCCCeEEEecCCC
Q 024125 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA--SGVGSIVFISSVG 156 (272)
Q Consensus 85 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~g~ii~vsS~~ 156 (272)
...|++|..||.... + ..+ -.+.++.|+. +.+.+.+.+.+ .+.+.||.+|-..
T Consensus 175 ---------kdaDiVVitAG~prk-p--G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsNPv 229 (444)
T PLN00112 175 ---------QDAEWALLIGAKPRG-P--GME---RADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGNPC 229 (444)
T ss_pred ---------CcCCEEEECCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCCcH
Confidence 579999999997322 1 112 2345555644 44555555565 3557888887543
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0099 Score=53.12 Aligned_cols=102 Identities=12% Similarity=-0.023 Sum_probs=61.6
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
-+.++|.|.||||.+|+++.+.|.++ ..+|..+.++....+...... .. ....|+.+.++++.. . +
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~----~~--l~~~~~~~~~~~~~~--~----~- 102 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVF----PH--LITQDLPNLVAVKDA--D----F- 102 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhC----cc--ccCccccceecCCHH--H----h-
Confidence 35568999999999999999999999 558888777544322211111 01 111233222222211 1 2
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
..+|+++.+.+.. ..+.++|.|. . +.+||-+|+..-
T Consensus 103 ~~~DvVf~Alp~~--------------------------~s~~i~~~~~-~-g~~VIDlSs~fR 138 (381)
T PLN02968 103 SDVDAVFCCLPHG--------------------------TTQEIIKALP-K-DLKIVDLSADFR 138 (381)
T ss_pred cCCCEEEEcCCHH--------------------------HHHHHHHHHh-C-CCEEEEcCchhc
Confidence 3589999987631 3456666664 2 257888887553
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.032 Score=48.47 Aligned_cols=117 Identities=14% Similarity=0.058 Sum_probs=68.4
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|.|+|++|.+|.+++..++.++. ++++++.+ ..+...-++.+.........+. .+ +++ .+. + ...
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~~---y~~----~-~da 69 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EEL---KKA----L-KGA 69 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cch---HHh----c-CCC
Confidence 688999999999999999998884 79999987 3332223333221111111110 00 001 111 1 579
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
|++|.+||.... + ..+ =.+.++.|..-...+.+.+.++ .+.+.+|++|.+.
T Consensus 70 DivvitaG~~~k-~--g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv 120 (310)
T cd01337 70 DVVVIPAGVPRK-P--GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISNPV 120 (310)
T ss_pred CEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence 999999997422 1 112 2456666765555555544332 3457888888766
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.002 Score=42.98 Aligned_cols=35 Identities=31% Similarity=0.450 Sum_probs=23.9
Q ss_pred CCC-CEEEEeCCCChHHHH--HHHHHHHCCCEEEEeeCC
Q 024125 15 LKG-MTALVTGGTRGIGQA--TVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 15 l~~-k~vlItGa~~giG~~--ia~~l~~~G~~v~~~~r~ 50 (272)
++| |+|||+|+|+|.|++ |+..| ..|++.+.+...
T Consensus 36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE 73 (78)
T PF12242_consen 36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE 73 (78)
T ss_dssp -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence 345 899999999999999 77766 678887777643
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.018 Score=48.37 Aligned_cols=81 Identities=17% Similarity=0.229 Sum_probs=52.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhCC--CeEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSKG--FVVSGS 71 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~ 71 (272)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+. .+.+..++.+.+.+ .++..+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~ 107 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI 107 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 467899999998 9999999999999998 788876532 22333444444433 344444
Q ss_pred EecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
...++ .+...+++ ...|+||.|..
T Consensus 108 ~~~i~-~~~~~~~~--------~~~DiVi~~~D 131 (245)
T PRK05690 108 NARLD-DDELAALI--------AGHDLVLDCTD 131 (245)
T ss_pred eccCC-HHHHHHHH--------hcCCEEEecCC
Confidence 44443 22333333 46888888764
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.01 Score=51.70 Aligned_cols=73 Identities=25% Similarity=0.338 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|+|+|.+ |+|...++.....|++|+.++|++++.+..++. +.+.. .+-++.+..+.+- +.
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd~~---i~~~~~~~~~~~~--------~~ 229 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GADHV---INSSDSDALEAVK--------EI 229 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCcEE---EEcCCchhhHHhH--------hh
Confidence 48999999999 999988887777999999999999887655433 23332 2333444433333 23
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
.|++|.+++
T Consensus 230 ~d~ii~tv~ 238 (339)
T COG1064 230 ADAIIDTVG 238 (339)
T ss_pred CcEEEECCC
Confidence 899999887
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.02 Score=46.98 Aligned_cols=36 Identities=22% Similarity=0.307 Sum_probs=31.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~ 50 (272)
.|++++|+|.|+ ||+|.++++.|++.|. ++.+++.+
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 367889999996 8999999999999998 68888876
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.007 Score=51.83 Aligned_cols=38 Identities=26% Similarity=0.369 Sum_probs=34.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
.+++||+++|.|.++-.|+.++..|+++|++|.++.|.
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46899999999999999999999999999999988774
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.01 Score=54.36 Aligned_cols=59 Identities=24% Similarity=0.329 Sum_probs=44.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQRE 82 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 82 (272)
++++|.|+ |.+|+++++.|.++|..|++++++.+..+.+.+.. .+.++..|.++.+.++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~ 59 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----DVRTVVGNGSSPDVLR 59 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----CEEEEEeCCCCHHHHH
Confidence 36888887 99999999999999999999999988776654311 2444556666655443
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.055 Score=47.71 Aligned_cols=41 Identities=27% Similarity=0.393 Sum_probs=36.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~ 57 (272)
.|++|+|.|+ |++|..+++.....|++|+.+++++++.+..
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 4889999999 9999999998888899999999988876644
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.021 Score=51.22 Aligned_cols=47 Identities=23% Similarity=0.309 Sum_probs=42.5
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQ 62 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~ 62 (272)
|.++++||.|+ |-+|.-++++|+++|. +|+++.|+.++.+++.+++.
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~ 223 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG 223 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence 89999999998 5799999999999995 89999999999999888764
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0059 Score=56.30 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=41.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 61 (272)
.++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus 328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 3578999999996 79999999999999999999999988877766543
|
|
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.048 Score=43.33 Aligned_cols=119 Identities=21% Similarity=0.163 Sum_probs=82.8
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.-+|+||+|+=.|++.|+ .+++.. -.|+ .|+.++.+.+.++...+...+...++.++.+|+++..
T Consensus 41 ~g~l~g~~V~DlG~GTG~-La~ga~--~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~----------- 106 (198)
T COG2263 41 RGDLEGKTVLDLGAGTGI-LAIGAA--LLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR----------- 106 (198)
T ss_pred cCCcCCCEEEEcCCCcCH-HHHHHH--hcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC-----------
Confidence 346899999988988776 233333 3565 8999999999999888888887788999999987653
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
++.|++|.|+-.... ....+..-+++-+++. ...|+.=
T Consensus 107 ---~~~dtvimNPPFG~~--~rhaDr~Fl~~Ale~s-------------------------------------~vVYsiH 144 (198)
T COG2263 107 ---GKFDTVIMNPPFGSQ--RRHADRPFLLKALEIS-------------------------------------DVVYSIH 144 (198)
T ss_pred ---CccceEEECCCCccc--cccCCHHHHHHHHHhh-------------------------------------heEEEee
Confidence 689999999965333 2223443333322221 2346667
Q ss_pred HHHHHHHHHHHHHHHc
Q 024125 171 KAAMNQLTRNLACEWA 186 (272)
Q Consensus 171 K~a~~~~~~~la~el~ 186 (272)
|++-..|.+..+.+++
T Consensus 145 ~a~~~~f~~~~~~~~G 160 (198)
T COG2263 145 KAGSRDFVEKFAADLG 160 (198)
T ss_pred ccccHHHHHHHHHhcC
Confidence 7777788888877764
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.014 Score=49.51 Aligned_cols=113 Identities=13% Similarity=0.127 Sum_probs=68.7
Q ss_pred EEEeCCCChHHHHHHHHHHHCC----CEEEEeeCChHHHHHHHHHHHhCCCe---EEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 20 ALVTGGTRGIGQATVEELAGLG----AVVHTCSRNEVELNKCLKEWQSKGFV---VSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+.|.|++|.+|..++..|+..| .+|+++++++++++....++++.... ..+.. .+|. .+.+
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~--~~d~---~~~~------- 68 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI--TDDP---YEAF------- 68 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE--CCch---HHHh-------
Confidence 4689998899999999999999 68999999988877766666543111 11111 1121 1112
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSV 155 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~ 155 (272)
...|++|..+|...... .+. ...+..|+ .+.+.+.+.+++. +.+.++++|-+
T Consensus 69 -~~aDiVv~t~~~~~~~g---~~r---~~~~~~n~----~i~~~i~~~i~~~~p~a~~i~~tNP 121 (263)
T cd00650 69 -KDADVVIITAGVGRKPG---MGR---LDLLKRNV----PIVKEIGDNIEKYSPDAWIIVVSNP 121 (263)
T ss_pred -CCCCEEEECCCCCCCcC---CCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCc
Confidence 46999999998743221 111 12223333 3445555555543 45777887643
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.059 Score=46.89 Aligned_cols=114 Identities=12% Similarity=0.054 Sum_probs=71.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+|.|+|+ |.+|.+++..++..|. ++++++.+++.++....++.... ....+.. ..|.++ +
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~~----~------- 69 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYSV----T------- 69 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHHH----h-------
Confidence 47899996 9999999999998875 79999998877766666665432 1111111 122221 1
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
...|++|.+||.... + ..+. ...+..|..= .+.+.+.+.+. +.+.++++|...
T Consensus 70 -~~adivvitaG~~~k-~--g~~R---~dll~~N~~i----~~~~~~~i~~~~p~~~vivvsNP~ 123 (312)
T cd05293 70 -ANSKVVIVTAGARQN-E--GESR---LDLVQRNVDI----FKGIIPKLVKYSPNAILLVVSNPV 123 (312)
T ss_pred -CCCCEEEECCCCCCC-C--CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCcEEEEccChH
Confidence 468999999997433 1 1222 2344555443 44555555544 457888888644
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.1 Score=45.36 Aligned_cols=111 Identities=12% Similarity=0.097 Sum_probs=67.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++.|.|+ |.+|..++..|+.+| .+|+++++++++.+....++.... ..... .. .+.++ +
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i-~~--~d~~~-------l----- 65 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRI-YA--GDYAD-------C----- 65 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEE-ee--CCHHH-------h-----
Confidence 5889998 899999999999999 589999999887764444444221 11111 11 12221 1
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSV 155 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~ 155 (272)
...|++|.+++...... ++..+.+..|+.-. +.+.+.+.+. +.|.+++++..
T Consensus 66 ~~aDiViita~~~~~~~------~~r~dl~~~n~~i~----~~~~~~l~~~~~~giiiv~tNP 118 (308)
T cd05292 66 KGADVVVITAGANQKPG------ETRLDLLKRNVAIF----KEIIPQILKYAPDAILLVVTNP 118 (308)
T ss_pred CCCCEEEEccCCCCCCC------CCHHHHHHHHHHHH----HHHHHHHHHHCCCeEEEEecCc
Confidence 47899999999743211 12233444454433 4444444443 44777777653
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.041 Score=47.84 Aligned_cols=117 Identities=13% Similarity=0.068 Sum_probs=66.9
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|.|+|++|.+|.+++..++.++. ++++++.++ .+....++.+.........+.-.+ +. . +.+ ...
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~~--~~---~----~~~-~da 68 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGEE--GL---E----NAL-KGA 68 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCCC--ch---H----HHc-CCC
Confidence 478999999999999999998875 799999876 221111222211111111100000 01 1 112 579
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCC
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGG 157 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~ 157 (272)
|++|.+||.... + ..+ -.+.+..|+. +.+.+.+.+.+. +.+.+|++|.+..
T Consensus 69 DivvitaG~~~~-~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvD 120 (312)
T TIGR01772 69 DVVVIPAGVPRK-P--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVN 120 (312)
T ss_pred CEEEEeCCCCCC-C--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchh
Confidence 999999997422 1 112 2345666665 445555555544 4578888887664
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.028 Score=49.84 Aligned_cols=36 Identities=28% Similarity=0.405 Sum_probs=31.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~ 50 (272)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D 61 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD 61 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 367899999988 7999999999999998 78888764
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.03 Score=46.39 Aligned_cols=81 Identities=17% Similarity=0.289 Sum_probs=53.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhCC--CeEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN-------------------EVELNKCLKEWQSKG--FVVSGS 71 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~ 71 (272)
.|++++|+|.| .||+|.++++.|++.|. ++.++|.+ ..+.+.+.+.+++.+ .++..+
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 46788999998 57999999999999998 77777542 233444555555443 344444
Q ss_pred EecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
..+++ .+.+.+++ ...|+||.|..
T Consensus 97 ~~~i~-~~~~~~~~--------~~~DvVi~~~d 120 (228)
T cd00757 97 NERLD-AENAEELI--------AGYDLVLDCTD 120 (228)
T ss_pred cceeC-HHHHHHHH--------hCCCEEEEcCC
Confidence 44443 33333333 35899998876
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.017 Score=42.24 Aligned_cols=71 Identities=24% Similarity=0.257 Sum_probs=52.7
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 99 (272)
++|.|. +.+|+.+++.|.+.+.+|++++++++..+++.++ + +.++..|.++++.++++- . .+.+.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~----~--~~~i~gd~~~~~~l~~a~------i-~~a~~v 66 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE----G--VEVIYGDATDPEVLERAG------I-EKADAV 66 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT----T--SEEEES-TTSHHHHHHTT------G-GCESEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc----c--cccccccchhhhHHhhcC------c-cccCEE
Confidence 466776 5899999999999777999999999886655432 2 567889999998766552 1 467888
Q ss_pred EECCC
Q 024125 100 VNNVG 104 (272)
Q Consensus 100 i~~ag 104 (272)
+....
T Consensus 67 v~~~~ 71 (116)
T PF02254_consen 67 VILTD 71 (116)
T ss_dssp EEESS
T ss_pred EEccC
Confidence 87665
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.02 Score=52.37 Aligned_cols=79 Identities=16% Similarity=0.046 Sum_probs=51.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++.+|+++|+|.+ +.|.++++.|+++|+.|.+.+...... ..++++.....+.+..... +.. .+
T Consensus 1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~-~~~----~~------- 65 (445)
T PRK04308 1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRL-KDA----LD------- 65 (445)
T ss_pred CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCC-CHH----HH-------
Confidence 35678999999986 999999999999999999998765421 1222332111222222221 111 11
Q ss_pred CCCccEEEECCCCCC
Q 024125 93 NGKLNILVNNVGTNI 107 (272)
Q Consensus 93 ~~~id~li~~ag~~~ 107 (272)
...|.||..+|+.+
T Consensus 66 -~~~d~vv~spgi~~ 79 (445)
T PRK04308 66 -NGFDILALSPGISE 79 (445)
T ss_pred -hCCCEEEECCCCCC
Confidence 35899999999853
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.039 Score=43.77 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=27.5
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE 51 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~ 51 (272)
+|+|.|+ ||+|.++++.|++.|. ++.+++.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3678885 8999999999999998 699998764
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.018 Score=49.58 Aligned_cols=79 Identities=23% Similarity=0.404 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+++++|+|+++++|.++++.+...|++|+.+.+++++.+.. .++ +.+.. .+....+....+.. ... +..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~~~~~-~~~--~~~ 208 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GADIA---INYREEDFVEVVKA-ETG--GKG 208 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcEE---EecCchhHHHHHHH-HcC--CCC
Confidence 578999999999999999999999999999999887765533 222 22211 22333332222222 211 135
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++++++|
T Consensus 209 ~d~~i~~~~ 217 (325)
T TIGR02824 209 VDVILDIVG 217 (325)
T ss_pred eEEEEECCc
Confidence 999999987
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.055 Score=47.29 Aligned_cols=113 Identities=14% Similarity=0.089 Sum_probs=67.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCCh--HHHHHHHHHHHhCC-C---eEEEEEecCCCHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNE--VELNKCLKEWQSKG-F---VVSGSVCDAASPDQREKL 84 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~-~---~~~~~~~D~~~~~~~~~~ 84 (272)
-+|.|+|++|.+|.+++..++.+|. ++++++.++ +.++....++.+.. . .+. +.. .+.+
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~~--~~~~----- 75 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-ATT--DPEE----- 75 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Eec--ChHH-----
Confidence 3689999999999999999998874 799999865 33444444444321 0 111 111 1111
Q ss_pred HHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-C-CCeEEEecCC
Q 024125 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-G-VGSIVFISSV 155 (272)
Q Consensus 85 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~-~g~ii~vsS~ 155 (272)
. + ...|+||.+||.... + . ++-.+.++.|+.-. +.+.+.+.+. + .+.++++|..
T Consensus 76 --~----~-~daDvVVitAG~~~k-~--g---~tR~dll~~Na~i~----~~i~~~i~~~~~~~~iiivvsNP 131 (323)
T TIGR01759 76 --A----F-KDVDAALLVGAFPRK-P--G---MERADLLSKNGKIF----KEQGKALNKVAKKDVKVLVVGNP 131 (323)
T ss_pred --H----h-CCCCEEEEeCCCCCC-C--C---CcHHHHHHHHHHHH----HHHHHHHHhhCCCCeEEEEeCCc
Confidence 1 1 478999999997422 1 1 12234555665444 5555555554 2 5677777753
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.15 Score=44.60 Aligned_cols=122 Identities=11% Similarity=0.009 Sum_probs=71.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHh----CCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQS----KGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+..++|.|.|+ |.+|..++..++.+|. +|++++.+++......-++.. .+....+.. .+|.++ +
T Consensus 4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~----l---- 72 (321)
T PTZ00082 4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED----I---- 72 (321)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH----h----
Confidence 34578999995 8899999999999995 899999988764322211111 111222221 122221 1
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
...|+||.++|........+.+++. .+.+..|+ .+.+.+.+.+.+. +.+.++++|.+.
T Consensus 73 ----~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~ 131 (321)
T PTZ00082 73 ----AGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPL 131 (321)
T ss_pred ----CCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence 4689999999974332211222122 33444454 3456666666654 345788887654
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.023 Score=49.35 Aligned_cols=79 Identities=24% Similarity=0.326 Sum_probs=53.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+.++||+|+++++|.++++.+.+.|++|+.++++.++.+.+.+.+ +..- ..|..+.+..+++. +. .++.
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~v~-~~---~~~~ 214 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFDA---AINYKTPDLAEALK-EA---APDG 214 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCce---EEecCChhHHHHHH-Hh---ccCC
Confidence 4789999999999999999999999999999998887766554322 2111 12233332222222 22 2246
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++++.|
T Consensus 215 ~d~vi~~~g 223 (329)
T cd05288 215 IDVYFDNVG 223 (329)
T ss_pred ceEEEEcch
Confidence 999999987
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.033 Score=43.57 Aligned_cols=86 Identities=14% Similarity=0.079 Sum_probs=56.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH-------HhCCCeEEEEEecCCCHHHHHHHHHH--H
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW-------QSKGFVVSGSVCDAASPDQREKLIQE--V 88 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~--~ 88 (272)
++|-+.|- |-+|+.+++.|+++|++|.+.+|++++.+++.++- .+.-.....+..-+.+.+++++++.. +
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 45667776 79999999999999999999999998887766431 00001123344557788888888887 6
Q ss_pred HHHcCCCccEEEECCCC
Q 024125 89 GSKFNGKLNILVNNVGT 105 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~ 105 (272)
.... .+=.++|++...
T Consensus 81 ~~~l-~~g~iiid~sT~ 96 (163)
T PF03446_consen 81 LAGL-RPGKIIIDMSTI 96 (163)
T ss_dssp GGGS--TTEEEEE-SS-
T ss_pred hhcc-ccceEEEecCCc
Confidence 6554 345677766654
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.019 Score=57.31 Aligned_cols=77 Identities=13% Similarity=0.190 Sum_probs=60.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CE-------------EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLG-AV-------------VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 81 (272)
..|+|+|.|+ |.+|+..++.|++.. +. |.+++++.+..+++.+.+. .+..++.|++|.+++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~----~~~~v~lDv~D~e~L 642 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE----NAEAVQLDVSDSESL 642 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC----CCceEEeecCCHHHH
Confidence 4678999997 999999999998863 23 8888999888776665432 355678999999887
Q ss_pred HHHHHHHHHHcCCCccEEEECCCC
Q 024125 82 EKLIQEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 82 ~~~~~~~~~~~~~~id~li~~ag~ 105 (272)
.+++ ..+|+||++...
T Consensus 643 ~~~v--------~~~DaVIsalP~ 658 (1042)
T PLN02819 643 LKYV--------SQVDVVISLLPA 658 (1042)
T ss_pred HHhh--------cCCCEEEECCCc
Confidence 6666 359999998864
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.036 Score=50.57 Aligned_cols=41 Identities=24% Similarity=0.274 Sum_probs=35.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
+++.|.||+|.+|.++++.|.+.|.+|.+++|+.+...+..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a 41 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA 41 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence 36899999999999999999999999999999887654443
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.047 Score=44.31 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=32.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~ 50 (272)
.|+.++|+|.|+ ||+|..++..|++.|. ++++++++
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 367889999998 7899999999999999 79999876
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.045 Score=41.25 Aligned_cols=79 Identities=19% Similarity=0.179 Sum_probs=54.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCH-----------------
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP----------------- 78 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----------------- 78 (272)
+++++++.|.+ .|.++|..|.+.|.+|+.++.+++..+...+. .+.++..|+.++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~~~~y~~a~liysirpp 87 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPNLEIYKNAKLIYSIRPP 87 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCCHHHHhcCCEEEEeCCC
Confidence 46789999998 78888999999999999999999876555433 244556666653
Q ss_pred HHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 79 DQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
.+++.-+-++.++. ..|.+|..-+
T Consensus 88 ~el~~~~~~la~~~--~~~~~i~~l~ 111 (134)
T PRK04148 88 RDLQPFILELAKKI--NVPLIIKPLS 111 (134)
T ss_pred HHHHHHHHHHHHHc--CCCEEEEcCC
Confidence 35555555555554 4666665443
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.14 Score=45.36 Aligned_cols=114 Identities=12% Similarity=0.091 Sum_probs=71.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++|.|+|+ |.+|.+++..++.++. ++++++.+++.++....++.+.. .... +.. -.+.++ +
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~-~~dy~~-------~---- 103 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILA-STDYAV-------T---- 103 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEe-CCCHHH-------h----
Confidence 69999996 9999999999998875 79999998887766666655431 1111 111 112221 1
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
...|++|.+||..... ..+. .+.+..|+. +.+.+.+.+.+. +.+.+|++|-..
T Consensus 104 -~daDiVVitAG~~~k~---g~tR---~dll~~N~~----I~~~i~~~I~~~~p~~ivivvtNPv 157 (350)
T PLN02602 104 -AGSDLCIVTAGARQIP---GESR---LNLLQRNVA----LFRKIIPELAKYSPDTILLIVSNPV 157 (350)
T ss_pred -CCCCEEEECCCCCCCc---CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCch
Confidence 4799999999974221 1122 234444543 345555555544 457888888544
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.068 Score=47.79 Aligned_cols=114 Identities=12% Similarity=-0.006 Sum_probs=70.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-E----EEE----eeCChHHHHHHHHHHHhCC----CeEEEEEecCCCHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-V----VHT----CSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKL 84 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-~----v~~----~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~ 84 (272)
-+|.|+|++|.+|.+++..++..|. . +.+ +++++++++...-++.+.. .++. +.. .+.+++
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~y~~~--- 118 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DPYEVF--- 118 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CCHHHh---
Confidence 4799999999999999999998874 3 333 4888888877766665431 1111 111 122221
Q ss_pred HHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-C-CCCeEEEecCCC
Q 024125 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-S-GVGSIVFISSVG 156 (272)
Q Consensus 85 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~-~~g~ii~vsS~~ 156 (272)
...|++|..||.... + ..+ -.+.++.|+.= .+.+.+.+.+ . +.++||.+|-+.
T Consensus 119 ---------kdaDIVVitAG~prk-p--g~t---R~dll~~N~~I----~k~i~~~I~~~a~~~~iviVVsNPv 173 (387)
T TIGR01757 119 ---------EDADWALLIGAKPRG-P--GME---RADLLDINGQI----FADQGKALNAVASKNCKVLVVGNPC 173 (387)
T ss_pred ---------CCCCEEEECCCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEcCCcH
Confidence 579999999997322 1 112 23455555444 4555555555 3 457788887543
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.029 Score=48.35 Aligned_cols=79 Identities=16% Similarity=0.268 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+++++|+|+++++|+++++.+...|++++.++++.++.+.+ .++ +... . .|....+..+.+. +... +..
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~~-~~~~--~~~ 213 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAAH-V--IVTDEEDLVAEVL-RITG--GKG 213 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCCE-E--EecCCccHHHHHH-HHhC--CCC
Confidence 578999999999999999999999999999999887765544 222 2211 1 1222222222222 2211 125
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++++++
T Consensus 214 ~d~vi~~~~ 222 (328)
T cd08268 214 VDVVFDPVG 222 (328)
T ss_pred ceEEEECCc
Confidence 999999987
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.056 Score=40.27 Aligned_cols=76 Identities=18% Similarity=0.255 Sum_probs=53.3
Q ss_pred EEEEeCCCChHHHHHHHHHHH-CCCEE-EEeeCCh----------------------HHHHHHHHHHHhCCCeEEEEEec
Q 024125 19 TALVTGGTRGIGQATVEELAG-LGAVV-HTCSRNE----------------------VELNKCLKEWQSKGFVVSGSVCD 74 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~-~G~~v-~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~D 74 (272)
+|.|.|++|.+|+.+++.+.+ .+.++ ..++|+. ..+++..++ .+ +-.|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID 73 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID 73 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence 689999999999999999999 56665 4556665 223333332 23 3468
Q ss_pred CCCHHHHHHHHHHHHHHcCCCccEEEECCCC
Q 024125 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~id~li~~ag~ 105 (272)
.|.++.+...++.+.++ ++.+|+-..|.
T Consensus 74 fT~p~~~~~~~~~~~~~---g~~~ViGTTG~ 101 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKH---GVPLVIGTTGF 101 (124)
T ss_dssp ES-HHHHHHHHHHHHHH---T-EEEEE-SSS
T ss_pred cCChHHhHHHHHHHHhC---CCCEEEECCCC
Confidence 89999999988888765 58888888874
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.03 Score=49.31 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=50.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++... ++ +.... .|..+. ++.+.. +.. +
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~-~~~~~~----~~~-g 234 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM---GADKL---VNPQND-DLDHYK----AEK-G 234 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc---CCcEE---ecCCcc-cHHHHh----ccC-C
Confidence 5889999986 8999999988888898 6888999887765443 22 33322 233322 222222 222 4
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.++|.
T Consensus 235 ~~D~vid~~G~ 245 (343)
T PRK09880 235 YFDVSFEVSGH 245 (343)
T ss_pred CCCEEEECCCC
Confidence 69999999983
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.053 Score=45.34 Aligned_cols=37 Identities=27% Similarity=0.348 Sum_probs=31.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE 51 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~ 51 (272)
.|++++|+|.|+ ||+|..++..|++.|. ++.+++.+.
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 467888999986 6999999999999998 788887643
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.061 Score=48.52 Aligned_cols=44 Identities=23% Similarity=0.319 Sum_probs=37.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
.+.|++|+|.|++ .||+.+++.+...|++|+++++++.+++...
T Consensus 199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~ 242 (413)
T cd00401 199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQAA 242 (413)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHHH
Confidence 4689999999986 7999999999999999999999887765443
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.05 Score=41.09 Aligned_cols=78 Identities=17% Similarity=0.261 Sum_probs=53.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhC--CCeEEEEEec
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSK--GFVVSGSVCD 74 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D 74 (272)
+++|+|.|+ |++|..+++.|++.|. ++.+++.+. .+.+.+++.+.+. ..++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 578888886 6999999999999998 788887521 2334455555543 4567777777
Q ss_pred CCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
+ +.+...+++ ...|++|.|..
T Consensus 81 ~-~~~~~~~~~--------~~~d~vi~~~d 101 (135)
T PF00899_consen 81 I-DEENIEELL--------KDYDIVIDCVD 101 (135)
T ss_dssp C-SHHHHHHHH--------HTSSEEEEESS
T ss_pred c-ccccccccc--------cCCCEEEEecC
Confidence 7 344454445 25799998865
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0015 Score=47.15 Aligned_cols=38 Identities=32% Similarity=0.355 Sum_probs=32.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
++++||+|||.|+ |.+|..=++.|++.|++|.+++...
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 4789999999999 8999999999999999999999875
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.044 Score=47.96 Aligned_cols=115 Identities=11% Similarity=0.055 Sum_probs=67.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCChH--HHHHHHHHHHhCC----CeEEEEEecCCCHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEV--ELNKCLKEWQSKG----FVVSGSVCDAASPDQREK 83 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~-------~v~~~~r~~~--~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~ 83 (272)
.++|.|+|++|.+|.+++..++..|. ++++++.++. +++....++.+.. ..+.. .. .+.+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~y~---- 76 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DPNV---- 76 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--ChHH----
Confidence 35899999999999999999988664 6999998543 2333333332211 11111 11 1111
Q ss_pred HHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-C-CCCeEEEecCCC
Q 024125 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-S-GVGSIVFISSVG 156 (272)
Q Consensus 84 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~-~~g~ii~vsS~~ 156 (272)
.+ ...|++|.+||.... + ..+ -.+.++.|+. +.+.+.+.+.+ . +.+.+|++|.+.
T Consensus 77 -------~~-~daDiVVitaG~~~k-~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsNPv 133 (326)
T PRK05442 77 -------AF-KDADVALLVGARPRG-P--GME---RKDLLEANGA----IFTAQGKALNEVAARDVKVLVVGNPA 133 (326)
T ss_pred -------Hh-CCCCEEEEeCCCCCC-C--CCc---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 11 478999999997322 1 112 2345555543 45666666666 3 357888887543
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.058 Score=47.11 Aligned_cols=116 Identities=12% Similarity=0.068 Sum_probs=70.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
..++|.|+|+ |.+|..++..++..| .++++++.+++..+...-++... +..... .. .+|.++ +
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i-~~-~~d~~~----l----- 71 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINI-LG-TNNYED----I----- 71 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEE-Ee-CCCHHH----h-----
Confidence 4578999997 889999999999998 68999999876654332222221 111111 11 122221 1
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
...|+||.++|..... ..+. ...+..|. .+.+.+.+.+.+. +.+.+|++|.+.
T Consensus 72 ---~~ADiVVitag~~~~~---g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~ 125 (319)
T PTZ00117 72 ---KDSDVVVITAGVQRKE---EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL 125 (319)
T ss_pred ---CCCCEEEECCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence 4689999999863221 1222 34555565 3455666666554 346688887644
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.039 Score=51.03 Aligned_cols=79 Identities=19% Similarity=0.182 Sum_probs=54.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|+|+|.|+ |++|.++|+.|.++|++|.+++++.+ ......+.+++.+..+.. .+-.. . .
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~--~~~~~------~-------~ 76 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRL--GPGPT------L-------P 76 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEE--CCCcc------c-------c
Confidence 467899999997 77999999999999999999986543 334444556665544432 11110 0 1
Q ss_pred CCCccEEEECCCCCCCC
Q 024125 93 NGKLNILVNNVGTNIRK 109 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~ 109 (272)
...|.||..+|+.+..
T Consensus 77 -~~~D~Vv~s~Gi~~~~ 92 (480)
T PRK01438 77 -EDTDLVVTSPGWRPDA 92 (480)
T ss_pred -CCCCEEEECCCcCCCC
Confidence 3589999999975433
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.039 Score=44.69 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=29.6
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~ 50 (272)
|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 67889999985 5599999999999998 68888754
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.033 Score=48.21 Aligned_cols=80 Identities=14% Similarity=0.203 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.++||.|+++.+|.++++.....|+.++.+.++.++.+.+.+ + +.... + +..+. +..+.+.+.... .+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~~~-~--~~~~~-~~~~~i~~~~~~--~~ 208 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIGPV-V--STEQP-GWQDKVREAAGG--AP 208 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCCEE-E--cCCCc-hHHHHHHHHhCC--CC
Confidence 47899999999999999999888899999999888776555542 2 22211 1 22222 222222222211 25
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|+++.+.|.
T Consensus 209 ~d~v~d~~g~ 218 (324)
T cd08292 209 ISVALDSVGG 218 (324)
T ss_pred CcEEEECCCC
Confidence 9999999883
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.032 Score=47.96 Aligned_cols=71 Identities=21% Similarity=0.284 Sum_probs=50.1
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCC-CHHHHHHHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA-SPDQREKLIQ 86 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~ 86 (272)
++.+.+. .|+++-|+|++| ||.--++.-...|++|+..++...+-++..+.+ +.+.+ .|.+ |++.++++.+
T Consensus 174 Lk~~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~f---v~~~~d~d~~~~~~~ 245 (360)
T KOG0023|consen 174 LKRSGLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADVF---VDSTEDPDIMKAIMK 245 (360)
T ss_pred hHHcCCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---Cccee---EEecCCHHHHHHHHH
Confidence 3444455 799999999998 997777666667999999999887766666544 44544 3455 5666665554
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.033 Score=50.96 Aligned_cols=78 Identities=14% Similarity=0.075 Sum_probs=60.0
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
...+.++|.|+ |.+|+++++.|.++|.+|++++++++..+++.++. ..+.++..|.++.+.++++- . .
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~----~~~~~i~gd~~~~~~L~~~~------~-~ 296 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL----PNTLVLHGDGTDQELLEEEG------I-D 296 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC----CCCeEEECCCCCHHHHHhcC------C-c
Confidence 55788999999 99999999999999999999999988776655432 24556788999887654432 1 4
Q ss_pred CccEEEECCC
Q 024125 95 KLNILVNNVG 104 (272)
Q Consensus 95 ~id~li~~ag 104 (272)
..|.+|.+..
T Consensus 297 ~a~~vi~~~~ 306 (453)
T PRK09496 297 EADAFIALTN 306 (453)
T ss_pred cCCEEEECCC
Confidence 6788876554
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.018 Score=49.24 Aligned_cols=40 Identities=25% Similarity=0.270 Sum_probs=36.2
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
..+++||+++|+|.+.-+|+-++..|.++|++|.++.++.
T Consensus 153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t 192 (286)
T PRK14175 153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS 192 (286)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 3479999999999999999999999999999999988653
|
|
| >COG3007 Uncharacterized paraquat-inducible protein B [Function unknown] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.73 Score=39.23 Aligned_cols=175 Identities=18% Similarity=0.165 Sum_probs=101.1
Q ss_pred CCCEEEEeCCCChHHHH--HHHHHHHCCCEEEEee--C-----ChHH-----HHHHHHHHHhCCCeEEEEEecCCCHHHH
Q 024125 16 KGMTALVTGGTRGIGQA--TVEELAGLGAVVHTCS--R-----NEVE-----LNKCLKEWQSKGFVVSGSVCDAASPDQR 81 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~--ia~~l~~~G~~v~~~~--r-----~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 81 (272)
-.|+|||.|+++|-|.+ |+..|. .|++-+.+. | ++-. ...+.+...+.+.-..-+..|.=+.+--
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k 118 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMK 118 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHH
Confidence 45899999999999986 455554 566544332 2 1100 1122333334454555667888888888
Q ss_pred HHHHHHHHHHcCCCccEEEECCCCCCCC-C---------------------------------CCCCCHHHHHHHHHHHh
Q 024125 82 EKLIQEVGSKFNGKLNILVNNVGTNIRK-P---------------------------------TIEYSAEEYSKIMTTNF 127 (272)
Q Consensus 82 ~~~~~~~~~~~~~~id~li~~ag~~~~~-~---------------------------------~~~~~~~~~~~~~~~N~ 127 (272)
+.+++.+++.+ +++|.+|+.-+...+. | ++..+.++++.+..+
T Consensus 119 ~kvIe~Ik~~~-g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~V-- 195 (398)
T COG3007 119 QKVIEAIKQDF-GKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAV-- 195 (398)
T ss_pred HHHHHHHHHhh-ccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHh--
Confidence 88999999999 6999988755431111 0 001134455554443
Q ss_pred HHHH---HHHHHHHHHHHcCCCCeEEEecCCCC--CCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEE
Q 024125 128 ESTY---HLCQLVYPLLKASGVGSIVFISSVGG--LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194 (272)
Q Consensus 128 ~~~~---~l~~~~~~~~~~~~~g~ii~vsS~~~--~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~ 194 (272)
+|-- .++.+++..---..+.+-+..|-+.. ..+.....+.+.+|.=++.-+..+...|+..+=..+.
T Consensus 196 MGGeDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~v 267 (398)
T COG3007 196 MGGEDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARV 267 (398)
T ss_pred hCcchHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeee
Confidence 2221 23444433222222234343333222 2455566889999999999999999999877534433
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.036 Score=48.50 Aligned_cols=78 Identities=21% Similarity=0.241 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.++||+|+ |++|..+++.+...|++ |+.+++++++.+.. +++ +.... .|..+.+ .+++. ++.. +.
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~-~~~~~-~~~~--~~ 230 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADFV---INSGQDD-VQEIR-ELTS--GA 230 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCEE---EcCCcch-HHHHH-HHhC--CC
Confidence 4889999986 89999999988888998 99998888776544 333 22221 2333333 33322 2211 12
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.+.|.
T Consensus 231 ~~d~vid~~g~ 241 (339)
T cd08239 231 GADVAIECSGN 241 (339)
T ss_pred CCCEEEECCCC
Confidence 69999999884
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.11 Score=44.95 Aligned_cols=112 Identities=14% Similarity=0.086 Sum_probs=69.4
Q ss_pred EEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCCC---eEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 20 ALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGF---VVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+.|.|+ |.+|.+++..++..| .+++++++++++.+....++.+... ......+ .+.++ + .
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~----l--------~ 65 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYAD----A--------A 65 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHH----h--------C
Confidence 357787 679999999999998 5899999999888777776664321 1111111 12221 1 5
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
..|++|.++|..... ..+. ...+..|+. +.+.+.+.+++. +.+.++++|.+.
T Consensus 66 ~aDiVIitag~p~~~---~~~R---~~l~~~n~~----i~~~~~~~i~~~~p~~~viv~sNP~ 118 (300)
T cd00300 66 DADIVVITAGAPRKP---GETR---LDLINRNAP----ILRSVITNLKKYGPDAIILVVSNPV 118 (300)
T ss_pred CCCEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccChH
Confidence 799999999974321 1121 233444443 345555555544 457888888544
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.066 Score=43.38 Aligned_cols=35 Identities=17% Similarity=0.346 Sum_probs=30.0
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~ 50 (272)
|++.+|+|.|+++ +|.++++.|+..|. ++.+++.+
T Consensus 17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence 6778999998765 99999999999998 68888754
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.023 Score=46.80 Aligned_cols=43 Identities=23% Similarity=0.220 Sum_probs=37.9
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 61 (272)
++.|.||+|.+|.++++.|++.|.+|.+.+|++++.+.+.+..
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~ 44 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA 44 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence 5899999999999999999999999999999998877766543
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.027 Score=44.92 Aligned_cols=43 Identities=21% Similarity=0.263 Sum_probs=35.7
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 62 (272)
+|.|.|+ |.+|+.+|..++..|++|.+++++++.+++..+.+.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 4678888 999999999999999999999999998877666554
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.059 Score=43.80 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=33.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
.+++||.|||.|| |.+|...++.|.+.|++|.++++.
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~ 42 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE 42 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence 5789999999998 899999999999999999998765
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.059 Score=44.18 Aligned_cols=193 Identities=17% Similarity=0.051 Sum_probs=109.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
.+.++.|+.+..|.++++.-...+..|.++.|+.. +++.+.. ...+.+++.|.-..+-.+... .++-
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw---~~~vswh~gnsfssn~~k~~l--------~g~t 119 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSW---PTYVSWHRGNSFSSNPNKLKL--------SGPT 119 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCC---CcccchhhccccccCcchhhh--------cCCc
Confidence 56799999999999999999999999999998865 2333222 233444444432211111011 2345
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
.++-++|... ....+..+|=....+..++. .+.+..++++||....-.+..-...|--+|.+.+.-
T Consensus 120 ~v~e~~ggfg----------n~~~m~~ing~ani~a~kaa----~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~E 185 (283)
T KOG4288|consen 120 FVYEMMGGFG----------NIILMDRINGTANINAVKAA----AKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAE 185 (283)
T ss_pred ccHHHhcCcc----------chHHHHHhccHhhHHHHHHH----HHcCCceEEEEEhhhcCCCCccchhhhccchHHHHH
Confidence 5555555321 12344455555555555655 566778999998755422222223588899877652
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhh-HhhhhC----HHHHHHH-------HhcC-----CCCCCCCHHHHHHHHHHH
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLV-ERLLEN----KEFVDKV-------IART-----PLQRVGEPEEVASLVAYL 240 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~-~~~~~~----~~~~~~~-------~~~~-----~~~~~~~~~e~a~~~~~l 240 (272)
-+...+.|-..+.||++..... ...... .+.++.. .... ......+++++|.+++..
T Consensus 186 ------ll~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~a 259 (283)
T KOG4288|consen 186 ------LLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKA 259 (283)
T ss_pred ------HHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHh
Confidence 2233356777889998855421 010000 1111111 1111 223456899999999887
Q ss_pred hcC
Q 024125 241 CLP 243 (272)
Q Consensus 241 ~~~ 243 (272)
+.+
T Consensus 260 i~d 262 (283)
T KOG4288|consen 260 IED 262 (283)
T ss_pred ccC
Confidence 754
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.05 Score=47.04 Aligned_cols=78 Identities=23% Similarity=0.374 Sum_probs=52.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (272)
.+.+++|+|+++++|.++++.+...|++|+.++++.++.+.+ +++ +.... .|..+.+..+.+. +..+ .
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~~~~----~~~~~~ 210 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GADVA---VDYTRPDWPDQVR----EALGGG 210 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCCEE---EecCCccHHHHHH----HHcCCC
Confidence 478999999999999999998889999999999888776544 332 22211 2333333222222 2222 2
Q ss_pred CccEEEECCC
Q 024125 95 KLNILVNNVG 104 (272)
Q Consensus 95 ~id~li~~ag 104 (272)
.+|+++++.|
T Consensus 211 ~~d~vl~~~g 220 (324)
T cd08244 211 GVTVVLDGVG 220 (324)
T ss_pred CceEEEECCC
Confidence 5999999987
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.019 Score=44.04 Aligned_cols=41 Identities=20% Similarity=0.185 Sum_probs=35.3
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 62 (272)
|+.+|+++-+|++||.+|.++|.+|++. +.++.+.++.++.
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~ 41 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP 41 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence 6889999999999999999999999998 6666777776664
|
This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases []. |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.023 Score=43.28 Aligned_cols=39 Identities=28% Similarity=0.334 Sum_probs=36.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+++||+++|.|-+.-+|+.++..|.++|++|.++.++.
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t 62 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT 62 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence 478999999999999999999999999999999998654
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.015 Score=48.21 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=33.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCC
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRN 50 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~---~v~~~~r~ 50 (272)
.++++++++|.|+ |+.|++++.+|.+.|. ++++++|+
T Consensus 21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 3688999999999 8999999999999997 59999998
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.029 Score=41.58 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=26.9
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC-E-EEEeeCCh
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA-V-VHTCSRNE 51 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~-~-v~~~~r~~ 51 (272)
+|.|.||+|-+|+++++.|.++-. + +.+++++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence 588999999999999999999754 4 45566655
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.24 Score=41.01 Aligned_cols=140 Identities=14% Similarity=0.188 Sum_probs=81.9
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhCCCeEEEEEe-
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSKGFVVSGSVC- 73 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~- 73 (272)
|++..|+|.|. ||+|+-.+..|++.|. ++.+++-+. ++.+.+++.+..-+.++.+...
T Consensus 28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~ 106 (263)
T COG1179 28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN 106 (263)
T ss_pred HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence 56778888887 6899999999999998 677766432 1222233333332233332222
Q ss_pred cCCCHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEec
Q 024125 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFIS 153 (272)
Q Consensus 74 D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vs 153 (272)
|.-.++.+++++. ..+|.||.+.-. +..=..|+.. .++++- .+|-..
T Consensus 107 ~f~t~en~~~~~~-------~~~DyvIDaiD~---------------------v~~Kv~Li~~----c~~~ki-~vIss~ 153 (263)
T COG1179 107 DFITEENLEDLLS-------KGFDYVIDAIDS---------------------VRAKVALIAY----CRRNKI-PVISSM 153 (263)
T ss_pred hhhCHhHHHHHhc-------CCCCEEEEchhh---------------------hHHHHHHHHH----HHHcCC-CEEeec
Confidence 3334555555542 357888766531 2222223333 344442 333333
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccC
Q 024125 154 SVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188 (272)
Q Consensus 154 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~ 188 (272)
..++...+.....-..+|.-.+-+.+.++.+|++.
T Consensus 154 Gag~k~DPTri~v~DiskT~~DPLa~~vR~~LRk~ 188 (263)
T COG1179 154 GAGGKLDPTRIQVADISKTIQDPLAAKVRRKLRKR 188 (263)
T ss_pred cccCCCCCceEEeeechhhccCcHHHHHHHHHHHh
Confidence 33444444455667889999999999999999887
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.13 Score=39.09 Aligned_cols=31 Identities=23% Similarity=0.312 Sum_probs=26.7
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~ 50 (272)
+|+|.|+ ||+|.++++.|++.|. ++.+++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 4788887 8999999999999998 78888754
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.095 Score=46.74 Aligned_cols=35 Identities=26% Similarity=0.479 Sum_probs=30.6
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~ 50 (272)
|++.+|+|.|+ ||+|.+++..|+..|. ++.+++.+
T Consensus 39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 67788999987 6999999999999997 88888764
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.057 Score=46.82 Aligned_cols=77 Identities=26% Similarity=0.250 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.++++||.|+++++|.++++.....|++|+.+++++++.+.+. ++ +.... .|..+. . .+.+.... ++.
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~v---~~~~~~-~-~~~~~~~~---~~~ 213 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KL---GAKEV---IPREEL-Q-EESIKPLE---KQR 213 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-Hc---CCCEE---EcchhH-H-HHHHHhhc---cCC
Confidence 3679999999999999999988889999999998887755552 22 22211 222222 1 12222221 145
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++.+.|
T Consensus 214 ~d~vld~~g 222 (326)
T cd08289 214 WAGAVDPVG 222 (326)
T ss_pred cCEEEECCc
Confidence 899998886
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.056 Score=37.38 Aligned_cols=36 Identities=39% Similarity=0.533 Sum_probs=32.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeC
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSR 49 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r 49 (272)
.++++|+++|.|+ |..|+.+++.+.+. +.+|.+++|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 5688999999999 99999999999998 568888877
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.13 Score=42.76 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=30.9
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE 51 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~ 51 (272)
|++++|+|.|+ ||+|.++++.|++.|. ++.+++.+.
T Consensus 25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 67788999987 5999999999999998 788887654
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.049 Score=47.59 Aligned_cols=83 Identities=18% Similarity=0.212 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCH--HHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP--DQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 93 (272)
.++++||.|+++++|.++++.....|++|+.+.++.+..++..+.+.+.+....+ +..+. .+..+.+.. ..+
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~i~~---~~~ 219 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVL---TEEELRSLLATELLKS---APG 219 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEE---eCcccccccHHHHHHH---HcC
Confidence 5789999999999999999988889999888877653222222222223332222 11111 022222222 222
Q ss_pred CCccEEEECCC
Q 024125 94 GKLNILVNNVG 104 (272)
Q Consensus 94 ~~id~li~~ag 104 (272)
+.+|.++.+.|
T Consensus 220 ~~~d~vld~~g 230 (341)
T cd08290 220 GRPKLALNCVG 230 (341)
T ss_pred CCceEEEECcC
Confidence 25899999887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.07 Score=46.43 Aligned_cols=79 Identities=23% Similarity=0.290 Sum_probs=48.5
Q ss_pred CCCEEEE-eCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALV-TGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlI-tGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.+..++| +|++|++|..+++.....|++|+.+++++++.+.+.+ .+.... + |..+.+-.++ +.+... +.
T Consensus 142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~~-i--~~~~~~~~~~-v~~~~~--~~ 211 (324)
T cd08291 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----IGAEYV-L--NSSDPDFLED-LKELIA--KL 211 (324)
T ss_pred CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcEE-E--ECCCccHHHH-HHHHhC--CC
Confidence 4444555 5999999999988777789999999988877655542 233222 1 2222222222 222211 12
Q ss_pred CccEEEECCC
Q 024125 95 KLNILVNNVG 104 (272)
Q Consensus 95 ~id~li~~ag 104 (272)
.+|+++.+.|
T Consensus 212 ~~d~vid~~g 221 (324)
T cd08291 212 NATIFFDAVG 221 (324)
T ss_pred CCcEEEECCC
Confidence 5999999887
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.041 Score=49.25 Aligned_cols=38 Identities=21% Similarity=0.306 Sum_probs=34.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+++||++.|.| .|.||+++++.|...|.+|+.++|+.
T Consensus 195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~ 232 (386)
T PLN03139 195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK 232 (386)
T ss_pred cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence 579999999999 57899999999999999999998864
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.031 Score=47.62 Aligned_cols=44 Identities=18% Similarity=0.227 Sum_probs=38.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~ 61 (272)
+++++|.|+ ||.+++++..|++.|+ +|+++.|+.++.+++.+.+
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 578999996 8999999999999998 6999999998888776654
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.067 Score=45.74 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=31.2
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE 51 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~ 51 (272)
|++.+|+|.|+ ||+|..++..|+..|. ++.++|.+.
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 67889999987 5999999999999998 788887653
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.36 Score=41.80 Aligned_cols=114 Identities=13% Similarity=0.061 Sum_probs=66.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++|.|.|+ |-+|..++..++.+|. +|++++++++.++....++.+. ...... .. .+|.++ +
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i-~~-~~d~~~----~------- 68 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKI-TG-TNDYED----I------- 68 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEE-Ee-CCCHHH----H-------
Confidence 57899998 8999999999998875 9999999887765444333322 111111 11 122211 1
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
...|++|.++|..... ..+. .+.+..|+ .+.+.+++.+.+. +.+.+|+++...
T Consensus 69 -~~aDiVii~~~~p~~~---~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~viv~tNP~ 122 (307)
T PRK06223 69 -AGSDVVVITAGVPRKP---GMSR---DDLLGINA----KIMKDVAEGIKKYAPDAIVIVVTNPV 122 (307)
T ss_pred -CCCCEEEECCCCCCCc---CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence 4689999999874321 1121 22333343 3444555555443 345677776544
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.078 Score=46.05 Aligned_cols=78 Identities=19% Similarity=0.252 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+.+++|.|+++.+|.++++.....|++|+.+.++.++.+.+ +++ +.+.. .+..+. +..+.+... .+..
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~-~~~~~~~~~---~~~~ 207 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCDRP---INYKTE-DLGEVLKKE---YPKG 207 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCceE---EeCCCc-cHHHHHHHh---cCCC
Confidence 578999999999999999998888899999988887765544 222 22211 122222 222222222 2235
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++++.|
T Consensus 208 vd~v~~~~g 216 (329)
T cd08250 208 VDVVYESVG 216 (329)
T ss_pred CeEEEECCc
Confidence 999999887
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.098 Score=46.55 Aligned_cols=79 Identities=18% Similarity=0.244 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (272)
.|.++||+|+ |+||..+++.....|+ +|+.++++.++.+... ++ +.... .|..+ .+++.+.+.++. +
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~---Ga~~~---i~~~~~~~~~~~~v~~~~---~ 253 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KL---GATDC---VNPNDYDKPIQEVIVEIT---D 253 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCCeE---EcccccchhHHHHHHHHh---C
Confidence 4789999985 8999999988888898 7999999888766553 22 22221 23322 122333333332 2
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+.+|++|.++|.
T Consensus 254 ~g~d~vid~~G~ 265 (368)
T TIGR02818 254 GGVDYSFECIGN 265 (368)
T ss_pred CCCCEEEECCCC
Confidence 369999999983
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.07 Score=45.75 Aligned_cols=42 Identities=36% Similarity=0.465 Sum_probs=36.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~ 57 (272)
.+++++|+|+++++|.++++.+...|+.|+.++++.++.+.+
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 180 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA 180 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence 578999999999999999999999999999998887665544
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.077 Score=48.00 Aligned_cols=85 Identities=13% Similarity=0.176 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
.|.+|+|.|++|++|..+++.+...|+ +|+.+++++++++...+.+... +.... ..|..+.++..+.+.++
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~--~i~~~~~~~~~~~v~~~ 252 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELL--YVNPATIDDLHATLMEL 252 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEE--EECCCccccHHHHHHHH
Confidence 468999999999999998886666554 7999999998877655422110 11211 22332222233333333
Q ss_pred HHHcCCCccEEEECCC
Q 024125 89 GSKFNGKLNILVNNVG 104 (272)
Q Consensus 89 ~~~~~~~id~li~~ag 104 (272)
.. +..+|++|.+.|
T Consensus 253 t~--g~g~D~vid~~g 266 (410)
T cd08238 253 TG--GQGFDDVFVFVP 266 (410)
T ss_pred hC--CCCCCEEEEcCC
Confidence 21 125899999887
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.056 Score=42.54 Aligned_cols=47 Identities=26% Similarity=0.268 Sum_probs=36.2
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
..-.+...+++|+| +|-.|+..++.+...|++|+..+.+.+..++..
T Consensus 14 ~~~~~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~ 60 (168)
T PF01262_consen 14 GPGGVPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLE 60 (168)
T ss_dssp TTTEE-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH
T ss_pred CCCCCCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh
Confidence 33456778999999 689999999999999999999999887666543
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.018 Score=44.88 Aligned_cols=44 Identities=25% Similarity=0.382 Sum_probs=33.8
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~ 55 (272)
..+++||+++|.|.+.-+|+-++..|.++|+.|.++..+.+.++
T Consensus 31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~ 74 (160)
T PF02882_consen 31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ 74 (160)
T ss_dssp T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH
T ss_pred CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc
Confidence 34699999999999999999999999999999999876654433
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.28 Score=42.50 Aligned_cols=121 Identities=15% Similarity=0.019 Sum_probs=68.9
Q ss_pred hHHHHHHHHHHHCCCEEEEeeCChHHHH-HHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEECCCCC
Q 024125 28 GIGQATVEELAGLGAVVHTCSRNEVELN-KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN 106 (272)
Q Consensus 28 giG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 106 (272)
.=|+++|+.|++.|++|++.+|+.+..+ +..+.+.+.+... ++ +..+++ ...|+||.|-.
T Consensus 30 ~gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~----Aa-----S~aEAA--------a~ADVVIL~LP-- 90 (341)
T TIGR01724 30 YGGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKV----VS-----DDKEAA--------KHGEIHVLFTP-- 90 (341)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCee----cC-----CHHHHH--------hCCCEEEEecC--
Confidence 3478999999999999999999877653 3334444444321 11 122233 35799998875
Q ss_pred CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHH-
Q 024125 107 IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW- 185 (272)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el- 185 (272)
+.+..+..+ ..+++.+. .+..||.+|++. ...... .|-.+|
T Consensus 91 --------d~aaV~eVl-----------~GLaa~L~--~GaIVID~STIs----------P~t~~~-------~~e~~l~ 132 (341)
T TIGR01724 91 --------FGKGTFSIA-----------RTIIEHVP--ENAVICNTCTVS----------PVVLYY-------SLEKILR 132 (341)
T ss_pred --------CHHHHHHHH-----------HHHHhcCC--CCCEEEECCCCC----------HHHHHH-------HHHHHhh
Confidence 333333332 23444432 223455555443 122222 233333
Q ss_pred -ccCCeeEEEeeCCccc-Chhh
Q 024125 186 -AKDNIRTNSVAPWYTK-TSLV 205 (272)
Q Consensus 186 -~~~~i~v~~v~PG~v~-t~~~ 205 (272)
+.+.+.|.+.+|+.|. |+.+
T Consensus 133 ~~r~d~~v~s~HP~~vP~~~~~ 154 (341)
T TIGR01724 133 LKRTDVGISSMHPAAVPGTPQH 154 (341)
T ss_pred cCccccCeeccCCCCCCCCCCC
Confidence 4567999999999884 4443
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.24 Score=36.63 Aligned_cols=67 Identities=21% Similarity=0.384 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC-CccEEEECCCC
Q 024125 28 GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG-KLNILVNNVGT 105 (272)
Q Consensus 28 giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~id~li~~ag~ 105 (272)
|||...++.+...|++|+.+++++++.+.+. +.+.... .|.++.+ +.+++.+..++ .+|++|.|+|.
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~----~~Ga~~~---~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~ 68 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK----ELGADHV---IDYSDDD----FVEQIRELTGGRGVDVVIDCVGS 68 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HTTESEE---EETTTSS----HHHHHHHHTTTSSEEEEEESSSS
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH----hhccccc---ccccccc----cccccccccccccceEEEEecCc
Confidence 6899999988889999999999998865543 2332222 2333333 34444444433 69999999993
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.35 Score=42.00 Aligned_cols=114 Identities=16% Similarity=0.172 Sum_probs=71.1
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCC-----CeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG-----FVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+|.|.|+ |.+|..+|..++.++. ++++++.+++..+....++.... .++.... .+.++ +
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~-------~--- 66 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDD-------C--- 66 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHH-------h---
Confidence 3678898 9999999999998875 79999998887766666665421 1333322 22222 1
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVG 156 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~ 156 (272)
...|++|.+||.... + ..+.+ =.+.++.|+ .+.+.+.|.+.+.. .+.++.+|-+.
T Consensus 67 --~~aDivvitaG~~~k-p--g~tr~-R~dll~~N~----~I~~~i~~~i~~~~p~~i~ivvsNPv 122 (307)
T cd05290 67 --ADADIIVITAGPSID-P--GNTDD-RLDLAQTNA----KIIREIMGNITKVTKEAVIILITNPL 122 (307)
T ss_pred --CCCCEEEECCCCCCC-C--CCCch-HHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecCcH
Confidence 479999999997422 1 11210 123444454 45566666666554 46777777643
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.11 Score=44.32 Aligned_cols=109 Identities=17% Similarity=0.234 Sum_probs=71.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+|++++|.||+|..|+-+-+--.-.|+.|+..+-+.|+..-++.++ +-+. ..+.-++.+..+++.+ .++..
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~---G~d~---afNYK~e~~~~~aL~r---~~P~G 223 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLSAALKR---CFPEG 223 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhcc---CCcc---ceeccCccCHHHHHHH---hCCCc
Confidence 5799999999999998666544456999988887777766555433 2121 1233333344334433 45557
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV 161 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~ 161 (272)
+|+.+-|.|.. ++.+.+..|+.+ |||+..+-++.++..
T Consensus 224 IDiYfeNVGG~--------------------------~lDavl~nM~~~--gri~~CG~ISqYN~~ 261 (343)
T KOG1196|consen 224 IDIYFENVGGK--------------------------MLDAVLLNMNLH--GRIAVCGMISQYNLE 261 (343)
T ss_pred ceEEEeccCcH--------------------------HHHHHHHhhhhc--cceEeeeeehhcccc
Confidence 99999999851 124555666655 799998877766543
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.076 Score=47.27 Aligned_cols=78 Identities=23% Similarity=0.337 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||+|+ |++|..+++.....|+ +|+.+++++++.+... ++ +... ..|..+.+- .+++.+..++
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~-~~---Ga~~---~i~~~~~~~----~~~i~~~~~~ 258 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR-EL---GATA---TVNAGDPNA----VEQVRELTGG 258 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-Hc---CCce---EeCCCchhH----HHHHHHHhCC
Confidence 4789999985 8999999888888899 6888888888766442 22 2221 123333222 2222222223
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.+.|.
T Consensus 259 g~d~vid~~G~ 269 (371)
T cd08281 259 GVDYAFEMAGS 269 (371)
T ss_pred CCCEEEECCCC
Confidence 69999999883
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.14 Score=45.45 Aligned_cols=79 Identities=16% Similarity=0.259 Sum_probs=52.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCH-HHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 93 (272)
.|.+|||+|+ |++|..+++.+...|+ .|+.+++++++.+... ++ +.... .|..+. +++.+.+.++. +
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~-~l---Ga~~~---i~~~~~~~~~~~~v~~~~---~ 254 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK-KF---GATDC---VNPKDHDKPIQQVLVEMT---D 254 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hc---CCCEE---EcccccchHHHHHHHHHh---C
Confidence 4889999975 8999999998888899 6999999888766442 22 32221 233322 23433343332 2
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+.+|+++.+.|.
T Consensus 255 ~g~d~vid~~g~ 266 (368)
T cd08300 255 GGVDYTFECIGN 266 (368)
T ss_pred CCCcEEEECCCC
Confidence 369999999883
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.99 Score=37.85 Aligned_cols=82 Identities=20% Similarity=0.291 Sum_probs=57.7
Q ss_pred CCC-CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSL-KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l-~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+.+ .|.+|||.-|.||+|..+++.+-..|++++.+..+.++.+..++. +.. +..|.+.++ .++++.+-
T Consensus 142 y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken----G~~---h~I~y~~eD----~v~~V~ki 210 (336)
T KOG1197|consen 142 YNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN----GAE---HPIDYSTED----YVDEVKKI 210 (336)
T ss_pred cCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc----CCc---ceeeccchh----HHHHHHhc
Confidence 344 488999999999999999999988999999999888887766543 221 234444333 33344333
Q ss_pred c-CCCccEEEECCCC
Q 024125 92 F-NGKLNILVNNVGT 105 (272)
Q Consensus 92 ~-~~~id~li~~ag~ 105 (272)
. +..+|+++...|.
T Consensus 211 TngKGVd~vyDsvG~ 225 (336)
T KOG1197|consen 211 TNGKGVDAVYDSVGK 225 (336)
T ss_pred cCCCCceeeeccccc
Confidence 3 2359999888774
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.27 Score=42.98 Aligned_cols=42 Identities=17% Similarity=0.002 Sum_probs=34.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 60 (272)
++|.|.|+ |-+|..+|..|+..|++|.+.+++++..+...+.
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~ 49 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRAN 49 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 56777765 7899999999999999999999998876654443
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.079 Score=45.30 Aligned_cols=42 Identities=26% Similarity=0.280 Sum_probs=36.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~ 57 (272)
.+++++|.|+++++|.++++.....|+.|+.++++.++.+.+
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 177 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA 177 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 578999999999999999998888999999998887775544
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.025 Score=48.65 Aligned_cols=40 Identities=20% Similarity=0.214 Sum_probs=36.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~ 52 (272)
.+++||++.|.|.++-+|+.++..|.++|++|.++.|+..
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~ 194 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST 194 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence 4689999999999999999999999999999999976553
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.2 Score=40.58 Aligned_cols=71 Identities=18% Similarity=0.077 Sum_probs=47.2
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhC-----------CCeEEEEEecCCCHHHHHHHHHH
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSK-----------GFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
....+|+|-||.++++.|++.|++|++..|+.++ .+...+.+... ..++.++..- .+.+..++.+
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~ 79 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAE 79 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHH
Confidence 4456788999999999999999999998665544 44444443211 2344444333 3567777888
Q ss_pred HHHHcC
Q 024125 88 VGSKFN 93 (272)
Q Consensus 88 ~~~~~~ 93 (272)
+.+.++
T Consensus 80 l~~~~~ 85 (211)
T COG2085 80 LRDALG 85 (211)
T ss_pred HHHHhC
Confidence 877763
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.1 Score=46.64 Aligned_cols=79 Identities=19% Similarity=0.233 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCH-HHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 93 (272)
.|++|||.|+ |+||..+++.....|+ +|+.+++++++++... ++ +.... .|..+. ++..+.+.++. +
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~---Ga~~~---i~~~~~~~~~~~~v~~~~---~ 266 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM---GITDF---INPKDSDKPVHERIREMT---G 266 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc---CCcEE---EecccccchHHHHHHHHh---C
Confidence 4789999985 9999999998888898 6999999888766553 22 32221 233322 12333333332 2
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+.+|++|.+.|.
T Consensus 267 ~g~dvvid~~G~ 278 (381)
T PLN02740 267 GGVDYSFECAGN 278 (381)
T ss_pred CCCCEEEECCCC
Confidence 369999999984
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.1 Score=46.70 Aligned_cols=75 Identities=17% Similarity=0.253 Sum_probs=48.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++++|.|+ |++|..+++.....|++|++++++.++..+..+++ +.... .|..+.+.+ .+.. +.
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l---Ga~~~---i~~~~~~~v-------~~~~-~~ 242 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL---GADSF---LVTTDSQKM-------KEAV-GT 242 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC---CCcEE---EcCcCHHHH-------HHhh-CC
Confidence 5789999986 89999999988888999988887765533333332 32221 233332222 1122 35
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|+++.+.|.
T Consensus 243 ~D~vid~~G~ 252 (375)
T PLN02178 243 MDFIIDTVSA 252 (375)
T ss_pred CcEEEECCCc
Confidence 8999999883
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.17 Score=43.86 Aligned_cols=114 Identities=13% Similarity=0.106 Sum_probs=68.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++|.|+|+ |++|++++..|+.++. ++++++..++..+-...++.+. +... .+..| .+.+++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~-~i~~~-~~y~~~---------- 67 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDV-KITGD-GDYEDL---------- 67 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCce-EEecC-CChhhh----------
Confidence 47889999 9999999999988764 8999999866655544444332 1111 11222 112211
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
...|+++-.||...... .+. .+.+..|..=.-.+.+.+ .+. +.+.++.++-+.
T Consensus 68 --~~aDiVvitAG~prKpG---mtR---~DLl~~Na~I~~~i~~~i----~~~~~d~ivlVvtNPv 121 (313)
T COG0039 68 --KGADIVVITAGVPRKPG---MTR---LDLLEKNAKIVKDIAKAI----AKYAPDAIVLVVTNPV 121 (313)
T ss_pred --cCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHH----HhhCCCeEEEEecCcH
Confidence 46899999999743222 122 345566655444444443 443 346777776543
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.08 Score=47.01 Aligned_cols=74 Identities=18% Similarity=0.289 Sum_probs=48.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||.|+ |++|..+++.....|++|++++.+.++..+..+++ +.... .|..+.+.+.+ .. +.
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~v---i~~~~~~~~~~-------~~-~~ 247 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADSF---LVSTDPEKMKA-------AI-GT 247 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcEE---EcCCCHHHHHh-------hc-CC
Confidence 5889999775 89999999988888999888877765544443332 32221 23333322221 12 35
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++|.+.|
T Consensus 248 ~D~vid~~g 256 (360)
T PLN02586 248 MDYIIDTVS 256 (360)
T ss_pred CCEEEECCC
Confidence 899999988
|
|
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.09 Score=46.27 Aligned_cols=78 Identities=27% Similarity=0.308 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.+++++|+|+ +++|..+++.+...|+ +|++++++.++.+.+. ++ +.+.. .|..+.+-. +++.+..++
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~---ga~~~---i~~~~~~~~----~~l~~~~~~ 239 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-EL---GATIV---LDPTEVDVV----AEVRKLTGG 239 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCEE---ECCCccCHH----HHHHHHhCC
Confidence 5789999985 8999999998889999 7888888887765442 22 32222 233332222 222222222
Q ss_pred -CccEEEECCCC
Q 024125 95 -KLNILVNNVGT 105 (272)
Q Consensus 95 -~id~li~~ag~ 105 (272)
.+|+++.+.|.
T Consensus 240 ~~~d~vid~~g~ 251 (351)
T cd08233 240 GGVDVSFDCAGV 251 (351)
T ss_pred CCCCEEEECCCC
Confidence 49999999983
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.12 Score=45.75 Aligned_cols=41 Identities=24% Similarity=0.220 Sum_probs=34.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKC 57 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~ 57 (272)
.++++||+| ++++|.++++.....|+ +|+.+++++++.+.+
T Consensus 177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~ 218 (361)
T cd08231 177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA 218 (361)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 688999997 59999999998888899 899998887765543
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.11 Score=44.55 Aligned_cols=76 Identities=26% Similarity=0.351 Sum_probs=50.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.++||.|+++.+|.++++.....|++|+.+.+++++.+.+ .+ .+....+ . + .. +..+.+.+. +.+
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~~-~-~--~~-~~~~~i~~~----~~~ 208 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KE---LGADEVV-I-D--DG-AIAEQLRAA----PGG 208 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hh---cCCcEEE-e-c--Cc-cHHHHHHHh----CCC
Confidence 578999999999999999998888999999988887765444 22 2222111 1 1 11 121222222 246
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++++.|
T Consensus 209 ~d~vl~~~~ 217 (320)
T cd08243 209 FDKVLELVG 217 (320)
T ss_pred ceEEEECCC
Confidence 999999887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.19 Score=45.31 Aligned_cols=80 Identities=21% Similarity=0.285 Sum_probs=47.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.+++|||. |+|+||..+++.+...|+.+++ ++++.++++... ++ +... .+.++..+..+.+.++.. +.
T Consensus 185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~-~~---Ga~~----v~~~~~~~~~~~v~~~~~--~~ 253 (393)
T TIGR02819 185 PGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQAR-SF---GCET----VDLSKDATLPEQIEQILG--EP 253 (393)
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-Hc---CCeE----EecCCcccHHHHHHHHcC--CC
Confidence 47899995 5689999999888888997544 556665554433 22 3321 232222222222322221 12
Q ss_pred CccEEEECCCCC
Q 024125 95 KLNILVNNVGTN 106 (272)
Q Consensus 95 ~id~li~~ag~~ 106 (272)
.+|++|.+.|..
T Consensus 254 g~Dvvid~~G~~ 265 (393)
T TIGR02819 254 EVDCAVDCVGFE 265 (393)
T ss_pred CCcEEEECCCCc
Confidence 589999999963
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.033 Score=41.67 Aligned_cols=84 Identities=15% Similarity=0.173 Sum_probs=50.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHh----------CCCeEEEEEecCCCHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQS----------KGFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~ 85 (272)
..++-|.|+ |-+|.++++.|.+.|+.|..+ +|+.+..++..+.+.. ...++.++. +.| +.+..+.
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~ia--vpD-daI~~va 85 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIA--VPD-DAIAEVA 85 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE---S-C-CHHHHHH
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEE--ech-HHHHHHH
Confidence 356888888 889999999999999988765 5666555555443321 122343332 333 3677778
Q ss_pred HHHHHH--cCCCccEEEECCCC
Q 024125 86 QEVGSK--FNGKLNILVNNVGT 105 (272)
Q Consensus 86 ~~~~~~--~~~~id~li~~ag~ 105 (272)
+++... + .+=.+++||.|.
T Consensus 86 ~~La~~~~~-~~g~iVvHtSGa 106 (127)
T PF10727_consen 86 EQLAQYGAW-RPGQIVVHTSGA 106 (127)
T ss_dssp HHHHCC--S--TT-EEEES-SS
T ss_pred HHHHHhccC-CCCcEEEECCCC
Confidence 887765 2 233699999996
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.054 Score=38.07 Aligned_cols=37 Identities=27% Similarity=0.334 Sum_probs=32.7
Q ss_pred CCChHHHHHHHHHHHCC---CEEEEe-eCChHHHHHHHHHH
Q 024125 25 GTRGIGQATVEELAGLG---AVVHTC-SRNEVELNKCLKEW 61 (272)
Q Consensus 25 a~~giG~~ia~~l~~~G---~~v~~~-~r~~~~~~~~~~~~ 61 (272)
|+|.+|.++++.|+++| .+|+++ .|++++.+++.++.
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 78999999999999999 788855 99999988887664
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.049 Score=46.47 Aligned_cols=39 Identities=21% Similarity=0.358 Sum_probs=34.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+++||+|+|.|.+.-+|+-++..|.++|++|.++....
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t 191 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT 191 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999999999999999998875443
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.092 Score=46.47 Aligned_cols=79 Identities=22% Similarity=0.363 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|+++||.|+ |++|..+++.....|+. |+.+++++++.+... ++ +.... .|..+.+..++ +.+... +.
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~---Ga~~~---i~~~~~~~~~~-i~~~~~--~~ 244 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EF---GATHT---VNSSGTDPVEA-IRALTG--GF 244 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCceE---EcCCCcCHHHH-HHHHhC--CC
Confidence 4789999985 99999999988888984 888888887765543 22 22211 23333222222 222211 12
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.+.|.
T Consensus 245 g~d~vid~~g~ 255 (358)
T TIGR03451 245 GADVVIDAVGR 255 (358)
T ss_pred CCCEEEECCCC
Confidence 59999999983
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.07 Score=47.75 Aligned_cols=39 Identities=28% Similarity=0.476 Sum_probs=34.9
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
..++.||++.|.|. |.||+++++.|...|.+|+..+|+.
T Consensus 187 ~~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 187 SYDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred ceecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence 35799999999998 6699999999999999999999875
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.085 Score=45.54 Aligned_cols=79 Identities=16% Similarity=0.263 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+.+++|.|+++++|.++++.+...|+.++.+.++.++.+.+ +++ +.+- ..+..+.+..++ +.+... +..
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~-~~~~~~--~~~ 207 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---GADE---VIDSSPEDLAQR-VKEATG--GAG 207 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---CCCE---EecccchhHHHH-HHHHhc--CCC
Confidence 578999999999999999999999999999988887765544 222 2211 112222222222 222211 135
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++.|.|
T Consensus 208 ~d~vl~~~g 216 (323)
T cd05282 208 ARLALDAVG 216 (323)
T ss_pred ceEEEECCC
Confidence 999999887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.14 Score=44.28 Aligned_cols=80 Identities=18% Similarity=0.350 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+.+++|+|+++++|+++++.+...|+.++++.++.++.+.+. + .+.+.. .+..+.+...+.+.+... +..
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~~---~~~~~~~~~~~~~~~~~~--~~~ 210 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-K---LAAIIL---IRYPDEEGFAPKVKKLTG--EKG 210 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCcEE---EecCChhHHHHHHHHHhC--CCC
Confidence 4789999999999999999999999999888888877655542 2 222211 222222212222222221 135
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++++.+
T Consensus 211 ~d~~i~~~~ 219 (334)
T PTZ00354 211 VNLVLDCVG 219 (334)
T ss_pred ceEEEECCc
Confidence 999999876
|
|
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.11 Score=45.34 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+.++||.|+++++|.++++.+...|++|+.+.+++++.+.+ +++ +.+.. .+..+.+..+++.+.. . +..
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~~~~~~~~~~~-~--~~~ 234 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL---GADAF---VDFKKSDDVEAVKELT-G--GGG 234 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCcEE---EcCCCccHHHHHHHHh-c--CCC
Confidence 478999999999999999999999999999999988776544 332 22211 2233332222222211 1 135
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++++.+
T Consensus 235 vd~vl~~~~ 243 (341)
T cd08297 235 AHAVVVTAV 243 (341)
T ss_pred CCEEEEcCC
Confidence 999998765
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.077 Score=46.88 Aligned_cols=74 Identities=18% Similarity=0.258 Sum_probs=47.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC---hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.|++|+|+|+ |++|...++.+...|++|++++|+ +++.+ +.+ +.+... .|..+. +..+ . ...
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~---~~Ga~~----v~~~~~-~~~~-~----~~~ 236 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVE---ELGATY----VNSSKT-PVAE-V----KLV 236 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHH---HcCCEE----ecCCcc-chhh-h----hhc
Confidence 5889999986 999999998877889999999883 44433 222 333332 232222 2221 1 112
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
+.+|++|.+.|.
T Consensus 237 -~~~d~vid~~g~ 248 (355)
T cd08230 237 -GEFDLIIEATGV 248 (355)
T ss_pred -CCCCEEEECcCC
Confidence 469999999983
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.15 Score=48.99 Aligned_cols=81 Identities=11% Similarity=0.204 Sum_probs=52.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhC--CCeEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSK--GFVVSGS 71 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~ 71 (272)
.|++++|+|.| .||+|..++..|+..|. ++.+++.+. .+.+..++.+.+. ..++..+
T Consensus 40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~ 118 (679)
T PRK14851 40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF 118 (679)
T ss_pred HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence 36789999999 57999999999999998 777776432 2233334444432 3455566
Q ss_pred EecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
...++ .+.+.+++ ..+|+||.|..
T Consensus 119 ~~~i~-~~n~~~~l--------~~~DvVid~~D 142 (679)
T PRK14851 119 PAGIN-ADNMDAFL--------DGVDVVLDGLD 142 (679)
T ss_pred ecCCC-hHHHHHHH--------hCCCEEEECCC
Confidence 65564 33444444 35777776654
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.14 Score=44.50 Aligned_cols=31 Identities=29% Similarity=0.429 Sum_probs=26.6
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~ 50 (272)
+|||.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D 32 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD 32 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 4788886 8999999999999998 78888754
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.11 Score=47.55 Aligned_cols=41 Identities=24% Similarity=0.357 Sum_probs=36.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL 54 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~ 54 (272)
..+.||+++|.|.+ .||+.+|+.+...|++|+++.+++.+.
T Consensus 250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a 290 (476)
T PTZ00075 250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA 290 (476)
T ss_pred CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 46899999999977 599999999999999999998876554
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.2 Score=44.47 Aligned_cols=78 Identities=19% Similarity=0.232 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCH-HHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 93 (272)
.|.+|||.|+ |++|..+++.....|+ +|+.++++.++.+.+. + .+.... .|..+. +++.+.+.++. +
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~-~---~Ga~~~---i~~~~~~~~~~~~v~~~~---~ 255 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK-K---FGVTEF---VNPKDHDKPVQEVIAEMT---G 255 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---cCCceE---EcccccchhHHHHHHHHh---C
Confidence 4789999985 8999999988888898 7999999887766442 2 232221 122221 23333333332 2
Q ss_pred CCccEEEECCC
Q 024125 94 GKLNILVNNVG 104 (272)
Q Consensus 94 ~~id~li~~ag 104 (272)
+.+|+++.+.|
T Consensus 256 ~~~d~vid~~G 266 (369)
T cd08301 256 GGVDYSFECTG 266 (369)
T ss_pred CCCCEEEECCC
Confidence 36999999987
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.067 Score=42.50 Aligned_cols=44 Identities=25% Similarity=0.287 Sum_probs=37.2
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~ 55 (272)
...++.||++.|.|. |.||+++|+.+..-|++|+.++|+.....
T Consensus 30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE 73 (178)
T ss_dssp TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred CccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence 446799999999976 89999999999999999999999887644
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.16 Score=44.70 Aligned_cols=41 Identities=24% Similarity=0.362 Sum_probs=33.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKC 57 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~ 57 (272)
.+++++|+| ++++|..+++.....|++ |+.+++++++.+.+
T Consensus 160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~ 201 (347)
T PRK10309 160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA 201 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence 478999997 599999999988888996 67888888776643
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.14 Score=49.44 Aligned_cols=79 Identities=15% Similarity=0.146 Sum_probs=53.8
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCCh------------------HHHHHHHHHHHhC--CCeEEEEE
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNE------------------VELNKCLKEWQSK--GFVVSGSV 72 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~------------------~~~~~~~~~~~~~--~~~~~~~~ 72 (272)
|++++|+|.|+ | +|..++..|++.|. ++.+++.+. .|.+..++.+.+. ..++..+.
T Consensus 105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~ 182 (722)
T PRK07877 105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT 182 (722)
T ss_pred HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence 67899999999 4 99999999999994 788887532 2233344444433 34566666
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 73 ~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
..++ .+.+++++ ..+|+||.|.-
T Consensus 183 ~~i~-~~n~~~~l--------~~~DlVvD~~D 205 (722)
T PRK07877 183 DGLT-EDNVDAFL--------DGLDVVVEECD 205 (722)
T ss_pred ccCC-HHHHHHHh--------cCCCEEEECCC
Confidence 6665 45555555 35788887764
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.26 Score=40.15 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=33.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+++||+|||.|| |.+|..-++.|++.|++|.+++...
T Consensus 5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~ 42 (205)
T TIGR01470 5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL 42 (205)
T ss_pred EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 4689999999997 6789999999999999999987654
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.47 Score=44.16 Aligned_cols=125 Identities=18% Similarity=0.118 Sum_probs=67.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|+++|.|. |+.|.++|+.|.++|+.|.+.+.+... + ..+.+.+.+..+.+...+.. ++ .+
T Consensus 4 ~~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~~~-~-~~~~L~~~~~~~~~~~g~~~-~~----~~-------- 67 (498)
T PRK02006 4 DLQGPMVLVLGL-GESGLAMARWCARHGARLRVADTREAP-P-NLAALRAELPDAEFVGGPFD-PA----LL-------- 67 (498)
T ss_pred ccCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCCCc-h-hHHHHHhhcCCcEEEeCCCc-hh----Hh--------
Confidence 467889999995 579999999999999999999865422 1 11223332212222221111 11 12
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHH--HHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKI--MTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGG 157 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~--~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~ 157 (272)
...|+||..+|+.... .+ ....+.+. ..+.+.+-..++..++..+.... ...+|-|+...|
T Consensus 68 ~~~d~vv~sp~I~~~~--~~-~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnG 131 (498)
T PRK02006 68 DGVDLVALSPGLSPLE--AA-LAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNG 131 (498)
T ss_pred cCCCEEEECCCCCCcc--cc-cCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCc
Confidence 2479999999874321 00 01222222 24455655555555544332221 125666665444
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.067 Score=44.16 Aligned_cols=77 Identities=21% Similarity=0.261 Sum_probs=54.6
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++.|++||=.|+++| -+++.+++.|++|...|-+++..+.......+.+..+.+.+ . .++++.+.-
T Consensus 56 ~~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~----~~edl~~~~ 122 (243)
T COG2227 56 FDLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQ------A----TVEDLASAG 122 (243)
T ss_pred cCCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchh------h----hHHHHHhcC
Confidence 4489999999999999 68999999999999999988888777766555544322221 1 223333222
Q ss_pred CCCccEEEECC
Q 024125 93 NGKLNILVNNV 103 (272)
Q Consensus 93 ~~~id~li~~a 103 (272)
++.|+|+|.=
T Consensus 123 -~~FDvV~cmE 132 (243)
T COG2227 123 -GQFDVVTCME 132 (243)
T ss_pred -CCccEEEEhh
Confidence 5799998654
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.61 Score=38.38 Aligned_cols=75 Identities=17% Similarity=0.088 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.+.++|-.|+++|. ++..+++.|. +|+.++.+++.++...+.+...+.++.++..|..+. +. .+
T Consensus 36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~------~~ 100 (223)
T PRK14967 36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE------FR 100 (223)
T ss_pred CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc------CC
Confidence 35789989887755 3444555566 899999999888777766665555666666665321 11 14
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
..|+|+.|...
T Consensus 101 ~fD~Vi~npPy 111 (223)
T PRK14967 101 PFDVVVSNPPY 111 (223)
T ss_pred CeeEEEECCCC
Confidence 69999999764
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.26 Score=44.99 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=65.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC---CC----EEEEeeC--ChHHHHHHHHHHHhCC----CeEEEEEecCCCHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGL---GA----VVHTCSR--NEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKL 84 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~---G~----~v~~~~r--~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~ 84 (272)
-+|.||||+|-||.++.-.++.- |. .+++++. +.+.++...-++++.. ..+.+ ..| +.++
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i-~~~--~~ea---- 196 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISV-TTD--LDVA---- 196 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEE-EEC--CHHH----
Confidence 56999999999999999999862 32 4677887 5777776666665431 12222 222 2222
Q ss_pred HHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC--CeEEEec
Q 024125 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV--GSIVFIS 153 (272)
Q Consensus 85 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--g~ii~vs 153 (272)
+ ...|++|..+|.... + ..+ -.+.++.|+.=. +...+.+.+... .+|+.+.
T Consensus 197 ~--------~daDvvIitag~prk-~--G~~---R~DLL~~N~~If----k~~g~~I~~~a~~~~~VlVv~ 249 (452)
T cd05295 197 F--------KDAHVIVLLDDFLIK-E--GED---LEGCIRSRVAIC----QLYGPLIEKNAKEDVKVIVAG 249 (452)
T ss_pred h--------CCCCEEEECCCCCCC-c--CCC---HHHHHHHHHHHH----HHHHHHHHHhCCCCCeEEEEe
Confidence 2 579999999997322 1 112 234556665444 444444454433 4455554
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.16 Score=43.31 Aligned_cols=77 Identities=17% Similarity=0.193 Sum_probs=48.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.+++|||.|+ |++|..+++.+...|++ |+.+++++++.+... + .+.... .|..+. .+.+.++.. +.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~-~---~Ga~~~---i~~~~~---~~~~~~~~~--~~ 186 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELAL-S---FGATAL---AEPEVL---AERQGGLQN--GR 186 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H---cCCcEe---cCchhh---HHHHHHHhC--CC
Confidence 6889999986 89999999888888986 888888777654332 2 222211 122211 122222211 13
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.+.|.
T Consensus 187 g~d~vid~~G~ 197 (280)
T TIGR03366 187 GVDVALEFSGA 197 (280)
T ss_pred CCCEEEECCCC
Confidence 58999999883
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.45 Score=41.09 Aligned_cols=82 Identities=12% Similarity=0.139 Sum_probs=53.8
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH----------HHhC--CCeEEEEEecCCCHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE----------WQSK--GFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~----------~~~~--~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
+|-|.|. |-+|.++++.|+++|.+|.+.+|++++.+++.+. +.+. ..++.++. +.+. .++++++
T Consensus 2 ~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~--vp~~-~~~~v~~ 77 (298)
T TIGR00872 2 QLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVM--VPHG-IVDAVLE 77 (298)
T ss_pred EEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEE--cCch-HHHHHHH
Confidence 4667774 7899999999999999999999999887766532 1110 12333222 3333 6677777
Q ss_pred HHHHHcCCCccEEEECCCC
Q 024125 87 EVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~ 105 (272)
++.... .+=++||++...
T Consensus 78 ~l~~~l-~~g~ivid~st~ 95 (298)
T TIGR00872 78 ELAPTL-EKGDIVIDGGNS 95 (298)
T ss_pred HHHhhC-CCCCEEEECCCC
Confidence 776654 233677776654
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.16 Score=44.01 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=36.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~ 57 (272)
.+.+++|.|+++.+|.++++.....|++|+.++++.++.+.+
T Consensus 140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~ 181 (327)
T PRK10754 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA 181 (327)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 578999999999999999988888899999888887765544
|
|
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.23 Score=44.71 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=35.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~ 57 (272)
.+.+++|+|+++++|.++++.+...|++++.++++.++.+.+
T Consensus 189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~ 230 (398)
T TIGR01751 189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC 230 (398)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 478999999999999999998888899988888777665444
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.18 Score=44.20 Aligned_cols=81 Identities=21% Similarity=0.290 Sum_probs=48.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN- 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 93 (272)
.+++++|+| ++++|.++++.+...|++ |+.+++++++.+.+ +++ +..-. .|..+.+. ..+.+++.+..+
T Consensus 162 ~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~---g~~~v---i~~~~~~~-~~~~~~~~~~~~~ 232 (343)
T cd05285 162 PGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KEL---GATHT---VNVRTEDT-PESAEKIAELLGG 232 (343)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHc---CCcEE---eccccccc-hhHHHHHHHHhCC
Confidence 578999986 589999998888888997 88888887765544 222 22211 12222111 001222222222
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
.++|++++|.|.
T Consensus 233 ~~~d~vld~~g~ 244 (343)
T cd05285 233 KGPDVVIECTGA 244 (343)
T ss_pred CCCCEEEECCCC
Confidence 349999999883
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 272 | ||||
| 1xq1_A | 266 | X-Ray Structure Of Putative Tropinone Reducatse Fro | 6e-85 | ||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 1e-78 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 6e-76 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 6e-76 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 2e-36 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 2e-29 | ||
| 1x1e_A | 239 | Crystal Structure Of Tt0495 Protein From Thermus Th | 2e-29 | ||
| 3awd_A | 260 | Crystal Structure Of Gox2181 Length = 260 | 4e-29 | ||
| 4g81_D | 255 | Crystal Structure Of A Hexonate Dehydrogenase Ortho | 5e-29 | ||
| 1yxm_A | 303 | Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa | 8e-29 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 5e-28 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 5e-28 | ||
| 3o4r_A | 261 | Crystal Structure Of Human DehydrogenaseREDUCTASE ( | 8e-28 | ||
| 4b79_A | 242 | The Aeropath Project And Pseudomonas Aeruginosa Hig | 2e-27 | ||
| 2zat_A | 260 | Crystal Structure Of A Mammalian Reductase Length = | 2e-27 | ||
| 2b4q_A | 276 | Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex | 2e-26 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 2e-26 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 5e-26 | ||
| 1ahi_A | 255 | 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With | 5e-26 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-25 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-25 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-25 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-24 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 5e-24 | ||
| 4afn_A | 269 | Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote | 5e-24 | ||
| 3uf0_A | 273 | Crystal Structure Of A Putative Nad(P) Dependent Gl | 6e-24 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 1e-23 | ||
| 4dc1_A | 281 | Crystal Structure Of Y202f Actinorhodin Polyketide | 2e-23 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 3e-23 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 3e-23 | ||
| 2rh4_A | 277 | Actinorhodin Ketoreductase, Actkr, With Nadph And I | 3e-23 | ||
| 1w4z_A | 281 | Structure Of Actinorhodin Polyketide (Actiii) Reduc | 3e-23 | ||
| 1x7g_A | 261 | Actinorhodin Polyketide Ketoreductase, Act Kr, With | 3e-23 | ||
| 4dbz_A | 281 | Crystal Structure Of V151l Actinorhodin Polyketide | 4e-23 | ||
| 2rhr_B | 277 | P94l Actinorhodin Ketordeuctase Mutant, With Nadph | 4e-23 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 4e-23 | ||
| 3csd_B | 281 | Actinorhodin Polyketide Ketoreductase Mutant P94l B | 5e-23 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 5e-23 | ||
| 2wdz_A | 254 | Crystal Structure Of The Short Chain Dehydrogenase | 7e-23 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 1e-22 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 1e-22 | ||
| 3sju_A | 279 | Hedamycin Polyketide Ketoreductase Bound To Nadph L | 1e-22 | ||
| 3gaf_A | 256 | 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De | 2e-22 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 3e-22 | ||
| 4hp8_A | 247 | Crystal Structure Of A Putative 2-Deoxy-D-Gluconate | 6e-22 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 7e-22 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 7e-22 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 1e-21 | ||
| 3i3o_A | 291 | 2.06 Angstrom Resolution Crystal Structure Of A Sho | 2e-21 | ||
| 2c07_A | 285 | Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng | 2e-21 | ||
| 3gk3_A | 269 | Crystal Structure Of Acetoacetyl-Coa Reductase From | 3e-21 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 4e-21 | ||
| 2d1y_A | 256 | Crystal Structure Of Tt0321 From Thermus Thermophil | 5e-21 | ||
| 1cyd_A | 244 | Carbonyl Reductase Complexed With Nadph And 2-Propa | 9e-21 | ||
| 3ijr_A | 291 | 2.05 Angstrom Resolution Crystal Structure Of A Sho | 1e-20 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 1e-20 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 4e-20 | ||
| 3lyl_A | 247 | Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas | 5e-20 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 6e-20 | ||
| 3ak4_A | 263 | Crystal Structure Of Nadh-Dependent Quinuclidinone | 6e-20 | ||
| 1uzl_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 8e-20 | ||
| 4dqx_A | 277 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 9e-20 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 1e-19 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-19 | ||
| 2ntn_A | 267 | Crystal Structure Of Maba-c60v/g139a/s144l Length = | 2e-19 | ||
| 1uzm_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 3e-19 | ||
| 3ai1_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 3e-19 | ||
| 1iy8_A | 267 | Crystal Structure Of Levodione Reductase Length = 2 | 1e-18 | ||
| 3ai3_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 1e-18 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 2e-18 | ||
| 3d3w_A | 244 | Structure Of L-Xylulose Reductase With Bound Coenzy | 3e-18 | ||
| 2ph3_A | 245 | Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei | 3e-18 | ||
| 4fc6_A | 277 | Studies On Dcr Shed New Light On Peroxisomal Beta-O | 3e-18 | ||
| 1pr9_A | 244 | Human L-Xylulose Reductase Holoenzyme Length = 244 | 3e-18 | ||
| 3d3w_B | 245 | Structure Of L-Xylulose Reductase With Bound Coenzy | 5e-18 | ||
| 1xhl_A | 297 | Crystal Structure Of Putative Tropinone Reductase-I | 6e-18 | ||
| 1edo_A | 244 | The X-Ray Structure Of Beta-Keto Acyl Carrier Prote | 6e-18 | ||
| 1h5q_A | 265 | Mannitol Dehydrogenase From Agaricus Bisporus Lengt | 6e-18 | ||
| 1o5i_A | 249 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 7e-18 | ||
| 3ezl_A | 256 | Crystal Structure Of Acetyacetyl-Coa Reductase From | 7e-18 | ||
| 2zk7_A | 257 | Structure Of A C-Terminal Deletion Mutant Of Thermo | 7e-18 | ||
| 3vtz_A | 269 | Structure Of Thermoplasma Volcanium Aldohexose Dehy | 8e-18 | ||
| 3icc_A | 255 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car | 8e-18 | ||
| 2ew8_A | 249 | Crystal Structure Of The (s)-specific 1-phenylethan | 9e-18 | ||
| 4egf_A | 266 | Crystal Structure Of A L-Xylulose Reductase From My | 9e-18 | ||
| 2q2q_A | 255 | Structure Of D-3-Hydroxybutyrate Dehydrogenase From | 9e-18 | ||
| 2dtd_A | 264 | Structure Of Thermoplasma Acidophilum Aldohexose De | 1e-17 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 1e-17 | ||
| 3v2h_A | 281 | The Crystal Structure Of D-Beta-Hydroxybutyrate Deh | 2e-17 | ||
| 2pd6_A | 264 | Structure Of Human Hydroxysteroid Dehydrogenase Typ | 2e-17 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 2e-17 | ||
| 4iiu_A | 267 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 4e-17 | ||
| 1zjy_A | 251 | Structure Of R-Specific Alcohol Dehydrogenase (Muta | 5e-17 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 5e-17 | ||
| 2cfc_A | 250 | Structural Basis For Stereo Selectivity In The (R)- | 5e-17 | ||
| 1nxq_A | 251 | Crystal Structure Of R-Alcohol Dehydrogenase (Radh) | 5e-17 | ||
| 4dml_A | 269 | 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn | 5e-17 | ||
| 3i4f_A | 264 | Structure Of Putative 3-oxoacyl-reductase From Baci | 6e-17 | ||
| 1rwb_A | 261 | Cooperative Effect Of Two Surface Amino Acid Mutati | 7e-17 | ||
| 3tzq_B | 271 | Crystal Structure Of A Short-Chain Type Dehydrogena | 8e-17 | ||
| 3n74_A | 261 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 9e-17 | ||
| 3o38_A | 266 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 9e-17 | ||
| 3ay6_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 1e-16 | ||
| 1gco_A | 261 | Crystal Structure Of Glucose Dehydrogenase Complexe | 1e-16 | ||
| 1gee_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant Q | 1e-16 | ||
| 3aus_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 1e-16 | ||
| 3ay7_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 1e-16 | ||
| 2yz7_A | 260 | X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F | 1e-16 | ||
| 4fn4_A | 254 | Short-chain Nad(h)-dependent Dehydrogenase/reductas | 2e-16 | ||
| 1w6u_A | 302 | Structure Of Human Decr Ternary Complex Length = 30 | 2e-16 | ||
| 1g6k_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant E | 2e-16 | ||
| 1xkq_A | 280 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 2e-16 | ||
| 1uls_A | 245 | Crystal Structure Of Tt0140 From Thermus Thermophil | 2e-16 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 3e-16 | ||
| 3v2g_A | 271 | Crystal Structure Of A DehydrogenaseREDUCTASE FROM | 3e-16 | ||
| 1nff_A | 260 | Crystal Structure Of Rv2002 Gene Product From Mycob | 5e-16 | ||
| 3oec_A | 317 | Crystal Structure Of Carveol Dehydrogenase From Myc | 6e-16 | ||
| 3u5t_A | 267 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 6e-16 | ||
| 3lf1_A | 265 | Apo Structure Of The Short Chain Oxidoreductase Q9h | 1e-15 | ||
| 3imf_A | 257 | 1.99 Angstrom Resolution Crystal Structure Of A Sho | 1e-15 | ||
| 1doh_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 2e-15 | ||
| 1wmb_A | 260 | Crystal Structure Of Nad Dependent D-3-Hydroxybutyl | 2e-15 | ||
| 1ybv_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 2e-15 | ||
| 1w73_A | 302 | Binary Structure Of Human Decr Solved By Semet Sad. | 3e-15 | ||
| 3un1_A | 260 | Crystal Structure Of An Oxidoreductase From Sinorhi | 3e-15 | ||
| 4imr_A | 275 | Crystal Structure Of 3-oxoacyl (acyl-carrier-protei | 4e-15 | ||
| 3oic_A | 258 | Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl | 4e-15 | ||
| 2ztm_A | 260 | T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L | 5e-15 | ||
| 3ctm_A | 279 | Crystal Structure Of A Carbonyl Reductase From Cand | 5e-15 | ||
| 3afm_A | 258 | Crystal Structure Of Aldose Reductase A1-R Responsi | 6e-15 | ||
| 4eso_A | 255 | Crystal Structure Of A Putative Oxidoreductase Prot | 7e-15 | ||
| 3vc7_A | 254 | Crystal Structure Of A Putative Oxidoreductase From | 7e-15 | ||
| 3uxy_A | 266 | The Crystal Structure Of Short Chain Dehydrogenase | 7e-15 | ||
| 4e3z_A | 272 | Crystal Structure Of A Oxidoreductase From Rhizobiu | 8e-15 | ||
| 2ztu_A | 260 | T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C | 8e-15 | ||
| 3nug_A | 247 | Crystal Structure Of Wild Type Tetrameric Pyridoxal | 8e-15 | ||
| 2hsd_A | 253 | The Refined Three-Dimensional Structure Of 3alpha,2 | 1e-14 | ||
| 3t4x_A | 267 | Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU | 1e-14 | ||
| 1nfr_A | 260 | Rv2002 Gene Product From Mycobacterium Tuberculosis | 2e-14 | ||
| 3svt_A | 281 | Structure Of A Short-Chain Type DehydrogenaseREDUCT | 4e-14 | ||
| 3a28_C | 258 | Crystal Structure Of L-2,3-Butanediol Dehydrogenase | 4e-14 | ||
| 3r3s_A | 294 | Structure Of The Ygha Oxidoreductase From Salmonell | 5e-14 | ||
| 3gdf_A | 267 | Crystal Structure Of The Nadp-Dependent Mannitol De | 5e-14 | ||
| 3ndr_A | 247 | Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro | 7e-14 | ||
| 3u0b_A | 454 | Crystal Structure Of An Oxidoreductase From Mycobac | 7e-14 | ||
| 3q6i_A | 446 | Crystal Structure Of Fabg4 And Coenzyme Binary Comp | 1e-13 | ||
| 3m1l_A | 432 | Crystal Strucutre Of A C-Terminal Trunacted Mutant | 1e-13 | ||
| 4fw8_A | 454 | Crystal Structure Of Fabg4 Complexed With Coenzyme | 1e-13 | ||
| 3v1t_C | 462 | Crystal Structure Of A Putative Ketoacyl Reductase | 1e-13 | ||
| 3tox_A | 280 | Crystal Structure Of A Short Chain Dehydrogenase In | 1e-13 | ||
| 3lls_A | 475 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-13 | ||
| 2z1n_A | 260 | Crystal Structure Of Ape0912 From Aeropyrum Pernix | 1e-13 | ||
| 1hxh_A | 253 | Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D | 2e-13 | ||
| 1hdc_A | 254 | Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste | 2e-13 | ||
| 3is3_A | 270 | Crystal Structure Of 17beta-Hydroxysteroid Dehydrog | 7e-13 | ||
| 1fjh_A | 257 | The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh | 1e-12 | ||
| 4e4y_A | 244 | The Crystal Structure Of A Short Chain Dehydrogenas | 1e-12 | ||
| 2a4k_A | 263 | 3-Oxoacyl-[acyl Carrier Protein] Reductase From The | 1e-12 | ||
| 4e6p_A | 259 | Crystal Structure Of A Probable Sorbitol Dehydrogen | 1e-12 | ||
| 2fwm_X | 250 | Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih | 1e-12 | ||
| 3rkr_A | 262 | Crystal Structure Of A Metagenomic Short-Chain Oxid | 2e-12 | ||
| 3itd_A | 270 | Crystal Structure Of An Inactive 17beta-Hydroxyster | 2e-12 | ||
| 1geg_A | 256 | Cryatal Structure Analysis Of Meso-2,3-Butanediol D | 3e-12 | ||
| 3v8b_A | 283 | Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro | 3e-12 | ||
| 1yde_A | 270 | Crystal Structure Of Human Retinal Short-Chain Dehy | 1e-11 | ||
| 3pgx_A | 280 | Crystal Structure Of A Putative Carveol Dehydrogena | 2e-11 | ||
| 2et6_A | 604 | (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid | 2e-11 | ||
| 3tsc_A | 277 | Crystal Structure Of Short Chain Dehydrogenase Map_ | 5e-11 | ||
| 1so8_A | 261 | Abeta-bound Human Abad Structure [also Known As 3-h | 2e-10 | ||
| 2o23_A | 265 | The Structure Of Wild-Type Human Hadh2 (17beta-Hydr | 2e-10 | ||
| 3ged_A | 247 | Fingerprint And Structural Analysis Of A Apo Scor E | 2e-10 | ||
| 1u7t_A | 261 | Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT | 3e-10 | ||
| 3s55_A | 281 | Crystal Structure Of A Putative Short-Chain Dehydro | 5e-10 | ||
| 3tjr_A | 301 | Crystal Structure Of A Rv0851c Ortholog Short Chain | 5e-10 | ||
| 2dkn_A | 255 | Crystal Structure Of The 3-alpha-hydroxysteroid Deh | 9e-10 | ||
| 4iqg_C | 271 | Crystal Structure Of Bpro0239 Oxidoreductase From P | 1e-09 | ||
| 3edm_A | 259 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 1e-09 | ||
| 3ksu_A | 262 | Crystal Structure Of Short-Chain Dehydrogenase From | 1e-09 | ||
| 2qq5_A | 260 | Crystal Structure Of Human Sdr Family Member 1 Leng | 2e-09 | ||
| 3gvc_A | 277 | Crystal Structure Of Probable Short-Chain Dehydroge | 3e-09 | ||
| 2bgk_A | 278 | X-Ray Structure Of Apo-Secoisolariciresinol Dehydro | 4e-09 | ||
| 3sx2_A | 278 | Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca | 4e-09 | ||
| 1ja9_A | 274 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 6e-09 | ||
| 2ag5_A | 246 | Crystal Structure Of Human Dhrs6 Length = 246 | 6e-09 | ||
| 1p33_A | 289 | Pteridine Reductase From Leishmania Tarentolae Comp | 7e-09 | ||
| 3kzv_A | 254 | The Crystal Structure Of A Cytoplasmic Protein With | 7e-09 | ||
| 1e3s_A | 261 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 1e-08 | ||
| 1e6w_A | 260 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 1e-08 | ||
| 1e3w_A | 261 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 1e-08 | ||
| 4gkb_A | 258 | Crystal Structure Of A Short Chain Dehydrogenase Ho | 1e-08 | ||
| 3ppi_A | 281 | Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas | 2e-08 | ||
| 3oif_A | 266 | Crystal Structure Of Enoyl-Acp Reductases I (Fabi) | 2e-08 | ||
| 2y93_A | 281 | Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2 | 3e-08 | ||
| 1zbq_A | 327 | Crystal Structure Of Human 17-beta-hydroxysteroid D | 4e-08 | ||
| 3bmc_A | 288 | Structure Of Pteridine Reductase 1 (Ptr1) From Tryp | 8e-08 | ||
| 2wd7_A | 268 | Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce | 9e-08 | ||
| 3bmc_B | 288 | Structure Of Pteridine Reductase 1 (Ptr1) From Tryp | 9e-08 | ||
| 1cwu_A | 296 | Brassica Napus Enoyl Acp Reductase A138g Mutant Com | 2e-07 | ||
| 2c7v_A | 268 | Structure Of Trypanosoma Brucei Pteridine Reductase | 3e-07 | ||
| 3jq7_A | 288 | Crystal Structure Of Pteridine Reductase 1 (Ptr1) F | 3e-07 | ||
| 1d7o_A | 297 | Crystal Structure Of Brassica Napus Enoyl Acyl Carr | 3e-07 | ||
| 2bd0_A | 244 | Chlorobium Tepidum Sepiapterin Reductase Complexed | 3e-07 | ||
| 2wd7_B | 268 | Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce | 3e-07 | ||
| 3jq7_B | 288 | Crystal Structure Of Pteridine Reductase 1 (Ptr1) F | 3e-07 | ||
| 1eno_A | 312 | Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLE | 3e-07 | ||
| 3tfo_A | 264 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car | 4e-07 | ||
| 2xox_A | 288 | Crystal Structure Of Pteridine Reductase (Ptr1) Fro | 4e-07 | ||
| 3ioy_A | 319 | Structure Of Putative Short-Chain Dehydrogenase (Sa | 6e-07 | ||
| 3qlj_A | 322 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 7e-07 | ||
| 2ehd_A | 234 | Crystal Structure Analysis Of Oxidoreductase Length | 7e-07 | ||
| 3uce_A | 223 | Crystal Structure Of A Small-Chain Dehydrogenase In | 7e-07 | ||
| 2yw9_A | 261 | Crystal Structure Of Tt0143 From Thermus Thermophil | 8e-07 | ||
| 2qhx_A | 328 | Structure Of Pteridine Reductase From Leishmania Ma | 9e-07 | ||
| 1e7w_A | 291 | One Active Site, Two Modes Of Reduction Correlate T | 1e-06 | ||
| 3nrc_A | 280 | Crystal Stucture Of The Francisella Tularensis Enoy | 1e-06 | ||
| 1bdb_A | 277 | Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From | 1e-06 | ||
| 1e92_A | 288 | Pteridine Reductase 1 From Leishmania Major Complex | 1e-06 | ||
| 1w0c_A | 307 | Inhibition Of Leishmania Major Pteridine Reductase | 1e-06 | ||
| 2jjy_A | 268 | Crystal Structure Of Francisella Tularensis Enoyl R | 1e-06 | ||
| 1qsg_A | 265 | Crystal Structure Of Enoyl Reductase Inhibition By | 1e-06 | ||
| 1ulu_A | 261 | Crystal Structure Of Tt0143 From Thermus Thermophil | 1e-06 | ||
| 1c14_A | 262 | Crystal Structure Of E Coli Enoyl Reductase-nad+-tr | 1e-06 | ||
| 3pjf_A | 270 | Structure Of Enr G93v Mutant-Nad+-Triclosan Complex | 2e-06 | ||
| 1dfg_A | 261 | X-Ray Structure Of Escherichia Coli Enoyl Reductase | 2e-06 | ||
| 3pje_A | 270 | Structure Of Enr G93s Mutant-Nad+-Triclosan Complex | 2e-06 | ||
| 3pjd_A | 270 | Structure Of Enr G93a Mutant-Nad+-Triclosan Complex | 2e-06 | ||
| 4ixt_A | 254 | Structure Of A 37-fold Mutant Of Halohydrin Dehalog | 2e-06 | ||
| 1pwx_A | 254 | Crystal Structure Of The Haloalcohol Dehalogenase H | 2e-06 | ||
| 3rku_A | 287 | Substrate Fingerprint And The Structure Of Nadp+ De | 2e-06 | ||
| 4fs3_A | 256 | Crystal Structure Of Staphylococcus Aureus Enoyl-Ac | 3e-06 | ||
| 1gz6_A | 319 | (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat | 3e-06 | ||
| 3gnt_A | 256 | Crystal Structure Of The Staphylococcus Aureus Enoy | 3e-06 | ||
| 4all_A | 277 | Crystal Structure Of S. Aureus Fabi In Complex With | 3e-06 | ||
| 3gns_A | 260 | Crystal Structure Of The Staphylococcus Aureus Enoy | 4e-06 | ||
| 4h15_A | 261 | Crystal Structure Of A Short Chain Alcohol Dehydrog | 4e-06 | ||
| 4ali_A | 282 | Crystal Structure Of S. Aureus Fabi In Complex With | 4e-06 | ||
| 4bb6_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 4e-06 | ||
| 1mxf_A | 276 | Crystal Structure Of Inhibitor Complex Of Putative | 4e-06 | ||
| 4bb5_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 4e-06 | ||
| 2irw_A | 264 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 5e-06 | ||
| 3pdj_A | 273 | Crystal Structure Of Human 11-Beta-Hydroxysteroid D | 5e-06 | ||
| 1xu7_A | 286 | Crystal Structure Of The Interface Open Conformatio | 5e-06 | ||
| 2rbe_A | 275 | The Discovery Of 2-Anilinothiazolones As 11beta-Hsd | 5e-06 | ||
| 3d5q_A | 272 | Crystal Structure Of 11b-Hsd1 In Complex With Triaz | 5e-06 | ||
| 4hfr_A | 272 | Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In | 5e-06 | ||
| 2ilt_A | 275 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 5e-06 | ||
| 1wma_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Hyd | 6e-06 | ||
| 3ch6_A | 286 | Crystal Structure Of 11beta-Hsd1 Double Mutant (L26 | 6e-06 | ||
| 2bel_A | 283 | Structure Of Human 11-Beta-Hydroxysteroid Dehydroge | 6e-06 | ||
| 1mxh_A | 276 | Crystal Structure Of Substrate Complex Of Putative | 7e-06 | ||
| 4dry_A | 281 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 8e-06 | ||
| 1zmo_A | 244 | Apo Structure Of Haloalcohol Dehalogenase Hhea Of A | 9e-06 | ||
| 3ek2_A | 271 | Crystal Structure Of Eonyl-(Acyl Carrier Protein) R | 1e-05 | ||
| 2ptg_A | 319 | Crystal Structure Of Eimeria Tenella Enoyl Reductas | 1e-05 | ||
| 3u9l_A | 324 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 1e-05 | ||
| 2jap_A | 247 | Clavulanic Acid Dehydrogenase: Structural And Bioch | 2e-05 | ||
| 3t7c_A | 299 | Crystal Structure Of Carveol Dehydrogenase From Myc | 2e-05 | ||
| 3gmd_A | 264 | Structure-Based Design Of 7-Azaindole-Pyrrolidines | 2e-05 | ||
| 3tl3_A | 257 | Structure Of A Short-Chain Type DehydrogenaseREDUCT | 2e-05 | ||
| 1y5m_A | 276 | The Crystal Structure Of Murine 11b-Hydroxysteroid | 2e-05 | ||
| 3i1j_A | 247 | Structure Of A Putative Short Chain Dehydrogenase F | 2e-05 | ||
| 3lz6_A | 263 | Guinea Pig 11beta Hydroxysteroid Dehydrogenase With | 2e-05 | ||
| 3g49_A | 277 | N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b- | 2e-05 | ||
| 3dwf_A | 276 | Crystal Structure Of The Guinea Pig 11beta-Hydroxys | 2e-05 | ||
| 1xse_A | 295 | Crystal Structure Of Guinea Pig 11beta-Hydroxystero | 3e-05 | ||
| 3asu_A | 248 | Crystal Structure Of Serine Dehydrogenase From Esch | 3e-05 | ||
| 2nwq_A | 272 | Short Chain Dehydrogenase From Pseudomonas Aerugino | 3e-05 | ||
| 1xg5_A | 279 | Structure Of Human Putative Dehydrogenase Mgc4172 I | 3e-05 | ||
| 3ucx_A | 264 | The Structure Of A Short Chain Dehydrogenase From M | 4e-05 | ||
| 4da9_A | 280 | Crystal Structure Of Putative Short-Chain Dehydroge | 6e-05 | ||
| 3m1a_A | 281 | The Crystal Structure Of A Short-Chain Dehydrogenas | 7e-05 | ||
| 2p91_A | 285 | Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R | 8e-05 | ||
| 3oml_A | 613 | Structure Of Full-Length Peroxisomal Multifunctiona | 8e-05 | ||
| 2jah_A | 247 | Biochemical And Structural Analysis Of The Clavulan | 9e-05 | ||
| 2pfg_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Big | 1e-04 | ||
| 2gdz_A | 267 | Crystal Structure Of 15-Hydroxyprostaglandin Dehydr | 1e-04 | ||
| 3nyw_A | 250 | Crystal Structure Of A Betaketoacyl-[acp] Reductase | 2e-04 | ||
| 2o2s_A | 315 | The Structure Of T. Gondii Enoyl Acyl Carrier Prote | 2e-04 | ||
| 2qio_A | 256 | X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc | 2e-04 | ||
| 3ojf_A | 257 | Crystal Structure Of The Bacillus Cereus Enoyl-Acyl | 2e-04 | ||
| 1n5d_A | 288 | Crystal Structure Of Porcine Testicular Carbonyl Re | 2e-04 | ||
| 3uve_A | 286 | Crystal Structure Of Carveol Dehydrogenase ((+)-Tra | 2e-04 | ||
| 2hrb_A | 274 | Crystal Structure Of Human Carbonyl Reductase 3, Co | 3e-04 | ||
| 3g1t_A | 258 | Crystal Structure Of Short Chain Dehydrogenase From | 5e-04 | ||
| 3kvo_A | 346 | Crystal Structure Of The Catalytic Domain Of Human | 5e-04 | ||
| 2o50_A | 315 | The Crystal Structure Of Toxoplasma Gondii Enoyl Ac | 7e-04 | ||
| 1uay_A | 242 | Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy | 8e-04 | ||
| 3tpc_A | 257 | Crystal Structure Of A Hypothtical Protein Sma1452 | 9e-04 |
| >pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266 | Back alignment and structure |
|
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239 | Back alignment and structure |
|
| >pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260 | Back alignment and structure |
|
| >pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255 | Back alignment and structure |
|
| >pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261 | Back alignment and structure |
|
| >pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242 | Back alignment and structure |
|
| >pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260 | Back alignment and structure |
|
| >pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269 | Back alignment and structure |
|
| >pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281 | Back alignment and structure |
|
| >pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261 | Back alignment and structure |
|
| >pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279 | Back alignment and structure |
|
| >pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291 | Back alignment and structure |
|
| >pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285 | Back alignment and structure |
|
| >pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256 | Back alignment and structure |
|
| >pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244 | Back alignment and structure |
|
| >pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263 | Back alignment and structure |
|
| >pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267 | Back alignment and structure |
|
| >pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263 | Back alignment and structure |
|
| >pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267 | Back alignment and structure |
|
| >pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244 | Back alignment and structure |
|
| >pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245 | Back alignment and structure |
|
| >pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277 | Back alignment and structure |
|
| >pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244 | Back alignment and structure |
|
| >pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297 | Back alignment and structure |
|
| >pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244 | Back alignment and structure |
|
| >pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265 | Back alignment and structure |
|
| >pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249 | Back alignment and structure |
|
| >pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256 | Back alignment and structure |
|
| >pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257 | Back alignment and structure |
|
| >pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269 | Back alignment and structure |
|
| >pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255 | Back alignment and structure |
|
| >pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249 | Back alignment and structure |
|
| >pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255 | Back alignment and structure |
|
| >pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250 | Back alignment and structure |
|
| >pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251 | Back alignment and structure |
|
| >pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269 | Back alignment and structure |
|
| >pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264 | Back alignment and structure |
|
| >pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261 | Back alignment and structure |
|
| >pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271 | Back alignment and structure |
|
| >pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261 | Back alignment and structure |
|
| >pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269 | Back alignment and structure |
|
| >pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269 | Back alignment and structure |
|
| >pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260 | Back alignment and structure |
|
| >pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254 | Back alignment and structure |
|
| >pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302 | Back alignment and structure |
|
| >pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280 | Back alignment and structure |
|
| >pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271 | Back alignment and structure |
|
| >pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317 | Back alignment and structure |
|
| >pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267 | Back alignment and structure |
|
| >pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265 | Back alignment and structure |
|
| >pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257 | Back alignment and structure |
|
| >pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283 | Back alignment and structure |
|
| >pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302 | Back alignment and structure |
|
| >pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260 | Back alignment and structure |
|
| >pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275 | Back alignment and structure |
|
| >pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258 | Back alignment and structure |
|
| >pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258 | Back alignment and structure |
|
| >pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255 | Back alignment and structure |
|
| >pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254 | Back alignment and structure |
|
| >pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266 | Back alignment and structure |
|
| >pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272 | Back alignment and structure |
|
| >pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260 | Back alignment and structure |
|
| >pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253 | Back alignment and structure |
|
| >pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267 | Back alignment and structure |
|
| >pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281 | Back alignment and structure |
|
| >pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258 | Back alignment and structure |
|
| >pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294 | Back alignment and structure |
|
| >pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267 | Back alignment and structure |
|
| >pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454 | Back alignment and structure |
|
| >pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446 | Back alignment and structure |
|
| >pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432 | Back alignment and structure |
|
| >pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454 | Back alignment and structure |
|
| >pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462 | Back alignment and structure |
|
| >pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475 | Back alignment and structure |
|
| >pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260 | Back alignment and structure |
|
| >pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253 | Back alignment and structure |
|
| >pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254 | Back alignment and structure |
|
| >pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257 | Back alignment and structure |
|
| >pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244 | Back alignment and structure |
|
| >pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263 | Back alignment and structure |
|
| >pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259 | Back alignment and structure |
|
| >pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250 | Back alignment and structure |
|
| >pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262 | Back alignment and structure |
|
| >pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256 | Back alignment and structure |
|
| >pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283 | Back alignment and structure |
|
| >pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270 | Back alignment and structure |
|
| >pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280 | Back alignment and structure |
|
| >pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604 | Back alignment and structure |
|
| >pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277 | Back alignment and structure |
|
| >pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261 | Back alignment and structure |
|
| >pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265 | Back alignment and structure |
|
| >pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261 | Back alignment and structure |
|
| >pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281 | Back alignment and structure |
|
| >pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301 | Back alignment and structure |
|
| >pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255 | Back alignment and structure |
|
| >pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271 | Back alignment and structure |
|
| >pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259 | Back alignment and structure |
|
| >pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262 | Back alignment and structure |
|
| >pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260 | Back alignment and structure |
|
| >pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277 | Back alignment and structure |
|
| >pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278 | Back alignment and structure |
|
| >pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278 | Back alignment and structure |
|
| >pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274 | Back alignment and structure |
|
| >pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246 | Back alignment and structure |
|
| >pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289 | Back alignment and structure |
|
| >pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254 | Back alignment and structure |
|
| >pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261 | Back alignment and structure |
|
| >pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260 | Back alignment and structure |
|
| >pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261 | Back alignment and structure |
|
| >pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258 | Back alignment and structure |
|
| >pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281 | Back alignment and structure |
|
| >pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266 | Back alignment and structure |
|
| >pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281 | Back alignment and structure |
|
| >pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327 | Back alignment and structure |
|
| >pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288 | Back alignment and structure |
|
| >pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268 | Back alignment and structure |
|
| >pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288 | Back alignment and structure |
|
| >pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine Length = 296 | Back alignment and structure |
|
| >pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268 | Back alignment and structure |
|
| >pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288 | Back alignment and structure |
|
| >pdb|1D7O|A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier Protein Reductase Complexed With Nad And Triclosan Length = 297 | Back alignment and structure |
|
| >pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244 | Back alignment and structure |
|
| >pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268 | Back alignment and structure |
|
| >pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288 | Back alignment and structure |
|
| >pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH 8.0 AND Room Temperature Length = 312 | Back alignment and structure |
|
| >pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264 | Back alignment and structure |
|
| >pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288 | Back alignment and structure |
|
| >pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319 | Back alignment and structure |
|
| >pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322 | Back alignment and structure |
|
| >pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234 | Back alignment and structure |
|
| >pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223 | Back alignment and structure |
|
| >pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261 | Back alignment and structure |
|
| >pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328 | Back alignment and structure |
|
| >pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291 | Back alignment and structure |
|
| >pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) In Complex With Nad+ And Triclosan Length = 280 | Back alignment and structure |
|
| >pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277 | Back alignment and structure |
|
| >pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288 | Back alignment and structure |
|
| >pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307 | Back alignment and structure |
|
| >pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl Reductase (Ftfabi) With Bound Nad Length = 268 | Back alignment and structure |
|
| >pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265 | Back alignment and structure |
|
| >pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261 | Back alignment and structure |
|
| >pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262 | Back alignment and structure |
|
| >pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270 | Back alignment and structure |
|
| >pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261 | Back alignment and structure |
|
| >pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270 | Back alignment and structure |
|
| >pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270 | Back alignment and structure |
|
| >pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254 | Back alignment and structure |
|
| >pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254 | Back alignment and structure |
|
| >pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287 | Back alignment and structure |
|
| >pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256 | Back alignment and structure |
|
| >pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319 | Back alignment and structure |
|
| >pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256 | Back alignment and structure |
|
| >pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277 | Back alignment and structure |
|
| >pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260 | Back alignment and structure |
|
| >pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261 | Back alignment and structure |
|
| >pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282 | Back alignment and structure |
|
| >pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276 | Back alignment and structure |
|
| >pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264 | Back alignment and structure |
|
| >pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286 | Back alignment and structure |
|
| >pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275 | Back alignment and structure |
|
| >pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272 | Back alignment and structure |
|
| >pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276 | Back alignment and structure |
|
| >pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286 | Back alignment and structure |
|
| >pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283 | Back alignment and structure |
|
| >pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276 | Back alignment and structure |
|
| >pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of Arthrobacter Sp. Ad2 Length = 244 | Back alignment and structure |
|
| >pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein) Reductase From Burkholderia Pseudomallei 1719b Length = 271 | Back alignment and structure |
|
| >pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319 | Back alignment and structure |
|
| >pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324 | Back alignment and structure |
|
| >pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247 | Back alignment and structure |
|
| >pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299 | Back alignment and structure |
|
| >pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264 | Back alignment and structure |
|
| >pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257 | Back alignment and structure |
|
| >pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276 | Back alignment and structure |
|
| >pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247 | Back alignment and structure |
|
| >pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263 | Back alignment and structure |
|
| >pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277 | Back alignment and structure |
|
| >pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276 | Back alignment and structure |
|
| >pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295 | Back alignment and structure |
|
| >pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248 | Back alignment and structure |
|
| >pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272 | Back alignment and structure |
|
| >pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279 | Back alignment and structure |
|
| >pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264 | Back alignment and structure |
|
| >pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281 | Back alignment and structure |
|
| >pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285 | Back alignment and structure |
|
| >pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613 | Back alignment and structure |
|
| >pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247 | Back alignment and structure |
|
| >pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276 | Back alignment and structure |
|
| >pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267 | Back alignment and structure |
|
| >pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250 | Back alignment and structure |
|
| >pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315 | Back alignment and structure |
|
| >pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256 | Back alignment and structure |
|
| >pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257 | Back alignment and structure |
|
| >pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288 | Back alignment and structure |
|
| >pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286 | Back alignment and structure |
|
| >pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274 | Back alignment and structure |
|
| >pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258 | Back alignment and structure |
|
| >pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346 | Back alignment and structure |
|
| >pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315 | Back alignment and structure |
|
| >pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242 | Back alignment and structure |
|
| >pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 412 bits (1061), Expect = e-147
Identities = 154/272 (56%), Positives = 198/272 (72%), Gaps = 8/272 (2%)
Query: 1 MANAESS----FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56
M ++ S RWSLKG TALVTGG++GIG A VEELAGLGA V+TCSRNE EL++
Sbjct: 1 MEESKVSMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE 60
Query: 57 CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA 116
CL+ W+ KG V GSVCD S +R+KL+Q V F+GKLNILVNN G I K +++
Sbjct: 61 CLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTE 120
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176
++Y+ IM TNFE+ YHL Q+ YPLLKAS G+++F+SS+ G S + S S+Y A+K A+NQ
Sbjct: 121 KDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQ 180
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQRVGEPEE 232
+T++LACEWAKDNIR NSVAP T LVE ++ KE +D I +TP+ R G+P+E
Sbjct: 181 MTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQE 240
Query: 233 VASLVAYLCLPAASYITGQIISVDGGFTANGF 264
V++L+A+LC PAASYITGQII DGGFTANG
Sbjct: 241 VSALIAFLCFPAASYITGQIIWADGGFTANGG 272
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 411 bits (1060), Expect = e-147
Identities = 163/264 (61%), Positives = 198/264 (75%), Gaps = 4/264 (1%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA AE S RWSLK T LVTGGT+GIG A VEE AG GAV+HTC+RNE ELN+CL +
Sbjct: 1 MAGAEQS---QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK 57
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ KGF V+GSVCDA+ +REKL+Q V S F GKL+IL+NN+G KPT++Y+AE++S
Sbjct: 58 WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS 117
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
++TN ES YHL QL +PLLKASG G+I+F+SS+ G+ GSIY ATK A+NQL RN
Sbjct: 118 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARN 177
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LACEWA D IR N+VAP T L E + +++ F VI+R PL R GEPEEV+SLVA+L
Sbjct: 178 LACEWASDGIRANAVAPAVIATPLAEAVYDDE-FKKVVISRKPLGRFGEPEEVSSLVAFL 236
Query: 241 CLPAASYITGQIISVDGGFTANGF 264
C+PAASYITGQ I VDGG T NGF
Sbjct: 237 CMPAASYITGQTICVDGGLTVNGF 260
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 407 bits (1048), Expect = e-145
Identities = 149/257 (57%), Positives = 189/257 (73%), Gaps = 3/257 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ RW+L+G TALVTGG+RGIG VEELA LGA V+TCSRN+ ELN CL +W+SKGF V
Sbjct: 2 AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 61
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
SVCD +S +R++L+ V + F+GKLNILVNN G I K +Y+ E+YS IM+ NFE+
Sbjct: 62 ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEA 121
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
YHL L +P LKAS G++VFISSV G V ++YGATK AM+QLTR LA EWAKDN
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 181
Query: 190 IRTNSVAPWYTKTSLVERLLEN---KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
IR N V P TSLVE +++ KE ++K+I R L+R+GEP+E+A++VA+LC PAAS
Sbjct: 182 IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAAS 241
Query: 247 YITGQIISVDGGFTANG 263
Y+TGQII VDGG AN
Sbjct: 242 YVTGQIIYVDGGLMANC 258
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 275 bits (706), Expect = 2e-93
Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 2/258 (0%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK 64
S+ R L+ ALVT T GIG A LA GA V SR + +++ + Q +
Sbjct: 2 ASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE 61
Query: 65 GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIM 123
G V+G+VC + RE+L+ + G ++ILV+N N I+ + E + KI+
Sbjct: 62 GLSVTGTVCHVGKAEDRERLVAMAVNLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKIL 120
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
N ++T + + V P ++ G GS++ +SSVG + Y +K A+ LT+NLA
Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 180
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
E A NIR N +AP KT+ + L +K + + ++R+G PE+ A +V++LC
Sbjct: 181 ELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 240
Query: 244 AASYITGQIISVDGGFTA 261
ASYITG+ + V GG +
Sbjct: 241 DASYITGETVVVGGGTAS 258
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 268 bits (688), Expect = 2e-90
Identities = 75/254 (29%), Positives = 119/254 (46%), Gaps = 5/254 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC---LKEWQSKGFVVSG 70
S + T LVTGG GIG+ L GA V RN +L L+ + G +
Sbjct: 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFES 129
D + D+ + + V + G+L+ +V+ G + P + +E + + + N
Sbjct: 68 EPTDITNEDETARAVDAVTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNG 126
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
T ++ + + G GS V ISS+ + YG TK+A++ L + A E
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASW 186
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
+R NS+ P +T LV + E+ E TPL R GE E+VA++ +L AAS++T
Sbjct: 187 VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVT 246
Query: 250 GQIISVDGGFTANG 263
GQ+I+VDGG
Sbjct: 247 GQVINVDGGQMLRR 260
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 261 bits (670), Expect = 3e-88
Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 14/252 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ G+ ALVTG +GIG+ TV+ L GA V +R +L KE +
Sbjct: 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----CPGIEPVCV 59
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D D EK + +G +++LVNN I +P +E + E + + + N S + +
Sbjct: 60 DLGDWDATEKALGGIG-----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 114
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEWAKDNI 190
Q+V + GV GSIV +SS+ ++HV + Y +TK AM LT+ +A E I
Sbjct: 115 SQMVARDMINRGVPGSIVNVSSM--VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 172
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
R NSV P T + +++ + EF K+ R PL++ E E+V + + +L ++ +G
Sbjct: 173 RVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSG 232
Query: 251 QIISVDGGFTAN 262
I VD G+ A+
Sbjct: 233 GGILVDAGYLAS 244
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 260 bits (668), Expect = 6e-88
Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 14/251 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G LVTG +GIG+ TV+ L GA V SR + +L+ ++E +
Sbjct: 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCV 59
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + E+ + VG +++LVNN + +P +E + E + + N + +
Sbjct: 60 DLGDWEATERALGSVG-----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEWAKDNI 190
Q+V L A GV G+IV +SS S + S+Y +TK A++ LT+ +A E I
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQ--CSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI 172
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
R N+V P TS+ + + ++ R PL + E E V + + +L + TG
Sbjct: 173 RVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG 232
Query: 251 QIISVDGGFTA 261
+ V+GGF A
Sbjct: 233 STLPVEGGFWA 243
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 260 bits (668), Expect = 7e-88
Identities = 88/253 (34%), Positives = 133/253 (52%), Gaps = 8/253 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L A+VTGG + IG A V LA GA V +E K +++ + +G VS V
Sbjct: 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFESTYH 132
D + + + ++ V + G+++ILV G I + + + ++ K + N +
Sbjct: 70 DVTNTESVQNAVRSVHEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFR 128
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKD 188
CQ V ++ G IV I S+ G + + Y A+KA ++Q R+LA EWA
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSG--LIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPH 186
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
IR N+VAP Y +T+L +E E D IA TP+ RVG+P+EVAS+V +L AAS +
Sbjct: 187 GIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLM 246
Query: 249 TGQIISVDGGFTA 261
TG I++VD GFT
Sbjct: 247 TGAIVNVDAGFTV 259
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 257 bits (659), Expect = 2e-86
Identities = 90/265 (33%), Positives = 145/265 (54%), Gaps = 9/265 (3%)
Query: 3 NAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62
+ + L+G ALVTGG+RG+G + LA G V SRN E ++ ++
Sbjct: 7 HHHHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLT 66
Query: 63 SK-GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
K G CD ++ ++ +KL++ V KF GKL+ +VN G N R P E+ +E+ +
Sbjct: 67 EKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQ 125
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV----GGLSHVGSGSIYGATKAAMNQL 177
++ N TY++C+ + LL+ S SI+ I S+ + ++ + Y A+K + L
Sbjct: 126 VIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISA---YAASKGGVASL 182
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLV 237
T+ LA EW + IR N +AP + +T + E + + E +D ++ R PL R G PE++ +
Sbjct: 183 TKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVA 242
Query: 238 AYLCLPAASYITGQIISVDGGFTAN 262
+L A Y+TGQII VDGG+TAN
Sbjct: 243 VFLASEEAKYVTGQIIFVDGGWTAN 267
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 257 bits (659), Expect = 3e-86
Identities = 84/256 (32%), Positives = 128/256 (50%), Gaps = 7/256 (2%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+SL G ALVTGG+RGIGQ + L GA V C+R+ + G +
Sbjct: 22 HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQA 81
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D +S +L Q +G +L+ILVNN GT+ Y + K+M N S
Sbjct: 82 -IPADLSSEAGARRLAQALGELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTS 139
Query: 130 TYHLCQLVYPLLKASGV----GSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACE 184
+ Q + PLL+ S ++ I SV G+S +G + YG +KAA++QL+R LA E
Sbjct: 140 VFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKE 199
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
++I N +AP + + + + + ++ A P+ R G PEE+A+L L A
Sbjct: 200 LVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTA 259
Query: 245 ASYITGQIISVDGGFT 260
+Y+TG +I +DGGF
Sbjct: 260 GAYMTGNVIPIDGGFH 275
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 255 bits (655), Expect = 6e-86
Identities = 86/251 (34%), Positives = 125/251 (49%), Gaps = 6/251 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G TALVTG RG+G A E LA GA V L + + KG+ G
Sbjct: 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D E ++ ++ ++IL+NN G RKP +E E + K++ TN S + +
Sbjct: 66 DVTDELAIEAAFSKLDAEG-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLV 124
Query: 134 CQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNI 190
+ + A G I+ I S+ S ++ Y A K + LT ++A EWA+ NI
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSL--TSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
+TN++ P Y T + L+E+K+F V + TP QR G PEE+ +L A+ YI G
Sbjct: 183 QTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYING 242
Query: 251 QIISVDGGFTA 261
QII VDGG+ A
Sbjct: 243 QIIYVDGGWLA 253
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 255 bits (655), Expect = 9e-86
Identities = 77/250 (30%), Positives = 116/250 (46%), Gaps = 3/250 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-WQSKGFVVSGSV 72
L G AL+TG T+GIG A GA + R+ EL+ + + G V
Sbjct: 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D A PD +L + F G L++LVNN G + +P ++ + + + N +
Sbjct: 77 IDLAEPDAPAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPAL 135
Query: 133 LCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
L V ++ A G+I+ ++S L+ + Y +KA + T+ LA E IR
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
NSV P T + +R+ ++ +IAR PL R P EV+ V +L AAS I G
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGV 255
Query: 252 IISVDGGFTA 261
I VDGG+T
Sbjct: 256 DIPVDGGYTM 265
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 253 bits (649), Expect = 5e-85
Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 10/252 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G A VTG GIG A GA + R L++ +E V + V
Sbjct: 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE--LGAAVAARIVA 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + E ++ILVN+ G +E + ++M N + +
Sbjct: 66 DVTDAEAMTAAAAEA-EAV-APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWA 123
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDN 189
+ + A G G+IV + S+ + + Y A+K A++QLTR LA EWA
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSM--SGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRG 181
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
+R N++AP Y T + ++ E E + + TP+ R GEP E+A+ +L PAASY+T
Sbjct: 182 VRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVT 241
Query: 250 GQIISVDGGFTA 261
G I++VDGG+T
Sbjct: 242 GAILAVDGGYTV 253
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 251 bits (644), Expect = 6e-84
Identities = 82/251 (32%), Positives = 127/251 (50%), Gaps = 7/251 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL G TA+VTG GIG+A A GA V R + + + E G V
Sbjct: 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVA 86
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A + + +E+ + ++++LVNN G R P E S + +++T N ++ + L
Sbjct: 87 DLADLEGAANVAEELAA--TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVL 144
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNIR 191
+ + A G G IV I+S+ LS G ++ Y A+K A+ LTR LA EWA +
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASM--LSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVG 202
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N++AP Y T+ L + E ++ AR P R PE++ +L AASY+ GQ
Sbjct: 203 VNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQ 262
Query: 252 IISVDGGFTAN 262
+++VDGG+ A+
Sbjct: 263 VLAVDGGWLAS 273
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 252 bits (646), Expect = 8e-84
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 8/255 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
S +G A +TGG G+G+ L+ LGA SR L ++ S+ G V
Sbjct: 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD PD + + E+ G NI++NN N PT S + I T
Sbjct: 83 CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 141
Query: 133 LCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDN 189
+ + L+KA + + I+++ + GSG + + KA + ++++LA EW K
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTI--YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYG 199
Query: 190 IRTNSVAPWYTKTSLV-ERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
+R N + P KT RL F ++I R P R+G EE+A+L A+LC AS+I
Sbjct: 200 MRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWI 259
Query: 249 TGQIISVDGGFTANG 263
G +I DGG
Sbjct: 260 NGAVIKFDGGEEVLI 274
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 8e-84
Identities = 83/254 (32%), Positives = 131/254 (51%), Gaps = 3/254 (1%)
Query: 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV 67
F S L G A++TG GIG+ A GA V N N + E Q G
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
CD S + L SK GK++ILVNN G KP + ++ + N
Sbjct: 62 AFACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNV 119
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S +HL QLV P ++ +G G I+ I+S+ + + + Y ++KAA + L RN+A + +
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
NIR N +AP T ++ ++ E K++ TP++R+G+P+++A+ +LC PAAS+
Sbjct: 180 KNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW 238
Query: 248 ITGQIISVDGGFTA 261
++GQI++V GG
Sbjct: 239 VSGQILTVSGGGVQ 252
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 246 bits (631), Expect = 2e-82
Identities = 86/247 (34%), Positives = 124/247 (50%), Gaps = 16/247 (6%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTGG+RGIG+A E L G V SRN E ++ D
Sbjct: 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA--------AQSLGAVPLPTDL-EK 54
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
D + L++ G L++LV+ N+RKP +E S EE+ +++ + + + L Q
Sbjct: 55 DDPKGLVKRALEAL-GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDNIRTNS 194
P + +G G ++FI SV + G + Y K A+ LTR LA EWA+ IR N
Sbjct: 114 PHMAEAGWGRVLFIGSV--TTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNL 171
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
+ P Y +T L +N E + + AR P+ R PEE+A + A LC A Y+TGQ ++
Sbjct: 172 LCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVA 231
Query: 255 VDGGFTA 261
VDGGF A
Sbjct: 232 VDGGFLA 238
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 246 bits (630), Expect = 5e-82
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 12/259 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
+ G A++TG + GIG A E A GA + +R L++ + + K G V
Sbjct: 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D A+P+ + +++ V S F G +ILVNN GT + +E + E++ +
Sbjct: 64 VDVATPEGVDAVVESVRSSF-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVR 122
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L + + P ++A G G+I+ +S+ + + IY TKAA+ ++ LA E KDNIR
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRV 182
Query: 193 NSVAPWYTKTSLVERLLENK----------EFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
N + P T + + P++R PEE+A+ +LC
Sbjct: 183 NCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCS 242
Query: 243 PAASYITGQIISVDGGFTA 261
A+Y G VDGG
Sbjct: 243 ERATYSVGSAYFVDGGMLK 261
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 244 bits (626), Expect = 4e-81
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 5/267 (1%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
+ F L+ A +TGG GIG E G SR+ + ++
Sbjct: 13 LPAYRHLFCPD--LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARK 70
Query: 61 -WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+ G D +P + + +F G+++IL+N N P S +
Sbjct: 71 LAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF-GRIDILINCAAGNFLCPAGALSFNAF 129
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
+M + T+++ +++Y G IV I++ G G+ KAA++ +TR
Sbjct: 130 KTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTR 189
Query: 180 NLACEWAKDNIRTNSVAPWYTKTS-LVERLLENKEFVDKVIARTPLQRVGEPEEVASLVA 238
+LA EW NIR NS+AP + + RL + + + +PLQR+G E+A V
Sbjct: 190 HLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVL 249
Query: 239 YLCLPAASYITGQIISVDGGFTANGFN 265
YL P ASY+TG ++ DGG N
Sbjct: 250 YLASPLASYVTGAVLVADGGAWLTFPN 276
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 244 bits (624), Expect = 4e-81
Identities = 71/262 (27%), Positives = 108/262 (41%), Gaps = 13/262 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE--WQSKGFVVSGS 71
L A+VTGG+ GIG ATVE L GA V C+R+ L + G + S
Sbjct: 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCD Q + G +ILVNN G E + E +S+ + F S
Sbjct: 65 VCDVLDALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVI 123
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
H + P L++ +IV ++S+ A +A + L R++A E+A +R
Sbjct: 124 HPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVR 183
Query: 192 TNSVAPWYTKTSLVERLLEN----------KEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
N + ++ R E + PL R+G+P E A + +L
Sbjct: 184 VNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLA 243
Query: 242 LPAASYITGQIISVDGGFTANG 263
P ++Y TG I V GG + +
Sbjct: 244 SPLSAYTTGSHIDVSGGLSRHA 265
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 242 bits (621), Expect = 9e-81
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
++K ++TGG+ G+G+ A GA V R + +L + E + +
Sbjct: 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQM 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + D +K+I+++ KF G+++IL+NN N P + S ++ ++ T++
Sbjct: 63 DVRNTDDIQKMIEQIDEKF-GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYC 121
Query: 134 CQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA-KDNIR 191
Q + ++ G+I+ + + A KA + +T+ LA EW K IR
Sbjct: 122 SQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIR 181
Query: 192 TNSVAPWYTKTSLV-ERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
N++AP + + ++L ++E + I PL R+G PEE+A L YLC A+YI G
Sbjct: 182 VNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYING 241
Query: 251 QIISVDGGFTANGF 264
+++DGG + +
Sbjct: 242 TCMTMDGGQHLHQY 255
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 242 bits (620), Expect = 2e-80
Identities = 80/252 (31%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G AL+TG + GIG+ A GA V +R+ L E G C
Sbjct: 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D PDQ ++ ++ + G ++I V N G + ++ EE+ +I TN +
Sbjct: 89 DVTQPDQVRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLT 147
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVGSG---SIYGATKAAMNQLTRNLACEWAKDN 189
Q + G+ G+I+ +S+ G + S Y +KAA+ LT+ +A E A
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHI-INIPQQVSHYCTSKAAVVHLTKAMAVELAPHQ 206
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
IR NSV+P Y +T LVE L + + PL R+G PEE+ L YL A+SY+T
Sbjct: 207 IRVNSVSPGYIRTELVEPLADYHA---LWEPKIPLGRMGRPEELTGLYLYLASAASSYMT 263
Query: 250 GQIISVDGGFTA 261
G I +DGG+T
Sbjct: 264 GSDIVIDGGYTC 275
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 242 bits (620), Expect = 5e-80
Identities = 86/259 (33%), Positives = 126/259 (48%), Gaps = 9/259 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-----WQSKGFVV 68
L+G A+VTGG GIG+A V+EL LG+ V SR L E +K V
Sbjct: 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
C+ + ++ L++ F GK+N LVNN G P S++ + ++ TN
Sbjct: 75 IPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
T+++C+ VY GSIV I + GA +A + LT++LA EWA
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVH-SGAARAGVYNLTKSLALEWACS 192
Query: 189 NIRTNSVAPWYTKTSLVERLLE--NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
IR N VAP + + F + + P +R+G PEEV+S+V +L PAAS
Sbjct: 193 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAAS 252
Query: 247 YITGQIISVDGGFTANGFN 265
+ITGQ + VDGG + +
Sbjct: 253 FITGQSVDVDGGRSLYTHS 271
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 240 bits (616), Expect = 5e-80
Identities = 79/252 (31%), Positives = 124/252 (49%), Gaps = 3/252 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
S + L A+VTG GIG+A A GA V + G
Sbjct: 5 ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAI 64
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
G C+ RE +I+ +F GK+ +LVNN G + ++ N S
Sbjct: 65 GLECNVTDEQHREAVIKAALDQF-GKITVLVNNAGGG-GPKPFDMPMSDFEWAFKLNLFS 122
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ L QL P ++ +G G+I+ ISS+ G + + YG++KAA+N LTRN+A +
Sbjct: 123 LFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMG 182
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
IR N++AP KT + +L E ++ TPL R+GE +++A+ +LC PAA++I+
Sbjct: 183 IRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWIS 241
Query: 250 GQIISVDGGFTA 261
GQ+++V GG
Sbjct: 242 GQVLTVSGGGVQ 253
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 240 bits (615), Expect = 2e-79
Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 10/265 (3%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
+ F+S L +VTGG GIG+AT E A GA V NE + E
Sbjct: 13 LGTENLYFQSMD--LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE 70
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
SK F V D +S E ++++ +K+ G++++LVNN G + E +
Sbjct: 71 IGSKAFGV---RVDVSSAKDAESMVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWD 126
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+IM+ N + + + V P+++ +G GSI+ +S S + + Y A+K A++ LTR
Sbjct: 127 RIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRA 186
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENK----EFVDKVIARTPLQRVGEPEEVASL 236
+A + AK+ IR N+VAP + ++ + AR + R+G EE+A
Sbjct: 187 MAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEA 246
Query: 237 VAYLCLPAASYITGQIISVDGGFTA 261
+ +L + + TG I++VDGG +
Sbjct: 247 MLFLASDRSRFATGSILTVDGGSSI 271
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 239 bits (612), Expect = 3e-79
Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 12/254 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L +++G +G A GA + +R L K+ G D
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHL 133
Q L+ E + G++++++NN KP + E + L
Sbjct: 69 ITDDAQVAHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q P L+ S G++V ++S+ Y K+A+ +++ LA E + IR N
Sbjct: 128 IQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186
Query: 194 SVAPWYTKTSLVERLLENK---------EFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
SV P Y ++ E++ + + A + L+R+ +EVAS + ++
Sbjct: 187 SVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL 246
Query: 245 ASYITGQIISVDGG 258
AS ITGQ + V+ G
Sbjct: 247 ASGITGQALDVNCG 260
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 238 bits (609), Expect = 1e-78
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 10/252 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLKG A VTG + GIG A E A GA V + K ++ G C
Sbjct: 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFESTY 131
+ + P E+ I + F G +++ V N G + + + ++KI++ + Y
Sbjct: 91 NISDPKSVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVY 149
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG---SIYGATKAAMNQLTRNLACEWAKD 188
+ + + K +G GS++ SS+ G V + Y KAA L ++LA EWA
Sbjct: 150 YCSHNIGKIFKKNGKGSLIITSSISGKI-VNIPQLQAPYNTAKAACTHLAKSLAIEWAP- 207
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
R N+++P Y T + + + + K TPL R G +E+ YL A+++
Sbjct: 208 FARVNTISPGYIDTDITDFASK--DMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFT 265
Query: 249 TGQIISVDGGFT 260
TG + +DGG+T
Sbjct: 266 TGSDVVIDGGYT 277
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 236 bits (606), Expect = 2e-78
Identities = 71/249 (28%), Positives = 112/249 (44%), Gaps = 5/249 (2%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-WQSKGFVVSGSVCDA 75
A+VTG + G G A G V + L + + W + V D
Sbjct: 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVG---TNIRKPTIEYSAEEYSKIMTTNFESTYH 132
A I +F G +++LVNN G + E++ K+M N +
Sbjct: 62 ADEGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
C+ V P + G G IV I+SV L S Y +K A+ QLT+++A ++A IR
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N+V P +T + + L+ E D+V+AR P + +G +VA V +L A+Y+ G
Sbjct: 181 NAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAA 240
Query: 253 ISVDGGFTA 261
+ +DG +TA
Sbjct: 241 LVMDGAYTA 249
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 235 bits (602), Expect = 4e-78
Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 23/257 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
S LVTGG++GIG+A VE L + +
Sbjct: 1 SNAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF---------SAENLKFIKA 51
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D ++ + K + + N G I+ + E K++ N S+ +
Sbjct: 52 DLTKQQDITNVLDII--KN-VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYF 108
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ + LK SIVF S + Y +K A+ Q+T++LA + AK IR N
Sbjct: 109 IKGLENNLKVGA--SIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVN 166
Query: 194 SVAPWYTKTSLVERLLENK---------EFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
+V P T L L++ E + PL R+ +P+E+A LV +L
Sbjct: 167 TVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK 226
Query: 245 ASYITGQIISVDGGFTA 261
+ ++TG +I +DGG+TA
Sbjct: 227 SKFMTGGLIPIDGGYTA 243
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 236 bits (605), Expect = 5e-78
Identities = 66/252 (26%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A+VTG GIG A LA G V + + + G + D
Sbjct: 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVD 83
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ Q ++ + F G ++ LV N G I+ + E++ +++ N +
Sbjct: 84 VSDEQQIIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCT 142
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P + G G+IV +SS+ G VG YG +KA + QL+R A E IR+N+
Sbjct: 143 KHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNT 202
Query: 195 VAPWYTKTSLVERLLEN-----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
+ P + T + + + + + R+ PEE+A +V +L AS IT
Sbjct: 203 LLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMIT 262
Query: 250 GQIISVDGGFTA 261
G DGG A
Sbjct: 263 GTTQIADGGTIA 274
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 235 bits (602), Expect = 7e-78
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 4/251 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLK +VTG GIG+A ++ A ++V E LN+ ++E + G V G
Sbjct: 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + E+ ++ + ++++L NN G + P E S E + +++ N S ++
Sbjct: 64 DVSKKKDVEEFVRRTFETY-SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ V P++ G G IV +S+ G+ +G+ Y K + LTR++A + IR
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182
Query: 193 NSVAPWYTKTSLVERLLENKE--FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
+V P KT++ + E + R+ EPE++A+++ +L AS++ G
Sbjct: 183 VAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNG 242
Query: 251 QIISVDGGFTA 261
+ VDGG T
Sbjct: 243 DAVVVDGGLTV 253
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 235 bits (601), Expect = 1e-77
Identities = 79/257 (30%), Positives = 117/257 (45%), Gaps = 11/257 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G LVTGG RGIG+A + A GA+V C E + + F D
Sbjct: 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP-EGKEVAEAIGGAFFQ-----VD 57
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+R + ++E G++++LVNN + E+ +++ N + HL
Sbjct: 58 LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
L ++ G G+IV ++SV GL + Y A+K + LTR+LA + A IR N+
Sbjct: 117 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176
Query: 195 VAPWYTKTSLVERLLENK----EFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
VAP T V + L+R+G+PEEVA V +L AS+ITG
Sbjct: 177 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 236
Query: 251 QIISVDGGFTANGFNPG 267
I+ VDGG TA+ G
Sbjct: 237 AILPVDGGMTASFMMAG 253
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 234 bits (600), Expect = 3e-77
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 18/263 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGS 71
A++TG + GIG+AT A GA V R+ L + ++ + G V+
Sbjct: 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNF 127
V D + +++++ KF GKL+ILVNN G + K S E Y + N
Sbjct: 64 VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSV-GGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
S L + P L ++ G IV ISS+ GL Y KAA++Q TRN A +
Sbjct: 123 RSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKE-------FVDKVIARTPLQRVGEPEEVASLVAY 239
+ IR NS++P T + +E + + P +G+P+++A ++A+
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 241
Query: 240 LCL-PAASYITGQIISVDGGFTA 261
L +SYI G + VDGG +
Sbjct: 242 LADRKTSSYIIGHQLVVDGGSSL 264
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 234 bits (600), Expect = 4e-77
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 11/259 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ AL+TG GIG+AT LA G V R E+ + E G
Sbjct: 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + Q ++++ KF G L+I+V N G + P + E+ + + N T+
Sbjct: 85 DVSDELQMRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFL 143
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYGATKAAMNQLTRNLACEWAKDNI 190
L P LK G G+IV +SS+ G + + Y ATKAA + + LA E K +I
Sbjct: 144 TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIART-------PLQRVGEPEEVASLVAYLCLP 243
R N+V P +T++ + E + + G E+VA L+ +L
Sbjct: 204 RVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSE 263
Query: 244 AASYITGQIISVDGGFTAN 262
A ++TG + +DGG
Sbjct: 264 RARHVTGSPVWIDGGQGLL 282
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 233 bits (597), Expect = 7e-77
Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 7/251 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+ A++TG GIG T LA GA V E +L G V D
Sbjct: 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS---VGRGAVHHVVD 65
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK--PTIEYSAEEYSKIMTTNFESTYH 132
+ LI F G+L+I+ NN + + + + + T N T
Sbjct: 66 LTNEVSVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+C+ P L ++G G+IV ISS + + Y TKAA+ LTR +A ++ + +R
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N++AP +T +E L + VD R+GEP E+A LV +L A++ITGQ+
Sbjct: 185 NAIAPGLVRTPRLEVGLP-QPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQV 243
Query: 253 ISVDGGFTANG 263
I+ D G A+
Sbjct: 244 IAADSGLLAHL 254
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 9e-77
Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 12/262 (4%)
Query: 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFV 67
S T +VTGG RGIG A +A GA V R+ + + ++ + G
Sbjct: 6 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK 65
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
CD ++ D K IQ++ + G ++ L+ N G ++ KP E + E+++ + N
Sbjct: 66 TKAYQCDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNV 124
Query: 128 ESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI-------YGATKAAMNQLTR 179
++ C+ V L+ GSIV SS+ S Y ++KAA + L +
Sbjct: 125 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 184
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
LA EWA IR N+++P Y T + + + D + PL R +PEE+
Sbjct: 185 GLAAEWASAGIRVNALSPGYVNTDQTAHMDK--KIRDHQASNIPLNRFAQPEEMTGQAIL 242
Query: 240 LCLPAASYITGQIISVDGGFTA 261
L A+Y+TG +DGG
Sbjct: 243 LLSDHATYMTGGEYFIDGGQLI 264
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 232 bits (595), Expect = 1e-76
Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 21/256 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
A+VTGG+ GIG A V+ L GA V + S +E ++ D
Sbjct: 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ ++ ++ +++ K+ G+++ILVNN G P E + +I+ N +Y +
Sbjct: 62 VTNEEEVKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMA 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P++ A G GSI+ I+SV + + + Y +K A+ LTR++A ++A IR N+
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNA 179
Query: 195 VAPWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
V P T +V + + + +++ + P+ R+G PEEVA +VA+L +
Sbjct: 180 VCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRS 239
Query: 246 SYITGQIISVDGGFTA 261
S+ITG ++VDGG +
Sbjct: 240 SFITGACLTVDGGLLS 255
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 1e-76
Identities = 74/252 (29%), Positives = 106/252 (42%), Gaps = 5/252 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G A+VTG + GIG+A A GA V +RN L + E G + D
Sbjct: 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHL 133
E L++ +F G L+ NN G S E + + + TN S +
Sbjct: 66 VGDEALHEALVELAVRRF-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLA 124
Query: 134 CQLVYPLLKASGVGSIVFISSV-GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ P + A G GS+ F SS G + + Y A+KA + L + LA E IR
Sbjct: 125 AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRV 184
Query: 193 NSVAPWYTKTSLVERLLE--NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
N++ P T T L E V L+R+ PEE+A YL AS++TG
Sbjct: 185 NALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTG 244
Query: 251 QIISVDGGFTAN 262
+ DGG +
Sbjct: 245 AALLADGGASVT 256
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 232 bits (594), Expect = 2e-76
Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 2 ANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61
E+ + S +G ALVTG GIG A V L GA V R + L
Sbjct: 13 LGTENLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL--- 69
Query: 62 QSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
D + L V + G+L+I+VNN G R E + ++S
Sbjct: 70 --------HLPGDLREAAYADGLPGAVAAGL-GRLDIVVNNAGVISRGRITETTDADWSL 120
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ N E+ + +C+ PL+ A+G G+IV ++S GL ++Y TKAA+ LT+ +
Sbjct: 121 SLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCM 180
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERLLENK-----EFVDKVIARTPLQRVGEPEEVASL 236
+ A IR N+V P T ++ + V ++ PL R+ EPE++A +
Sbjct: 181 GMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADV 240
Query: 237 VAYLCLPAASYITGQIISVDGGFTA 261
V +L AA Y+ G ++ V+GG
Sbjct: 241 VLFLASDAARYLCGSLVEVNGGKAV 265
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 232 bits (595), Expect = 2e-76
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 11/252 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L A++TG T GIG A + GA V R + L+ + E G G D
Sbjct: 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---IGGGAVGIQAD 83
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+A+ + ++L ++V ++ G++++L N G P E + E+Y N +
Sbjct: 84 SANLAELDRLYEKVKAEA-GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTV 142
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
Q PLL S+V S G + + S+Y A+KAA+ RN + IR N+
Sbjct: 143 QKALPLLARGS--SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINT 200
Query: 195 VAPWYTKTSLVERLL-----ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
++P T+T+ + L + + ++ + A+ P+ RVG EEVA+ +L +S++T
Sbjct: 201 LSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVT 260
Query: 250 GQIISVDGGFTA 261
G + VDGG
Sbjct: 261 GAELFVDGGSAQ 272
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 232 bits (593), Expect = 2e-76
Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 16/259 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G LVTG IG AT LA G + N L K + KG VCD
Sbjct: 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
S + + V F GK++ L NN G P +Y ++++++++T N +H+
Sbjct: 65 VTSEEAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 123
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ V + G IV +S+ G+ + + YG +K A+ LT A + A NIR N
Sbjct: 124 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 183
Query: 194 SVAPWYTKTSLVERLLEN--------------KEFVDKVIARTPLQRVGEPEEVASLVAY 239
+++P Y + K ++I P++R G+ E+ +VA+
Sbjct: 184 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 243
Query: 240 LCLPAASYITGQIISVDGG 258
L +S++TG + + GG
Sbjct: 244 LLGDDSSFMTGVNLPIAGG 262
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 231 bits (592), Expect = 3e-76
Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV--VSGSV 72
L+TGG G+G+AT LA GA + + L V +V
Sbjct: 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTY 131
D + Q E + +F G+++ NN G + PT ++A E+ K+++ N +
Sbjct: 71 ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ V +++ G G +V +SVGG+ +G+ S Y A K + LTRN A E+ + IR
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189
Query: 192 TNSVAPWYTKTSLVERLLENK------EFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
N++AP T +VE ++ + ++ I P +R GE E+A++VA+L A
Sbjct: 190 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 249
Query: 246 SYITGQIISVDGGFTA 261
SY+ ++ +DGG +A
Sbjct: 250 SYVNATVVPIDGGQSA 265
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 229 bits (587), Expect = 1e-75
Identities = 68/245 (27%), Positives = 121/245 (49%), Gaps = 2/245 (0%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ ALVTG +RG+G+A LA G +V +R++ + +E + G V
Sbjct: 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ P + +++ Q++ F G+L++ VNN + + +P +E + M N ++
Sbjct: 62 NVGQPAKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q L++ +G G IV ISS+G + ++ + + G +KAA+ LTR LA E + I N
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVN 180
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253
+V+ T ++ ++ ++ TP R+ E +++ V +L A I GQ I
Sbjct: 181 AVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTI 240
Query: 254 SVDGG 258
VDGG
Sbjct: 241 IVDGG 245
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 230 bits (588), Expect = 4e-75
Identities = 76/261 (29%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF---VVSGS 71
G + ++TG + GIG++ A GA V RNE L + ++ G ++
Sbjct: 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFES 129
V D ++ +I +KF GK++ILVNN G N+ T + E Y K NF++
Sbjct: 84 VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 130 TYHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ Q L + G IV +SS V G Y KAA++Q TR A + +
Sbjct: 143 VIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201
Query: 189 NIRTNSVAPWYTKTSLVERLLEN-------KEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
+R NSV+P T + + F+ P+ G+PEE+A+++ +L
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 261
Query: 242 -LPAASYITGQIISVDGGFTA 261
+SYI GQ I DGG T
Sbjct: 262 DRNLSSYIIGQSIVADGGSTL 282
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 229 bits (586), Expect = 4e-75
Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 18/263 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGS 71
T ++TG + GIG+ T A GA V R+ L + + G V+
Sbjct: 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNF 127
V D + D ++++I +F GK+++LVNN G + + Y K + N
Sbjct: 64 VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
++ + + V P L AS G IV +SS V G Y KAA++Q TR+ A + A
Sbjct: 123 QAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 181
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKE-------FVDKVIARTPLQRVGEPEEVASLVAY 239
K IR NSV+P +T + + F+ P+ G+PE +A+++ +
Sbjct: 182 KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF 241
Query: 240 LCLPAAS-YITGQIISVDGGFTA 261
L S YI GQ I DGG +
Sbjct: 242 LADRNLSFYILGQSIVADGGTSL 264
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 227 bits (581), Expect = 1e-74
Identities = 80/259 (30%), Positives = 120/259 (46%), Gaps = 16/259 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+LKG TALVTG T GIG + LA GA + + L E G
Sbjct: 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPA 58
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + Q E L +F G ++ILVNN G P ++ E + KI+ N + +H
Sbjct: 59 DLSDVAQIEALFALAEREF-GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHG 117
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYGATKAAMNQLTRNLACEWAKDNIR 191
+L P ++A G I+ I+SV GL VGS + Y A K + LT+ + E A N+
Sbjct: 118 TRLALPGMRARNWGRIINIASVHGL--VGSTGKAAYVAAKHGVVGLTKVVGLETATSNVT 175
Query: 192 TNSVAPWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
N++ P + T LV++ +++ + D + + P PE + LV +LC
Sbjct: 176 CNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCS 235
Query: 243 PAASYITGQIISVDGGFTA 261
A S + G +VDGG+ A
Sbjct: 236 EAGSQVRGAAWNVDGGWLA 254
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 226 bits (580), Expect = 1e-74
Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 6/250 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A++TGGT GIG A + GA V R+ K K + + D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
++ D KL F G ++ LVNN G + K E + E+ K++ N + +
Sbjct: 63 SSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 135 QLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--KDNIR 191
+L +K G+G SI+ +SS+ G S Y A+K A+ ++++ A + A ++R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+V P Y KT LV+ L +E +TP+ +GEP ++A + YL + + TG
Sbjct: 182 VNTVHPGYIKTPLVDDLPGAEE-AMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGS 240
Query: 252 IISVDGGFTA 261
VDGG+TA
Sbjct: 241 EFVVDGGYTA 250
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 227 bits (580), Expect = 2e-74
Identities = 73/257 (28%), Positives = 119/257 (46%), Gaps = 11/257 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL+G AL+TG G G+ + A GA V R++ + E V
Sbjct: 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV---AA 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYH 132
D + + ++ SKF GK++ILVNN G + + EE+ +I+ N Y
Sbjct: 63 DISKEADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121
Query: 133 LCQLVYPLLKASGVGS----IVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ + P K +G I+ ++S G + + Y ATK + +T+ LA E A
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA 181
Query: 189 NIRTNSVAPWYTKTSLVERLL--ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
IR ++ P +T L+ + +++E K P+ R+ +P+++A A+LC P AS
Sbjct: 182 KIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQAS 241
Query: 247 YITGQIISVDGGFTANG 263
ITG + VDGG + G
Sbjct: 242 MITGVALDVDGGRSIGG 258
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 226 bits (578), Expect = 4e-74
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 3/248 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L+G ++TG + G+G++ A A VV E E N L+E + G
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D L+Q +F GKL++++NN G + E S +++K++ TN +
Sbjct: 65 DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 134 CQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ ++ G+++ +SSV Y A+K M +T LA E+A IR
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N++ P T + + E V + P+ +GEPEE+A++ A+L ASY+TG
Sbjct: 184 NNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGIT 243
Query: 253 ISVDGGFT 260
+ DGG T
Sbjct: 244 LFADGGMT 251
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 226 bits (578), Expect = 5e-74
Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 14 SLKGMTALVTG--GTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK-GFVVS 69
SLKG +VTG G +G+G A +GA V T + + +KE + G
Sbjct: 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
C S + EKL+++V + F G+++ + N G ++ S E ++ ++ +
Sbjct: 77 AYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNG 135
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG----SIYGATKAAMNQLTRNLACEW 185
T+H + V K G GS+V +S+ G H+ + + Y KA + R+LA EW
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVITASMSG--HIANFPQEQTSYNVAKAGCIHMARSLANEW 193
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
R NS++P Y T L + + + E + P+ R G +E+ Y A+
Sbjct: 194 RD-FARVNSISPGYIDTGLSDFVPK--ETQQLWHSMIPMGRDGLAKELKGAYVYFASDAS 250
Query: 246 SYITGQIISVDGGFTA 261
+Y TG + +DGG+T
Sbjct: 251 TYTTGADLLIDGGYTT 266
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 225 bits (577), Expect = 7e-74
Identities = 75/256 (29%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+ +VTG + GIG+A E G+ V S ++ CD
Sbjct: 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECD 54
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+PDQ + I + ++ G +++LVNN G S E+ +I+ N Y+
Sbjct: 55 VTNPDQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYAS 113
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P + S SIV ISSV + S Y +K A+ LT+++A ++A +R N+
Sbjct: 114 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNA 172
Query: 195 VAPWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
V P T LV + E ++ + + P+QR+G+P+EVAS VA+L A
Sbjct: 173 VCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREA 232
Query: 246 SYITGQIISVDGGFTA 261
S+ITG + VDGG +
Sbjct: 233 SFITGTCLYVDGGLSI 248
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 225 bits (576), Expect = 7e-74
Identities = 77/248 (31%), Positives = 113/248 (45%), Gaps = 7/248 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G T ++TGG RG+G + GA V + E +E G D
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE---LGDAARYQHLD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ ++++ +F G ++ LVNN G + S E + K++ N +
Sbjct: 60 VTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V P +K +G GSIV ISS GL + S YGA+K + L++ A E D IR NS
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVG-EPEEVASLVAYLCLPAASYITGQII 253
V P T T + + TP+ RVG EP E+A V L +SY+TG +
Sbjct: 179 VHPGMTYTPMTAETGI--RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAEL 236
Query: 254 SVDGGFTA 261
+VDGG+T
Sbjct: 237 AVDGGWTT 244
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 225 bits (577), Expect = 8e-74
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 12/260 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G +VTGG RGIG V GA V C ++E +E F++ CD
Sbjct: 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL----CD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHL 133
D + L+ E +F G+L+ +VNN G + + E SA+ + +++ N TY L
Sbjct: 63 VTQEDDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+L P L+ S G+++ ISS+ G Y ATK A+ +T+ LA + + +R N
Sbjct: 122 TKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 180
Query: 194 SVAPWYTKTSLVERLL----ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
++P T L E L + + + + + PL R+G+P EV + +L A++ T
Sbjct: 181 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCT 239
Query: 250 GQIISVDGGFTANGFNPGIR 269
G + V GG R
Sbjct: 240 GIELLVTGGAELGYGCKASR 259
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 225 bits (575), Expect = 9e-74
Identities = 77/252 (30%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+G A+V GGT G+G ATV L GA V RNE + + +E+ + + D
Sbjct: 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHAL---RSD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A ++ L G G +++L N G + +P + S Y + N + +
Sbjct: 63 IADLNEIAVLGAAAGQTL-GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
Q + PL++ G SIVF SSV S+Y A+KAA+ LA E IR NS
Sbjct: 122 QRLTPLIREGG--SIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNS 179
Query: 195 VAPWYTKTSLVERLL----ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
V+P + T E EF TP++R G +EVA V +L A++ TG
Sbjct: 180 VSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTG 238
Query: 251 QIISVDGGFTAN 262
++VDGG
Sbjct: 239 AKLAVDGGLGQK 250
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 4e-73
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 15/252 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ++T +GIGQA A GA V NE +L + K + V D
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV-----LD 58
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
Q ++ EV +L++L N G ++ +++ M N S Y +
Sbjct: 59 VTKKKQIDQFANEVE-----RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P + A G+I+ +SSV +Y TKAA+ LT+++A ++ + IR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173
Query: 194 SVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
V P T ++ ++ +E + + R R EE+A L YL ++Y+T
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233
Query: 250 GQIISVDGGFTA 261
G + +DGG++
Sbjct: 234 GNPVIIDGGWSL 245
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 7e-73
Identities = 75/260 (28%), Positives = 121/260 (46%), Gaps = 20/260 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF--VVSGS 71
LKG TALVTG T GIG+A L GA V R E +N+ +KE +++ ++
Sbjct: 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
V D + + +I++ K++IL+NN+G + E++ K+ N S
Sbjct: 67 VADLGTEQGCQDVIEKYP-----KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGV 121
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
L + + G ++FI+S + + Y ATK L+R+LA N+
Sbjct: 122 RLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVT 181
Query: 192 TNSVAPWYTKTSLVERLLEN-------------KEFVDKVIARTPLQRVGEPEEVASLVA 238
N++ P T T VE +L + K F+ + + +QR+ PEE+A LV
Sbjct: 182 VNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVT 241
Query: 239 YLCLPAASYITGQIISVDGG 258
+L P +S I G + +DGG
Sbjct: 242 FLSSPLSSAINGSALRIDGG 261
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 222 bits (567), Expect = 1e-72
Identities = 76/252 (30%), Positives = 110/252 (43%), Gaps = 12/252 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ +VTG GIGQA E LA GA V N K+ + G
Sbjct: 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT-----IEYSAEEYSKIMTTNFE 128
D + P+ + + ++F G ++ LVNN I + E Y K M+ N +
Sbjct: 66 DVSDPESAKAMADRTLAEF-GGIDYLVNNAA--IFGGMKLDFLLTIDPEYYKKFMSVNLD 122
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ VY + G G+IV SS + S YG K +N LT+ L+ E
Sbjct: 123 GALWCTRAVYKKMTKRGGGAIVNQSSTAAW--LYSNY-YGLAKVGINGLTQQLSRELGGR 179
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
NIR N++AP T KE VD ++ PL R+G P+++ + +L AS+I
Sbjct: 180 NIRINAIAPGPIDTEANRTTT-PKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWI 238
Query: 249 TGQIISVDGGFT 260
TGQI +VDGG
Sbjct: 239 TGQIFNVDGGQI 250
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 1e-72
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 17/262 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE--WQSKGFVVSGS 71
S+ TA++TG T GIG A LA GA + + + + + V
Sbjct: 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D P + ++ V +F G +ILVNN G + ++ E++ +I+ N S++
Sbjct: 82 PADMTKPSEIADMMAMVADRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSF 140
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYGATKAAMNQLTRNLACEWAKDN 189
H + P +K G G I+ I+S GL V S S Y A K + LT+ +A E A+
Sbjct: 141 HTIRGAIPPMKKKGWGRIINIASAHGL--VASPFKSAYVAAKHGIMGLTKTVALEVAESG 198
Query: 190 IRTNSVAPWYTKTSLVERLLENK---------EFVDKVI-ARTPLQRVGEPEEVASLVAY 239
+ NS+ P Y T LVE+ + ++ + +++V+ P ++ E+VASL Y
Sbjct: 199 VTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALY 258
Query: 240 LCLPAASYITGQIISVDGGFTA 261
L A+ ITG +S+DGG+TA
Sbjct: 259 LAGDDAAQITGTHVSMDGGWTA 280
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 222 bits (567), Expect = 2e-72
Identities = 81/253 (32%), Positives = 117/253 (46%), Gaps = 11/253 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ALV+GG RG+G + V + GA V + E E V D
Sbjct: 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVH---LD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
P Q + + + F G L++LVNN G +Y+ E+ +I+ N +
Sbjct: 62 VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V +K +G GSI+ ISS+ GL+ + Y ATK A+ LT++ A E IR NS
Sbjct: 121 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
+ P KT + + + E+ I +T L R EP EV++LV YL +SY TG
Sbjct: 181 IHPGLVKTPMTDWVPED-------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV 233
Query: 255 VDGGFTANGFNPG 267
VDGG A +
Sbjct: 234 VDGGTVAGLAHND 246
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 222 bits (567), Expect = 2e-72
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 19/265 (7%)
Query: 2 ANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61
E+ + S + ++TG ++GIG V V SR+
Sbjct: 13 LGTENLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP-------- 64
Query: 62 QSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
S + D + P+ +++++E +F G+++ LVNN G + KP +E + E+Y
Sbjct: 65 -SADPDIHTVAGDISKPETADRIVREGIERF-GRIDSLVNNAGVFLAKPFVEMTQEDYDH 122
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGS-IYGATKAAMNQLTR 179
+ N +H+ Q + G G IV I++ VG S + TK +N +TR
Sbjct: 123 NLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTR 182
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
+LA E+++ +R N+V+P KT + E + P+ R+GE +V V Y
Sbjct: 183 SLAMEFSRSGVRVNAVSPGVIKTPMHP-----AETHSTLAGLHPVGRMGEIRDVVDAVLY 237
Query: 240 LCLPAASYITGQIISVDGGFTANGF 264
L A +ITG+I+ VDGG A +
Sbjct: 238 --LEHAGFITGEILHVDGGQNAGRW 260
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 222 bits (567), Expect = 3e-72
Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 20/267 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G AL+TGG G+G+A V+ GA V ++ L + G G V D
Sbjct: 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYSKIMTTNFES 129
S +++ + + F GK++ L+ N G T + + + I N +
Sbjct: 60 VRSLQDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
H + P L +S GS+VF S G G G +Y ATK A+ L R +A E A +
Sbjct: 119 YIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-H 176
Query: 190 IRTNSVAPWYTKTSLVERL--------LENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
+R N VAP T L + + D + + P+ R+ EE +
Sbjct: 177 VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFA 236
Query: 242 LPAAS-YITGQIISVDGGFTANGFNPG 267
S TG +++ DGG GF
Sbjct: 237 TRGDSLPATGALLNYDGGMGVRGFLTA 263
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 220 bits (563), Expect = 6e-72
Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 22/261 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
TA+VT G + L+ G V + + ++ + F + S
Sbjct: 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSE 56
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
+ +LI+ V S + G++++LV+N +P +Y+ E+Y + + L V
Sbjct: 57 QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDNIRTN 193
+K G I+FI+S Y + +A L L+ E + NI
Sbjct: 116 ASQMKKRKSGHIIFITSATPFG----PWKELSTYTSARAGACTLANALSKELGEYNIPVF 171
Query: 194 SVAPWYTKTSLVERLLE------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
++ P Y + N E V V T LQR+G +E+ LVA+L + Y
Sbjct: 172 AIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDY 231
Query: 248 ITGQIISVDGGFTANGFNPGI 268
+TGQ+ + GGF PG+
Sbjct: 232 LTGQVFWLAGGFPMIERWPGM 252
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 219 bits (560), Expect = 1e-71
Identities = 77/259 (29%), Positives = 115/259 (44%), Gaps = 12/259 (4%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
++R L+G ALVTGG G+G V+ L G GA V NE + E G
Sbjct: 1 TNR--LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSM 55
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D +S ++ V + G LN+LVNN G + E++S+++ N ES
Sbjct: 56 FVRHDVSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTES 114
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ CQ +K +G GSI+ ++SV + + Y A+KAA++ LTR A K
Sbjct: 115 VFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQG 173
Query: 190 --IRTNSVAPWYTKTSLVERLLEN---KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
IR NS+ P T +++ L KE V R PE +A LV +L
Sbjct: 174 YAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDE 233
Query: 245 ASYITGQIISVDGGFTANG 263
+S ++G + D G
Sbjct: 234 SSVMSGSELHADNSILGMG 252
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 219 bits (559), Expect = 2e-71
Identities = 72/261 (27%), Positives = 114/261 (43%), Gaps = 17/261 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE--WQSKGFVVSGSV 72
LKG A+VTG T GIG LA GA + + + ++ G V
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + L+ + G+++ILVNN G ++ E++ I+ N + +H
Sbjct: 62 ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNI 190
P +K G G I+ I+S GL V S S Y A K + T+ A E A I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGL--VASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 191 RTNSVAPWYTKTSLVERLLENK---------EFVDKVI-ARTPLQRVGEPEEVASLVAYL 240
N++ P + +T LVE+ + +++ + P + PE++ +L
Sbjct: 179 TANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFL 238
Query: 241 CLPAASYITGQIISVDGGFTA 261
AA+ ITG +SVDGG+TA
Sbjct: 239 ASDAAAQITGTTVSVDGGWTA 259
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 218 bits (557), Expect = 3e-71
Identities = 55/247 (22%), Positives = 96/247 (38%), Gaps = 13/247 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVT G A VE L G V + + + + A +
Sbjct: 3 IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF------ESENPGTIALAE 56
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVG---TNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+ E+L+ ++ +V+N R P S + ++ L Q
Sbjct: 57 QKPERLVDATLQHG-EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L+A+G S++FI+S G + +YG +AA L + A ++D I ++
Sbjct: 116 SAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAI 175
Query: 196 APWYTKTSLVERLLE---NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
P + + N E ++V PL R+G P+E+ +L+ +L A+ I GQ
Sbjct: 176 GPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQF 235
Query: 253 ISVDGGF 259
+ GG+
Sbjct: 236 FAFTGGY 242
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 217 bits (555), Expect = 7e-71
Identities = 60/272 (22%), Positives = 107/272 (39%), Gaps = 53/272 (19%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+++G GIG AT + L G + + E+ + D ++
Sbjct: 3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTA 45
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ R++ I +V +K + ++ LV G + + +++ N+ L
Sbjct: 46 EGRKQAIADVLAKCSKGMDGLVLCAG-------LGPQTKVLGNVVSVNYFGATELMDAFL 98
Query: 139 PLLKASGVGSIVFI----------------------------SSVGGLSHVGSGSIYGAT 170
P LK + V I + V G Y +
Sbjct: 99 PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158
Query: 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR-TPLQRVGE 229
K A+ R A W + +R N++AP T+T L++ L++ + + + P+ R E
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAE 218
Query: 230 PEEVASLVAYLCLPAASYITGQIISVDGGFTA 261
P E+AS++A+L PAASY+ G I +DGG A
Sbjct: 219 PSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 216 bits (553), Expect = 2e-70
Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 3/247 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK A++TGG GIG+A E A GA + + ++ G V CD
Sbjct: 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ P E ++V S F G+ +ILVNN G P E + E++ K N +S + +
Sbjct: 63 VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 121
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P +K +G G I+ ++S + + + Y +TKAA TR LA + KD I N+
Sbjct: 122 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 181
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
+AP +T+ E + F + R+ P ++ A+L AS+ITGQ ++
Sbjct: 182 IAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLA 241
Query: 255 VDGGFTA 261
VDGG
Sbjct: 242 VDGGMVR 248
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 216 bits (553), Expect = 2e-70
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 12/254 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
LKG L+TG ++GIG AT A GA V + +++ + ++ G +
Sbjct: 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTY 131
D A+ + ++L+ E +KF G +++L+NN G + KP E Y +M N S
Sbjct: 64 ADLATSEACQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122
Query: 132 HLCQLVYPLLKASGV-----GSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEW 185
+ P L A+ +++ S+ G + G G +YGA KA ++ + +N
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFH 182
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
KD +R N V+P T+ + + D++ P+ R G EE+A + A
Sbjct: 183 TKDGVRFNIVSPGTVDTAFHADKTQ--DVRDRISNGIPMGRFGTAEEMAPAFLFFASHLA 240
Query: 246 S-YITGQIISVDGG 258
S YITGQ++ ++GG
Sbjct: 241 SGYITGQVLDINGG 254
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 216 bits (552), Expect = 3e-70
Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 13/256 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGS 71
++G A+VT G+ G+G A+ ELA GA + SRN +L S G V
Sbjct: 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D P ++L ++ G +ILV + G +E E++ + S
Sbjct: 64 AGDIREPGDIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAV 121
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ + + G G +V+I SV L ++ + + + R LA E A +
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181
Query: 192 TNSVAPWYTKTSLVERLLENK---------EFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
N+V P T V L E + E + + +R P+ RVG+PEE+AS+VA+L
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLAS 241
Query: 243 PAASYITGQIISVDGG 258
AS+ITG +I VDGG
Sbjct: 242 EKASFITGAVIPVDGG 257
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 215 bits (551), Expect = 3e-70
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 16/251 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV-- 72
L LVTG + GIG+ A GA V RNE +L + +
Sbjct: 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 73 -CDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFEST 130
+ + ++L Q + + +L+ +++N G P E + + + +M N +T
Sbjct: 70 DLLTCTSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNAT 128
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ L Q + PLL S GS+VF SS G + Y A+K A + + LA E+ + +
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 187
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
R N + P T+T++ + Q++ P ++ L +L + TG
Sbjct: 188 RVNCINPGGTRTAMRASAFPTE----------DPQKLKTPADIMPLYLWLMGDDSRRKTG 237
Query: 251 QIISVDGGFTA 261
G
Sbjct: 238 MTFDAQPGRKP 248
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 215 bits (551), Expect = 4e-70
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 14/259 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G A+VTGG++GIG A L GA V + + + ++ GF V
Sbjct: 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EV 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + +Q+ G ++L N G + +P ++ + EE+ N +
Sbjct: 66 DVTKRASVDAAMQKAIDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLA 124
Query: 134 CQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q+ L ++ G IV +S+ + Y A+K A+ T+ LA E A NIR
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRV 184
Query: 193 NSVAPWYTKTSLVERLLENK---------EFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
N V P + KT++ ER + + + ++ TPL R+ EPE+VA +V +L
Sbjct: 185 NCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASD 244
Query: 244 AASYITGQIISVDGGFTAN 262
AA ++TGQ I+V GG +
Sbjct: 245 AARFMTGQGINVTGGVRMD 263
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 213 bits (544), Expect = 5e-69
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 5/247 (2%)
Query: 15 LKGMTALVTGGT-RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSV 72
LKG LVT GIG T GA V +E L + + G V V
Sbjct: 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD S + + LI + K G+L++LVNN G + P ++ + EE+ +++ S
Sbjct: 80 CDVTSTEAVDALITQTVEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMR 138
Query: 133 LCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ G IV +SV G S S Y A KA + LTR A E + +R
Sbjct: 139 ATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVR 198
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+V+P + +E+ + E +D++ + R EP EVA+ +A+L +SY+TG+
Sbjct: 199 INAVSPSIARHKFLEKTS-SSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGE 257
Query: 252 IISVDGG 258
++SV
Sbjct: 258 VVSVSSQ 264
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 211 bits (540), Expect = 2e-68
Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 18/256 (7%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G LVTG +RGIG++ V+ L L VV+ +R+E L K +++ + F V V D
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYV---VGD 58
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
++L+ GK++ LV N G + E + K+ NF S L
Sbjct: 59 ITEDSVLKQLVNAAVKGH-GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P LK + G++VF+SS + S YG++KAA+N LA E + ++
Sbjct: 118 VGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAI 174
Query: 194 SVAPWYTKTSLVERLLEN-------KEFVDKVIARTPLQRVGEPEEVASLVAYLCL-PAA 245
+VAP T + + EN E + ++ + A++ A L L
Sbjct: 175 AVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP 234
Query: 246 SYITGQIISVDGGFTA 261
+ GQ +S + A
Sbjct: 235 DGVNGQYLSYNDPALA 250
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 211 bits (540), Expect = 2e-68
Identities = 69/258 (26%), Positives = 101/258 (39%), Gaps = 14/258 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G +AL+TG RGIG+A E GA V + + E G D
Sbjct: 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE---IGPAAYAVQMD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D + I G L+ILVNN P +E + E Y K+ N T
Sbjct: 63 VTRQDSIDAAIAATVEHA-GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTL 121
Query: 135 QLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q + A G G I+ ++S G +IY ATKAA+ LT++ + K I N
Sbjct: 122 QAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181
Query: 194 SVAPWYTKTSLVERL---------LENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
++AP + + E V P R+G E++ + +L
Sbjct: 182 AIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAE 241
Query: 245 ASYITGQIISVDGGFTAN 262
+ YI Q +VDGG +
Sbjct: 242 SDYIVSQTYNVDGGNWMS 259
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 211 bits (540), Expect = 2e-68
Identities = 73/249 (29%), Positives = 115/249 (46%), Gaps = 9/249 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G T LVTG GIG+A ++ A GA + R E L + + +++ V V D
Sbjct: 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VAD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ P E + E +F G+L+ + + G + E + K++ N ++ +
Sbjct: 61 VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ +L+ G S+V SV GL G Y A K + L R LA E A+ +R N
Sbjct: 120 RKAGEVLEEGG--SLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNV 176
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
+ P +T + L ++ + +PL R G PEEVA +L ++YITGQ +
Sbjct: 177 LLPGLIQTPMTAGLPP--WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALY 234
Query: 255 VDGGFTANG 263
VDGG + G
Sbjct: 235 VDGGRSIVG 243
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 211 bits (540), Expect = 2e-68
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 8/251 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVH-TCSRNEVELNKCLKEWQSKGFVVSG 70
LK ++ GG + +G T + A V+H +++ NK E + +G V+
Sbjct: 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL 67
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D ++ ++ KL +F GK++I +N VG ++KP +E S E+ + T N +
Sbjct: 68 YQSDLSNEEEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVA 126
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
Y + + +G I+ I++ ++ G S Y KA + TR + E K I
Sbjct: 127 YFFIKQAAKHMNPNG--HIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
N++AP TS E KE ++ ++ + E++A ++ +L +I G
Sbjct: 185 SVNAIAPGPMDTSFFYG-QETKESTAFHKSQAMGNQLTKIEDIAPIIKFLT-TDGWWING 242
Query: 251 QIISVDGGFTA 261
Q I +GG+T
Sbjct: 243 QTIFANGGYTT 253
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 211 bits (540), Expect = 3e-68
Identities = 65/254 (25%), Positives = 110/254 (43%), Gaps = 5/254 (1%)
Query: 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG 65
+ A+VTG +RGIG A LA G VV + + + ++ G
Sbjct: 17 NLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG 76
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT 125
+ D + P +L F G +++LVNN G E + +++
Sbjct: 77 GKALTAQADVSDPAAVRRLFATAEEAF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAV 135
Query: 126 NFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
N + T++ + L+ G I+ +S+ S IY A KA + +T L+ E
Sbjct: 136 NLKGTFNTLREAAQRLRVGG--RIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKEL 193
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
+I N+VAP T T L + E D+ PL+R+G P+++A VA+L P
Sbjct: 194 RGRDITVNAVAPGPTATDLFLEGK-SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDG 252
Query: 246 SYITGQIISVDGGF 259
+++ GQ++ +GG
Sbjct: 253 AWVNGQVLRANGGI 266
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 211 bits (539), Expect = 3e-68
Identities = 77/262 (29%), Positives = 115/262 (43%), Gaps = 8/262 (3%)
Query: 2 ANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKE 60
N + SL G TA VTGG+RGIG A + LA GA V T + E
Sbjct: 16 ENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSE 75
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
+ G D + E+ I+E G L+ILVN+ G P E + ++
Sbjct: 76 IEQAGGRAVAIRADNRDAEAIEQAIRETVEAL-GGLDILVNSAGIWHSAPLEETTVADFD 134
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTR 179
++M NF + + + L G I+ I S + L S+Y A+KAA+ LT+
Sbjct: 135 EVMAVNFRAPFVAIRSASRHLGDGG--RIITIGSNLAELVPWPGISLYSASKAALAGLTK 192
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
LA + I N V P T T + + + + R GEP+++A LVA+
Sbjct: 193 GLARDLGPRGITVNIVHPGSTDTDMNP---ADGDHAEAQRERIATGSYGEPQDIAGLVAW 249
Query: 240 LCLPAASYITGQIISVDGGFTA 261
L P ++TG +++DGG A
Sbjct: 250 LAGPQGKFVTGASLTIDGGANA 271
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 209 bits (535), Expect = 7e-68
Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 19/258 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
G VTG +GIG AT GA V + + + + + V
Sbjct: 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----------EQYPFATEVM 53
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A Q ++ Q + ++ +L+ LVN G T + S E++ + N ++L
Sbjct: 54 DVADAAQVAQVCQRLLAET-ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNL 112
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q + G+IV ++S + S YGA+KAA+ L ++ E A +R N
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCN 172
Query: 194 SVAPWYTKTSLVERLLEN--------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
V+P T T + L + + F ++ PL ++ P+E+A+ + +L A
Sbjct: 173 VVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLA 232
Query: 246 SYITGQIISVDGGFTANG 263
S+IT Q I VDGG T
Sbjct: 233 SHITLQDIVVDGGSTLGA 250
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 1e-67
Identities = 82/255 (32%), Positives = 123/255 (48%), Gaps = 12/255 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+ TA VTG + GIG A LA G V+ C+R+ ++ + ++ G V GS CD
Sbjct: 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
S D+ + +F G + ILVN+ G N T + ++ ++ TN + +
Sbjct: 82 VTSTDEVHAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVT 140
Query: 135 QLVYPLLK--ASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ V +G G IV I+S GG V + Y A+K + T+++ E AK I
Sbjct: 141 REVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITV 200
Query: 193 NSVAPWYTKTSLVERLLENK---------EFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
N+V P Y +T + ER+ E E ++ A+ PL R PEEVA LV YL
Sbjct: 201 NAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTD 260
Query: 244 AASYITGQIISVDGG 258
AA+ IT Q ++V GG
Sbjct: 261 AAASITAQALNVCGG 275
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 208 bits (533), Expect = 2e-67
Identities = 71/255 (27%), Positives = 109/255 (42%), Gaps = 8/255 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
T +V G R IG+A A GA VV T + + E + G
Sbjct: 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYH 132
D + + E I KF G+++ LV+ G I K E + +++ N S +
Sbjct: 66 DLTNAAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFL 124
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIR 191
+ P + G +IV SS G G G++ Y +K A+ TR LA E IR
Sbjct: 125 TAKTALPKMAKGG--AIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIR 181
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+V P T+ + + E ++V T L+R G E+VA LVA+L A+Y+TG
Sbjct: 182 VNAVCPGMISTTFHDTFTK-PEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGA 240
Query: 252 IISVDGGFTANGFNP 266
++GG + +
Sbjct: 241 CYDINGGVLFSEGHH 255
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 4e-67
Identities = 60/264 (22%), Positives = 93/264 (35%), Gaps = 39/264 (14%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+TG GIG A E LA G V R + ++ D ++P
Sbjct: 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADI-----------------EADLSTP 45
Query: 79 DQREKLIQEVGSKF------------------NGKLNILVNNVGTN--IRKPTIEYSAEE 118
RE + V + N L + VN G + + S +
Sbjct: 46 GGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ 105
Query: 119 YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178
+ + P+++A G + Y +K A+ L
Sbjct: 106 QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQT-HLAYAGSKYAVTCLA 164
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVI-ARTPLQRVGEPEEVASLV 237
R +WA +R N VAP +T L++ + + + PL R EP EVA +
Sbjct: 165 RRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAI 224
Query: 238 AYLCLPAASYITGQIISVDGGFTA 261
A+L P AS+I G ++ VDGG A
Sbjct: 225 AFLLGPQASFIHGSVLFVDGGMDA 248
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 6e-67
Identities = 67/268 (25%), Positives = 110/268 (41%), Gaps = 12/268 (4%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59
+ F+S A+VTGG RGIG LA G + T + + +
Sbjct: 13 LGTENLYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIA 72
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG--TNIRKPTIEYSAE 117
E G V D A + + V ++F G+++ LVNN G + +R ++ E
Sbjct: 73 ELSGLGARVIFLRADLADLSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLKPE 131
Query: 118 EYSKIMTTNFESTYHLCQLVYPLL---KASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174
+ I+ N T Q V + A SI+ I+SV + Y +KA +
Sbjct: 132 NFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGL 191
Query: 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVI--ARTPLQRVGEPEE 232
++ LA A+ I V P ++ + + D +I P++R GEPE+
Sbjct: 192 AAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV---SGKYDGLIESGLVPMRRWGEPED 248
Query: 233 VASLVAYLCLPAASYITGQIISVDGGFT 260
+ ++VA L + TG +I DGG +
Sbjct: 249 IGNIVAGLAGGQFGFATGSVIQADGGLS 276
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 8e-67
Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 9/267 (3%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
M + + S+ L+ A++TGG GIG+ T + GA V + K
Sbjct: 1 MGSTSTPDSSTN-RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNN 59
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNN--VGTNIRKPTIEYSAEE 118
S V+S CD + L+ +K GKL+I+ N V + +E E+
Sbjct: 60 IGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNED 117
Query: 119 YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQL 177
+ ++M N + + + ++ + GSIVF +S+ + G +Y ATK A+ L
Sbjct: 118 FKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGL 177
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR---TPLQRVGEPEEVA 234
T +L E + IR N V+P+ + L+ + + +A + E+VA
Sbjct: 178 TTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVA 237
Query: 235 SLVAYLCLPAASYITGQIISVDGGFTA 261
VAYL + Y++G + +DGG+T
Sbjct: 238 DAVAYLAGDESKYVSGLNLVIDGGYTR 264
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 8e-67
Identities = 83/257 (32%), Positives = 122/257 (47%), Gaps = 14/257 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ ALVTG T GIG L G V C+R E L LKE + G G C
Sbjct: 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D S + E L+ V ++ G +++LVNN G T E + E + ++ TN + +
Sbjct: 79 DVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 137
Query: 134 CQLVYPL---LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ V L+ G G IV I+S GG V + Y A+K + T+ L E A+ I
Sbjct: 138 TKQVLKAGGMLER-GTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196
Query: 191 RTNSVAPWYTKTSLVERLLENK---------EFVDKVIARTPLQRVGEPEEVASLVAYLC 241
N+V P + +T + + E+ E D++ AR P+ R +P EVA +VAYL
Sbjct: 197 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI 256
Query: 242 LPAASYITGQIISVDGG 258
P A+ +T Q ++V GG
Sbjct: 257 GPGAAAVTAQALNVCGG 273
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 207 bits (528), Expect = 2e-66
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 10/265 (3%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK 64
+S + S +G ALVTGG G+G+ + L+ G V R L+ E +
Sbjct: 21 QSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR 80
Query: 65 -GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKI 122
G +V VCD PDQ L V ++F +L++LVNN G+N+ P E + E+++ I
Sbjct: 81 TGNIVRAVVCDVGDPDQVAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGI 139
Query: 123 MTTNFESTYHLCQLVYPLLKASGV--GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+ N + Q + ++KA G I+ S+ + + + Y ATK A+ LT++
Sbjct: 140 VAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKS 199
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
A + +I + T + R+ V + + E +A V Y+
Sbjct: 200 TALDGRMHDIACGQIDIGNAATDMTARMSTG---VLQANGEVAAEPTIPIEHIAEAVVYM 256
Query: 241 C-LPAASYITGQ-IISVDGGFTANG 263
LP ++ + +++ G
Sbjct: 257 ASLPLSANVLTMTVMATRMPLVGRG 281
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 3e-66
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 14/253 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
AL+T GT+G+G+ E+L G V T + + + ++ +
Sbjct: 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFEST 130
D + K+++E S F GK++ L+NN G + + ++Y +E+++++ N +
Sbjct: 64 ADVTKKEDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAV 122
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGSI----YGATKAAMNQLTRNLACEW 185
+HL +LV P+++ G I+ G I + A K + LT+ +A E
Sbjct: 123 FHLLKLVVPVMRKQNFGRIINYGFQ---GADSAPGWIYRSAFAAAKVGLVSLTKTVAYEE 179
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
A+ I N V P + E ++ E TP+ R G E++A +++LC +
Sbjct: 180 AEYGITANMVCPGDIIGEMKEATIQ--EARQLKEHNTPIGRSGTGEDIARTISFLCEDDS 237
Query: 246 SYITGQIISVDGG 258
ITG II V G
Sbjct: 238 DMITGTIIEVTGA 250
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 5e-66
Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 13/258 (5%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
A+VTGG +GIG+ E+LA G V + E + + +K ++ D
Sbjct: 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ I E K G ++LVNN G KP +E + E+ +I + N S +
Sbjct: 62 VTDKANFDSAIDEAAEKL-GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGI 120
Query: 135 QLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q GV G I+ +S+ + S Y TK A+ LT+ A E A N
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180
Query: 194 SVAPWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
+ AP T + E++ E + + L R PE+VA LV++L
Sbjct: 181 AYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN 240
Query: 245 ASYITGQIISVDGGFTAN 262
++Y+TGQ++ VDGG N
Sbjct: 241 SNYVTGQVMLVDGGMLYN 258
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 7e-66
Identities = 78/247 (31%), Positives = 114/247 (46%), Gaps = 5/247 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSV 72
L+G + +VTGGT+GIG+ A GA V R+ +++ C+ + G V G
Sbjct: 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + Q + L +F G ++++ N G P + E+ + I N T++
Sbjct: 67 TDVSDRAQCDALAGRAVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFY 125
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAKDNIR 191
Q L ASG G +V SS+ G G S YGATKAA R A E A I
Sbjct: 126 AVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKIT 185
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N++ P T + E E++ + P +G PE++ L A+L A YITGQ
Sbjct: 186 VNAIMPGNIMTEGLLENGE--EYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQ 243
Query: 252 IISVDGG 258
I+VDGG
Sbjct: 244 AIAVDGG 250
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 8e-66
Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 16/260 (6%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQS 63
E+ + +L L+TG ++ +G L G V+ + + + +
Sbjct: 15 ENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA--- 71
Query: 64 KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
+ D + I + ++ L +V+N + + A+ ++++
Sbjct: 72 GAVALY---GDFSCETGIMAFIDLLKTQT-SSLRAVVHNASEWLAET-PGEEADNFTRMF 126
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
+ + + Y + PLL AS V IV IS Y ATKA + LT + A
Sbjct: 127 SVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAA 186
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
+A ++ N +AP ++ + +A++ L E + + YL
Sbjct: 187 RFA-PLVKVNGIAPALLMFQ----PKDDAAYRANALAKSALGIEPGAEVIYQSLRYLL-- 239
Query: 244 AASYITGQIISVDGGFTANG 263
++Y+TG ++V+GG G
Sbjct: 240 DSTYVTGTTLTVNGGRHVKG 259
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 203 bits (520), Expect = 2e-65
Identities = 67/254 (26%), Positives = 100/254 (39%), Gaps = 15/254 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG +GIG+A L G V N+ E G D +
Sbjct: 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
DQ +++ G +++VNN G P + E K+ N + Q
Sbjct: 64 DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122
Query: 139 P-LLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
K G I+ S G HVG+ ++Y ++K A+ LT+ A + A I N
Sbjct: 123 EAFKKEGHGGKIINACSQAG--HVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 180
Query: 196 APWYTKTSLVERLLE---------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
P KT + + + R L R+ EPE+VA+ V+YL P +
Sbjct: 181 CPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 240
Query: 247 YITGQIISVDGGFT 260
Y+TGQ + +DGG
Sbjct: 241 YMTGQSLLIDGGMV 254
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 2e-65
Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 16/245 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF---VVSGS 71
LKG LVTG RGIG A A GA V R E L + + +S G ++
Sbjct: 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFEST 130
+ A+ Q +L V +F G+L+ L++N R P + E++ ++M N +T
Sbjct: 72 NLENATAQQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNAT 130
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW-AKDN 189
+ L + + PLLK S SI F SS G + YG +K A L + LA E
Sbjct: 131 FMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTA 190
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
+R NS+ P T+T + + PL PE++ + YL P ++ I
Sbjct: 191 VRANSINPGATRTGMRAQAYP---------DENPLNN-PAPEDIMPVYLYLMGPDSTGIN 240
Query: 250 GQIIS 254
GQ ++
Sbjct: 241 GQALN 245
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 3e-65
Identities = 71/254 (27%), Positives = 116/254 (45%), Gaps = 14/254 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVVS 69
LKG ALVTG +RGIG+A + LA GA V + E + + E QS G F +
Sbjct: 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 63
Query: 70 GSVCDAASPDQREKLIQEVGSKFN-----GKLNILVNNVGTNIRKPTIEYSAEEYSKIMT 124
+ S E L + ++ K +IL+NN G E + + + ++++
Sbjct: 64 ---ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVS 120
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
N ++ + + Q L+ + I+ ISS + Y TK A+N +T LA +
Sbjct: 121 VNAKAPFFIIQQALSRLRDNS--RIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQ 178
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
I N++ P + KT + LL + + R+GE E++A A+L P
Sbjct: 179 LGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPD 238
Query: 245 ASYITGQIISVDGG 258
+ ++TGQ+I V GG
Sbjct: 239 SRWVTGQLIDVSGG 252
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 203 bits (518), Expect = 5e-65
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 23/274 (8%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59
+ NA ++ R L G ALVTG RGIG A L LGA VV + + + K +
Sbjct: 4 VENASETYIPGR--LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVS 61
Query: 60 EWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA 116
E ++ G + D + KL + + F G L+I V+N G + +
Sbjct: 62 EIKALGSDAIAIK---ADIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTE 117
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMN 175
EE+ ++ + N + + + Y L G IV SS V S+Y +K A++
Sbjct: 118 EEFDRVFSLNTRGQFFVAREAYRHLTEGG--RIVLTSSNTSKDFSVPKHSLYSGSKGAVD 175
Query: 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK----------EFVDKVIARTPLQ 225
R + + I N+VAP T T + + + + +PL
Sbjct: 176 SFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLH 235
Query: 226 RVGEPEEVASLVAYLCLPAASYITGQIISVDGGF 259
R G P++VA++V +L ++ G+++++DGG
Sbjct: 236 RNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 202 bits (515), Expect = 2e-64
Identities = 64/273 (23%), Positives = 114/273 (41%), Gaps = 16/273 (5%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59
SL+G ALVTG RGIG+ EL G V+ + + + +
Sbjct: 13 YDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVA 72
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+ G + + + ++ +E F GKL+I+ +N G + + EE+
Sbjct: 73 AIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEF 131
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLT 178
++ T N + + + Y L+ G ++ + S+ G + ++Y +K A+
Sbjct: 132 DRVFTINTRGQFFVAREAYKHLEIGG--RLILMGSITGQAKAVPKHAVYSGSKGAIETFA 189
Query: 179 RNLACEWAKDNIRTNSVAPWYTKT-----------SLVERLLENKEFVDKVIARTPLQRV 227
R +A + A I N VAP KT E L + + +PL+RV
Sbjct: 190 RCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRV 249
Query: 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFT 260
G P ++A +V +L ++TG++I +DGG
Sbjct: 250 GLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC 282
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 5e-64
Identities = 69/251 (27%), Positives = 105/251 (41%), Gaps = 14/251 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G TALVTG +GIG+A LA GA V N K + D
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAI---AAD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ P + L E+ + G ++ILVNN + + + KI+ N T+ +
Sbjct: 61 ISDPGSVKALFAEIQALT-GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 135 QLVYPL-LKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDN 189
+ A G ++ I+S + G+ Y A K + TR LA E K N
Sbjct: 120 RAGTDQMRAAGKAGRVISIASNTFFA----GTPNMAAYVAAKGGVIGFTRALATELGKYN 175
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
I N+V P ++ V+ E V ++ G+PE +A +V++L A +IT
Sbjct: 176 ITANAVTPGLIESDGVKASPH-NEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWIT 234
Query: 250 GQIISVDGGFT 260
GQ ++VD G
Sbjct: 235 GQTLNVDAGMV 245
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 6e-64
Identities = 77/265 (29%), Positives = 117/265 (44%), Gaps = 15/265 (5%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
+ +AE + + + L + LVTGGT+GIG+ A GA V +R+ EL+ E
Sbjct: 25 VESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAE 84
Query: 61 WQSKGFV-VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
G V G D + P + V F G L+++ N G + E+
Sbjct: 85 LGELGAGNVIGVRLDVSDPGSCADAARTVVDAF-GALDVVCANAGIFPEARLDTMTPEQL 143
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS--GSI----YGATKAA 173
S+++ N + T + Q L ASG G ++ SS+ G G YGA+KAA
Sbjct: 144 SEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSI-----TGPVTGYPGWSHYGASKAA 198
Query: 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEV 233
R A E A + N++ P T + + E E++ + P+ +G P ++
Sbjct: 199 QLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGE--EYISGMARSIPMGMLGSPVDI 256
Query: 234 ASLVAYLCLPAASYITGQIISVDGG 258
L A+L A YITGQ I VDGG
Sbjct: 257 GHLAAFLATDEAGYITGQAIVVDGG 281
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 7e-64
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 16/258 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L G AL TG RGIG+ EL GA VV + + + E + G
Sbjct: 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 77
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + P + L + S F G L+ +++N G + +E + E + K+ N +
Sbjct: 78 ADISKPSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFF 136
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAKDNIR 191
+ Q + G I+ SS+ + ++Y +KAA+ R A + +
Sbjct: 137 VAQQGLKHCRRGG--RIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 194
Query: 192 TNSVAPWYTKTSLVERL-----------LENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
N +AP KT + + + ++ + + PL+R+G P ++ V+ L
Sbjct: 195 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 254
Query: 241 CLPAASYITGQIISVDGG 258
C + +I GQ+I + GG
Sbjct: 255 CQEESEWINGQVIKLTGG 272
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 1e-63
Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 12/253 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ G +VTG +RGIG+ +L GA V+ R+ L +E QS G VC
Sbjct: 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-------KPTIEYSAEEYSKIMTTN 126
D++ + L ++V + G+L++LVNN ++ K E A + I
Sbjct: 62 DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
Y L+ +G G IV ISS G L ++ YG KAA ++L + A E
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF-NVPYGVGKAACDKLAADCAHELR 180
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIART--PLQRVGE-PEEVASLVAYLCL- 242
+ + S+ P +T L++ + +E + + + E E V L
Sbjct: 181 RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATD 240
Query: 243 PAASYITGQIISV 255
P ++G+++
Sbjct: 241 PNILSLSGKVLPS 253
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 1e-63
Identities = 56/279 (20%), Positives = 92/279 (32%), Gaps = 32/279 (11%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVV-------HTCSRNEVELNKCLKEWQSKGF 66
+L G T +TG +RGIG A A GA V + ++ + G
Sbjct: 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62
Query: 67 VVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTN 126
CD DQ + F G ++ILVNN + T++ + + + N
Sbjct: 63 QGLALKCDIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVN 121
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACE 184
++ Q P L + I+ ++ L+ G + Y K M+ +T LA E
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAE 181
Query: 185 WAKDNIRTNSVAP-WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
+ + N++ P T + L PE +A +
Sbjct: 182 FGPQGVAINALWPRTVIATDAINMLPG-----------VDAAACRRPEIMADAAHAVLTR 230
Query: 244 AASYITGQIISVDGGFTANGF--------NPGIRL--DF 272
A+ GQ + D G +P L D
Sbjct: 231 EAAGFHGQFLIDDEVLAQAGITDLSGYAVDPQRALLPDL 269
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 1e-63
Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-------------VVHTCSRNEVELNKCLKEW 61
L+G A +TG RG G+A +A GA V + +L++ ++
Sbjct: 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 62 QSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
++ + +V D D+ K++ + + G+L+I+V N G + + + E++
Sbjct: 69 EAANRRIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRD 127
Query: 122 IMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+M N T++ P + G GSI+ ISS G+ Y A+K A+ L R
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARA 187
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVE--------RLLENKEFVDKVIARTPLQRVGEPEE 232
A E K +IR NSV P T + + +E + V+ V EPE+
Sbjct: 188 FAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPED 247
Query: 233 VASLVAYLCLPAASYITGQIISVDGGFTA 261
+A V +L + +T I VD G T
Sbjct: 248 IADTVCWLASDESRKVTAAQIPVDQGSTQ 276
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 199 bits (507), Expect = 3e-63
Identities = 59/255 (23%), Positives = 101/255 (39%), Gaps = 11/255 (4%)
Query: 3 NAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62
E+ + S A+VTG G+G+A LAG G V R L + E
Sbjct: 14 GTENLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG 73
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSK 121
V D PD L KF G++++L NN GT P + + ++ +
Sbjct: 74 DDALCV---PTDVTDPDSVRALFTATVEKF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQ 129
Query: 122 IMTTNFESTYHLCQLVYPLLKASGV--GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
++ TN + Q + ++KA G I+ S+ S + Y ATK A+ LT+
Sbjct: 130 VVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTK 189
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
+ + + +I + T + +++ V + ++ V + VAS V Y
Sbjct: 190 STSLDGRVHDIACGQIDIGNADTPMAQKMKAG---VPQADLSIKVEPVMDVAHVASAVVY 246
Query: 240 LC-LPAASYITGQII 253
+ LP + + I
Sbjct: 247 MASLPLDANVQFMTI 261
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 198 bits (505), Expect = 8e-63
Identities = 72/252 (28%), Positives = 132/252 (52%), Gaps = 17/252 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ ALVTG RGIG+ + LA + V SR + + + E +S G+ SG
Sbjct: 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFESTY 131
D + ++ ++I ++ ++ ++ILVNN G I + + +E+ ++ TN S +
Sbjct: 101 DVSKKEEISEVINKILTEH-KNVDILVNNAG--ITRDNLFLRMKNDEWEDVLRTNLNSLF 157
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
++ Q + ++ G I+ ISS+ GL +G++ Y ++KA + T++LA E A
Sbjct: 158 YITQPISKRMINNRY-GRIINISSIVGL----TGNVGQANYSSSKAGVIGFTKSLAKELA 212
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
NI N++AP + + + +++ E + +I+ P R+G PEEVA+L +L +
Sbjct: 213 SRNITVNAIAPGFISSDMTDKISE--QIKKNIISNIPAGRMGTPEEVANLACFLSSDKSG 270
Query: 247 YITGQIISVDGG 258
YI G++ +DGG
Sbjct: 271 YINGRVFVIDGG 282
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 8e-63
Identities = 73/250 (29%), Positives = 107/250 (42%), Gaps = 8/250 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
LVTGG+RGIG A A G V + N + + G
Sbjct: 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + V +F G+L+ LVNN G + + E S E +++ N +
Sbjct: 84 DVGNAADIAAMFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSIL 142
Query: 133 LCQLVYPLL---KASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ + G+IV +SS L Y A+KAA++ T LA E A +
Sbjct: 143 CAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
IR N+V P +T L + ++ P+QR G PEEVA + YL P+ASY+
Sbjct: 203 GIRVNAVRPGIIETDLHASGGL-PDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYV 261
Query: 249 TGQIISVDGG 258
TG I++V GG
Sbjct: 262 TGSILNVSGG 271
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 196 bits (501), Expect = 9e-63
Identities = 82/251 (32%), Positives = 140/251 (55%), Gaps = 14/251 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
LKG TA+VTG +RG+G+A +L +GA +V S L+ +E+++ G V +
Sbjct: 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D +P+ E +++ F G+++ILVNN G ++ S +++ ++ TN +S Y
Sbjct: 62 GDVKNPEDVENMVKTAMDAF-GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYL 120
Query: 133 LCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAK 187
+ V +LK G I+ I+S+ G+ G+ Y A+KA + T+++A E+A
Sbjct: 121 CTKAVSKIMLKQ-KSGKIINITSIAGII----GNAGQANYAASKAGLIGFTKSIAKEFAA 175
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
I N+VAP KT + + L + + + + PL+R G PEEVA++V +L ++Y
Sbjct: 176 KGIYCNAVAPGIIKTDMTDVLPD--KVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNY 233
Query: 248 ITGQIISVDGG 258
ITGQ+I++DGG
Sbjct: 234 ITGQVINIDGG 244
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 2e-62
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 12/258 (4%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK 64
+ + A VTGG GIG + + L G VV C N K L++ ++
Sbjct: 2 AHHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL 61
Query: 65 GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMT 124
GF S + D ++ +V ++ G++++LVNN G + + E++ ++
Sbjct: 62 GFDFYASEGNVGDWDSTKQAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWQAVID 120
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRN 180
TN S +++ + V + G G I+ ISSV G G Y KA ++ T +
Sbjct: 121 TNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----GQFGQTNYSTAKAGIHGFTMS 176
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
LA E A + N+V+P Y T +V+ + + ++K++A P++R+G P+E+ S+VA+L
Sbjct: 177 LAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWL 234
Query: 241 CLPAASYITGQIISVDGG 258
+ + TG S++GG
Sbjct: 235 ASEESGFSTGADFSLNGG 252
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 9e-62
Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 17/252 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL ALVTG +RGIG LA GA V + ++ K + KGF G V
Sbjct: 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
+ + + + E+ ++ ++ILVNN G I + + S +E+ ++ TN S +
Sbjct: 62 NISDIESIQNFFAEIKAEN-LAIDILVNNAG--ITRDNLMMRMSEDEWQSVINTNLSSIF 118
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
+ + ++K G I+ I SV G +G+ Y A KA + +++LA E A
Sbjct: 119 RMSKECVRGMMKKRW-GRIISIGSVVGS----AGNPGQTNYCAAKAGVIGFSKSLAYEVA 173
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
NI N VAP + T + ++L + E + + P ++GEP+++A+ VA+L A
Sbjct: 174 SRNITVNVVAPGFIATDMTDKLTD--EQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAK 231
Query: 247 YITGQIISVDGG 258
YITGQ + V+GG
Sbjct: 232 YITGQTLHVNGG 243
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 1e-61
Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 24/259 (9%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSV 72
+ G ALVTG +GIG+A E L GA V N +C +
Sbjct: 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD A Q ++V F G+L+ILVNN G N + + + K + N S
Sbjct: 65 CDVADQQQLRDTFRKVVDHF-GRLDILVNNAGVN--------NEKNWEKTLQINLVSVIS 115
Query: 133 LCQLVYPLLKASGVGS---IVFISSVGGLSHVGSGSIYGATKAAMNQLTRN--LACEWAK 187
L + G I+ +SS+ GL V +Y A+K + TR+ LA
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 175
Query: 188 DNIRTNSVAPWYTKTSLVERLLENK------EFVDKVIARTPLQRVGEPEEVASLVAYLC 241
+R N++ P + T+++E + + + E+ D + + +P +A+ + L
Sbjct: 176 SGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 235
Query: 242 LPAASYITGQIISVDGGFT 260
A + G I+ +
Sbjct: 236 EDDA--LNGAIMKITTSKG 252
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 1e-61
Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 9/245 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
LK L+TG GIG+AT+E A GA + C E L + + + V
Sbjct: 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV-----M 56
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A P E+ E + G+L+ +V+ G + E++ ++ N ++ +
Sbjct: 57 DVADPASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLV 115
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ ++ GSIV +S L ++G + Y A+ A + LTR LA E + IR N
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYLGNLGQAN-YAASMAGVVGLTRTLALELGRWGIRVN 174
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253
++AP + +T + ++ E + +K IA TPL R G+P EVA +L +S+ITGQ++
Sbjct: 175 TLAPGFIETRMTAKVPE--KVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVL 232
Query: 254 SVDGG 258
VDGG
Sbjct: 233 FVDGG 237
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 193 bits (494), Expect = 2e-61
Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 17/252 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L A+VTG +RGIG+A ELA GA+V + E ++ G G+V
Sbjct: 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
+ + L++ +F G LN+LVNN G I + + +E+ ++ TN ++ +
Sbjct: 85 NVNDATAVDALVESTLKEF-GALNVLVNNAG--ITQDQLAMRMKDDEWDAVIDTNLKAVF 141
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
L + V P++KA G G IV I+SV G +G+ Y A KA + +TR LA E
Sbjct: 142 RLSRAVLRPMMKARG-GRIVNITSVVGS----AGNPGQVNYAAAKAGVAGMTRALAREIG 196
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
I N VAP + T + + L + E + + PL R+G PE++A VA+L P A
Sbjct: 197 SRGITVNCVAPGFIDTDMTKGLPQ--EQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAG 254
Query: 247 YITGQIISVDGG 258
YITG + V+GG
Sbjct: 255 YITGTTLHVNGG 266
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 2e-61
Identities = 78/250 (31%), Positives = 128/250 (51%), Gaps = 14/250 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
LKG ALVTG +RGIG+A +LA GA VV + NE + N+ + E + G
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A+ + ++++ F G+++ILVNN G + EE+ ++ TN + +
Sbjct: 62 DVANAEDVTNMVKQTVDVF-GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLC 120
Query: 134 CQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKD 188
+ V +++ G IV I+SV G++ G+ Y A KA + LT+ A E A
Sbjct: 121 TKAVSRFMMRQRH-GRIVNIASVVGVT----GNPGQANYVAAKAGVIGLTKTSAKELASR 175
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
NI N++AP + T + + L E +++ P + GE +++A+ V + + YI
Sbjct: 176 NITVNAIAPGFIATDMTDVLDE--NIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYI 233
Query: 249 TGQIISVDGG 258
TGQ ++VDGG
Sbjct: 234 TGQTLNVDGG 243
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 3e-61
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 11/263 (4%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59
M E+ + A VTGG G+G A L G V + S ++ L
Sbjct: 9 MGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLM 68
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+ G D A + E+ ++V + F GK+++L+NN G ++ + ++
Sbjct: 69 HERDAGRDFKAYAVDVADFESCERCAEKVLADF-GKVDVLINNAGITRDATFMKMTKGDW 127
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMN 175
+M T+ ++ +++ + + G IV I SV G G+ Y + KA ++
Sbjct: 128 DAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR----GAFGQANYASAKAGIH 183
Query: 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVAS 235
T+ LA E AK I N+V+P Y T++VE + + K++ + P+ R+G P+EVA+
Sbjct: 184 GFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ-DVLEAKILPQIPVGRLGRPDEVAA 242
Query: 236 LVAYLCLPAASYITGQIISVDGG 258
L+A+LC A ++TG ++++GG
Sbjct: 243 LIAFLCSDDAGFVTGADLAINGG 265
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 4e-61
Identities = 59/260 (22%), Positives = 95/260 (36%), Gaps = 20/260 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL-------KEWQSKGF 66
SL+G T ++GG+RGIG A + +A GA V +++ K KE + G
Sbjct: 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65
Query: 67 VVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTN 126
V D D + + +F G ++I VNN E + + +
Sbjct: 66 QALPIVGDIRDGDAVAAAVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQ 124
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEW 185
TY + Q P +K I+ +S L + Y K M +A E
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184
Query: 186 AKDNIRTNSVAPWYT-KTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
I +N++ P T T+ V+ LL + R +PE A +
Sbjct: 185 RDAGIASNTLWPRTTVATAAVQNLLG---------GDEAMARSRKPEVYADAAYVVLNKP 235
Query: 245 ASYITGQIISVDGGFTANGF 264
+SY TG + + +G
Sbjct: 236 SSY-TGNTLLCEDVLLESGV 254
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 5e-61
Identities = 44/256 (17%), Positives = 82/256 (32%), Gaps = 29/256 (11%)
Query: 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSG 70
R S LV GG+ +G V+ + E
Sbjct: 16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------------HS 63
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFES 129
+ ++ + +I+++ SK K++ V G + + + + ++ N S
Sbjct: 64 FTIKDSGEEEIKSVIEKINSKS-IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYS 122
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--K 187
+ + LL G V + L+ YGATKAA + + ++LA E
Sbjct: 123 AFASAHIGAKLLNQGG--LFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLP 180
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
+ + P T + + + F D TPL V E L + +
Sbjct: 181 AGSTSLGILPVTLDTPTNRKYMSDANFDD----WTPLSEVAEK-----LFEWSTNSDSRP 231
Query: 248 ITGQIISVD--GGFTA 261
G ++ + T
Sbjct: 232 TNGSLVKFETKSKVTT 247
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 5e-61
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 22/259 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS---- 69
L+ ALVTG GIG+A LAG GA V C + + ++ G
Sbjct: 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63
Query: 70 ---GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMT 124
D + L+++V + F+ +++V+ G I + + S +++ K++
Sbjct: 64 NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAG--ITQDEFLLHMSEDDWDKVIA 121
Query: 125 TNFESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTR 179
N + T+ + Q L+ GSI+ ISS+ G G++ Y A+KA + LT+
Sbjct: 122 VNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV----GNVGQTNYAASKAGVIGLTQ 177
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
A E + IR NSV P + T + +++ + + VDK+ P+ +G+PE+VA +VA+
Sbjct: 178 TAARELGRHGIRCNSVLPGFIATPMTQKVPQ--KVVDKITEMIPMGHLGDPEDVADVVAF 235
Query: 240 LCLPAASYITGQIISVDGG 258
L + YITG + V GG
Sbjct: 236 LASEDSGYITGTSVEVTGG 254
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 9e-61
Identities = 78/252 (30%), Positives = 134/252 (53%), Gaps = 18/252 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ALVTG +RGIG++ +LA G V + ++ + ++E ++KG
Sbjct: 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
+ A D+ + +I+EV S+F G L++LVNN G I + + +E+ ++ TN + +
Sbjct: 62 NVADADEVKAMIKEVVSQF-GSLDVLVNNAG--ITRDNLLMRMKEQEWDDVIDTNLKGVF 118
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
+ Q +L+ G+I+ +SSV G G+ Y ATKA + LT++ A E A
Sbjct: 119 NCIQKATPQMLRQRS-GAIINLSSVVGAV----GNPGQANYVATKAGVIGLTKSAARELA 173
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
I N+VAP + + + + L + E ++++ + PL R G+ ++A+ VA+L A
Sbjct: 174 SRGITVNAVAPGFIVSDMTDALSD--ELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK 231
Query: 247 YITGQIISVDGG 258
YITGQ I V+GG
Sbjct: 232 YITGQTIHVNGG 243
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 1e-60
Identities = 68/283 (24%), Positives = 110/283 (38%), Gaps = 28/283 (9%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59
+ S ++ A+VTG + IG+A +L G VV +
Sbjct: 7 HHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLAD 66
Query: 60 EWQS----KGFVVSGSVCDAAS-PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY 114
E V + ++ P E++I F G+ ++LVNN P ++
Sbjct: 67 ELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQG 125
Query: 115 SAE----------EYSKIMTTNFESTYHLCQLVYPLLKASGV------GSIVFISSVGGL 158
E + ++++ TN + + L K + SIV +
Sbjct: 126 DHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVD 185
Query: 159 SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKV 218
+ S+Y K A+ LT++ A E A IR N VAP + + +E DK
Sbjct: 186 QPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAM----GEEEKDKW 241
Query: 219 IARTPL-QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFT 260
+ PL +R E++A V +L +A YITG II VDGG +
Sbjct: 242 RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 1e-60
Identities = 60/274 (21%), Positives = 104/274 (37%), Gaps = 28/274 (10%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQS----K 64
+S + + A++TGG R IG + L G VV +E + + E +
Sbjct: 4 TSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGS 63
Query: 65 GFVVSGSVCDAAS-PDQREKLIQEVGSKFNGKLNILVNNVG-----------TNIRKPTI 112
+ G + ++S D E +I F G+ ++LVNN
Sbjct: 64 AVLCKGDLSLSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADA 122
Query: 113 EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-----GSIVFISSVGGLSHVGSGSIY 167
+ + +++ +N + L + G S+V + + +Y
Sbjct: 123 KPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVY 182
Query: 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQR- 226
K A+ LTR A E A +IR N+VAP + +E ++ + PL +
Sbjct: 183 TMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQS 238
Query: 227 VGEPEEVASLVAYLCLPAASYITGQIISVDGGFT 260
++A +A+L A YITG + VDGG
Sbjct: 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 2e-60
Identities = 78/252 (30%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L ALVTG +RGIG+A ELA GA V + + ++ + + G
Sbjct: 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + E L V ++ G+L++LVNN G + +++ ++ N +
Sbjct: 85 ADVSQESEVEALFAAVIERW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFL 143
Query: 133 LCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAK 187
+ +LK G I+ I+SV G G+ Y A KA + LT+ +A E A
Sbjct: 144 CSRAAAKIMLKQRS-GRIINIASVVGE----MGNPGQANYSAAKAGVIGLTKTVAKELAS 198
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL-PAAS 246
I N+VAP + T + L +K++ PL R GE EVA +V +L PAA+
Sbjct: 199 RGITVNAVAPGFIATDMTSELAA-----EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAA 253
Query: 247 YITGQIISVDGG 258
YITGQ+I++DGG
Sbjct: 254 YITGQVINIDGG 265
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 3e-60
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 19/259 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGL---GAVVHTCSRNEVELNKCLKEWQSK--GFVV 68
L ++TG +RG G+A +LA L G+V+ +R+E L + +E ++ V
Sbjct: 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62
Query: 69 SGSVCDAASPDQREKLIQEV---GSKFNGKLNILVNNVGT---NIRKPTIEYSAEEYSKI 122
+ D + ++L+ V + +L+NN T + E +
Sbjct: 63 VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122
Query: 123 MTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
N S L + S ++V ISS+ L +Y A KAA + L +
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENK---EFVDKVIARTPLQRVGEPEEVASLV 237
LA E + ++R S AP + + E E K+ + + A +
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240
Query: 238 AYLCLPAASYITGQIISVD 256
L L ++ +G +
Sbjct: 241 LGL-LQKDTFQSGAHVDFY 258
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 5e-60
Identities = 86/253 (33%), Positives = 130/253 (51%), Gaps = 18/253 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L+G +LVTG TRGIG+A E+LA G+ V+ T + E + G G
Sbjct: 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFEST 130
+ S + K +E+ + ++ILVNN G I + + S ++ +++ N T
Sbjct: 64 MNLLSEESINKAFEEIYNLV-DGIDILVNNAG--ITRDKLFLRMSLLDWEEVLKVNLTGT 120
Query: 131 YHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEW 185
+ + Q ++K G IV ISSV G + G++ Y TKA + T++LA E
Sbjct: 121 FLVTQNSLRKMIKQRW-GRIVNISSVVGFT----GNVGQVNYSTTKAGLIGFTKSLAKEL 175
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
A N+ N+VAP + +T + L E E K + PL R G PEEVA++V +LC A
Sbjct: 176 APRNVLVNAVAPGFIETDMTAVLSE--EIKQKYKEQIPLGRFGSPEEVANVVLFLCSELA 233
Query: 246 SYITGQIISVDGG 258
SYITG++I V+GG
Sbjct: 234 SYITGEVIHVNGG 246
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 1e-59
Identities = 67/269 (24%), Positives = 110/269 (40%), Gaps = 22/269 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-------------VVHTCSRNEVELNKCLKE 60
SL+G A +TG RG G++ LA GA V + +L++ +
Sbjct: 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
+ +G V D +L+ + +F G+L+++V N G E + E++
Sbjct: 72 VEDQGRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWD 130
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
++ N T+ + P + +G GSIV +SS GL Y A+K + LT
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDK-------VIARTPLQRVGEPEE 232
LA E + IR NS+ P+ +T ++E + F +E
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADE 250
Query: 233 VASLVAYLCLPAASYITGQIISVDGGFTA 261
VA +VA+L + +TG I VD G
Sbjct: 251 VADVVAWLAGDGSGTLTGTQIPVDKGALK 279
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 1e-59
Identities = 46/246 (18%), Positives = 86/246 (34%), Gaps = 17/246 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+ +VTG G+G+A L G V R L + + + V D
Sbjct: 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGI---VAD 57
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A + + G ++++ GT P Y+AE+ ++M +N ST +
Sbjct: 58 LAHHEDVDVAFAAAVEWG-GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
Q L+ G G + + S + S+Y A+K M +L E +R +
Sbjct: 117 QQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVN 175
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY-LCLPAASYITGQII 253
+ P ++ + PE+ A+ + L ++ ++T I
Sbjct: 176 LYPSGIRSEFWDN-----------TDHVDPSGFMTPEDAAAYMLDALEARSSCHVTDLFI 224
Query: 254 SVDGGF 259
+ G
Sbjct: 225 GRNEGH 230
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 1e-59
Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL G A+VTG +RGIG A +L LGA V +R+ +L +E + G C
Sbjct: 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + D V + G+ ++LVNN G P E+ ++ N ++ Y
Sbjct: 86 DLSHSDAIAAFATGVLAAH-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYL 144
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L + P + A+ G I+ ISS+ G + V G+ Y A+K +N L + A E + +R
Sbjct: 145 LLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRV 204
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
+ VAP +T EF + A+ EP+++A +VA L A ++
Sbjct: 205 SLVAPGSVRT----------EFGVGLSAKKSALGAIEPDDIADVVALLATQADQSFISEV 254
Query: 253 I 253
+
Sbjct: 255 L 255
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 188 bits (480), Expect = 1e-59
Identities = 83/252 (32%), Positives = 131/252 (51%), Gaps = 20/252 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L+G ALVTG +RGIG+A E LA GA V + +E G +
Sbjct: 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM---AL 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
+ +P+ E +++ + +F G ++ILVNN G I + + EE+S IM TN S +
Sbjct: 63 NVTNPESIEAVLKAITDEF-GGVDILVNNAG--ITRDNLLMRMKEEEWSDIMETNLTSIF 119
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
L + V ++K G I+ + SV G G+ Y A KA + T+++A E A
Sbjct: 120 RLSKAVLRGMMKKRQ-GRIINVGSVVGTM----GNAGQANYAAAKAGVIGFTKSMAREVA 174
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
+ N+VAP + +T + + L + E +A+ P R+G+P E+AS VA+L P A+
Sbjct: 175 SRGVTVNTVAPGFIETDMTKALND--EQRTATLAQVPAGRLGDPREIASAVAFLASPEAA 232
Query: 247 YITGQIISVDGG 258
YITG+ + V+GG
Sbjct: 233 YITGETLHVNGG 244
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 188 bits (481), Expect = 2e-59
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 16/250 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G ALVTG T GIG+A GA+V E +L + + FV
Sbjct: 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVF---SA 80
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ + ++L + + ++ILVNN G + +++ ++ N + L
Sbjct: 81 NLSDRKSIKQLAEVAEREM-EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTL 139
Query: 134 CQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKD 188
+ + +++ G I+ I+S+ G+ G+ Y A KA + ++ LA E A
Sbjct: 140 TRELIHSMMRRRY-GRIINITSIVGVV----GNPGQTNYCAAKAGLIGFSKALAQEIASR 194
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
NI N +AP + K+++ ++L E + + ++A P++R+G EE+A YL A+Y+
Sbjct: 195 NITVNCIAPGFIKSAMTDKLNE--KQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYL 252
Query: 249 TGQIISVDGG 258
TGQ + ++GG
Sbjct: 253 TGQTLHINGG 262
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 4e-59
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 15/247 (6%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
+VTG +RGIG+A L G V+ +R+ + K+ ++ G D +
Sbjct: 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
E +++ + G ++++VNN G I ++ +++ N + Q
Sbjct: 63 EADVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 138 Y-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDNIRT 192
++K G I+ I+SV GL G+I Y A KA + ++ A E A NI
Sbjct: 122 TKIMMKKRK-GRIINIASVVGL----IGNIGQANYAAAKAGVIGFSKTAAREGASRNINV 176
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL-PAASYITGQ 251
N V P + + + +L E + K++ PL R G+PE VA LV +L L PAASYITGQ
Sbjct: 177 NVVCPGFIASDMTAKLGE--DMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQ 234
Query: 252 IISVDGG 258
++DGG
Sbjct: 235 AFTIDGG 241
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 5e-59
Identities = 62/279 (22%), Positives = 108/279 (38%), Gaps = 34/279 (12%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV----------------HTCSRNEVELNKCL 58
++G A VTG RG G++ LA GA + + +L +
Sbjct: 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 59 KEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAE 117
+ + + D D + + + G+L+I+V N G N + S E
Sbjct: 69 DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEE 127
Query: 118 EYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176
++++++ N + + P + A G GSI+ SSVGGL Y A K +
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERL--------------LENKEFVDKVIART 222
L R E + IR NSV P + KT ++ ++ + ++
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL 247
Query: 223 PLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261
P+ EP ++++ V + A YITG + +D G
Sbjct: 248 PI-PWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 187 bits (478), Expect = 1e-58
Identities = 60/275 (21%), Positives = 114/275 (41%), Gaps = 30/275 (10%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV------------HTCSRNEVELNKCLKEWQ 62
++G A +TG RG G++ LA GA + +L + +++ +
Sbjct: 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSK 121
+ G + S D D + + + ++ G+L+I++ N + + +
Sbjct: 86 ALGRRIIASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRD 144
Query: 122 IMTTNFESTYHLCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
++ N + ++ P ++ GSIVF SS+GGL + Y A+K ++ L R
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERL--------------LENKEFVDKVIARTPLQR 226
+A E NIR N V P T ++ +E+ + + + P+
Sbjct: 205 MALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPY 264
Query: 227 VGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261
EP ++++ + +L A YITG + VDGG
Sbjct: 265 -VEPADISNAILFLVSDDARYITGVSLPVDGGALL 298
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 186 bits (474), Expect = 1e-58
Identities = 77/249 (30%), Positives = 125/249 (50%), Gaps = 21/249 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
++ LV +RGIG+A + L+ GA V C+RNE L + + VC
Sbjct: 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV---------VC 66
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
D K + + K +++ILV N G K E + E++ + + + F +
Sbjct: 67 DL------RKDLDLLFEKV-KEVDILVLNAG--GPKAGFFDELTNEDFKEAIDSLFLNMI 117
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ + P +K G G IV I+S +S + + + + A+ + L+ E A I
Sbjct: 118 KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGIT 177
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N VAP +T+T V+ LL E +V ++ P++R+ +PEE+AS+VA+LC ASY+TGQ
Sbjct: 178 VNCVAPGWTETERVKELLSE-EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQ 236
Query: 252 IISVDGGFT 260
I VDGG +
Sbjct: 237 TIVVDGGLS 245
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 185 bits (473), Expect = 2e-58
Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 28/262 (10%)
Query: 4 AESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS 63
++ + ++ + LVTGG RGIG A + LA G V R
Sbjct: 2 TATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----- 56
Query: 64 KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSK 121
G D D ++ V G + +LV+N G + + + E++ K
Sbjct: 57 ------GVEVDVTDSDAVDRAFTAVEEHQ-GPVEVLVSNAG--LSADAFLMRMTEEKFEK 107
Query: 122 IMTTNFESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQ 176
++ N + + Q + + G ++FI SV GL G Y A+KA +
Sbjct: 108 VINANLTGAFRVAQRASRSMQRNKF-GRMIFIGSVSGLW----GIGNQANYAASKAGVIG 162
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASL 236
+ R++A E +K N+ N VAP Y T + L E + P +RVG P EVA +
Sbjct: 163 MARSIARELSKANVTANVVAPGYIDTDMTRALDE--RIQQGALQFIPAKRVGTPAEVAGV 220
Query: 237 VAYLCLPAASYITGQIISVDGG 258
V++L ASYI+G +I VDGG
Sbjct: 221 VSFLASEDASYISGAVIPVDGG 242
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 5e-58
Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 20/250 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G T+L+TG + GIG A L LG+ V NE +L + + VC
Sbjct: 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE---VC 67
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ A+ ++ LI + L+ILV N G I +++ K++ N ++ + L
Sbjct: 68 NLANKEECSNLISKTS-----NLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFIL 122
Query: 134 CQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKD 188
+ +++ G I+ ISS+ G++ G+ Y A+KA + +T++L+ E A
Sbjct: 123 NREAIKKMIQKRY-GRIINISSIVGIA----GNPGQANYCASKAGLIGMTKSLSYEVATR 177
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
I N+VAP + K+ + ++L E + + ++ + PL G PE+VA VA+L ASYI
Sbjct: 178 GITVNAVAPGFIKSDMTDKLNE--KQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYI 235
Query: 249 TGQIISVDGG 258
TGQ + V+GG
Sbjct: 236 TGQTLHVNGG 245
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 1e-57
Identities = 60/287 (20%), Positives = 108/287 (37%), Gaps = 45/287 (15%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG----FVV 68
+ ALVTG + +G++ E L G V R+ E N ++ V
Sbjct: 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65
Query: 69 SGSVCDAASP--------------DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY 114
+ + A+ + +L+ + + G+ ++LVNN + P +
Sbjct: 66 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 124
Query: 115 SAEEY--------------SKIMTTNFESTYHLCQLVYPLLKASGV------GSIVFISS 154
+ + + + +N + Y L + + + SI+ +
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184
Query: 155 VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEF 214
+ +IY K A+ LTR+ A E A IR N V P + + +
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--DDMPP--AV 240
Query: 215 VDKVIARTPL-QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFT 260
+ ++ PL QR EV+ +V +LC A YITG + VDGG++
Sbjct: 241 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 2e-57
Identities = 46/253 (18%), Positives = 80/253 (31%), Gaps = 17/253 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L + GIG T EL R E + + ++
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 73 CD-AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + +KL++++ + ++IL+N G I + + + NF
Sbjct: 62 YDVTVPVAESKKLLKKIFDQL-KTVDILINGAG--ILDD------HQIERTIAINFTGLV 112
Query: 132 HLCQLVYPLL---KASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ + K G I I SV G + + +Y A+KAA+ T +LA
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
+ S+ P T+T LV + +V E+ +
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKA---IEANK 229
Query: 249 TGQIISVDGGFTA 261
G I +D G
Sbjct: 230 NGAIWKLDLGTLE 242
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 3e-57
Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 15/247 (6%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAA 76
AL+TG +RGIG+A LA G + +N + + +E + +G +V+ +
Sbjct: 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+ L+ + G L+ LVNN G + E++ ++ N + + +
Sbjct: 63 EAEAATALVHQAAEVL-GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTRE 121
Query: 137 VY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDNIR 191
++KA G IV I+SV G+ G+ Y A+KA + TR +A E+A+ I
Sbjct: 122 AVKLMMKARF-GRIVNITSVVGIL----GNPGQANYVASKAGLIGFTRAVAKEYAQRGIT 176
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+VAP + +T + ERL + E + + + P R G PEEVA VA+L A YITGQ
Sbjct: 177 VNAVAPGFIETEMTERLPQ--EVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQ 234
Query: 252 IISVDGG 258
+ VDGG
Sbjct: 235 TLCVDGG 241
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 4e-57
Identities = 60/287 (20%), Positives = 108/287 (37%), Gaps = 45/287 (15%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG----FVV 68
+ ALVTG + +G++ E L G V R+ E N ++ V
Sbjct: 43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102
Query: 69 SGSVCDAASP--------------DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY 114
+ + A+ + +L+ + + G+ ++LVNN + P +
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 161
Query: 115 SAEEY--------------SKIMTTNFESTYHLCQLVYPLLKASGV------GSIVFISS 154
+ + + + +N + Y L + + + SI+ +
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221
Query: 155 VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEF 214
+ +IY K A+ LTR+ A E A IR N V P + + +
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--DDMPP--AV 277
Query: 215 VDKVIARTPL-QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFT 260
+ ++ PL QR EV+ +V +LC A YITG + VDGG++
Sbjct: 278 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 1e-56
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 12/250 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV----ELNKCLKEWQSKGFVVS 69
LK ALVTGG GIG+A A GA V E ++ ++E K ++
Sbjct: 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFE 128
G D + L+ + G L+IL G P I+ ++E++ + N
Sbjct: 107 G---DLSDESFARSLVHKAREAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVF 162
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ + + Q PLL SI+ SS+ Y ATKAA+ +R LA + A+
Sbjct: 163 ALFWITQEAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
IR N VAP T+L + ++ + + +TP++R G+P E+A + YL +SY+
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV 280
Query: 249 TGQIISVDGG 258
T ++ V GG
Sbjct: 281 TAEVHGVCGG 290
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 1e-56
Identities = 76/273 (27%), Positives = 125/273 (45%), Gaps = 27/273 (9%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA------------VVHTCSRNEVELNKCLKEWQ 62
L+G A +TG RG G+ LA GA + + EL + ++ +
Sbjct: 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
+G + D + ++ E ++F G ++ILV+NVG + + + + +++S I
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDI 162
Query: 123 MTTNFESTYHLCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ TN +H C+ V P +++ GS++F+SS GL S Y A+K + L +L
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSL 222
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERLLENKEF-----------VDKVIARTPLQRV--G 228
A E + NIR NSV P T + K F ++ ++ L +
Sbjct: 223 ANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWV 282
Query: 229 EPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261
EPE+V++ VA+L A YI G I VDGG A
Sbjct: 283 EPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 2e-56
Identities = 58/283 (20%), Positives = 99/283 (34%), Gaps = 41/283 (14%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV------------HTCSRNEVELNKCLKEWQ 62
++ LVTGG RG G++ +LA GA + +L + E +
Sbjct: 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
G + D + + ++F GKL+++V N G I + ++
Sbjct: 68 KTGRKAYTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANAG--ICPLGAHLPVQAFADA 124
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-----------YGATK 171
+F + P L + SI+ SV GL Y K
Sbjct: 125 FDVDFVGVINTVHAALPYLTSGA--SIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182
Query: 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERL---------LENKEFVDKVIART 222
++ T LA + A +IR N + P T ++ LE D ++A
Sbjct: 183 QLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFP 242
Query: 223 PLQR----VGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261
+Q E ++++ V +L + Y+TG VD G
Sbjct: 243 AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 2e-56
Identities = 38/253 (15%), Positives = 72/253 (28%), Gaps = 26/253 (10%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
S + LV GG +G V+ V + E E S +V +
Sbjct: 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------ASASVIVKMTDS 56
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYH 132
DQ + ++ K++ ++ G + + + + ++
Sbjct: 57 FTEQADQVTAEVGKLLGD--QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTI 114
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--KDNI 190
L LK G + + L YG K A++QL ++LA + +
Sbjct: 115 SSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
+V P T + + + E + +G
Sbjct: 173 AAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLEFLVETFHDWITGNKRPNSG 222
Query: 251 QIISV--DGGFTA 261
+I V G T
Sbjct: 223 SLIQVVTTDGKTE 235
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 2e-56
Identities = 80/252 (31%), Positives = 117/252 (46%), Gaps = 28/252 (11%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
S + LVTGG RGIG A A G V R+ L C
Sbjct: 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL-----------AVKC 66
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
D +Q E+ +E+ G + +L+ N G + K + S E+++ ++ TN T+
Sbjct: 67 DITDTEQVEQAYKEIEETH-GPVEVLIANAG--VTKDQLLMRMSEEDFTSVVETNLTGTF 123
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
+ + +L+A G +V ISSV GL GS Y A+KA + R+LA E
Sbjct: 124 RVVKRANRAMLRAKK-GRVVLISSVVGLL----GSAGQANYAASKAGLVGFARSLARELG 178
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
NI N VAP + T + + L + E ++++ PL R PEE+A+ V +L AS
Sbjct: 179 SRNITFNVVAPGFVDTDMTKVLTD--EQRANIVSQVPLGRYARPEEIAATVRFLASDDAS 236
Query: 247 YITGQIISVDGG 258
YITG +I VDGG
Sbjct: 237 YITGAVIPVDGG 248
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 3e-56
Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 26/272 (9%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEV---------ELNKCLKEWQ 62
+G TAL+TGG RG+G++ LA GA + C ++V +L + + +
Sbjct: 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
G + D E + E G ++I + N G + E + ++ ++
Sbjct: 68 KTGRRCISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEV 126
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
+ TN T++ V P + G IV +SS+ G S + + Y ++K + LT+ A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186
Query: 183 CEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIART-------------PLQRVGE 229
+ I N+VAP +T + + T +
Sbjct: 187 HDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLK 246
Query: 230 PEEVASLVAYLCLPAASYITGQIISVDGGFTA 261
PEEV V +L A+S+ITG ++ +D G TA
Sbjct: 247 PEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 1e-55
Identities = 79/256 (30%), Positives = 123/256 (48%), Gaps = 16/256 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV---ELNKCLKEWQSKGFVVSG 70
LKG L+TGG GIG+A A GA + E E + +++ K ++ G
Sbjct: 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFES 129
D + + ++QE + G LNILVNNV + +E +AE+ K N S
Sbjct: 105 ---DLSDEQHCKDIVQETVRQL-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFS 160
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAK 187
+H+ + LK I+ +S+ G+ ++ Y ATK A+ TR+L+ +
Sbjct: 161 YFHVTKAALSHLKQGD--VIINTASIVAYE--GNETLIDYSATKGAIVAFTRSLSQSLVQ 216
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
IR N VAP T L+ +++ V + + P+QR G+P E+A YL +SY
Sbjct: 217 KGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSY 275
Query: 248 ITGQIISVDGGFTANG 263
+TGQ+I V+GG NG
Sbjct: 276 VTGQMIHVNGGVIVNG 291
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 1e-55
Identities = 75/272 (27%), Positives = 105/272 (38%), Gaps = 30/272 (11%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA------------VVHTCSRNEVELNKCLKEWQ 62
L G A +TG RG G+A LA GA V EL +K +
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
G + D + +Q + G+L+I+V N G I + + + +
Sbjct: 71 DIGSRIVARQADVRDRESLSAALQAGLDEL-GRLDIVVANAG--I--APMSAGDDGWHDV 125
Query: 123 MTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSI----YGATKAAMNQL 177
+ N YH ++ P L G GSIV ISS GL+ VGS Y A K + L
Sbjct: 126 IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGL 185
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRV--------GE 229
R A A IR NS+ P +T ++ + A +
Sbjct: 186 MRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLA 245
Query: 230 PEEVASLVAYLCLPAASYITGQIISVDGGFTA 261
PE+VA+ VA+L A YITG + VD GF
Sbjct: 246 PEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 1e-52
Identities = 49/256 (19%), Positives = 98/256 (38%), Gaps = 16/256 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---VELNKCLKEWQSKGFVVSG 70
+ A++TG ++GIG LA G V +R++ +++ +
Sbjct: 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D + + I+++ K+ G ++ILVN + + + + KIM N +
Sbjct: 64 LPLDITDCTKADTEIKDIHQKY-GAVDILVNAAAMFMDGS-LSEPVDNFRKIMEINVIAQ 121
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
Y + + V ++K G I ++S G IYG+TK A+ L +L E A I
Sbjct: 122 YGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC-LPAASYIT 249
R ++ P + T + K + + +P+++ + + L L I
Sbjct: 182 RVTTLCPGWVNT----------DMAKKAGTPFKDEEMIQPDDLLNTIRCLLNLSENVCIK 231
Query: 250 GQIISVDGGFTANGFN 265
+ + +
Sbjct: 232 DIVFEMKKSIIEGHHH 247
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 2e-52
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 19/242 (7%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
L+TG +GIG+A E A V+ SR +L K E +++G +
Sbjct: 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + +L + ++ G ++ LVNN G + + E++ M TN + T+
Sbjct: 64 TADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
L Q ++ L++ G I FI+SV SIY +K L + K N+R
Sbjct: 123 FLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR 182
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
V P T + ++ + + + PE++A+ V L + + +
Sbjct: 183 ITDVQPGAVYTPMWGKVDDEMQ-----------ALMMMPEDIAAPVVQAYLQPSRTVVEE 231
Query: 252 II 253
II
Sbjct: 232 II 233
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 6e-52
Identities = 58/259 (22%), Positives = 94/259 (36%), Gaps = 21/259 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL-------KEWQSKGF 66
L G T +TG +RGIG+A + A GA + ++ K L +E ++ G
Sbjct: 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 67 VVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTN 126
+ D Q +++ KF G ++ILVNN T++ + +M N
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVN 160
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACE 184
TY + P LK S V I+ IS L+ V Y K M+ +A E
Sbjct: 161 TRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEE 220
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
+ K I N++ P + +L + + + +A AY
Sbjct: 221 F-KGEIAVNALWPKTAIHTAAMDMLGGPG---------IESQCRKVDIIAD-AAYSIFQK 269
Query: 245 ASYITGQIISVDGGFTANG 263
TG + + G
Sbjct: 270 PKSFTGNFVIDENILKEEG 288
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 6e-52
Identities = 35/257 (13%), Positives = 84/257 (32%), Gaps = 27/257 (10%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+ +V GG +G A +E G V + + +V G +
Sbjct: 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-------ADSNILVDG---N 50
Query: 75 AASPDQREKLIQEVGSKFN-GKLNILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYH 132
+Q + ++++ S +++ + G + + ++ + S+
Sbjct: 51 KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--KDNI 190
+L LK G + + + S YG KAA++ LT +LA + + DN
Sbjct: 111 AAKLATTHLKPGG--LLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNS 168
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL-PAASYIT 249
++ P T + + + N + ++ + ++ +
Sbjct: 169 AVLTIMPVTLDTPMNRKWMPNADH----------SSWTPLSFISEHLLKWTTETSSRPSS 218
Query: 250 GQIISVDGGFTANGFNP 266
G ++ + + P
Sbjct: 219 GALLKITTENGTSTITP 235
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 3e-51
Identities = 67/256 (26%), Positives = 103/256 (40%), Gaps = 29/256 (11%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L G A+VTG RGIG E A GA V +L + +
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALT----- 265
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYSKIMTTNF 127
D + D +K+ V GK++ILVNN G + + ++ N
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLAN-----MDEKRWDAVIAVNL 320
Query: 128 ESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLA 182
+ L + + G G ++ +SS+ G++ G+ Y TKA M L LA
Sbjct: 321 LAPQRLTEGLVGNGTIGEG-GRVIGLSSMAGIA----GNRGQTNYATTKAGMIGLAEALA 375
Query: 183 CEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
A I N+VAP + +T + E + + L + G+P +VA L+AY
Sbjct: 376 PVLADKGITINAVAPGFIETKMTEAI--PLATREVGRRLNSLFQGGQPVDVAELIAYFAS 433
Query: 243 PAASYITGQIISVDGG 258
PA++ +TG I V G
Sbjct: 434 PASNAVTGNTIRVCGQ 449
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 3e-51
Identities = 46/242 (19%), Positives = 87/242 (35%), Gaps = 7/242 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ + T V G IG ++ A G V RN +L + E ++ G +
Sbjct: 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
DA + D+ + + L + + NVG N+ P +E + + K+ + +
Sbjct: 64 DARNEDEVTAFLNAA--DAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVS 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR-T 192
+ L+ A G G I F + L + + + K + + +++A E NI
Sbjct: 122 GRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVA 181
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL-PAASYITGQ 251
+ + T+ V E + A + P VA L P +++
Sbjct: 182 HLIIDSGVDTAWVRERREQ---MFGKDALANPDLLMPPAAVAGAYWQLYQQPKSAWTFEM 238
Query: 252 II 253
I
Sbjct: 239 EI 240
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 6e-48
Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLK A+VTG T G+G V++L+ V RN L + +
Sbjct: 2 SLKKKIAVVTGATGGMGIEIVKDLSRDHIVY-ALGRNPEHLAALAEIEGVEPIE-----S 55
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D E + ++ ++ LV+ S E+ + N L
Sbjct: 56 DIVKEVLEEGGVDKL-KNL-DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAEL 113
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ + P L+A+ G +++I+S G +IY A+K A+ L E A + IR +
Sbjct: 114 SRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL-CLPAASYITGQI 252
+V+P T T +++ L +D + EP+E+A+ + ++ + IT
Sbjct: 173 TVSPGPTNTPMLQGL------MDSQGTNFRPEIYIEPKEIANAIRFVIDAGETTQITNVD 226
Query: 253 I 253
+
Sbjct: 227 V 227
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 1e-47
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 22/257 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+G +A+V+GG G+G+ATV L G V + E G +
Sbjct: 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTN 84
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI-----EYSAEEYSKIMTTNFES 129
S D I+ +V + G + + + ++K +
Sbjct: 85 VTSEDSVLAAIEAANQLG-RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143
Query: 130 TYHLCQLVYPLLKASGV------GSIVFISSVGGLS-HVGSGSIYGATKAAMNQLTRNLA 182
TY++ +LV + A+ G++V +S+ G +G + Y A KA + LT A
Sbjct: 144 TYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTA-YAAAKAGVIGLTIAAA 202
Query: 183 CEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLVAYLC 241
+ + IR N++AP KT ++E + +E + K A P +R+G P+E A A+L
Sbjct: 203 RDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFADAAAFLL 260
Query: 242 LPAASYITGQIISVDGG 258
YI G+++ +DG
Sbjct: 261 --TNGYINGEVMRLDGA 275
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 4e-47
Identities = 54/232 (23%), Positives = 89/232 (38%), Gaps = 21/232 (9%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL----NKCLKEWQSKGFVVS 69
L+G +VTG ++GIG+ LA +GA V +R++ L + CL+ + +
Sbjct: 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI- 83
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
E+ + + G G L++L+ N TN K M NF S
Sbjct: 84 --AGTMEDMTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 140
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD- 188
L P+LK S GSIV +SS+ G + Y A+K A++ ++ E++
Sbjct: 141 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSR 199
Query: 189 -NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
N+ T E K ++ + EE A +
Sbjct: 200 VNVSITLCVLGLIDT----------ETAMKAVSGIVHMQAAPKEECALEIIK 241
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 8e-47
Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 24/249 (9%)
Query: 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSG 70
R S+ G L+TG GIG+ T E A L + + N+ L + + + G V
Sbjct: 25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHT 84
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
V D ++ + ++V ++ G ++ILVNN G + K N +
Sbjct: 85 FVVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAH 143
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA---K 187
+ + P + + G IV ++S G V Y ++K A + L E A
Sbjct: 144 FWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 203
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLV--------AY 239
++T + P + T ++ T L EPEEV + +
Sbjct: 204 TGVKTTCLCPNFVNTGFIKN------------PSTSLGPTLEPEEVVNRLMHGILTEQKM 251
Query: 240 LCLPAASYI 248
+ +P++
Sbjct: 252 IFIPSSIAF 260
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 3e-46
Identities = 42/239 (17%), Positives = 84/239 (35%), Gaps = 40/239 (16%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
M L+ G + +G A E L V+ R+ ++ D
Sbjct: 3 AMKILLIGASGTLGSAVKERLEKKAEVITA-GRHSGDV-----------------TVDIT 44
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+ D +K+ ++VG K++ +V+ G+ P E + E+ + +++ +L L
Sbjct: 45 NIDSIKKMYEQVG-----KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLL 99
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
L G S + + + G+ A+ ++ A E + IR N+V+
Sbjct: 100 GIDSLNDKG--SFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVS 156
Query: 197 PWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255
P + S + + F + + P +V E + TG+ V
Sbjct: 157 PNVLEESWDKL----EPFFEGFLP-VPAAKVARAFEKS---------VFGAQTGESYQV 201
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 151 bits (385), Expect = 3e-45
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 27/259 (10%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK +VTG + G+G A LA GA V + E G V D
Sbjct: 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNAD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI----EYSAEEYSKIMTTNFEST 130
+ + +F G ++ LVN GT + + ++ + +++ + N T
Sbjct: 62 VTNEADATAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120
Query: 131 YHLCQLVYPLLKASGV------GSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRN 180
+++ +L ++ G IV +S+ G I Y A+K + LT
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF----DGQIGQAAYAASKGGVAALTLP 176
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLVAY 239
A E A+ IR ++AP T ++ + + + D + A P R+G EE A+LV +
Sbjct: 177 AARELARFGIRVVTIAPGIFDTPMMAGMPQ--DVQDALAASVPFPPRLGRAEEYAALVKH 234
Query: 240 LCLPAASYITGQIISVDGG 258
+C + + G++I +DG
Sbjct: 235 IC--ENTMLNGEVIRLDGA 251
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 3e-45
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 10/233 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
G A+VTGG GIG AT E A GA + ++ L + + + +GF G VC
Sbjct: 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC 87
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D D+ +L E G ++++ +N G + P + + +++ ++ + + H
Sbjct: 88 DVRHLDEMVRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHA 146
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ P L G G I F +S GL YG K + L LA E + I
Sbjct: 147 VEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGV 206
Query: 193 NSVAPWYTKTSLVERLLENK--------EFVDKVIARTPLQRVGEPEEVASLV 237
+ + P +T LV + ++VA L
Sbjct: 207 SVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLT 259
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 6e-45
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 29/262 (11%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
S+KG+ A++TGG G+G AT E L G GA K+ G +
Sbjct: 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPA 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY------SAEEYSKIMTTNF 127
D S + + KF G++++ VN G + T + E++ +++ N
Sbjct: 66 DVTSEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124
Query: 128 ESTYHLCQLVYPLLKASGV------GSIVFISSVGGLSHVGSGSI----YGATKAAMNQL 177
T+++ +LV + + G I+ +SV G + Y A+K + +
Sbjct: 125 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF----EGQVGQAAYSASKGGIVGM 180
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASL 236
T +A + A IR ++AP T L+ L E + + + ++ P R+G+P E A L
Sbjct: 181 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE--KVCNFLASQVPFPSRLGDPAEYAHL 238
Query: 237 VAYLCLPAASYITGQIISVDGG 258
V + ++ G++I +DG
Sbjct: 239 VQAII--ENPFLNGEVIRLDGA 258
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 6e-43
Identities = 58/233 (24%), Positives = 93/233 (39%), Gaps = 21/233 (9%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L+TG +RGIG+AT L G V +R+E L E + +
Sbjct: 2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLP----G 57
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + + + F G+L+ LVNN G + KP E + EE+ ++ TN +
Sbjct: 58 DVREEGDWARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLG 116
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P L G G+IV + S+ G + G+ Y A+K + L + + N+R
Sbjct: 117 IRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVV 176
Query: 194 SVAPWYTKTSLVERLLENKEFVDKVIAR-TPLQRVGEPEEVASLVAYLC-LPA 244
+V P T F + L+ PE+VA V + +P
Sbjct: 177 NVLPGSVDT----------GFAGNTPGQAWKLK----PEDVAQAVLFALEMPG 215
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 9e-42
Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 33/261 (12%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
++ A+VTGG G+G AT + L GA V ++ L G + D
Sbjct: 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRARFAAAD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI----EYSAEEYSKIMTTNFEST 130
+ + G L I+VN GT + +S + KI+ N +
Sbjct: 61 VTDEAAVASALDLAET--MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118
Query: 131 YHLCQLV-------YPLLKASGV-GSIVFISSVGGLSHVGSGSI----YGATKAAMNQLT 178
+++ +L P+ + G I+ +SV G I Y A+K + +T
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF----DGQIGQAAYSASKGGVVGMT 174
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLV 237
+A + A IR ++AP T L+ L E E + + P R+G P+E +L
Sbjct: 175 LPIARDLASHRIRVMTIAPGLFDTPLLASLPE--EARASLGKQVPHPSRLGNPDEYGALA 232
Query: 238 AYLCLPAASYITGQIISVDGG 258
++ + G++I +DG
Sbjct: 233 VHII--ENPMLNGEVIRLDGA 251
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 6e-41
Identities = 43/222 (19%), Positives = 70/222 (31%), Gaps = 28/222 (12%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M L+TG T G+G A L G + R L + +E ++ D A
Sbjct: 1 MRVLITGATGGLGGAFARALKG--HDLLLSGRRAGALAELAREVGARALP-----ADLAD 53
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
+ + L++E G L++LV+ VG R E + +++ + V
Sbjct: 54 ELEAKALLEEAG-----PLDLLVHAVGKAGRASVREAGRDLVEEMLAAH----LLTAAFV 104
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+ VF + V + Y A K A+ E ++ + V
Sbjct: 105 LKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRL 164
Query: 198 WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
T L P + PEE A V
Sbjct: 165 PAVATGLWAP------------LGGPPKGALSPEEAARKVLE 194
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 7e-41
Identities = 64/265 (24%), Positives = 102/265 (38%), Gaps = 31/265 (11%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVV----------HTCSRNEVELNKCLKEWQS 63
+ G +VTG GIG+A A GA V + + + E +
Sbjct: 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83
Query: 64 KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
G + A DQ LIQ F G L++LVNN G + S EE+ ++
Sbjct: 84 AGGEAVADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVI 142
Query: 124 TTNFESTYHLCQLVYPLLKASGV------GSIVFISSVGGLSHVGSGSI----YGATKAA 173
+ + + + + G I+ SS GL GS+ Y A KA
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ----GSVGQGNYSAAKAG 198
Query: 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEV 233
+ LT A E + + N++AP +T + E + + + + PE V
Sbjct: 199 IATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA-----EMMATQDQDFDAMAPENV 252
Query: 234 ASLVAYLCLPAASYITGQIISVDGG 258
+ LV +L A +TG++ V+GG
Sbjct: 253 SPLVVWLGSAEARDVTGKVFEVEGG 277
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 1e-40
Identities = 39/236 (16%), Positives = 81/236 (34%), Gaps = 19/236 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
++TG + G+G + G + R+E +L+ + D AS
Sbjct: 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYR---ARDLASH 59
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ E+L +++ + +V++ G+ E E+ ++ N S ++ + +
Sbjct: 60 QEVEQLFEQLD----SIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
K ++V I S S Y A K A+ L ++ E ++ +V P
Sbjct: 116 KRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPG 174
Query: 199 YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY-LCLPAASYITGQII 253
T EF + E+ A ++ L Y++ +
Sbjct: 175 GMAT----------EFWETSGKSLDTSSFMSAEDAALMIHGALANIGNGYVSDITV 220
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 139 bits (351), Expect = 1e-39
Identities = 56/244 (22%), Positives = 95/244 (38%), Gaps = 19/244 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGS 71
G TA VTGG G+G V +L G V + ++K L +++ G V G
Sbjct: 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D AS + + EV ++F G ++IL NN G N+ +P E S +++ ++ N
Sbjct: 65 QLDVASREGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV 123
Query: 132 HLCQLVYPLLKAS------GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
+ P + G +V +S+ GS IY TK A+ L+ +L
Sbjct: 124 NGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL 183
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVG----------EPEEVAS 235
K I + + P K+ + + + + V EP+ + +
Sbjct: 184 LKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGA 243
Query: 236 LVAY 239
V
Sbjct: 244 RVIE 247
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 2e-39
Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 37/255 (14%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+ALVTGG G+G+A L G V +G + D
Sbjct: 4 SALVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTRE 51
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI----EYSAEEYSKIMTTNFESTYHLC 134
+ + + + L +V+ G + + + + E + +++ N T+++
Sbjct: 52 EDVRRAVARAQEE--APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109
Query: 135 QLVYPLLKASGV------GSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACE 184
+L ++ + G IV +SV G I Y A+K + LT A E
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAF----EGQIGQAAYAASKGGVVALTLPAARE 165
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLVAYLCLP 243
A IR +VAP T L++ L E + + A+ P R+G PEE A+LV ++
Sbjct: 166 LAGWGIRVVTVAPGLFDTPLLQGLPE--KAKASLAAQVPFPPRLGRPEEYAALVLHIL-- 221
Query: 244 AASYITGQIISVDGG 258
+ G+++ +DG
Sbjct: 222 ENPMLNGEVVRLDGA 236
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 134 bits (341), Expect = 8e-39
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 14/227 (6%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVTG T G G+ G V R + L + E ++ D +
Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIA---QLDVRN 57
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
E+++ + +++ ++ILVNN G + +P + S E++ ++ TN + ++ +
Sbjct: 58 RAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRA 116
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
V P + G I+ I S G G++YGATKA + Q + NL + +R +
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176
Query: 197 P---WYTKTSLVERLLENKEFVDKVIA-RTPLQRVGEPEEVASLVAY 239
P T+ S V R + +K L PE+V+ V +
Sbjct: 177 PGLVGGTEFSNV-RFKGDDGKAEKTYQNTVALT----PEDVSEAVWW 218
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 134 bits (341), Expect = 9e-39
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 10/235 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L+G AL+TG + GIG+AT LA GA V +R +L E + G V
Sbjct: 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A + + G L+ILVNN G + P + ++++++ TN ++
Sbjct: 64 DVADRQGVDAAVASTVEAL-GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYM 122
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P L G++V +SS+ G +V + ++Y ATK +N + L E + +R
Sbjct: 123 TRAALPHLLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVV 181
Query: 194 SVAPWYTKTSLVE--RLLENKEFVDKVIAR-TPLQRVGEPEEVASLVAY-LCLPA 244
+ P T T L KE ++ I++ LQ +++A V Y + P
Sbjct: 182 VIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQ----AQDIAEAVRYAVTAPH 232
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 134 bits (341), Expect = 1e-38
Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 9/232 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+ L+TG + GIG+ EL GA + +R + + E + G V D
Sbjct: 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
Q + G++++LVNN G P +E+ +++ N +
Sbjct: 62 VTDRHSVAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
V P+++A G I+ I S+G LS V + ++Y ATK A+ ++ L E NIR
Sbjct: 121 GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTC 178
Query: 195 VAPWYTKTSLVE-RLLENKEFVDKVIARTPLQRVGEPEEVASLVAY-LCLPA 244
V P ++ L E LQ P ++A V + P
Sbjct: 179 VNPGVVESELAGTITHEETMAAMDTYRAIALQ----PADIARAVRQVIEAPQ 226
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-38
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 16/230 (6%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-WQSKGFVVSGSVCDA 75
A++TG +RGIG+A LA G + +R+ L K E Q +G V D
Sbjct: 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+ + E+ ++V +F G ++++V N G K E S EE+ +++ N + +
Sbjct: 62 SKAESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLK 120
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
LK +G ++V S V G Y +TK A L R E ++R +
Sbjct: 121 AFLDSLKRTGGLALVTTSDVSARLIPY-GGGYVSTKWAARALVRTFQIE--NPDVRFFEL 177
Query: 196 APWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY-LCLPA 244
P T F + + +P+E+A V L LP
Sbjct: 178 RPGAVDT----------YFGGSKPGKPKEKGYLKPDEIAEAVRCLLKLPK 217
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 2e-37
Identities = 54/249 (21%), Positives = 91/249 (36%), Gaps = 17/249 (6%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA+ + R ++TG + GIG+A + G + +R L L
Sbjct: 1 MASMTGGQQMGR-GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA-LNL 58
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
D + I + G + +VNN G + A E+
Sbjct: 59 --PNTLCA---QVDVTDKYTFDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQ 112
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
++ N + Q V +KA G+I+ ISS+ G + Y TK A++ ++ N
Sbjct: 113 RMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISEN 172
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVE--RLLENKEFVDKVIA--RTPLQRVGEPEEVASL 236
+ E A N+R ++AP KT L+ + K+ D L ++VA
Sbjct: 173 VREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLA----ADDVARA 228
Query: 237 VAY-LCLPA 244
V + P
Sbjct: 229 VLFAYQQPQ 237
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 6e-37
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 32/263 (12%)
Query: 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKCLKEW 61
S K ++TG G+G+ E A LGA V + N + + E
Sbjct: 2 SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI 61
Query: 62 QSKG---FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE 118
G +V D +K+++ F G +++++NN G + + ++
Sbjct: 62 VKNGGVAVADYNNVLDG------DKIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKD 114
Query: 119 YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178
Y ++ + + + + +P + G IV SS GL + Y + K+A+
Sbjct: 115 YKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFA 174
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVA 238
LA E AK NI+ N++AP ++ + E ++ PE+VA LV
Sbjct: 175 ETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPPML-----------EKLGPEKVAPLVL 222
Query: 239 YLCLPAASYITGQIISVDGGFTA 261
YL +TGQ V GF A
Sbjct: 223 YLSSAEN-ELTGQFFEVAAGFYA 244
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-33
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 30/250 (12%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV-ELNKCLKEWQSKG---FVV 68
LK L+TG G+G+ + A GA VV N+ + K + E ++ G +
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVV-----NDFKDATKTVDEIKAAGGEAWPD 374
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
V + E +I+ V K+ G ++ILVNN G + + S +E+ + +
Sbjct: 375 QHDVAKDS-----EAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLI 428
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
T++L +L +P G I+ I+S G+ + Y ++KA + L++ +A E AK+
Sbjct: 429 GTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKN 488
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
NI+ N VAP + +T++ ++ ++ + ++VA L+ YL +
Sbjct: 489 NIKVNIVAP-HAETAMTLSIMREQDK-----------NLYHADQVAPLLVYLGTDDV-PV 535
Query: 249 TGQIISVDGG 258
TG+ + GG
Sbjct: 536 TGETFEIGGG 545
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 7e-37
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 28/262 (10%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKCLKE 60
+S G LVTG G+G+A A GA+V + +K ++E
Sbjct: 2 ASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 61
Query: 61 WQSKGFVVSGS-VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+ +G G V + S + EKL++ F G+++++VNN G + S E++
Sbjct: 62 IRRRG----GKAVANYDSVEAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDW 116
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
I + ++ + + + +K G I+ +S G+ + Y A K + L
Sbjct: 117 DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLAN 176
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
L E K+NI N++AP + + E ++ ++ V+ + +PE VA LV +
Sbjct: 177 TLVIEGRKNNIHCNTIAPN-AGSRMTETVMP-EDLVEAL----------KPEYVAPLVLW 224
Query: 240 LCLPAASYITGQIISVDGGFTA 261
LC + G + V G+
Sbjct: 225 LCHESC-EENGGLFEVGAGWIG 245
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-36
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 13/245 (5%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG 65
SS R S T +TG T G G+A A G + R E L L S
Sbjct: 10 SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQA-LAGELSAK 68
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMT 124
V D + + +F L L+NN G + P +++ ++
Sbjct: 69 TRVLPLTLDVRDRAAMSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTMVD 127
Query: 125 TNFESTYHLCQLVYPLLKASGVGS-IVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
TN + + +L+ P L A G G+ IV + SV G +YG TKA + Q + NL C
Sbjct: 128 TNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRC 187
Query: 184 EWAKDNIRTNSVAPWYTKT--SLVERLLENKEFVDKVIAR-TPLQRVGEPEEVASLVAY- 239
+ +R ++ P ++ SLV R ++ DK A P+Q PE++A + +
Sbjct: 188 DLQGTGVRVTNLEPGLCESEFSLV-RFGGDQARYDKTYAGAHPIQ----PEDIAETIFWI 242
Query: 240 LCLPA 244
+ PA
Sbjct: 243 MNQPA 247
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 3e-36
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 15/243 (6%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHT---CSRNEVELNKCLKEWQ 62
S + + L T L+TG + GIG+AT E +R +L + K
Sbjct: 22 SQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTID 81
Query: 63 SK--GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEY 119
+ V + D ++ + I+ + +F ++ILVNN G + + + E+
Sbjct: 82 QEFPNAKVHVAQLDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDI 140
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
+ TN + ++ Q V P+ +A G IV + S+ G +GSIY A+K A+ T
Sbjct: 141 QDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTD 200
Query: 180 NLACEWAKDNIRTNSVAPWYTKT--SLVERLLENKEFVDKVIAR-TPLQRVGEPEEVASL 236
+L E IR +AP +T SLV R N+E V TPL ++VA L
Sbjct: 201 SLRKELINTKIRVILIAPGLVETEFSLV-RYRGNEEQAKNVYKDTTPLM----ADDVADL 255
Query: 237 VAY 239
+ Y
Sbjct: 256 IVY 258
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 4e-36
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 19 TALVTGGTRGIGQATVEELAGL---GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ L+TG RG+G V+ L L + T RN + + L++ + D
Sbjct: 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 81
Query: 76 ASPDQREKLIQEVGSKF-NGKLNILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYHL 133
+ D +KL+ ++ + LN+L NN G + I ++E + TN L
Sbjct: 82 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141
Query: 134 CQLVYPLLKAS-----------GVGSIVFISSVGG---LSHVGSGSIYGATKAAMNQLTR 179
+ PLLK + G +I+ +SS+ G + G Y +K+A+N T+
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 201
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSL 204
+L+ + I S+ P + KT +
Sbjct: 202 SLSVDLYPQRIMCVSLHPGWVKTDM 226
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 5e-36
Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 18/250 (7%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG 65
+ RW + ALVTG + GIG A L G V C+R + + E +S G
Sbjct: 23 ARPGMERW--RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG 80
Query: 66 F--VVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
+ + CD ++ + + + S+ ++I +NN G + S + +
Sbjct: 81 YPGTLIPYRCDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMF 139
Query: 124 TTNFESTYHLCQLVYPLLKASGVGS--IVFISSVGGLSHV--GSGSIYGATKAAMNQLTR 179
N + + Y +K V I+ I+S+ G + Y ATK A+ LT
Sbjct: 140 NVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTE 199
Query: 180 NLACEW--AKDNIRTNSVAPWYTKTSLVE-RLLENKEFVDKVIAR-TPLQRVGEPEEVAS 235
L E A+ +IR ++P +T ++ E + L+ PE+VA
Sbjct: 200 GLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLK----PEDVAE 255
Query: 236 LVAY-LCLPA 244
V Y L PA
Sbjct: 256 AVIYVLSTPA 265
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-34
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 25/206 (12%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAV--VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
+ +VTG RGIG V++L + + +R+ + + S+ V+
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLP---LTVT 61
Query: 77 SPDQREKLIQEVGSKFNG-KLNILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYHLC 134
+ + +VG L++L+NN G + T E + ++ + N S L
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 135 QLVYPLLKASGV-----------GSIVFISS-VGGLSHVGSGS------IYGATKAAMNQ 176
Q + PLLK + +++ ISS +G ++ SGS Y +KAA+N
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKT 202
R LA + DN+ + P + +T
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQT 207
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 5e-33
Identities = 61/280 (21%), Positives = 107/280 (38%), Gaps = 35/280 (12%)
Query: 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKC 57
S + G A+VTG G+G+ A GA V ++ +
Sbjct: 9 SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIV 68
Query: 58 LKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY 114
+ E + G SV D K+I+ F G+++ILVNN G + ++
Sbjct: 69 VDEIRKAGGEAVADYNSVIDG------AKVIETAIKAF-GRVDILVNNAGILRDRSLVKT 121
Query: 115 SAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174
S ++++ + + + ++ Q +P +K G I+ SS G+ Y A K +
Sbjct: 122 SEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGL 181
Query: 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVA 234
L +A E A++N+ N + P + + E +L + F +P+ +A
Sbjct: 182 IGLANTVAIEGARNNVLCNVIVPT-AASRMTEGILPDILF-----------NELKPKLIA 229
Query: 235 SLVAYLCLPAASYITGQIISVDGGFTANGF---NPGIRLD 271
+VAYLC + G I G+ G L
Sbjct: 230 PVVAYLCHESCE-DNGSYIESAAGWATKLHMVRGKGAVLR 268
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-30
Identities = 54/237 (22%), Positives = 87/237 (36%), Gaps = 49/237 (20%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
S ALVTGG +GIG A V +L L V +R+ +++ Q++G
Sbjct: 1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D L + ++ G L++LVNN G + + M TNF T
Sbjct: 61 LDIDDLQSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD 119
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS--------------------------- 165
+C + PL+K G +V +SS+ + + S S
Sbjct: 120 VCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 177
Query: 166 --------------IYGATKAAMNQLTRNLACEWAK----DNIRTNSVAPWYTKTSL 204
YG TK + L+R A + ++ D I N+ P + +T +
Sbjct: 178 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 4e-30
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
LVTG + G G+A E G V +R L+ + + + +S D
Sbjct: 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAIS---LDVTDG 63
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
++ + + +V +++ G++++LVNN G E + E + + L + +
Sbjct: 64 ERIDVVAADVLARY-GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P ++ G GS+V ISS GG S Y ATKAA+ QL+ LA E A I+ V P
Sbjct: 123 PQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPG 182
Query: 199 YTKTSLVER 207
+T+L +
Sbjct: 183 AFRTNLFGK 191
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 4e-29
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-----WQSKGFVVSGSVC 73
L+TG + G G+ T E LAG G V+ R+ V N E + +
Sbjct: 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D S ++ I ++ + G++++L++N G + P ++ E+++++ N ST +
Sbjct: 67 DVQSQVSVDRAIDQIIGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRV 125
Query: 134 CQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ P ++ G +++ISS + Y A KAAM+ + A E ++ I T
Sbjct: 126 NRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIET 185
Query: 193 NSVAPWYTKTSLVER 207
+ + P +
Sbjct: 186 SIIVPGAFTSGTNHF 200
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-27
Identities = 59/313 (18%), Positives = 97/313 (30%), Gaps = 95/313 (30%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSV 72
K A+VTGG +GIG ++L+ G +V R+ + ++ +++ ++ V
Sbjct: 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68
Query: 73 CDAASPDQ-REKLIQEVGSKFNGKLNILVNNVG--------------------------- 104
D P L + + F GKL+ILVNN G
Sbjct: 69 LDVTDPIATMSSLADFIKTHF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVK 127
Query: 105 ---TNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV 161
+ + + E + + N+ + +++ PLL+ S IV +SS G
Sbjct: 128 IYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKY 187
Query: 162 GSGSI-------------------------------------------YGATKAAMNQLT 178
S Y +KA +N T
Sbjct: 188 VSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVA 238
R LA + + N V P KT + N + EE A V
Sbjct: 248 RVLANKI--PKFQVNCVCPGLVKTEM------NYGIGNY-----------TAEEGAEHVV 288
Query: 239 YLCLPAASYITGQ 251
+ L +G
Sbjct: 289 RIALFPDDGPSGF 301
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-25
Identities = 50/241 (20%), Positives = 85/241 (35%), Gaps = 26/241 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA----VVHTCSRNE---VELNKCLKEWQSKGFVVSGS 71
L+TG + GIG LA + V T R+ L + + +
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATL-RDLKTQGRLWEAARALACPPGSLETL 62
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + V G++++LV N G + P + + ++ N T
Sbjct: 63 QLDVRDSKSVAAARERV---TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ Q P +K G G ++ SVGGL + +Y A+K A+ L +LA +
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVH 179
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRV---------------GEPEEVASL 236
+ + T+ +E++L + E V R PEEVA +
Sbjct: 180 LSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV 239
Query: 237 V 237
Sbjct: 240 F 240
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 3e-20
Identities = 61/259 (23%), Positives = 101/259 (38%), Gaps = 18/259 (6%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L G ALV G R I E A + A+ + R E K +
Sbjct: 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEV-ALSYQAERLRPEAEKLAEALGGALLFR 64
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
D ++ + L V F G L+ LV+ + + I+ +++ +
Sbjct: 65 ----ADVTQDEELDALFAGVKEAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALE 119
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
+ S + + PLL+ G IV ++ V ++ KAA+ R LA E
Sbjct: 120 VSAYSLVAVARRAEPLLREGG--GIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYE 177
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
+R N+++ +T + + D+V PL+R EEV +L +L P
Sbjct: 178 LGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237
Query: 245 ASYITGQIISVDGGFTANG 263
AS ITG+++ VD G+ G
Sbjct: 238 ASGITGEVVYVDAGYHIMG 256
|
| >4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 7e-20
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 16/255 (6%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L+ T ++ G R G+ + + A L + R+ EL K L++ +
Sbjct: 30 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKL-VFTYRKERSRKELEKLLEQLNQPEAHL 88
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
D S ++ +++G G ++ + +++ ++R E S E +
Sbjct: 89 YQ--IDVQSDEEVINGFEQIGKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQD 145
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
+ S + L+ G SIV + +GG V + ++ G KA++ + LA +
Sbjct: 146 ISSYSLTIVAHEAKKLMPEGG--SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALD 203
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
DNIR N+++ +T + + + ++ R PL+R + EV AYL
Sbjct: 204 LGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDL 263
Query: 245 ASYITGQIISVDGGF 259
+S +TG+ I VD GF
Sbjct: 264 SSGVTGENIHVDSGF 278
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 8e-20
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 23/262 (8%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L+G AL+TG R GI ++ E A L A + + E + + K + S VV
Sbjct: 19 LEGKRALITGVANERSIAYGIAKSFHREGAQL-AFTYATPKLEKRVREIAKGFGSD-LVV 76
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
CD + + + L + + + G L+I+V+++ + I+ S E + M
Sbjct: 77 K---CDVSLDEDIKNLKKFLEENW-GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMD 132
Query: 125 TNFESTY---HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
S Y L + + PL++ G+IV +S G V ++ G KAA+ R L
Sbjct: 133 I---SVYSLIALTRELLPLMEGRN-GAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYL 188
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
A + AK R N+++ KT + ++ P + E+V +LC
Sbjct: 189 AYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLC 248
Query: 242 LPAASYITGQIISVDGGFTANG 263
A ITG+++ VD G+ G
Sbjct: 249 SDWARAITGEVVHVDNGYHIMG 270
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 2e-19
Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 21/261 (8%)
Query: 15 LKGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVE--LNKCLKEWQSKGFVVSG 70
L G L+TG + I + + GA + + + + K E+ V+
Sbjct: 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPA-AVLP- 81
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEY-SAEEYSKIMTT 125
CD S + + L E+G + L+ +V+++ + I+ + E +S
Sbjct: 82 --CDVISDQEIKDLFVELGKVW-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDI 138
Query: 126 NFESTY---HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
S Y L + ++K S+V ++ +G + S + G KA++ R A
Sbjct: 139 ---SAYSFAALAKEGRSMMKNRN-ASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTA 194
Query: 183 CEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
+D I+ N+V+ KT + K+ +D +PL++ + EV + VA+LC
Sbjct: 195 LALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCS 254
Query: 243 PAASYITGQIISVDGGFTANG 263
A+ ITG+++ VD G+
Sbjct: 255 DMATGITGEVVHVDAGYHCVS 275
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 6e-19
Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 24/265 (9%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
LKG L+ G + GI Q+ + A L A + E + +E S +V
Sbjct: 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATL-AFTYLNESLEKRVRPIAQELNSP-YVY 61
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
D + + + L V G L+ +V++V + +E S ++ M
Sbjct: 62 E---LDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAME 117
Query: 125 TNFESTY---HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
S Y L + PLL S++ +S +G ++ ++ G KAA+ R L
Sbjct: 118 I---SVYSLIELTNTLKPLLNNGA--SVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYL 172
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
A + K +IR N+++ +T + + + + PL++ EEV + YL
Sbjct: 173 AVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL 232
Query: 242 LPAASYITGQIISVDGGFTANGFNP 266
+S ++G++ VD G+ G
Sbjct: 233 SSLSSGVSGEVHFVDAGYHVMGMGA 257
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 6e-19
Identities = 53/262 (20%), Positives = 108/262 (41%), Gaps = 16/262 (6%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L+G +V G R GI ++ E A L + R E +++ ++
Sbjct: 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARL-IFTYAGERLEKSVHELAGTLDRNDSII 63
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
CD + + E + + G ++ + + + + + + + +
Sbjct: 64 LP--CDVTNDAEIETCFASIKEQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHN 120
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
+ S + + P++ G SIV ++ +GG + + ++ G KA+++ + LA +
Sbjct: 121 ISSYSLTAVVKAARPMMTEGG--SIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAAD 178
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
K+NIR NS++ +T + + + + + R PL+R PEEV A+L
Sbjct: 179 LGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDM 238
Query: 245 ASYITGQIISVDGGFTANGFNP 266
+ ITG+ + VD GF
Sbjct: 239 SRGITGENLHVDSGFHITARLE 260
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 1e-18
Identities = 55/259 (21%), Positives = 104/259 (40%), Gaps = 18/259 (6%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L+G L+ G R GI +A E A L A + + + +E +
Sbjct: 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAEL-AFTYQGDALKKRVEPLAEELGAF-VAG 86
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
CD A + + + + K+ GKL+ LV+ +G + I+ S ++ M
Sbjct: 87 H---CDVADAASIDAVFETLEKKW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTML 142
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
+ S + + L+ G SI+ ++ G + + ++ G KAA+ + LA +
Sbjct: 143 ISVYSLTAVSRRAEKLMADGG--SILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVD 200
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
NIR N+++ KT + + + + PL+R +EV + Y
Sbjct: 201 LGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDL 260
Query: 245 ASYITGQIISVDGGFTANG 263
+ +TG++ D G+ G
Sbjct: 261 SRSVTGEVHHADSGYHVIG 279
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 1e-18
Identities = 49/259 (18%), Positives = 104/259 (40%), Gaps = 18/259 (6%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
++G ++ G + GI +A + A + A+ + + ++ + K V
Sbjct: 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEV-ALTYLSETFKKRVDPLAESLGVK-LTV 85
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
CD + + + + + + ++ G L+ +V+ V ++ ++ S + M
Sbjct: 86 P---CDVSDAESVDNMFKVLAEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMH 141
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
+ S ++ PL+ G SI+ +S G V ++ G KAA+ + LA +
Sbjct: 142 ISCYSFTYIASKAEPLMTNGG--SILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAVD 199
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
K IR N+++ +T + + + +PL+R ++V YL
Sbjct: 200 LGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDL 259
Query: 245 ASYITGQIISVDGGFTANG 263
TG+ + VD G+ G
Sbjct: 260 GRGTTGETVHVDCGYHVVG 278
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 2e-18
Identities = 52/260 (20%), Positives = 110/260 (42%), Gaps = 19/260 (7%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L G LVTG GI QA E A L A + + + + + + S +
Sbjct: 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAEL-AFTYQNDKLKGRVEEFAAQLGSDIVLQ 65
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIE-YSAEEYSKIM 123
CD A + + E+G + K + V+++G + + + E +
Sbjct: 66 ----CDVAEDASIDTMFAELGKVW-PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAH 120
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
+ S + + +L +++ +S +G + + ++ G KA++ R +A
Sbjct: 121 DISSYSFVAMAKACRSMLNPGS--ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMAN 178
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
+ +R N+++ +T + + ++ + A TP++R E+V + A+LC
Sbjct: 179 AMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSD 238
Query: 244 AASYITGQIISVDGGFTANG 263
++ I+G+++ VDGGF+
Sbjct: 239 LSAGISGEVVHVDGGFSIAA 258
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 8e-18
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 19/256 (7%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L G L+TG R GI +A E A L A + R + + + E+ S+ V
Sbjct: 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAEL-AFTYVGDRFKDRITEFAAEFGSE-LVF 69
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEY-SAEEYSKIM 123
CD A Q + L + + + L+ LV+++G I ++ + E +
Sbjct: 70 P---CDVADDAQIDALFASLKTHW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAH 125
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
+ S L + P+L S++ +S +G + + + G KAA+ R LA
Sbjct: 126 DISAYSFPALAKAALPMLSDDA--SLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAV 183
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243
+R N+++ KT + + +D V + +PL+R E+V + A+L
Sbjct: 184 SLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSD 243
Query: 244 AASYITGQIISVDGGF 259
AS +T +++ VD GF
Sbjct: 244 LASGVTAEVMHVDSGF 259
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 8e-17
Identities = 57/277 (20%), Positives = 93/277 (33%), Gaps = 49/277 (17%)
Query: 15 LKGMTALVTG--GTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
L G LV+G I GA +V T + + +K ++
Sbjct: 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLE-- 62
Query: 72 VCDAASPDQREKLIQEVGSKF--NGKLNILV--------NNVGTNIRKPTIEYSAEEYSK 121
D + + L V KL+ +V +G N P + + SK
Sbjct: 63 -LDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGIN---PFFDAPYADVSK 118
Query: 122 IMTTNFESTY---HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--Y---GATKAA 173
+ S Y + + + P++ G SIV G+ S ++ Y K+A
Sbjct: 119 GIHI---SAYSYASMAKALLPIMNPGG--SIV------GMDFDPSRAMPAYNWMTVAKSA 167
Query: 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKT----------SLVERLLENKEFVDKVIARTP 223
+ + R +A E K +R+N VA +T E + + + R P
Sbjct: 168 LESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP 227
Query: 224 LQR-VGEPEEVASLVAYLCLPAASYITGQIISVDGGF 259
+ + + VA V L TG II DGG
Sbjct: 228 IGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319 | Back alignment and structure |
|---|
Score = 76.0 bits (187), Expect = 3e-16
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 73 CDAASPDQR--------EKLIQEVGSKFNGKLNILVNNVG--TNIRKPTIEYSAEEYSKI 122
+ +S + ++ + V + G+++ILV+++ + KP ++ S + Y
Sbjct: 104 PEVSSNKRYAGVGGFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYLAA 162
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGSIYGATKAAMNQLTRNL 181
++++ S L Q PL+K G S + +S + + G G + KAA+ R L
Sbjct: 163 VSSSSYSFVSLLQHFLPLMKEGG--SALALSYIASEKVIPGYGGGMSSAKAALESDCRTL 220
Query: 182 ACEW-AKDNIRTNSVAPWYTKT---SLVERLLENKEF---VDKVIARTPLQRVGEPEEVA 234
A E +R N ++ K+ S + + + +D A PLQ+ E ++V
Sbjct: 221 AFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVG 280
Query: 235 SLVAYLCLPAASYITGQIISVDGGFTANG 263
+L P A +TG + VD G A G
Sbjct: 281 RAALFLLSPLARAVTGATLYVDNGLHAMG 309
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315 | Back alignment and structure |
|---|
Score = 76.0 bits (187), Expect = 4e-16
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 21/209 (10%)
Query: 73 CDAASPDQR--------EKLIQEVGSKFNGKLNILVNNVG--TNIRKPTIEYSAEEYSKI 122
D + +++ +V G ++ILV+++ + KP +E S + Y
Sbjct: 91 QDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAA 149
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGSIYGATKAAMNQLTRNL 181
+ + S L Q P++ G S V +S + V G G + KAA+ TR L
Sbjct: 150 SSNSAYSFVSLLQHFGPIMNEGG--SAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTL 207
Query: 182 ACEW-AKDNIRTNSVAPWYTKT------SLVERLLENKEFVDKVIARTPLQRVGEPEEVA 234
A E K +R N+++ K+ +D PL+R ++V
Sbjct: 208 AWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVG 267
Query: 235 SLVAYLCLPAASYITGQIISVDGGFTANG 263
+L P A ++G + VD G A G
Sbjct: 268 GAALFLLSPLARAVSGVTLYVDNGLHAMG 296
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 5e-16
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 7/201 (3%)
Query: 67 VVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG--TNIRKPTIEYSAEEYSKIMT 124
V + +S ++ + V F G ++ILV+++ + KP +E S + Y ++
Sbjct: 92 VKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAIS 150
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGSIYGATKAAMNQLTRNLAC 183
+ S L P++ G + + ++ + + G G + KAA+ TR LA
Sbjct: 151 ASSYSFVSLLSHFLPIMNPGG--ASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAF 208
Query: 184 EW-AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
E K NIR N+++ + + + ++ P+Q+ +EV + A+L
Sbjct: 209 EAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVS 268
Query: 243 PAASYITGQIISVDGGFTANG 263
P AS ITG I VD G + G
Sbjct: 269 PLASAITGATIYVDNGLNSMG 289
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 65.7 bits (160), Expect = 1e-12
Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 21/175 (12%)
Query: 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
K++ S+KG A+V GT +G + LAG GA V C R + + F V
Sbjct: 111 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKV 169
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
+ + + A R + ++ + + + + +
Sbjct: 170 NVTAAETADDASRAEAVKGA--------HFVFTAGAIGLE----LLPQAAWQNESSIEIV 217
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS---GSI-YGATKAAMNQLTR 179
+ Y+ P L G+ + GG G+ G + +A + +L
Sbjct: 218 ADYNAQ----PPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFE 268
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 3e-11
Identities = 44/254 (17%), Positives = 83/254 (32%), Gaps = 68/254 (26%)
Query: 67 VVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG--TNIRKPTIEYSAEEYSKIMT 124
+ + E + + K+ GK+N+LV+++ ++K + S + Y ++
Sbjct: 86 TKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALS 144
Query: 125 TNFESTY---HLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-------GSIYGATKAAM 174
S+Y LC+ ++K S+ L++ S G + KAA+
Sbjct: 145 K---SSYSLISLCKYFVNIMKPQS--------SIISLTYHASQKVVPGYGGGMSSAKAAL 193
Query: 175 NQLTRNLACEW-AKDNIRTNSVAP------------------------------------ 197
TR LA NIR N+++
Sbjct: 194 ESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNI 253
Query: 198 -------WYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
K S + ++ PL++ ++ S+ ++L + ITG
Sbjct: 254 MNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITG 313
Query: 251 QIISVDGGFTANGF 264
Q I VD G
Sbjct: 314 QTIYVDNGLNIMFL 327
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-11
Identities = 49/281 (17%), Positives = 87/281 (30%), Gaps = 55/281 (19%)
Query: 11 SRWS------LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQS 63
+ W+ T ++TG G+G T ELA GA V+ R+ + +
Sbjct: 4 TGWTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAV-RDTRKGEAAARTMAG 62
Query: 64 KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
+ V D ++ + ++L+NN G I + + + +
Sbjct: 63 Q---VEVRELDLQDLSS----VRRFADGVS-GADVLINNAG--IMAVPYALTVDGFESQI 112
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI----------------- 166
TN + L L+ P L +V +SS+ H G I
Sbjct: 113 GTNHLGHFALTNLLLPRLTD----RVVTVSSMA---HW-PGRINLEDLNWRSRRYSPWLA 164
Query: 167 YGATKAAM----NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-KEFVDKVIAR 221
Y +K A ++L R L A +R + P Y+ T+L + + R
Sbjct: 165 YSQSKLANLLFTSELQRRL--TAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATR 222
Query: 222 TPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262
+ + A Y + G+
Sbjct: 223 VVAT---DADFGARQTLYAASQDLP--GDSFVGPRFGYLGR 258
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422 | Back alignment and structure |
|---|
Score = 59.8 bits (144), Expect = 2e-10
Identities = 42/291 (14%), Positives = 80/291 (27%), Gaps = 54/291 (18%)
Query: 19 TALVTGGTRGIGQATVEELA-GLGAVVHTCSRNEVELNKCL------------KEWQSKG 65
LV G + G G A+ A G GA + K ++ G
Sbjct: 63 KVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG 122
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGT-------------------- 105
DA S R ++I+ + ++ G+++++V ++ +
Sbjct: 123 LYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIG 182
Query: 106 --------NIRKPTIE-------YSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIV 150
+ K TI + E I + + + V
Sbjct: 183 QTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSV 242
Query: 151 FISSVGG---LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207
S +G G++ G K +++ + L AK N T
Sbjct: 243 AFSYIGTEITWPIYWHGAL-GKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAA 301
Query: 208 LLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258
+ ++ + ++ G E + L GQ VD
Sbjct: 302 IPVMPLYIS--MVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQ 350
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-07
Identities = 22/163 (13%), Positives = 50/163 (30%), Gaps = 34/163 (20%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV--VHTCSRNEVELNKCLKEWQSKGFVVSGS 71
L+ G T G+ ++ + + V +R + + +
Sbjct: 2 HSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP----------RLDNP 51
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
V + E+ + +G ++ +GT I++ S E + + +
Sbjct: 52 VGP----------LAELLPQLDGSIDTAFCCLGTTIKEAG---SEEAFRAV-------DF 91
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174
L V G + +S++G + S Y K +
Sbjct: 92 DLPLAVGKRALEMGARHYLVVSALG--ADAKSSIFYNRVKGEL 132
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 7e-07
Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 32/178 (17%)
Query: 1 MANAESSFKSSR-WSLKGMTALVTGGTRG-IGQATVEELAGLGAV--VHTCSRNEVELNK 56
MA E+ K + ++ + + G + G G+ ++E+ G V R ++ ++
Sbjct: 1 MAETEALSKLREDFRMQNKSVFILGAS-GETGRVLLKEILEQGLFSKVTLIGRRKLTFDE 59
Query: 57 CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA 116
V+ V D D Q ++ +GT K A
Sbjct: 60 ------EAYKNVNQEVVDFEKLDDYASAFQGH--------DVGFCCLGTTRGKA----GA 101
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174
E + ++ L KA G +SS G + S +Y K +
Sbjct: 102 EGFVRV-------DRDYVLKSAELAKAGGCKHFNLLSSKG--ADKSSNFLYLQVKGEV 150
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 2e-04
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV---ELNKCLKEWQSKGFVVSGSVC 73
+ ++TGG G G + L GA +V T SR+ + + ++EW+ +G V S
Sbjct: 1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLT-SRSGIRTGYQARQVREWRRQGVQVLVSTS 1944
Query: 74 DAASPDQREKLIQEV 88
+A+S D LI E
Sbjct: 1945 NASSLDGARSLITEA 1959
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK 64
S +GM LV G + + + EL G RNE + + L+E
Sbjct: 9 HHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LRERG-A 66
Query: 65 GFVVSGSVCDAASP 78
+V ++ + S
Sbjct: 67 SDIVVANLEEDFSH 80
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 6e-04
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 19 TALVTGGTRGIGQATVEELAG-LGA---VVHTCSRNEV---ELNKCLKEWQSKGFVVSGS 71
T LVTGGT +G L G V+ SR + + + + G VS
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVL--VSRRGPAASGAAELVAQLTAYGAEVSLQ 589
Query: 72 VCDAASPDQREKLIQEV 88
CD A + K++ +
Sbjct: 590 ACDVADRETLAKVLASI 606
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 39.3 bits (92), Expect = 7e-04
Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 41/171 (23%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
LVTG +G+ E LA + ++ + L V + DA +
Sbjct: 7 LVTGAAGQLGRVMRERLAPMAEILR------LADLSPLDPAGPNEECVQCDLADA---NA 57
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
++ + +V+ G ++ KP + +I+ N Y+L +
Sbjct: 58 VNAMVAGC--------DGIVHLGGISVEKP--------FEQILQGNIIGLYNLYEAA--- 98
Query: 141 LKASGVGSIVFISS---VGGLSHVGS---------GSIYGATKAAMNQLTR 179
+A G IVF SS +G +YG +K L R
Sbjct: 99 -RAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLAR 148
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 272 | |||
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 100.0 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 100.0 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.97 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.97 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.96 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.96 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.96 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.95 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.95 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.94 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.94 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.94 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.94 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.94 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.94 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.94 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.93 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.93 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.93 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.93 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.93 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.93 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.93 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.92 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.92 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.92 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.92 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.92 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.92 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.92 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.92 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.92 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.92 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.91 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.91 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.91 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.91 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.91 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.91 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.91 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.91 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.91 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.91 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.91 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.91 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.9 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.9 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.9 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.9 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.9 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.89 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.89 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.89 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.89 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.89 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.89 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.89 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.88 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.88 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.88 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.88 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.88 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.88 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.88 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.88 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.87 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.86 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.86 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.86 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.86 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.86 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.85 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.85 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.85 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.85 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.85 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.85 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.84 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.83 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.83 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.82 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.82 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.82 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.81 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.8 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.77 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.77 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.75 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.75 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.74 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.73 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.72 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.72 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.71 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.68 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.67 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.65 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.56 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.33 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.32 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.07 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.97 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.92 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.79 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.72 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.72 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.68 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.62 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.61 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.58 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.57 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.55 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.54 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.51 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.45 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 98.38 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.36 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.36 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.34 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.32 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.31 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.31 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.31 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.31 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.3 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.29 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.29 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.28 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.27 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.23 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.18 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.14 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.13 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.11 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.08 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.07 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 98.07 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 98.07 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 98.05 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 98.03 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 98.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 98.0 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.97 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.97 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.97 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.96 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.95 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.95 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.94 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.91 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.9 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.88 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.82 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.8 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.75 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.74 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.71 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.71 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.71 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.7 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.68 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.65 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.65 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.65 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.64 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.63 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.62 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.54 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.53 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.53 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.52 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.48 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.47 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.45 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.39 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.38 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.38 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.33 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.32 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.32 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.32 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.31 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.28 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.27 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 97.27 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.26 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.24 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 97.23 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 97.22 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 97.17 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.12 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 97.1 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.09 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 97.09 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.08 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 97.08 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 97.07 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.05 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.04 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.04 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.04 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.03 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 97.03 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 97.02 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.01 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.99 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.97 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.97 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.97 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 96.96 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.93 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.93 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.92 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.91 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.89 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.89 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.89 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.88 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.88 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 96.86 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.84 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.83 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.83 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.8 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.79 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.79 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 96.78 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.76 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.73 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.71 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.71 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.69 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 96.69 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.69 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.68 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.66 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.65 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.63 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.63 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.62 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 96.61 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.57 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 96.55 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.55 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.53 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 96.5 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.5 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.49 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.46 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.38 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 96.34 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.25 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 96.23 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.22 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.21 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.17 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 96.16 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.15 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.15 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.13 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 96.13 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 96.12 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.11 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 96.09 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.09 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 96.07 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 96.06 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.02 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.0 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 95.97 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 95.96 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 95.94 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 95.93 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 95.91 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 95.89 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 95.85 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 95.85 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.85 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 95.83 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 95.83 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 95.76 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 95.73 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 95.69 |
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-61 Score=403.17 Aligned_cols=249 Identities=34% Similarity=0.492 Sum_probs=238.5
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.+.+.++..+++|++|+++++++++++.++
T Consensus 4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||+....++.+.+.++|++++++|+.|+++++|+++|+|.+ ++.|+|||+||..+..+.++..+|++|
T Consensus 84 ~-G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~as 162 (255)
T 4g81_D 84 G-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAA 162 (255)
T ss_dssp T-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred C-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHH
Confidence 9 79999999999999999999999999999999999999999999999965 466999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+.+|+|++|.||+++|||||+|+||+++|+|......+++..+......|++++++|+|+|++++||+|+.+.|+||
T Consensus 163 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG 242 (255)
T 4g81_D 163 KGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYING 242 (255)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence 99999999999999999999999999999999999988877788888888999999999999999999999999999999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
|+|.+|||++.
T Consensus 243 ~~i~VDGG~~A 253 (255)
T 4g81_D 243 QIIYVDGGWLA 253 (255)
T ss_dssp CEEEESTTGGG
T ss_pred CEEEECCCeEe
Confidence 99999999864
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-60 Score=399.92 Aligned_cols=248 Identities=27% Similarity=0.405 Sum_probs=229.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++|+||++|||||++|||+++|+.|+++|++|++++|+++++++..++++..+.++..+++|++|+++++++++++.+++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 57999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred CCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+|||+||..+..+.++..+|++||
T Consensus 83 -G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK 161 (254)
T 4fn4_A 83 -SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK 161 (254)
T ss_dssp -SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred -CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence 79999999999754 5789999999999999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH-HH-HHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE-FV-DKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
+|+.+|+|++|.||+++|||||+|+||+++|+|........+ .. .......|.+++++|+|+|++++||+|+.+.|+|
T Consensus 162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iT 241 (254)
T 4fn4_A 162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVN 241 (254)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence 999999999999999999999999999999999765443322 22 2233446889999999999999999999999999
Q ss_pred ccEEEeCCCcCC
Q 024125 250 GQIISVDGGFTA 261 (272)
Q Consensus 250 G~~i~~dgG~~~ 261 (272)
||+|.+|||+++
T Consensus 242 G~~i~VDGG~t~ 253 (254)
T 4fn4_A 242 GDAVVVDGGLTV 253 (254)
T ss_dssp SCEEEESTTGGG
T ss_pred CCEEEeCCCccc
Confidence 999999999986
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-59 Score=389.35 Aligned_cols=242 Identities=32% Similarity=0.451 Sum_probs=225.4
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++|+||++|||||++|||+++|+.|+++|++|++++|+.+ ++..+++.+.+.++..+++|++|+++++++++
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~----- 76 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT----- 76 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----
Confidence 47899999999999999999999999999999999999864 35566777778899999999999998887764
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||+....++.+.+.++|++++++|+.|+++++|+++|+|.+++ .|+|||+||..+..+.++..+|++|
T Consensus 77 ~-g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~as 155 (247)
T 4hp8_A 77 D-AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAA 155 (247)
T ss_dssp T-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred h-CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHH
Confidence 3 6899999999999999999999999999999999999999999999997664 6999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+.+|+|++|.||+++|||||+|+||+++|+|......+++..+.+....|++++++|+|+|.+++||+|+.+.|+||
T Consensus 156 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG 235 (247)
T 4hp8_A 156 KHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHG 235 (247)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 99999999999999999999999999999999999888777777788888999999999999999999999999999999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
|+|.+|||++.
T Consensus 236 ~~i~VDGG~~A 246 (247)
T 4hp8_A 236 AILNVDGGWLA 246 (247)
T ss_dssp CEEEESTTGGG
T ss_pred CeEEECccccc
Confidence 99999999975
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-57 Score=384.52 Aligned_cols=242 Identities=29% Similarity=0.434 Sum_probs=219.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++ +.++..+++|++|+++++++++++.+++
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 101 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA- 101 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 489999999999999999999999999999999999999998887776 4567888999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++++++|+.|+++++|+++|+|+++ |+|||+||..+..+.++..+|++||+|
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--G~IInisS~~~~~~~~~~~~Y~asKaa 179 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAFSVYAASKAA 179 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeehhhccCCCCchHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999754 799999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+.+|+|++|.||+++|||||+|+||+++|++....... ++..+.+....|++++++|+|+|++++||+|+.+.|+
T Consensus 180 v~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~i 259 (273)
T 4fgs_A 180 LRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFV 259 (273)
T ss_dssp HHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence 99999999999999999999999999999997665432 2345566778999999999999999999999999999
Q ss_pred cccEEEeCCCcCC
Q 024125 249 TGQIISVDGGFTA 261 (272)
Q Consensus 249 ~G~~i~~dgG~~~ 261 (272)
|||+|.+|||++.
T Consensus 260 TG~~i~VDGG~s~ 272 (273)
T 4fgs_A 260 TGAELFVDGGSAQ 272 (273)
T ss_dssp CSCEEEESTTTTT
T ss_pred cCCeEeECcChhh
Confidence 9999999999875
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-57 Score=378.84 Aligned_cols=244 Identities=29% Similarity=0.386 Sum_probs=217.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++|+||++|||||++|||+++|+.|+++|++|++++|+.+..+ ..+++.+.+.++.++.+|++|+++++++++++.+++
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 6799999999999999999999999999999999999887654 344566667788899999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||+....+ .+.+.++|++.+++|+.+++.++|+++|+|++++ |+|||+||..+..+.++...|++||+
T Consensus 82 -G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKa 158 (258)
T 4gkb_A 82 -GRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKG 158 (258)
T ss_dssp -SCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHHH
Confidence 79999999999865444 4779999999999999999999999999997655 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCCCC-CCCCHHHHHHHHHHHhcCCCCC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQ-RVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
|+.+|+|++|.||+++|||||+|+||+++|+|....... ++.........|++ ++++|+|+|++++||+|+.+.|
T Consensus 159 av~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~ 238 (258)
T 4gkb_A 159 AQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASH 238 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 999999999999999999999999999999998765432 23456667788885 8999999999999999999999
Q ss_pred ccccEEEeCCCcC
Q 024125 248 ITGQIISVDGGFT 260 (272)
Q Consensus 248 ~~G~~i~~dgG~~ 260 (272)
+|||+|.+|||++
T Consensus 239 iTG~~i~VDGG~T 251 (258)
T 4gkb_A 239 TTGEWLFVDGGYT 251 (258)
T ss_dssp CCSCEEEESTTTT
T ss_pred ccCCeEEECCCcc
Confidence 9999999999986
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-57 Score=373.46 Aligned_cols=233 Identities=35% Similarity=0.570 Sum_probs=210.5
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++||++|||||++|||+++++.|+++|++|++++|+.+.+++ ....++..+++|++|++++++++++ + +
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~~----~-g 77 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFEA----L-P 77 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHHH----C-S
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHHh----c-C
Confidence 689999999999999999999999999999999999876542 2245788899999999998887764 5 7
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|++|||||+. .++.+.+.++|++++++|+.+++.++|+++|+|++++ |+|||+||..+..+.++...|++||+|+
T Consensus 78 ~iDiLVNNAGi~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav 154 (242)
T 4b79_A 78 RLDVLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAI 154 (242)
T ss_dssp CCSEEEECCCCC--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred CCCEEEECCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHH
Confidence 999999999975 3677889999999999999999999999999998654 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
.+|+|++|.||+++|||||+|+||+++|+|......+++..+.+....|++++++|+|+|++++||+|+.+.|+|||+|.
T Consensus 155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~ 234 (242)
T 4b79_A 155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLA 234 (242)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEE
Confidence 99999999999999999999999999999998887777888888899999999999999999999999999999999999
Q ss_pred eCCCcCC
Q 024125 255 VDGGFTA 261 (272)
Q Consensus 255 ~dgG~~~ 261 (272)
+|||++.
T Consensus 235 VDGG~la 241 (242)
T 4b79_A 235 VDGGYLC 241 (242)
T ss_dssp ESTTGGG
T ss_pred ECccHhh
Confidence 9999874
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-55 Score=365.97 Aligned_cols=234 Identities=24% Similarity=0.368 Sum_probs=213.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|+||||||++|||+++|+.|+++|++|++++|+++.++++.+ ...++..+++|++|+++++++++++.+++ +++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~i 76 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRI 76 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 5999999999999999999999999999999999887765543 34578889999999999999999999999 799
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|++++ |+|||+||..+..+.++..+|++||+|+.+
T Consensus 77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ 155 (247)
T 3ged_A 77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVA 155 (247)
T ss_dssp CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998876 999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeC
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVD 256 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~d 256 (272)
|+|++|.||++ |||||+|+||+++|++..++ .+......|++++++|+|+|+++.||+++ +|+|||+|.+|
T Consensus 156 ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~------~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~VD 226 (247)
T 3ged_A 156 LTHALAMSLGP-DVLVNCIAPGWINVTEQQEF------TQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETIIVD 226 (247)
T ss_dssp HHHHHHHHHTT-TSEEEEEEECSBCCCC---C------CHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEEES
T ss_pred HHHHHHHHHCC-CCEEEEEecCcCCCCCcHHH------HHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEEEC
Confidence 99999999987 99999999999999987554 23345678999999999999999999984 69999999999
Q ss_pred CCcCCCCCC
Q 024125 257 GGFTANGFN 265 (272)
Q Consensus 257 gG~~~~~~~ 265 (272)
||++.+...
T Consensus 227 GG~s~r~~~ 235 (247)
T 3ged_A 227 GGMSKRMIY 235 (247)
T ss_dssp TTGGGCCCC
T ss_pred cCHHHhCcc
Confidence 999988543
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-55 Score=367.41 Aligned_cols=246 Identities=23% Similarity=0.227 Sum_probs=226.4
Q ss_pred CCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 13 ~~l~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++|+||++|||||+| |||+++|+.|+++|++|++++|+++.++++.+++++.+ .++.++++|++++++++++++++.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 689999999999875 99999999999999999999999999999888887654 478889999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh
Q 024125 90 SKFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~ 165 (272)
+++ +++|++|||||+... .++.+.+.++|+..+++|+.+++.+++.+.|+|++ .|+|||+||..+..+.++..
T Consensus 82 ~~~-G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~~ 158 (256)
T 4fs3_A 82 KDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYN 158 (256)
T ss_dssp HHH-CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTTH
T ss_pred HHh-CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccch
Confidence 999 799999999997543 45567889999999999999999999999887754 48999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
.|++||+|+.+|+|+++.||+++|||||+|+||+++|++.......++..+......|++++++|+|+|++++||+|+.+
T Consensus 159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a 238 (256)
T 4fs3_A 159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLS 238 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999999999999999999999999999999999988766556677788889999999999999999999999999
Q ss_pred CCccccEEEeCCCcCC
Q 024125 246 SYITGQIISVDGGFTA 261 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~ 261 (272)
.|+|||+|.+|||++.
T Consensus 239 ~~iTG~~i~VDGG~~a 254 (256)
T 4fs3_A 239 SGVTGENIHVDSGFHA 254 (256)
T ss_dssp TTCCSCEEEESTTGGG
T ss_pred cCccCCEEEECcCHHh
Confidence 9999999999999874
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-55 Score=368.14 Aligned_cols=242 Identities=27% Similarity=0.371 Sum_probs=214.3
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
..+.++|+||++|||||++|||+++|+.|+++|++|++++|++++ ...+...+++|++++++++++++++
T Consensus 3 m~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~ 72 (261)
T 4h15_A 3 MIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEAT 72 (261)
T ss_dssp CCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHHH
T ss_pred chhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999997542 1122346789999999999999999
Q ss_pred HHHcCCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC-CCh
Q 024125 89 GSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGS 165 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~-~~~ 165 (272)
.+++ +++|++|||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+|||+||..+..+.+ +..
T Consensus 73 ~~~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~ 151 (261)
T 4h15_A 73 RQRL-GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTT 151 (261)
T ss_dssp HHHT-SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCH
T ss_pred HHHc-CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccH
Confidence 9999 79999999999743 4578899999999999999999999999999999998889999999999988875 578
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC------------HHHHHHHHhcCCCCCCCCHHHH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN------------KEFVDKVIARTPLQRVGEPEEV 233 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~ 233 (272)
.|++||+|+.+|+|+++.||+++|||||+|+||+++|++....... .+.........|++++++|+|+
T Consensus 152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peev 231 (261)
T 4h15_A 152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEV 231 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHH
Confidence 9999999999999999999999999999999999999997654321 1234444567899999999999
Q ss_pred HHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 234 ASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 234 a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
|++++||+|+.+.|+|||+|.+|||+..
T Consensus 232 A~~v~fLaS~~a~~itG~~i~VDGG~v~ 259 (261)
T 4h15_A 232 ANLIAFLASDRAASITGAEYTIDGGTVP 259 (261)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred HHHHHHHhCchhcCccCcEEEECCcCcc
Confidence 9999999999999999999999999853
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-52 Score=352.14 Aligned_cols=250 Identities=32% Similarity=0.506 Sum_probs=233.3
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.
T Consensus 5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 5 ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp -CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+++ +++|++|||||.....++ +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus 85 ~~~-g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 162 (256)
T 3gaf_A 85 DQF-GKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGS 162 (256)
T ss_dssp HHH-SCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHH
Confidence 999 699999999999777777 889999999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
||+|+++|+++++.|++++||+||+|+||+++|++..... .++.........|.+++.+|+|++++++||+++...++|
T Consensus 163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~it 241 (256)
T 3gaf_A 163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWIS 241 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCcc
Confidence 9999999999999999999999999999999999987654 345566677788999999999999999999999999999
Q ss_pred ccEEEeCCCcCCC
Q 024125 250 GQIISVDGGFTAN 262 (272)
Q Consensus 250 G~~i~~dgG~~~~ 262 (272)
|++|++|||+...
T Consensus 242 G~~i~vdgG~~~~ 254 (256)
T 3gaf_A 242 GQVLTVSGGGVQE 254 (256)
T ss_dssp SCEEEESTTSCCC
T ss_pred CCEEEECCCcccc
Confidence 9999999998764
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-52 Score=352.54 Aligned_cols=252 Identities=31% Similarity=0.452 Sum_probs=233.8
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
|.+.+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.+++++++++
T Consensus 2 p~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 2 PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp -CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 345678999999999999999999999999999999999999999999998887765 6899999999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSI 166 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~ 166 (272)
+.+++ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+. .+.++...
T Consensus 82 ~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~ 160 (262)
T 3pk0_A 82 AVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSH 160 (262)
T ss_dssp HHHHH-SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHH
T ss_pred HHHHh-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChh
Confidence 99999 69999999999988889999999999999999999999999999999998888999999999886 77888999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|++||+++++|+++++.|++++||+||+|+||+++|++.... .++.........|.+++.+|+|+|+++.||+++.+.
T Consensus 161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~ 238 (262)
T 3pk0_A 161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAG 238 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999999997654 345667777888999999999999999999999999
Q ss_pred CccccEEEeCCCcCCCC
Q 024125 247 YITGQIISVDGGFTANG 263 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~~ 263 (272)
++||++|.+|||++++.
T Consensus 239 ~itG~~i~vdGG~~~~~ 255 (262)
T 3pk0_A 239 YITGQAIAVDGGQVLPE 255 (262)
T ss_dssp TCCSCEEEESTTTTCCS
T ss_pred CCcCCEEEECCCeecCc
Confidence 99999999999998863
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-52 Score=353.04 Aligned_cols=250 Identities=29% Similarity=0.395 Sum_probs=228.2
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CC-CeEEEEEecCCCHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KG-FVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.. .+ .++.++.+|++|.++++++++++.
T Consensus 3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999999998888876 33 358899999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+.+ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus 83 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 161 (265)
T 3lf2_A 83 RTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA 161 (265)
T ss_dssp HHH-CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence 999 6999999999998888899999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-------CHHHHHHHHhc---CCCCCCCCHHHHHHHHHH
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-------NKEFVDKVIAR---TPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~e~a~~~~~ 239 (272)
||+|+++|+++++.|++++||+||+|+||+++|++...... ..+........ .|.+++.+|+|+|++++|
T Consensus 162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f 241 (265)
T 3lf2_A 162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILF 241 (265)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999876543 22222222222 899999999999999999
Q ss_pred HhcCCCCCccccEEEeCCCcCCC
Q 024125 240 LCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
|+++.+.|+||++|.+|||++++
T Consensus 242 L~s~~~~~itG~~i~vdGG~~~~ 264 (265)
T 3lf2_A 242 LASPLSAYTTGSHIDVSGGLSRH 264 (265)
T ss_dssp HHSGGGTTCCSEEEEESSSCCCC
T ss_pred HhCchhcCcCCCEEEECCCCcCC
Confidence 99999999999999999999875
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-52 Score=355.99 Aligned_cols=250 Identities=32% Similarity=0.501 Sum_probs=236.5
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.++
T Consensus 21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999888888999999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||
T Consensus 101 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK 179 (271)
T 4ibo_A 101 G-IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAK 179 (271)
T ss_dssp T-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred C-CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHH
Confidence 8 689999999999888889999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+|+++|+++++.|++++||+||+|+||+++|++.......++...+.....|.+++.+|+|++++++||+++...++||+
T Consensus 180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~ 259 (271)
T 4ibo_A 180 GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQ 259 (271)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCc
Confidence 99999999999999999999999999999999988776666777777888999999999999999999999999999999
Q ss_pred EEEeCCCcCCC
Q 024125 252 IISVDGGFTAN 262 (272)
Q Consensus 252 ~i~~dgG~~~~ 262 (272)
+|.+|||+++.
T Consensus 260 ~i~vdGG~~~~ 270 (271)
T 4ibo_A 260 IIYVDGGMLSV 270 (271)
T ss_dssp EEEESTTGGGB
T ss_pred EEEECCCeecc
Confidence 99999998754
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-52 Score=354.19 Aligned_cols=251 Identities=31% Similarity=0.444 Sum_probs=234.2
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
..+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++|.++++++++++.
T Consensus 14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 44678999999999999999999999999999999999999999988888876 46789999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+++ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||..+..+.++...|+
T Consensus 94 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 172 (266)
T 4egf_A 94 EAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYC 172 (266)
T ss_dssp HHH-TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred HHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHH
Confidence 999 7999999999998888889999999999999999999999999999998765 58999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+|+++|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+|++++||+++...++
T Consensus 173 asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~i 252 (266)
T 4egf_A 173 TSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMI 252 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence 99999999999999999999999999999999999988776566666777788999999999999999999999999999
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
||++|++|||++++
T Consensus 253 tG~~i~vdGG~~~~ 266 (266)
T 4egf_A 253 NGVDIPVDGGYTMG 266 (266)
T ss_dssp CSCEEEESTTGGGC
T ss_pred cCcEEEECCCccCC
Confidence 99999999998763
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-52 Score=349.36 Aligned_cols=250 Identities=27% Similarity=0.392 Sum_probs=232.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++|++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...+.++.++.+|++|.++++++++++.+++ +
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 81 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-G 81 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 68999999999999999999999999999886 899999999999888878889999999999999999999999999 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||+|+
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 161 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAAL 161 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence 99999999999888888999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
++|+++++.|++++||+||+|+||+++|++........+.........|.+++.+|+|++++++||+++.+.++||++|.
T Consensus 162 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~ 241 (258)
T 3oid_A 162 EALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTII 241 (258)
T ss_dssp HHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEE
T ss_pred HHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEE
Confidence 99999999999999999999999999999987765444556667778999999999999999999999999999999999
Q ss_pred eCCCcCCCCCCC
Q 024125 255 VDGGFTANGFNP 266 (272)
Q Consensus 255 ~dgG~~~~~~~~ 266 (272)
+|||+++...+.
T Consensus 242 vdGG~~~~~~~~ 253 (258)
T 3oid_A 242 VDGGRSLLVLEH 253 (258)
T ss_dssp ESTTGGGBCC--
T ss_pred ECCCccCCCCCC
Confidence 999999876543
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-51 Score=344.77 Aligned_cols=244 Identities=33% Similarity=0.487 Sum_probs=225.7
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.. ++..+.+|++|.++++++++++.++
T Consensus 4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999999998888777653 4677899999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||
T Consensus 81 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (248)
T 3op4_A 81 F-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK 159 (248)
T ss_dssp H-CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence 9 699999999999888888999999999999999999999999999999888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+|+++|+++++.|++++||+||+|+||+++|++.... .++.........|.+++.+|+|+++++.||+++...++||+
T Consensus 160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~ 237 (248)
T 3op4_A 160 AGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGE 237 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCc
Confidence 9999999999999999999999999999999997654 23445556677899999999999999999999999999999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
+|.+|||+++
T Consensus 238 ~i~vdgG~~~ 247 (248)
T 3op4_A 238 TLHVNGGMYM 247 (248)
T ss_dssp EEEESTTSSC
T ss_pred EEEECCCeec
Confidence 9999999864
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-51 Score=347.82 Aligned_cols=249 Identities=30% Similarity=0.402 Sum_probs=233.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCC---eEEEEEecCCCHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF---VVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+. ++.++.+|++|.++++++++++.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 568999999999999999999999999999999999999999999988877654 88999999999999999999999
Q ss_pred HHcCCCccEEEECCCC-CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 90 SKFNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 90 ~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+++ +++|++|||||. ....++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||..+..+.++...|+
T Consensus 87 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 165 (281)
T 3svt_A 87 AWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYG 165 (281)
T ss_dssp HHH-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHH
T ss_pred HHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHH
Confidence 999 799999999997 566788899999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+++++|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|++++++||+++...++
T Consensus 166 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~i 245 (281)
T 3svt_A 166 VTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFV 245 (281)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCC
Confidence 99999999999999999999999999999999999988776666667777788999999999999999999999999999
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
||++|++|||+.+.
T Consensus 246 tG~~~~vdgG~~~~ 259 (281)
T 3svt_A 246 TGQVINVDGGQMLR 259 (281)
T ss_dssp CSCEEEESTTGGGS
T ss_pred CCCEEEeCCChhcc
Confidence 99999999999887
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-51 Score=348.12 Aligned_cols=247 Identities=32% Similarity=0.476 Sum_probs=230.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++..+.+|++|.++++++++++.+++
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 35889999999999999999999999999999999999999999988888777788899999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||..+..+.++...|++||+
T Consensus 104 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 182 (270)
T 3ftp_A 104 -GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKA 182 (270)
T ss_dssp -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHH
Confidence 6999999999998888888999999999999999999999999999998888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
|+++|+++++.|++++||+||+|+||+++|++.... ..+.........|.+++.+|+|+|+++.||+++...++||++
T Consensus 183 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~ 260 (270)
T 3ftp_A 183 GVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTT 260 (270)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcE
Confidence 999999999999999999999999999999998765 334556667788999999999999999999999999999999
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
|++|||+.++
T Consensus 261 i~vdGG~~~s 270 (270)
T 3ftp_A 261 LHVNGGMFMS 270 (270)
T ss_dssp EEESTTSSCC
T ss_pred EEECCCcccC
Confidence 9999998763
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-51 Score=349.63 Aligned_cols=250 Identities=30% Similarity=0.397 Sum_probs=232.9
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.+
T Consensus 36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD 115 (293)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999988887765 6889999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGA 169 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~~ 169 (272)
++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+. .+.++...|++
T Consensus 116 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~a 194 (293)
T 3rih_A 116 AF-GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGA 194 (293)
T ss_dssp HH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHH
Confidence 99 79999999999988888999999999999999999999999999999998888999999999986 78889999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
||+++++|+++++.|++++||+||+|+||+++|++..... ++.........|.+++.+|+|+++++.||+++.+.++|
T Consensus 195 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~it 272 (293)
T 3rih_A 195 SKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG--EEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYIT 272 (293)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC--HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCC
Confidence 9999999999999999999999999999999999987653 45566777888999999999999999999999999999
Q ss_pred ccEEEeCCCcCCCCC
Q 024125 250 GQIISVDGGFTANGF 264 (272)
Q Consensus 250 G~~i~~dgG~~~~~~ 264 (272)
|++|.+|||++++..
T Consensus 273 G~~i~vdGG~~~~~~ 287 (293)
T 3rih_A 273 GQAIVVDGGQVLPES 287 (293)
T ss_dssp SCEEEESTTTTCBSS
T ss_pred CCEEEECCCccCCCC
Confidence 999999999998744
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-51 Score=346.66 Aligned_cols=249 Identities=27% Similarity=0.400 Sum_probs=216.0
Q ss_pred cccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHH
Q 024125 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 7 ~~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
.-+++.+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.++++++++
T Consensus 17 ~g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~ 93 (266)
T 3grp_A 17 QGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAE 93 (266)
T ss_dssp ----CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHH
T ss_pred CCCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHH
Confidence 3455667899999999999999999999999999999999999999888776654 4578899999999999999999
Q ss_pred HHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
++.+++ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++...
T Consensus 94 ~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~ 172 (266)
T 3grp_A 94 VAEREM-EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTN 172 (266)
T ss_dssp HHHHHH-TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHH
T ss_pred HHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchh
Confidence 999999 6999999999998888888999999999999999999999999999999888899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|++||+|+++|+++++.|++++||+||+|+||+++|++.... .++.........|.+++.+|+|+|++++||+++.+.
T Consensus 173 Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~ 250 (266)
T 3grp_A 173 YCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAA 250 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999999998765 345566677788999999999999999999999999
Q ss_pred CccccEEEeCCCcCC
Q 024125 247 YITGQIISVDGGFTA 261 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~ 261 (272)
++||++|.+|||+++
T Consensus 251 ~itG~~i~vdGG~~~ 265 (266)
T 3grp_A 251 YLTGQTLHINGGMAM 265 (266)
T ss_dssp TCCSCEEEESTTC--
T ss_pred CccCCEEEECCCeee
Confidence 999999999999864
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-51 Score=344.05 Aligned_cols=247 Identities=23% Similarity=0.280 Sum_probs=229.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 86 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY- 86 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred CCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.. ...++.+.+.++|++++++|+.++++++++++|+|++++ |+||++||..+..+.++...|++||+
T Consensus 87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa 165 (264)
T 3ucx_A 87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKS 165 (264)
T ss_dssp SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHH
Confidence 7999999999984 667888999999999999999999999999999998766 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
|+++|+++++.|++++||+||+|+||+++|++...... .++.........|.+++.+|+|+|++++||+++
T Consensus 166 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~ 245 (264)
T 3ucx_A 166 ALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASD 245 (264)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999876532 133455667788999999999999999999999
Q ss_pred CCCCccccEEEeCCCcCCC
Q 024125 244 AASYITGQIISVDGGFTAN 262 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~~ 262 (272)
.+.++||++|.+|||.+++
T Consensus 246 ~~~~itG~~i~vdGG~~~~ 264 (264)
T 3ucx_A 246 LASGITGQALDVNCGEYKA 264 (264)
T ss_dssp GGTTCCSCEEEESTTSSCC
T ss_pred cccCCCCCEEEECCCccCC
Confidence 9999999999999998763
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-51 Score=352.96 Aligned_cols=252 Identities=30% Similarity=0.394 Sum_probs=221.3
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
..+.+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++
T Consensus 20 ~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 20 FQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp -------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred hhhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999998877888999999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC--CCCCCh
Q 024125 89 GSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--HVGSGS 165 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~--~~~~~~ 165 (272)
.+++ +++|++|||||+... .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+.. +.++..
T Consensus 100 ~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~ 178 (283)
T 3v8b_A 100 VLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGAT 178 (283)
T ss_dssp HHHH-SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCH
T ss_pred HHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCch
Confidence 9999 799999999998543 788899999999999999999999999999999988889999999999877 778889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHH-----HHHHHhcCCC--CCCCCHHHHHHHHH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEF-----VDKVIARTPL--QRVGEPEEVASLVA 238 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~e~a~~~~ 238 (272)
.|++||+|+++|+++++.|++++||+||+|+||+++|++........+. ........|. +++.+|+|+|++++
T Consensus 179 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~ 258 (283)
T 3v8b_A 179 AYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIR 258 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999997654322221 1112233455 88899999999999
Q ss_pred HHhcCCCCCccccEEEeCCCcCC
Q 024125 239 YLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 239 ~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
||+++.+.++||++|.+|||+++
T Consensus 259 fL~s~~a~~itG~~i~vdGG~~~ 281 (283)
T 3v8b_A 259 FLVSERARHVTGSPVWIDGGQGL 281 (283)
T ss_dssp HHTSGGGTTCCSCEEEESTTHHH
T ss_pred HHcCccccCCcCCEEEECcCccc
Confidence 99999999999999999999864
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-50 Score=344.74 Aligned_cols=251 Identities=29% Similarity=0.466 Sum_probs=226.1
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.....+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++|.+++++++++
T Consensus 18 ~~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~ 94 (277)
T 4dqx_A 18 LYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEK 94 (277)
T ss_dssp ----CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHH
T ss_pred cccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHH
Confidence 334557899999999999999999999999999999999999998888777664 45788899999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+.+.+ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|
T Consensus 95 ~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 173 (277)
T 4dqx_A 95 TTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAY 173 (277)
T ss_dssp HHHHH-SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHH
T ss_pred HHHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhH
Confidence 99999 69999999999988888899999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-C---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-N---KEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
++||+|+++|+++++.|++++||+||+|+||+++|++...... . ...........|.+++.+|+|+|++++||+++
T Consensus 174 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~ 253 (277)
T 4dqx_A 174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASD 253 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999544322 1 22333466778999999999999999999999
Q ss_pred CCCCccccEEEeCCCcCCC
Q 024125 244 AASYITGQIISVDGGFTAN 262 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~~ 262 (272)
...++||++|++|||+++.
T Consensus 254 ~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 254 RSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp GGTTCCSCEEEESSSSSSC
T ss_pred ccCCCcCCEEEECCchhhh
Confidence 9999999999999998875
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=344.93 Aligned_cols=249 Identities=32% Similarity=0.461 Sum_probs=228.3
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
..++++||++|||||++|||++++++|+++|++|++++|+ +..++..+++...+.++.++.+|++|.++++++.+.+ +
T Consensus 25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-~ 102 (273)
T 3uf0_A 25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL-A 102 (273)
T ss_dssp CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHH-H
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH-H
Confidence 3467899999999999999999999999999999999966 4567777777777788999999999999999995554 5
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.+ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus 103 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as 181 (273)
T 3uf0_A 103 AT-RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAAS 181 (273)
T ss_dssp HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred hc-CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHH
Confidence 55 68999999999988888999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+++|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+|++++||+++.+.++||
T Consensus 182 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG 261 (273)
T 3uf0_A 182 KHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHG 261 (273)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence 99999999999999999999999999999999998877666667777778899999999999999999999999999999
Q ss_pred cEEEeCCCcCCC
Q 024125 251 QIISVDGGFTAN 262 (272)
Q Consensus 251 ~~i~~dgG~~~~ 262 (272)
++|++|||++++
T Consensus 262 ~~i~vdGG~~~s 273 (273)
T 3uf0_A 262 QVLAVDGGWLAS 273 (273)
T ss_dssp CEEEESTTGGGC
T ss_pred CEEEECcCccCC
Confidence 999999998763
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=346.01 Aligned_cols=246 Identities=33% Similarity=0.508 Sum_probs=227.3
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+++ +
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g 100 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-G 100 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence 578999999999999999999999999999999999999999999998878889999999999999999999999999 7
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH--HHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP--LLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~--~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++| .|++++.|+||++||..+..+.++...|++||+
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKa 180 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKH 180 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHH
Confidence 999999999998888889999999999999999999999999999 587777799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
|+++|+++++.|++++||+||+|+||+++|++...... .++....+....|.+++.+|+|+|+++.||+++
T Consensus 181 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 260 (279)
T 3sju_A 181 GVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTD 260 (279)
T ss_dssp HHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999876532 234566677788999999999999999999999
Q ss_pred CCCCccccEEEeCCCcCC
Q 024125 244 AASYITGQIISVDGGFTA 261 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~ 261 (272)
.+.++||++|++|||+++
T Consensus 261 ~a~~itG~~i~vdGG~~~ 278 (279)
T 3sju_A 261 AAASITAQALNVCGGLGN 278 (279)
T ss_dssp GGGGCCSCEEEESTTCCC
T ss_pred cccCcCCcEEEECCCccC
Confidence 999999999999999875
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=345.89 Aligned_cols=249 Identities=30% Similarity=0.364 Sum_probs=229.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|.++++++++++.+++
T Consensus 4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35889999999999999999999999999999999999999999999888777889999999999999999999999999
Q ss_pred CCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhHHH
Q 024125 93 NGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGAT 170 (272)
Q Consensus 93 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~~s 170 (272)
+++|++|||||+. ...++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+. .+.++...|++|
T Consensus 84 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as 162 (280)
T 3tox_A 84 -GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAAS 162 (280)
T ss_dssp -SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHH
Confidence 6999999999976 4578888999999999999999999999999999999888999999999987 678889999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh--hCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL--ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
|+|+++|+++++.|++++||+||+|+||+++|++..... ..++.........|.+++.+|+|+|++++||+++...++
T Consensus 163 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~i 242 (280)
T 3tox_A 163 KAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFV 242 (280)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCC
Confidence 999999999999999999999999999999999976522 134555666777899999999999999999999999999
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
||++|++|||+++.
T Consensus 243 tG~~i~vdGG~~~~ 256 (280)
T 3tox_A 243 TGAALLADGGASVT 256 (280)
T ss_dssp CSCEEEESTTGGGC
T ss_pred cCcEEEECCCcccc
Confidence 99999999998876
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-51 Score=344.11 Aligned_cols=250 Identities=27% Similarity=0.425 Sum_probs=226.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 81 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF- 81 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999999999999999999999999998887777789999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL-KASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.++|++++++|+.++++++++++|+| ++++.|+||++||..+..+.++...|++||+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 161 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKA 161 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHH
Confidence 699999999999888888999999999999999999999999999999 4555799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHc-cCCeeEEEeeCCcccChhhHhhh-hCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 173 AMNQLTRNLACEWA-KDNIRTNSVAPWYTKTSLVERLL-ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 173 a~~~~~~~la~el~-~~~i~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+++|+++++.|++ ++||+||+|+||+++|++..... ..++.........|.+++.+|+|+|++++||+++.+.++||
T Consensus 162 a~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG 241 (257)
T 3imf_A 162 GVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYING 241 (257)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccC
Confidence 99999999999997 77999999999999999753321 11223344566789999999999999999999999999999
Q ss_pred cEEEeCCCcCCCCC
Q 024125 251 QIISVDGGFTANGF 264 (272)
Q Consensus 251 ~~i~~dgG~~~~~~ 264 (272)
++|.+|||++++.+
T Consensus 242 ~~i~vdGG~~~~~~ 255 (257)
T 3imf_A 242 TCMTMDGGQHLHQY 255 (257)
T ss_dssp CEEEESTTTTSCCC
T ss_pred CEEEECCCcccCCC
Confidence 99999999998754
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-51 Score=346.99 Aligned_cols=248 Identities=32% Similarity=0.485 Sum_probs=227.3
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|.++++++++++.
T Consensus 25 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 25 LDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp GGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 34567999999999999999999999999999999999999999999999988877889999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CeEEEecCCCCCCCC--CCChh
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHV--GSGSI 166 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~ii~vsS~~~~~~~--~~~~~ 166 (272)
+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++. ++||++||..+.... ++...
T Consensus 105 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~ 183 (276)
T 3r1i_A 105 GEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSH 183 (276)
T ss_dssp HHH-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHH
T ss_pred HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcch
Confidence 999 69999999999988888889999999999999999999999999999987763 899999999887653 36788
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|++||+|+++|+++++.|++++||+||+|+||+++|++..... +.........|.+++.+|+|+|++++||+++.+.
T Consensus 184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~ 260 (276)
T 3r1i_A 184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA---DYHALWEPKIPLGRMGRPEELTGLYLYLASAASS 260 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG---GGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999999999999999987652 2345556778999999999999999999999999
Q ss_pred CccccEEEeCCCcCC
Q 024125 247 YITGQIISVDGGFTA 261 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~ 261 (272)
++||++|.+|||+++
T Consensus 261 ~itG~~i~vdGG~~~ 275 (276)
T 3r1i_A 261 YMTGSDIVIDGGYTC 275 (276)
T ss_dssp TCCSCEEEESTTTTC
T ss_pred CccCcEEEECcCccC
Confidence 999999999999875
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-51 Score=341.47 Aligned_cols=245 Identities=28% Similarity=0.361 Sum_probs=222.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+++||++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++..+.+|++|.++++++++++.+.+
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 3588999999999999999999999999999999999999988887766 4578889999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..+..+.++...|++||
T Consensus 79 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 157 (247)
T 3rwb_A 79 -GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK 157 (247)
T ss_dssp -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence 6999999999998888889999999999999999999999999999998865 68999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+|+++|+++++.|++++||+||+|+||+++|++........ .........|.++..+|+|+++++.||+++...++||+
T Consensus 158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~ 236 (247)
T 3rwb_A 158 GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNE-AFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQ 236 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGG-GHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhH-HHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCC
Confidence 99999999999999999999999999999999987543221 11222233788999999999999999999999999999
Q ss_pred EEEeCCCcCCC
Q 024125 252 IISVDGGFTAN 262 (272)
Q Consensus 252 ~i~~dgG~~~~ 262 (272)
+|.+|||++.+
T Consensus 237 ~i~vdGG~~~~ 247 (247)
T 3rwb_A 237 TLNVDAGMVRH 247 (247)
T ss_dssp EEEESTTSSCC
T ss_pred EEEECCCccCC
Confidence 99999998764
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=339.60 Aligned_cols=244 Identities=31% Similarity=0.458 Sum_probs=226.3
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++|++|||||++|||++++++|+++|++|++++| +.+..++..+++...+.++.++++|++|.++++++++++.+++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 80 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF- 80 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 46899999999999999999999999999988876 5677888888888878889999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||+|
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 160 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAG 160 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence 69999999999988888899999999999999999999999999999988888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+++|+++++.|++++||+||+|+||+++|++.... .++.........|.+++.+|+|+++++.||+++...++||++|
T Consensus 161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i 238 (246)
T 3osu_A 161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTI 238 (246)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence 99999999999999999999999999999997654 3455666777889999999999999999999999999999999
Q ss_pred EeCCCcCC
Q 024125 254 SVDGGFTA 261 (272)
Q Consensus 254 ~~dgG~~~ 261 (272)
++|||+++
T Consensus 239 ~vdgG~~~ 246 (246)
T 3osu_A 239 HVNGGMYM 246 (246)
T ss_dssp EESTTSCC
T ss_pred EeCCCccC
Confidence 99999864
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=344.43 Aligned_cols=246 Identities=30% Similarity=0.438 Sum_probs=226.0
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+.+++++|++|||||++|||++++++|+++|++|++++| +.+..++..+++...+.++.++.+|++|.++++++++++.
T Consensus 22 ~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVI 101 (269)
T ss_dssp --CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999888 6777888888888777889999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+++ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus 102 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 180 (269)
T 4dmm_A 102 ERW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSA 180 (269)
T ss_dssp HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHH
Confidence 999 6999999999998888888999999999999999999999999999999888899999999999989999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC-CCCCc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP-AASYI 248 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~-~~~~~ 248 (272)
||+|+++|+++++.|++++||+||+|+||+++|++..... ........|.+++.+|+|+|+++.||+++ ...++
T Consensus 181 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-----~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~i 255 (269)
T 4dmm_A 181 AKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELA-----AEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYI 255 (269)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHH-----HHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGC
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccccc-----HHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCC
Confidence 9999999999999999999999999999999999975442 24556778999999999999999999997 78999
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
||++|++|||+++.
T Consensus 256 tG~~i~vdGG~~~s 269 (269)
T 4dmm_A 256 TGQVINIDGGLVMA 269 (269)
T ss_dssp CSCEEEESTTSCCC
T ss_pred cCCEEEECCCeecC
Confidence 99999999998763
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-50 Score=339.91 Aligned_cols=253 Identities=60% Similarity=0.988 Sum_probs=224.0
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
..+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+
T Consensus 15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 15 GRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp -CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999998888888877677888999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.+++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 174 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS 174 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHH
Confidence 88458999999999987788889999999999999999999999999999988777999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|+++++|+++++.|++++||+||+|+||+++|++...... ..+.........|.+++.+|+|+|+++.||+++...
T Consensus 175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~ 254 (273)
T 1ae1_A 175 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAAS 254 (273)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 9999999999999999999999999999999999765432 233444555668899999999999999999999899
Q ss_pred CccccEEEeCCCcCCCC
Q 024125 247 YITGQIISVDGGFTANG 263 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~~ 263 (272)
+++|++|.+|||+++.+
T Consensus 255 ~~tG~~i~vdGG~~~~~ 271 (273)
T 1ae1_A 255 YITGQIIWADGGFTANG 271 (273)
T ss_dssp TCCSCEEEESTTGGGCS
T ss_pred CcCCCEEEECCCcccCC
Confidence 99999999999988764
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=345.48 Aligned_cols=250 Identities=28% Similarity=0.375 Sum_probs=229.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
..++||++|||||++|||++++++|+++|++|++++|+.++.++..+++.. .+.++.++.+|++|.++++++++++.++
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 458899999999999999999999999999999999999998888877754 3678999999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|+||||||.....++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||..+..+.++...|++||
T Consensus 103 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (277)
T 4fc7_A 103 F-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAK 181 (277)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHH
T ss_pred c-CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence 9 799999999998888888899999999999999999999999999999887779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHh-hhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER-LLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
+|+++|+++++.|++++||+||+|+||+++|++... .....+.........|.+++.+|+|+|++++||+++.+.++||
T Consensus 182 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG 261 (277)
T 4fc7_A 182 AAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTG 261 (277)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCC
Confidence 999999999999999999999999999999987543 3334555666777899999999999999999999999999999
Q ss_pred cEEEeCCCcCCCC
Q 024125 251 QIISVDGGFTANG 263 (272)
Q Consensus 251 ~~i~~dgG~~~~~ 263 (272)
++|.+|||+++..
T Consensus 262 ~~i~vdGG~~~~~ 274 (277)
T 4fc7_A 262 AVLVADGGAWLTF 274 (277)
T ss_dssp CEEEESTTHHHHC
T ss_pred CEEEECCCcccCC
Confidence 9999999987764
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-50 Score=343.01 Aligned_cols=251 Identities=26% Similarity=0.329 Sum_probs=221.8
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhCCCeEEEEEecCCC
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------------EVELNKCLKEWQSKGFVVSGSVCDAAS 77 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~ 77 (272)
.+..++++|++|||||++|||++++++|+++|++|++++|+ .+.+++..+++...+.++.++.+|++|
T Consensus 3 ~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 82 (281)
T 3s55_A 3 GSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD 82 (281)
T ss_dssp ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 34567899999999999999999999999999999999997 667777777777778889999999999
Q ss_pred HHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
.++++++++++.+.+ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+
T Consensus 83 ~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~ 161 (281)
T 3s55_A 83 RAALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG 161 (281)
T ss_dssp HHHHHHHHHHHHHHH-TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence 999999999999999 6999999999998888899999999999999999999999999999998888899999999999
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh------h-----CHHH-HH--HHHhcCC
Q 024125 158 LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL------E-----NKEF-VD--KVIARTP 223 (272)
Q Consensus 158 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~------~-----~~~~-~~--~~~~~~~ 223 (272)
..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++..... + .... .. ......+
T Consensus 162 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (281)
T 3s55_A 162 HSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY 241 (281)
T ss_dssp GSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC
Confidence 9999999999999999999999999999999999999999999999864210 0 0111 11 1122233
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 224 LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 224 ~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+++.+|+|+|++++||+++...++||++|++|||++++
T Consensus 242 -~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 242 -APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred -cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 78899999999999999999999999999999998875
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-50 Score=339.87 Aligned_cols=247 Identities=27% Similarity=0.381 Sum_probs=222.6
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+.++++|++|||||++|||++++++|+++|++|+++++ +.+..++..+++...+.++.++.+|++|.++++++++++.
T Consensus 12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV 91 (270)
T ss_dssp CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999999999998765 5667788888888878889999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC-CCCCCCCChhhH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG-GLSHVGSGSIYG 168 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~-~~~~~~~~~~Y~ 168 (272)
+++ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++ .|+||++||.. ...+.++...|+
T Consensus 92 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~ 168 (270)
T 3is3_A 92 AHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYS 168 (270)
T ss_dssp HHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhH
Confidence 999 69999999999988888999999999999999999999999999999966 48999999988 567788899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh----------hCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL----------ENKEFVDKVIARTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~ 238 (272)
+||+|+++|+++++.|++++||+||+|+||+++|++..... ...+.........|.+++.+|+|+|++++
T Consensus 169 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 248 (270)
T 3is3_A 169 GSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVG 248 (270)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999986431 11234445566789999999999999999
Q ss_pred HHhcCCCCCccccEEEeCCCcC
Q 024125 239 YLCLPAASYITGQIISVDGGFT 260 (272)
Q Consensus 239 ~l~~~~~~~~~G~~i~~dgG~~ 260 (272)
||+++.+.|+||++|.+|||+.
T Consensus 249 ~L~s~~~~~itG~~i~vdGG~~ 270 (270)
T 3is3_A 249 FLVSKEGEWVNGKVLTLDGGAA 270 (270)
T ss_dssp HHTSGGGTTCCSCEEEESTTCC
T ss_pred HHcCCccCCccCcEEEeCCCCC
Confidence 9999999999999999999973
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-50 Score=344.76 Aligned_cols=248 Identities=27% Similarity=0.387 Sum_probs=220.1
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
...++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++|.++++++++++.+
T Consensus 23 ~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 23 NHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp ----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHH
Confidence 335689999999999999999999999999999999999999888887766 45778899999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
++ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus 100 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~as 178 (277)
T 3gvc_A 100 AF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMS 178 (277)
T ss_dssp HH-SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHH
Confidence 99 69999999999988888899999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-H-HHHH---HHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-K-EFVD---KVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-~-~~~~---~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
|+|+++|+++++.|++++||+||+|+||+++|++....... + .... ......|.+++.+|+|+|++++||+++.+
T Consensus 179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a 258 (277)
T 3gvc_A 179 KAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDA 258 (277)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999998764331 1 1111 11113456788999999999999999999
Q ss_pred CCccccEEEeCCCcCCC
Q 024125 246 SYITGQIISVDGGFTAN 262 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~ 262 (272)
.++||++|.+|||++..
T Consensus 259 ~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 259 SMITGTTQIADGGTIAA 275 (277)
T ss_dssp TTCCSCEEEESTTGGGS
T ss_pred CCccCcEEEECCcchhc
Confidence 99999999999998875
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-50 Score=337.03 Aligned_cols=246 Identities=28% Similarity=0.340 Sum_probs=224.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++++|++|.++++++++++.+++
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 3588999999999999999999999999999999999999988887766 3467889999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|+||||||.....++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++||
T Consensus 81 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (259)
T 4e6p_A 81 -GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATK 159 (259)
T ss_dssp -SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHH
Confidence 6999999999998888889999999999999999999999999999998765 68999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh---------hCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL---------ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+++++|+++++.|++++||+||+|+||+++|++..... ...+.........|.+++.+|+|+|++++||++
T Consensus 160 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s 239 (259)
T 4e6p_A 160 AAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLAS 239 (259)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999876541 123444556677899999999999999999999
Q ss_pred CCCCCccccEEEeCCCcCCC
Q 024125 243 PAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~~ 262 (272)
+...++||++|++|||+.++
T Consensus 240 ~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 240 AESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp GGGTTCCSCEEEESTTSSCC
T ss_pred CccCCCCCCEEEECcChhcC
Confidence 99999999999999998763
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-50 Score=343.53 Aligned_cols=248 Identities=25% Similarity=0.335 Sum_probs=220.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC----------------hHHHHHHHHHHHhCCCeEEEEEecCC
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN----------------EVELNKCLKEWQSKGFVVSGSVCDAA 76 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~D~~ 76 (272)
.++++|++|||||++|||++++++|+++|++|++++|+ .+.+++..+++...+.++.++.+|++
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 35899999999999999999999999999999999887 77888888888777788999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCccEEEECCCCCCCC-CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecC
Q 024125 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISS 154 (272)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS 154 (272)
|.++++++++++.+++ +++|+||||||+.... ++.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||
T Consensus 87 ~~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 165 (286)
T 3uve_A 87 DYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS 165 (286)
T ss_dssp CHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHh-CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence 9999999999999999 6999999999986655 488899999999999999999999999999998765 689999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-----------hCHHHHH---HHHh
Q 024125 155 VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-----------ENKEFVD---KVIA 220 (272)
Q Consensus 155 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-----------~~~~~~~---~~~~ 220 (272)
..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|+|..... ..++... ....
T Consensus 166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (286)
T 3uve_A 166 VGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFH 245 (286)
T ss_dssp GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTC
T ss_pred hhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999974211 0111111 1233
Q ss_pred cCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 221 RTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 221 ~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..| +++.+|+|+|++++||+++.+.|+||++|++|||++++
T Consensus 246 ~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~ 286 (286)
T 3uve_A 246 TLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 286 (286)
T ss_dssp SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred ccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence 455 78899999999999999999999999999999998864
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-50 Score=335.14 Aligned_cols=246 Identities=30% Similarity=0.445 Sum_probs=230.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.+.+.++.++.+|++|.++++++++++.+++
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999999999999888888889999999999999999999999988
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|++||+
T Consensus 81 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (247)
T 3lyl_A 81 -LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA 159 (247)
T ss_dssp -CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence 6899999999998888888999999999999999999999999999998888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
|+++|+++++.|++++||+|++|+||+++|++.... .++.........|.+++.+|+|+|+++.+|+++...+++|++
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~ 237 (247)
T 3lyl_A 160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQT 237 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCE
Confidence 999999999999999999999999999999998765 234455566778999999999999999999999999999999
Q ss_pred EEeCCCcCC
Q 024125 253 ISVDGGFTA 261 (272)
Q Consensus 253 i~~dgG~~~ 261 (272)
|++|||+++
T Consensus 238 i~vdgG~~~ 246 (247)
T 3lyl_A 238 LHVNGGMYM 246 (247)
T ss_dssp EEESTTSSC
T ss_pred EEECCCEec
Confidence 999999876
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-50 Score=341.82 Aligned_cols=249 Identities=31% Similarity=0.428 Sum_probs=216.8
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++... +.++.++.+|++|.++++++++++.
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999 677778887777654 5688999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+++ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus 100 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 178 (281)
T 3v2h_A 100 DRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVA 178 (281)
T ss_dssp HHT-SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHH
Confidence 999 6999999999998888889999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH----------HHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE----------FVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
||+|+++|+++++.|++++||+||+|+||+++|++......... .........|.+++.+|+|+|++++|
T Consensus 179 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~ 258 (281)
T 3v2h_A 179 AKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALY 258 (281)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999765432210 11224456788999999999999999
Q ss_pred HhcCCCCCccccEEEeCCCcCC
Q 024125 240 LCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
|+++.+.++||++|++|||+++
T Consensus 259 L~s~~a~~itG~~i~vdGG~~~ 280 (281)
T 3v2h_A 259 LAGDDAAQITGTHVSMDGGWTA 280 (281)
T ss_dssp HHSSGGGGCCSCEEEESTTGGG
T ss_pred HcCCCcCCCCCcEEEECCCccC
Confidence 9999999999999999999875
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-49 Score=333.73 Aligned_cols=251 Identities=59% Similarity=0.934 Sum_probs=228.1
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.
T Consensus 4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999988888888776778899999999999999999999998
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+.++...|++||
T Consensus 84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (260)
T 2ae2_A 84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK 163 (260)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHH
Confidence 84589999999998877788889999999999999999999999999999988889999999999988889999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHH---HHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVD---KVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+++++|+++++.|++++||+||+|+||+++|++.......+.... ......|.+++.+|+|+|+.+.+|+++...++
T Consensus 164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~ 243 (260)
T 2ae2_A 164 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 243 (260)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCC
Confidence 999999999999999999999999999999999776543333222 45556788999999999999999999888999
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
+|+++.+|||+.+.
T Consensus 244 tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 244 TGQIIYVDGGLMAN 257 (260)
T ss_dssp CSCEEEESTTGGGC
T ss_pred CCCEEEECCCcccc
Confidence 99999999998764
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=337.33 Aligned_cols=254 Identities=35% Similarity=0.587 Sum_probs=226.5
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH-HhCCCeEEEEEecCCCHHHHHHHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW-QSKGFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
.+.+..++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ ...+.++..+.+|++|.++++++++
T Consensus 12 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 91 (267)
T 1vl8_A 12 HMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 91 (267)
T ss_dssp -----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 345667789999999999999999999999999999999999999888887777 4446678889999999999999999
Q ss_pred HHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC-CCCCCCCCh
Q 024125 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG-GLSHVGSGS 165 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~-~~~~~~~~~ 165 (272)
++.+++ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.++||++||.. +..+.++..
T Consensus 92 ~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~ 170 (267)
T 1vl8_A 92 AVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNIS 170 (267)
T ss_dssp HHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCH
T ss_pred HHHHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCCh
Confidence 999999 689999999999877788889999999999999999999999999999888789999999998 888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
.|++||+++++|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+|+.+++|+++..
T Consensus 171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~ 250 (267)
T 1vl8_A 171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEA 250 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccc
Confidence 99999999999999999999999999999999999999977654334444555566788999999999999999999888
Q ss_pred CCccccEEEeCCCcCCC
Q 024125 246 SYITGQIISVDGGFTAN 262 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~ 262 (272)
.+++|++|.+|||++++
T Consensus 251 ~~itG~~i~vdGG~~~~ 267 (267)
T 1vl8_A 251 KYVTGQIIFVDGGWTAN 267 (267)
T ss_dssp TTCCSCEEEESTTGGGC
T ss_pred cCCcCCeEEECCCCCCC
Confidence 99999999999998753
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=344.20 Aligned_cols=245 Identities=29% Similarity=0.366 Sum_probs=225.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++||++|||||++|||++++++|+++|++|++++|+.+..++..+++...+.++..+.+|++|.++++++++++.+.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~- 107 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI- 107 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 5689999999999999999999999999999999999999999998888888888999999999999999999999876
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.+....|++||+
T Consensus 108 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 186 (275)
T 4imr_A 108 -APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKA 186 (275)
T ss_dssp -SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHH
Confidence 6899999999998888888999999999999999999999999999999888899999999999988888889999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcC-CCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIART-PLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+++|+++++.|++++||+||+|+||+++|++...... .++......... |.+++.+|+|+|++++||+++.+.++||
T Consensus 187 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG 266 (275)
T 4imr_A 187 AQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTG 266 (275)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCC
Confidence 99999999999999999999999999999999865432 334444444444 8999999999999999999999999999
Q ss_pred cEEEeCCCc
Q 024125 251 QIISVDGGF 259 (272)
Q Consensus 251 ~~i~~dgG~ 259 (272)
++|.+|||+
T Consensus 267 ~~i~vdGG~ 275 (275)
T 4imr_A 267 ETIFLTGGY 275 (275)
T ss_dssp CEEEESSCC
T ss_pred CEEEeCCCC
Confidence 999999995
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=343.06 Aligned_cols=250 Identities=28% Similarity=0.411 Sum_probs=219.6
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-------------ChHHHHHHHHHHHhCCCeEEEEEecCC
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-------------NEVELNKCLKEWQSKGFVVSGSVCDAA 76 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~ 76 (272)
....+++||++|||||++|||++++++|+++|++|++++| +.+++++..+++...+.++.++.+|++
T Consensus 8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 87 (280)
T 3pgx_A 8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR 87 (280)
T ss_dssp ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence 3445789999999999999999999999999999999998 778888888888887888999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCC
Q 024125 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSV 155 (272)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~ 155 (272)
|.++++++++++.+++ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||.
T Consensus 88 ~~~~v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (280)
T 3pgx_A 88 DDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSS 166 (280)
T ss_dssp CHHHHHHHHHHHHHHH-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcch
Confidence 9999999999999999 6999999999998888889999999999999999999999999999998765 6899999999
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh------CHHHHHH--HHhcCCCCCC
Q 024125 156 GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE------NKEFVDK--VIARTPLQRV 227 (272)
Q Consensus 156 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~------~~~~~~~--~~~~~~~~~~ 227 (272)
.+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++...... .+..... .....|. ++
T Consensus 167 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~ 245 (280)
T 3pgx_A 167 AGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GF 245 (280)
T ss_dssp GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SC
T ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CC
Confidence 9999999999999999999999999999999999999999999999998643110 0000000 0112234 57
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
.+|+|+|++++||+++...++||++|.+|||+++
T Consensus 246 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 279 (280)
T 3pgx_A 246 MTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK 279 (280)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred CCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 8999999999999999999999999999999864
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=341.74 Aligned_cols=247 Identities=25% Similarity=0.368 Sum_probs=220.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhCCCeEEEEEecCCCHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------------EVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 81 (272)
+++||++|||||++|||++++++|+++|++|++++|+ .+.+++..+++...+.++.++.+|++|.+++
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 5889999999999999999999999999999999887 7788888888888888999999999999999
Q ss_pred HHHHHHHHHHcCCCccEEEECCCCCCCCC-CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCC
Q 024125 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKP-TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS 159 (272)
Q Consensus 82 ~~~~~~~~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~ 159 (272)
+++++++.+.+ +++|+||||||+..... +.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..
T Consensus 105 ~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~ 183 (299)
T 3t7c_A 105 QAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR 183 (299)
T ss_dssp HHHHHHHHHHH-SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 99999999999 79999999999876654 88899999999999999999999999999987764 68999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-----------CHH---HHHHHHhcCCCC
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-----------NKE---FVDKVIARTPLQ 225 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-----------~~~---~~~~~~~~~~~~ 225 (272)
+.++...|++||+|+++|+++++.|++++||+||+|+||+++|+|...... ... .........| +
T Consensus 184 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 262 (299)
T 3t7c_A 184 GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-I 262 (299)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-C
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-c
Confidence 999999999999999999999999999999999999999999999643110 001 1112334455 7
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 226 RVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 226 ~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++.+|+|+|++++||+++.+.|+||++|.+|||++++
T Consensus 263 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l~ 299 (299)
T 3t7c_A 263 PYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK 299 (299)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence 8899999999999999999999999999999998864
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-50 Score=340.98 Aligned_cols=246 Identities=27% Similarity=0.378 Sum_probs=219.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-------------ChHHHHHHHHHHHhCCCeEEEEEecCCCHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-------------NEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 80 (272)
++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.+|++|.++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 589999999999999999999999999999999998 6788888888888778889999999999999
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCC
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS 159 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~ 159 (272)
++++++++.+++ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||..+..
T Consensus 88 v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 166 (277)
T 3tsc_A 88 LRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK 166 (277)
T ss_dssp HHHHHHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence 999999999999 7999999999998888888999999999999999999999999999998765 68999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHhcCCCCCCCCH
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIARTPLQRVGEP 230 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 230 (272)
+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++...... .++.........|. ++.+|
T Consensus 167 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~p 245 (277)
T 3tsc_A 167 MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVAEP 245 (277)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCBCH
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCCCH
Confidence 999999999999999999999999999999999999999999999653211 01111111122343 68899
Q ss_pred HHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 231 EEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 231 ~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
+|+|++++||+++.+.++||++|.+|||+++
T Consensus 246 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 276 (277)
T 3tsc_A 246 EDIADTVCWLASDESRKVTAAQIPVDQGSTQ 276 (277)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence 9999999999999999999999999999864
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-49 Score=337.13 Aligned_cols=251 Identities=29% Similarity=0.455 Sum_probs=223.3
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+.+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|.++++++++++
T Consensus 7 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 86 (267)
T 1iy8_A 7 PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT 86 (267)
T ss_dssp ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 445689999999999999999999999999999999999999888888777654 567888999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 89 GSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
.+++ +++|+||||||.... .++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++...|
T Consensus 87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 165 (267)
T 1iy8_A 87 TERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGY 165 (267)
T ss_dssp HHHH-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHH
T ss_pred HHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccH
Confidence 9999 699999999998765 67888899999999999999999999999999988777999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhh--hhCHH----HHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERL--LENKE----FVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
++||+++++|+++++.|++++||+||+|+||+++|++.... ...++ .........|.+++.+|+|+|+.+++|+
T Consensus 166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~ 245 (267)
T 1iy8_A 166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL 245 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999997653 11111 1124555678899999999999999999
Q ss_pred cCCCCCccccEEEeCCCcCCC
Q 024125 242 LPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++...+++|++|.+|||+++.
T Consensus 246 s~~~~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 246 SDDASYVNATVVPIDGGQSAA 266 (267)
T ss_dssp SGGGTTCCSCEEEESTTTTTB
T ss_pred CccccCCCCCEEEECCCcccC
Confidence 988899999999999998764
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=338.02 Aligned_cols=246 Identities=30% Similarity=0.412 Sum_probs=219.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++... +..+..+.+|+++.+++++++++
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~--- 82 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK--- 82 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH---
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh---
Confidence 5689999999999999999999999999999999999999999888888765 45788899999999998877654
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus 83 -~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 160 (267)
T 3t4x_A 83 -Y-PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSAT 160 (267)
T ss_dssp -C-CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred -c-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHH
Confidence 5 68999999999988888889999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---------HHHHH----HHHhcCCCCCCCCHHHHHHHH
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---------KEFVD----KVIARTPLQRVGEPEEVASLV 237 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~~~----~~~~~~~~~~~~~~~e~a~~~ 237 (272)
|+|+++|+++++.|++++||+||+|+||+++|++....... .+... ......|.+++.+|+|+|+++
T Consensus 161 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v 240 (267)
T 3t4x_A 161 KTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLV 240 (267)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHH
Confidence 99999999999999999999999999999999987654221 11111 122335789999999999999
Q ss_pred HHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 238 AYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
+||+++.+.++||++|.+|||++.+.
T Consensus 241 ~fL~s~~~~~itG~~i~vdGG~~~si 266 (267)
T 3t4x_A 241 TFLSSPLSSAINGSALRIDGGLVRSV 266 (267)
T ss_dssp HHHHSGGGTTCCSCEEEESTTCSCSC
T ss_pred HHHcCccccCccCCeEEECCCccccc
Confidence 99999999999999999999998764
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-50 Score=342.81 Aligned_cols=248 Identities=25% Similarity=0.360 Sum_probs=202.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++++|++|.++++++++++.++
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999985 788888888888887888999999999999999999999999
Q ss_pred cCCCccEEEECCCC--CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCeEEEecCCCCCCCCCCChh
Q 024125 92 FNGKLNILVNNVGT--NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 92 ~~~~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~ii~vsS~~~~~~~~~~~~ 166 (272)
+ +++|+||||||+ ....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..+..+.++...
T Consensus 105 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~ 183 (280)
T 4da9_A 105 F-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLD 183 (280)
T ss_dssp H-SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHH
T ss_pred c-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccH
Confidence 9 699999999998 4567888999999999999999999999999999998755 689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHh-cCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIA-RTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
|++||+|+++|+++++.|++++||+||+|+||+++|++...... +....... ..|.+++.+|+|+|++++||+++.+
T Consensus 184 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 261 (280)
T 4da9_A 184 YCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG--KYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQF 261 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CCBCHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch--hHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999999999999999865532 22222333 5788999999999999999999999
Q ss_pred CCccccEEEeCCCcCCCC
Q 024125 246 SYITGQIISVDGGFTANG 263 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~~ 263 (272)
.++||++|++|||++++.
T Consensus 262 ~~itG~~i~vdGG~~~~~ 279 (280)
T 4da9_A 262 GFATGSVIQADGGLSIGR 279 (280)
T ss_dssp GGGTTCEEEESTTCC---
T ss_pred cCCCCCEEEECCCcccCC
Confidence 999999999999998764
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=335.44 Aligned_cols=245 Identities=32% Similarity=0.419 Sum_probs=221.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++||++|||||++|||++++++|+++|++|++++|+++.++++.+++ +.++.++.+|++|.++++++++++.+.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL- 80 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh-
Confidence 588999999999999999999999999999999999999888887766 3478889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++ .|+||++||..+..+.++...|++||+|
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa 158 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAA 158 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHH
Confidence 79999999999988888999999999999999999999999999999866 3799999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
+++|+++++.|++++||+||+|+||+++|++....... ...........|.+++.+|+|+|++++||+++ +.++|
T Consensus 159 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~it 237 (255)
T 4eso_A 159 LVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTT 237 (255)
T ss_dssp HHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTCC
T ss_pred HHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCcc
Confidence 99999999999999999999999999999986432111 12333445668999999999999999999998 89999
Q ss_pred ccEEEeCCCcCCCCCC
Q 024125 250 GQIISVDGGFTANGFN 265 (272)
Q Consensus 250 G~~i~~dgG~~~~~~~ 265 (272)
|++|.+|||+..+...
T Consensus 238 G~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 238 GAKLAVDGGLGQKLST 253 (255)
T ss_dssp SCEEEESTTTTTTBCC
T ss_pred CCEEEECCCccccCcC
Confidence 9999999999887544
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-49 Score=333.69 Aligned_cols=250 Identities=27% Similarity=0.425 Sum_probs=226.1
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
.+..+.++|++|||||++|||++++++|+++|++|++++ |+.++.++..+++...+.++.++.+|++|.++++++++++
T Consensus 6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (256)
T 3ezl_A 6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV 85 (256)
T ss_dssp -------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence 345668899999999999999999999999999999887 6777777777787777788999999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
.+++ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+.++...|+
T Consensus 86 ~~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 164 (256)
T 3ezl_A 86 KAEV-GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYS 164 (256)
T ss_dssp HHHT-CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHH
T ss_pred HHhc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccH
Confidence 9999 699999999999888888999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+|+++|+++++.|++++||+|++++||+++|++.... .++.........|.+++.+|+|+|+++.||+++...++
T Consensus 165 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~ 242 (256)
T 3ezl_A 165 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFS 242 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCC
Confidence 9999999999999999999999999999999999998765 34566677778899999999999999999999999999
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
+|++|++|||++++
T Consensus 243 tG~~i~vdgG~~~~ 256 (256)
T 3ezl_A 243 TGADFSLNGGLHMG 256 (256)
T ss_dssp CSCEEEESTTSCC-
T ss_pred cCcEEEECCCEeCc
Confidence 99999999999863
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-49 Score=335.58 Aligned_cols=243 Identities=30% Similarity=0.421 Sum_probs=221.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.++++++++++.+++
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999999998888887766 4567888999999999999999999999
Q ss_pred CCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 93 NGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 93 ~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus 84 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 162 (271)
T 3tzq_B 84 -GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACT 162 (271)
T ss_dssp -SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHH
Confidence 69999999999862 456678899999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+++|+++++.|++++||+||+|+||+++|++..... ..+.........|.+++.+|+|+|++++||+++...++||
T Consensus 163 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG 241 (271)
T 3tzq_B 163 KAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITG 241 (271)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCC
Confidence 999999999999999999999999999999999976322 3455666777889999999999999999999999999999
Q ss_pred cEEEeCCCcC
Q 024125 251 QIISVDGGFT 260 (272)
Q Consensus 251 ~~i~~dgG~~ 260 (272)
++|.+|||+.
T Consensus 242 ~~i~vdGG~~ 251 (271)
T 3tzq_B 242 QVIAADSGLL 251 (271)
T ss_dssp CEEEESTTTT
T ss_pred CEEEECCCcc
Confidence 9999999943
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=334.23 Aligned_cols=249 Identities=29% Similarity=0.432 Sum_probs=208.9
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
..|++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++.+|++|.++++++++++.+
T Consensus 3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (261)
T 3n74_A 3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALS 79 (261)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999988887765 45788899999999999999999999
Q ss_pred HcCCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC----CCeEEEecCCCCCCCCCCCh
Q 024125 91 KFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG----VGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~g~ii~vsS~~~~~~~~~~~ 165 (272)
++ +++|++|||||... ..++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..+.++..
T Consensus 80 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~ 158 (261)
T 3n74_A 80 KF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLA 158 (261)
T ss_dssp HH-SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCH
T ss_pred hc-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCcc
Confidence 99 69999999999865 56777889999999999999999999999999998753 57899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
.|++||+|+++|+++++.|++++||+|++|+||+++|++...+.. ..+....+....|.+++.+|+|+|+++.||+++
T Consensus 159 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 238 (261)
T 3n74_A 159 WYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSP 238 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999876542 233445556678899999999999999999999
Q ss_pred CCCCccccEEEeCCCcCCCC
Q 024125 244 AASYITGQIISVDGGFTANG 263 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~~~ 263 (272)
...++||++|++|||+++++
T Consensus 239 ~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 239 QASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp GGTTCCSCEEEESTTTTC--
T ss_pred cccCcCCcEEEecCCcccCC
Confidence 99999999999999999875
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-50 Score=338.19 Aligned_cols=245 Identities=26% Similarity=0.372 Sum_probs=214.0
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.|.+++|++|||||++|||++++++|+++|++|+++ .|+.+..+++.+++...+.++.++.+|++|.++++++++++.+
T Consensus 22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999887 5677778888888888788899999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.+ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++ .|+||++||..+..+.++...|++|
T Consensus 102 ~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as 178 (267)
T 3u5t_A 102 AF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAA 178 (267)
T ss_dssp HH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHH
Confidence 99 69999999999988888999999999999999999999999999999965 3899999999998888999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+++|+++++.|++++||+||+|+||+++|++...... .+.........|.+++.+|+|+|+++.||+++.+.++||
T Consensus 179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG 257 (267)
T 3u5t_A 179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS-DEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNG 257 (267)
T ss_dssp HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCS
T ss_pred HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence 9999999999999999999999999999999999755322 334555667789999999999999999999999999999
Q ss_pred cEEEeCCCcC
Q 024125 251 QIISVDGGFT 260 (272)
Q Consensus 251 ~~i~~dgG~~ 260 (272)
++|.+|||+.
T Consensus 258 ~~i~vdGG~~ 267 (267)
T 3u5t_A 258 QVLRANGGII 267 (267)
T ss_dssp EEEEESSSCC
T ss_pred CEEEeCCCcC
Confidence 9999999973
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=337.60 Aligned_cols=253 Identities=31% Similarity=0.445 Sum_probs=221.0
Q ss_pred ccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHH
Q 024125 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKL 84 (272)
Q Consensus 6 ~~~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 84 (272)
..+....|++++|++|||||++|||++++++|+++|++|++++| +.+..+.+.+++...+.++.++.+|++|.++++++
T Consensus 18 ~~~~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 97 (271)
T 4iin_A 18 LYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEA 97 (271)
T ss_dssp ------CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred ehhhhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 34556778899999999999999999999999999999999999 56666777777777788899999999999999999
Q ss_pred HHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC
Q 024125 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (272)
Q Consensus 85 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~ 164 (272)
++++.+.+ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++.
T Consensus 98 ~~~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 176 (271)
T 4iin_A 98 IQTIVQSD-GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQ 176 (271)
T ss_dssp HHHHHHHH-SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC
T ss_pred HHHHHHhc-CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCc
Confidence 99999998 69999999999988888888999999999999999999999999999998888999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
..|++||+|++.|+++++.|++++||+|++|+||+++|++...... +.........|.+++.+|+|+|+++.+|+++.
T Consensus 177 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~ 254 (271)
T 4iin_A 177 TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD--ELKADYVKNIPLNRLGSAKEVAEAVAFLLSDH 254 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH--HHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999876532 33444566788999999999999999999999
Q ss_pred CCCccccEEEeCCCcCC
Q 024125 245 ASYITGQIISVDGGFTA 261 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~ 261 (272)
..+++|++|++|||+++
T Consensus 255 ~~~itG~~i~vdGG~~~ 271 (271)
T 4iin_A 255 SSYITGETLKVNGGLYM 271 (271)
T ss_dssp GTTCCSCEEEESTTSCC
T ss_pred cCCCcCCEEEeCCCeeC
Confidence 99999999999999875
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=330.28 Aligned_cols=249 Identities=30% Similarity=0.451 Sum_probs=224.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|.++++++++++.+.
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999888888777654 567888999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++||
T Consensus 83 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 161 (263)
T 3ai3_A 83 F-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTK 161 (263)
T ss_dssp H-SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHH
Confidence 9 689999999998877888899999999999999999999999999999887779999999999999888999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHhc-CCCCCCCCHHHHHHHHHHHh
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIAR-TPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~e~a~~~~~l~ 241 (272)
++++.|+++++.|++++||+||+|+||+++|++...... .++........ .|.+++.+|+|+|+++++|+
T Consensus 162 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~ 241 (263)
T 3ai3_A 162 AALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC 241 (263)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence 999999999999999999999999999999999765422 12233334444 78889999999999999999
Q ss_pred cCCCCCccccEEEeCCCcCCC
Q 024125 242 LPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++...+++|+++.+|||+.+.
T Consensus 242 s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 242 SERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp STTCTTCCSCEEEESTTCCCC
T ss_pred CccccCCCCcEEEECCCcccc
Confidence 988899999999999998754
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-49 Score=330.88 Aligned_cols=246 Identities=29% Similarity=0.368 Sum_probs=222.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH--HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE--LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++|++|||||++|||++++++|+++|++|++++|+.+. +++..+++...+.++.++.+|++|.++++++++++.+++
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 79 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL- 79 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 37999999999999999999999999999999999887 777777777666788899999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||.....++.+.+.++|++++++|+.++++++++++|+|++++. ++||++||..+..+.++...|++||+
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKF 159 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHH
Confidence 68999999999877778888999999999999999999999999999988776 89999999999999899999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-------hC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-------EN--KEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
++++|+++++.|++++||+||+|+||+++|++..... .. .+.........|.+++.+|+|+|+++.||+++
T Consensus 160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~ 239 (258)
T 3a28_C 160 AVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASE 239 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999999976532 11 23344455667889999999999999999999
Q ss_pred CCCCccccEEEeCCCcCCC
Q 024125 244 AASYITGQIISVDGGFTAN 262 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~~ 262 (272)
...+++|++|.+|||++++
T Consensus 240 ~~~~~tG~~i~vdGG~~~~ 258 (258)
T 3a28_C 240 NSNYVTGQVMLVDGGMLYN 258 (258)
T ss_dssp GGTTCCSCEEEESSSSCCC
T ss_pred ccCCCCCCEEEECCCEecC
Confidence 8999999999999998753
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=341.37 Aligned_cols=251 Identities=20% Similarity=0.258 Sum_probs=223.9
Q ss_pred CCCCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+.+++++|++|||||+| |||++++++|+++|++|++++|+.+..+...+.....+ .+.++.+|++|.++++++++++
T Consensus 24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~ 102 (296)
T 3k31_A 24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKVL 102 (296)
T ss_dssp CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHHH
T ss_pred chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHH
Confidence 34678999999999997 99999999999999999999999765555444443333 4678899999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC
Q 024125 89 GSKFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~ 164 (272)
.+++ +++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|+|++ .|+||++||..+..+.++.
T Consensus 103 ~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~ 179 (296)
T 3k31_A 103 AEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHY 179 (296)
T ss_dssp HHHH-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTT
T ss_pred HHHc-CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCc
Confidence 9999 699999999998654 67888999999999999999999999999999966 5899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
..|++||+|+++|+++++.|++++||+||+|+||+++|++..................|.+++.+|+|+|++++||+++.
T Consensus 180 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~ 259 (296)
T 3k31_A 180 NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDL 259 (296)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999997655433445566677789999999999999999999999
Q ss_pred CCCccccEEEeCCCcCCCCCC
Q 024125 245 ASYITGQIISVDGGFTANGFN 265 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~~~~ 265 (272)
+.++||++|.+|||+++.+++
T Consensus 260 a~~itG~~i~vdGG~~~~~~~ 280 (296)
T 3k31_A 260 GRGTTGETVHVDCGYHVVGMK 280 (296)
T ss_dssp GTTCCSCEEEESTTGGGCSSC
T ss_pred cCCccCCEEEECCCccccCCc
Confidence 999999999999999998775
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-50 Score=340.07 Aligned_cols=251 Identities=24% Similarity=0.308 Sum_probs=212.9
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC---ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR---NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
..+++++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++...+.++.++.+|++|.+++++++++
T Consensus 5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 446799999999999999999999999999999999866 45667778888887788999999999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+.+++ +++|++|||||+....++.+.+.++|++++++|+.+++.++++++|+|++ .|+||++||..+..+.++...|
T Consensus 85 ~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~Y 161 (262)
T 3ksu_A 85 AEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAYTGFYSTY 161 (262)
T ss_dssp HHHHH-CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHHHCCCCC-
T ss_pred HHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccCCCCCchh
Confidence 99999 79999999999988888899999999999999999999999999999943 4899999999988888889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+++|+++++.|++++||+||+|+||+++|++...... ++.........|.+++.+|+|+|++++||+++ ..+
T Consensus 162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~ 239 (262)
T 3ksu_A 162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET-KESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWW 239 (262)
T ss_dssp ----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------CCCCSCCGGGTHHHHHHHHTT-TTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc-hHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCC
Confidence 9999999999999999999999999999999999999865432 23344455667889999999999999999999 899
Q ss_pred ccccEEEeCCCcCCCCCCC
Q 024125 248 ITGQIISVDGGFTANGFNP 266 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~~~~ 266 (272)
+||++|.+|||+++...++
T Consensus 240 itG~~i~vdGg~~~~~~~~ 258 (262)
T 3ksu_A 240 INGQTIFANGGYTTREGHH 258 (262)
T ss_dssp CCSCEEEESTTCCCC----
T ss_pred ccCCEEEECCCccCCCccc
Confidence 9999999999998876553
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-49 Score=334.86 Aligned_cols=244 Identities=30% Similarity=0.387 Sum_probs=220.5
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+.+++++|++|||||++|||++++++|+++|++|+++++ +.+..++..+++...+.++.++.+|++|.++++++++++.
T Consensus 25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETV 104 (271)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999855 4677788888888778889999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-CCCChhhH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-VGSGSIYG 168 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-~~~~~~Y~ 168 (272)
+++ +++|++|||||+....++.+.+.++|++.+++|+.+++.++++++|+|++ .|+||++||..+... .++...|+
T Consensus 105 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~ 181 (271)
T 3v2g_A 105 EAL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYS 181 (271)
T ss_dssp HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHH
T ss_pred HHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHH
Confidence 999 69999999999988888999999999999999999999999999999965 489999999776654 68889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+|+++|+++++.|++++||+||+|+||+++|++.... ++.........|.+++.+|+|+|+++.||+++...++
T Consensus 182 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~i 258 (271)
T 3v2g_A 182 ASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD---GDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFV 258 (271)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS---CSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc---chhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCc
Confidence 9999999999999999999999999999999999997543 2234455667899999999999999999999999999
Q ss_pred cccEEEeCCCcC
Q 024125 249 TGQIISVDGGFT 260 (272)
Q Consensus 249 ~G~~i~~dgG~~ 260 (272)
||++|.+|||++
T Consensus 259 tG~~i~vdGG~~ 270 (271)
T 3v2g_A 259 TGASLTIDGGAN 270 (271)
T ss_dssp CSCEEEESTTTT
T ss_pred cCCEEEeCcCcc
Confidence 999999999986
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=335.92 Aligned_cols=247 Identities=27% Similarity=0.359 Sum_probs=208.7
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.+++++|++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...+.++.++.+|++|.++++++++++.+
T Consensus 3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999988 6777778888888887777889999999999999999999999
Q ss_pred HcCCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhH
Q 024125 91 KFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYG 168 (272)
Q Consensus 91 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~ 168 (272)
++ +++|++|||||.. ...++.+.+.++|++++++|+.++++++++++|+|++ .|+||++||..+. .+.++...|+
T Consensus 83 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~ 159 (259)
T 3edm_A 83 KF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYA 159 (259)
T ss_dssp HH-CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHH
T ss_pred Hh-CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHH
Confidence 99 7999999999986 6678889999999999999999999999999999976 4899999999887 6788899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+|+++|+++++.|+++. |+||+|+||+++|++...... ++.........|.+++.+|+|+++++.||+++...++
T Consensus 160 asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~i 237 (259)
T 3edm_A 160 TSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTK-PEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYV 237 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence 99999999999999999887 999999999999999876543 3444555667889999999999999999999999999
Q ss_pred cccEEEeCCCcCCCC
Q 024125 249 TGQIISVDGGFTANG 263 (272)
Q Consensus 249 ~G~~i~~dgG~~~~~ 263 (272)
||++|++|||++...
T Consensus 238 tG~~i~vdGg~~~~~ 252 (259)
T 3edm_A 238 TGACYDINGGVLFSE 252 (259)
T ss_dssp CSCEEEESBCSSBC-
T ss_pred cCCEEEECCCcCCCC
Confidence 999999999988763
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-49 Score=341.64 Aligned_cols=248 Identities=27% Similarity=0.306 Sum_probs=221.5
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC--hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN--EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.++++||++|||||++|||++++++|+++|++|++++|+ .+..++..+++...+.++.++.+|++|.++++++++++.
T Consensus 44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999887 345666666777777889999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 90 SKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+++ +++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|++ .|+||++||..+..+.++...|+
T Consensus 124 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~ 200 (294)
T 3r3s_A 124 EAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYA 200 (294)
T ss_dssp HHH-TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHH
T ss_pred HHc-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHH
Confidence 999 69999999999854 567888999999999999999999999999999855 38999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+|+++|+++++.|++++||+||+|+||+++|++........+.........|.+++.+|+|+|++++||+++...++
T Consensus 201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~i 280 (294)
T 3r3s_A 201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV 280 (294)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999954432233334445566889999999999999999999999999
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
||++|++|||++++
T Consensus 281 tG~~i~vdGG~~l~ 294 (294)
T 3r3s_A 281 TAEVHGVCGGEHLG 294 (294)
T ss_dssp CSCEEEESTTCCCC
T ss_pred CCCEEEECCCccCc
Confidence 99999999999874
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=328.63 Aligned_cols=245 Identities=27% Similarity=0.337 Sum_probs=222.2
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i 80 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF 80 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence 6899999999999999999999999999999999998888888887766788899999999999999999999998 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
|+||||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..+.++...|++||++++
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 160 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 160 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence 9999999987777888899999999999999999999999999998766 689999999999988899999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
+|+++++.|++++||+||+|+||+++|++...... ..+....+....|.+++.+|+|+|+++.+|+++...
T Consensus 161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~ 240 (256)
T 1geg_A 161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 240 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999765421 223334455567888999999999999999998889
Q ss_pred CccccEEEeCCCcCCC
Q 024125 247 YITGQIISVDGGFTAN 262 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~ 262 (272)
+++|+++.+|||++++
T Consensus 241 ~~tG~~i~vdGG~~~~ 256 (256)
T 1geg_A 241 YMTGQSLLIDGGMVFN 256 (256)
T ss_dssp TCCSCEEEESSSSSCC
T ss_pred CCCCCEEEeCCCccCC
Confidence 9999999999998753
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-49 Score=332.80 Aligned_cols=244 Identities=27% Similarity=0.460 Sum_probs=222.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF- 82 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 4789999999999999999999999999999999999999888888887767788899999999999999999999999
Q ss_pred CCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||+
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 162 (262)
T 1zem_A 83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG 162 (262)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHH
Confidence 6899999999986 667788899999999999999999999999999998877799999999998888889999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhh------------hh-CHH-HHHHHHhcCCCCCCCCHHHHHHHHH
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERL------------LE-NKE-FVDKVIARTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~~e~a~~~~ 238 (272)
++++|+++++.|++++||+||+|+||+++|++.... .. .++ .........|.+++.+|+|+|+++.
T Consensus 163 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 242 (262)
T 1zem_A 163 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 242 (262)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999997653 11 233 3344556678999999999999999
Q ss_pred HHhcCCCCCccccEEEeCCC
Q 024125 239 YLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 239 ~l~~~~~~~~~G~~i~~dgG 258 (272)
||+++...++||++|.+|||
T Consensus 243 ~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 243 FLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp HHHSGGGTTCCSCEEEESCC
T ss_pred HHcCchhcCcCCcEEecCCC
Confidence 99999899999999999998
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-49 Score=329.92 Aligned_cols=242 Identities=25% Similarity=0.325 Sum_probs=215.4
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecC--CCHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDA--ASPDQREKLIQ 86 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~--~~~~~~~~~~~ 86 (272)
+....+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|+ +|.++++++++
T Consensus 5 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 5 PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp CCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHH
Confidence 3455789999999999999999999999999999999999999999888888654 33778889999 99999999999
Q ss_pred HHHHHcCCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh
Q 024125 87 EVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~ 165 (272)
++.+.+ +++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++..
T Consensus 85 ~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~ 163 (252)
T 3f1l_A 85 RIAVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG 163 (252)
T ss_dssp HHHHHC-SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCH
T ss_pred HHHHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCc
Confidence 999999 6999999999984 45688899999999999999999999999999999998889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
.|++||+|+++|+++++.|+++. |+||+|+||+++|++....... .+..++.+|+|+++.++||+++.+
T Consensus 164 ~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~dva~~~~~L~s~~~ 232 (252)
T 3f1l_A 164 AYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT----------EDPQKLKTPADIMPLYLWLMGDDS 232 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT----------CCGGGSBCTGGGHHHHHHHHSGGG
T ss_pred hhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc----------cchhccCCHHHHHHHHHHHcCccc
Confidence 99999999999999999999887 9999999999999997654321 223456799999999999999999
Q ss_pred CCccccEEEeCCCcCCCC
Q 024125 246 SYITGQIISVDGGFTANG 263 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~~ 263 (272)
.++||++|.+|||+..+.
T Consensus 233 ~~itG~~i~vdgG~~~~~ 250 (252)
T 3f1l_A 233 RRKTGMTFDAQPGRKPGI 250 (252)
T ss_dssp TTCCSCEEESSCC-----
T ss_pred cCCCCCEEEeCCCcCCCC
Confidence 999999999999987653
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=332.56 Aligned_cols=248 Identities=33% Similarity=0.509 Sum_probs=222.7
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+.|++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.+|++|.++++++++++.
T Consensus 22 ~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 22 HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALG 100 (276)
T ss_dssp CTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999998888888776544 78888999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC----CeEEEecCCCCCCCCCCCh
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV----GSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----g~ii~vsS~~~~~~~~~~~ 165 (272)
+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++. ++||++||..+..+.++..
T Consensus 101 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~ 179 (276)
T 2b4q_A 101 ELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQA 179 (276)
T ss_dssp HHC-SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSC
T ss_pred Hhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCc
Confidence 998 68999999999887788888999999999999999999999999999987665 8999999999988888887
Q ss_pred -hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHh--cCCCCCCCCHHHHHHHHHHHhc
Q 024125 166 -IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIA--RTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 166 -~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
.|++||++++.|+++++.|++++||+||+|+||+++|++....... ....... ..|.+++.+|+|+|+++++|++
T Consensus 180 ~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s 257 (276)
T 2b4q_A 180 YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND--PQALEADSASIPMGRWGRPEEMAALAISLAG 257 (276)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC--HHHHHHHHHTSTTSSCCCHHHHHHHHHHHHS
T ss_pred cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh--HHHHHHhhcCCCCCCcCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999997654332 2223333 5788899999999999999999
Q ss_pred CCCCCccccEEEeCCCcCC
Q 024125 243 PAASYITGQIISVDGGFTA 261 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~ 261 (272)
+...+++|++|.+|||+++
T Consensus 258 ~~~~~~tG~~i~vdGG~~L 276 (276)
T 2b4q_A 258 TAGAYMTGNVIPIDGGFHL 276 (276)
T ss_dssp GGGTTCCSCEEEESTTTTC
T ss_pred ccccCCCCCEEEeCCCccC
Confidence 8889999999999999864
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-49 Score=337.99 Aligned_cols=247 Identities=31% Similarity=0.396 Sum_probs=222.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++||++|||||++|||++++++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|.++++++++++.++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999998764 44555556666778999999999999999999999999
Q ss_pred cCCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||..+..+.++...|++|
T Consensus 123 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as 199 (291)
T 3ijr_A 123 L-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSAT 199 (291)
T ss_dssp H-SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHH
T ss_pred c-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHH
Confidence 9 79999999999854 457788899999999999999999999999999854 4799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+++|+++++.|++++||+||+|+||+++|++...... .+....+....|.+++.+|+|+|++++||+++...++||
T Consensus 200 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG 278 (291)
T 3ijr_A 200 KGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD-EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTG 278 (291)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC-HHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC-HHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcC
Confidence 9999999999999999999999999999999999765432 444555667789999999999999999999999999999
Q ss_pred cEEEeCCCcCCCC
Q 024125 251 QIISVDGGFTANG 263 (272)
Q Consensus 251 ~~i~~dgG~~~~~ 263 (272)
++|.+|||++++|
T Consensus 279 ~~i~vdGG~~~~g 291 (291)
T 3ijr_A 279 QMIHVNGGVIVNG 291 (291)
T ss_dssp CEEEESSSCCCCC
T ss_pred CEEEECCCcccCC
Confidence 9999999999875
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-49 Score=336.88 Aligned_cols=249 Identities=20% Similarity=0.263 Sum_probs=216.5
Q ss_pred CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.++++|++|||||+ +|||++++++|+++|++|++++|+++..+... ++.....++.++.+|++|.++++++++++.+
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVE-PLAEELGAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHH-HHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence 46899999999999 55999999999999999999999965444333 3333334678899999999999999999999
Q ss_pred HcCCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 91 KFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
++ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++ .|+||++||..+..+.++...
T Consensus 106 ~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~ 182 (293)
T 3grk_A 106 KW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNV 182 (293)
T ss_dssp HT-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTH
T ss_pred hc-CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHH
Confidence 99 69999999999865 567888999999999999999999999999999975 589999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|++||+|+++|+++++.|++++||+||+|+||+++|++.......+..........|.+++.+|+|+|++++||+++.+.
T Consensus 183 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~ 262 (293)
T 3grk_A 183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSR 262 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence 99999999999999999999999999999999999999876544345566677789999999999999999999999999
Q ss_pred CccccEEEeCCCcCCCCCC
Q 024125 247 YITGQIISVDGGFTANGFN 265 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~~~~ 265 (272)
++||++|.+|||+++.+..
T Consensus 263 ~itG~~i~vdGG~~~~~~~ 281 (293)
T 3grk_A 263 SVTGEVHHADSGYHVIGMK 281 (293)
T ss_dssp TCCSCEEEESTTGGGBCC-
T ss_pred CCcceEEEECCCcccCCCC
Confidence 9999999999999988653
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=329.62 Aligned_cols=248 Identities=29% Similarity=0.389 Sum_probs=217.4
Q ss_pred CCCCCCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGT-RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~-~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+..++++|++|||||+ +|||++++++|+++|++|++++|+.+++++..+++.+. +.++.++.+|++|.++++++++++
T Consensus 16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence 3456899999999997 59999999999999999999999999999998888655 368999999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCCCCCCChhh
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|+++ +.++||++||..+..+.++...|
T Consensus 96 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 174 (266)
T 3o38_A 96 VEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY 174 (266)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred HHHh-CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchH
Confidence 9999 699999999999888888899999999999999999999999999999887 66899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+++|+++++.|++++||+||+|+||+++|++...... ++.........+.+++.+|+|+|++++||+++...+
T Consensus 175 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~ 253 (266)
T 3o38_A 175 AAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSY 253 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccC
Confidence 9999999999999999999999999999999999999876533 344556667788999999999999999999999999
Q ss_pred ccccEEEeCCCcC
Q 024125 248 ITGQIISVDGGFT 260 (272)
Q Consensus 248 ~~G~~i~~dgG~~ 260 (272)
+||++|++|||++
T Consensus 254 ~tG~~i~vdgG~~ 266 (266)
T 3o38_A 254 MTGEVVSVSSQRA 266 (266)
T ss_dssp CCSCEEEESSCCC
T ss_pred ccCCEEEEcCCcC
Confidence 9999999999974
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-49 Score=329.29 Aligned_cols=244 Identities=31% Similarity=0.455 Sum_probs=221.6
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+++|++|||||++|||++++++|+++|++|++++| +.+++++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF- 80 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 67899999999999999999999999999999999 8888888888887767788899999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||++
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 160 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAG 160 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHH
Confidence 68999999999877778888999999999999999999999999999988777999999999888888889999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+++|+++++.|++++||+||+|+||+++|++..... +..........|.+++.+|+|+|+.+.+|+++...+++|+++
T Consensus 161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~ 238 (246)
T 2uvd_A 161 VIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTL 238 (246)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEE
Confidence 999999999999999999999999999999865432 223334455678889999999999999999988899999999
Q ss_pred EeCCCcCC
Q 024125 254 SVDGGFTA 261 (272)
Q Consensus 254 ~~dgG~~~ 261 (272)
.+|||+++
T Consensus 239 ~vdgG~~~ 246 (246)
T 2uvd_A 239 NVDGGMVM 246 (246)
T ss_dssp EESTTSCC
T ss_pred EECcCccC
Confidence 99999763
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=339.00 Aligned_cols=248 Identities=31% Similarity=0.449 Sum_probs=219.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhCCCeEEEEEecCCCHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------------EVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 80 (272)
.+++||++|||||++|||++++++|+++|++|++++|+ .+.+++..+++...+.++.++.+|++|.++
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS 121 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 35889999999999999999999999999999999876 777788888887778889999999999999
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCC
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS 159 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~ 159 (272)
++++++++.+++ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||..+..
T Consensus 122 v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~ 200 (317)
T 3oec_A 122 LQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR 200 (317)
T ss_dssp HHHHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred HHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence 999999999999 6999999999998888889999999999999999999999999999998765 68999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-----------hCHHHHHHH---HhcCCCC
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-----------ENKEFVDKV---IARTPLQ 225 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-----------~~~~~~~~~---~~~~~~~ 225 (272)
+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++..... ...+..... ....| .
T Consensus 201 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 279 (317)
T 3oec_A 201 GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-I 279 (317)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-S
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-C
Confidence 99999999999999999999999999999999999999999999864210 011111111 12233 6
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 226 RVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 226 ~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++.+|+|+|+++.||+++.+.|+||++|++|||++++
T Consensus 280 ~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~ 316 (317)
T 3oec_A 280 PWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR 316 (317)
T ss_dssp SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred CCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence 7789999999999999999999999999999999864
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=333.41 Aligned_cols=245 Identities=24% Similarity=0.302 Sum_probs=220.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHH-hCCCeEEEEEecCCCHH-----------
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQ-SKGFVVSGSVCDAASPD----------- 79 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~----------- 79 (272)
+++++|++|||||++|||++++++|+++|++|++++ |+.+.+++..+++. ..+.++.++++|+++.+
T Consensus 5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence 458899999999999999999999999999999999 99999888888886 55678899999999999
Q ss_pred ------HHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCC--------------HHHHHHHHHHHhHHHHHHHHHHHH
Q 024125 80 ------QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYS--------------AEEYSKIMTTNFESTYHLCQLVYP 139 (272)
Q Consensus 80 ------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~~~~ 139 (272)
+++++++++.+.+ +++|+||||||+....++.+.+ .++|++++++|+.+++.++++++|
T Consensus 85 ~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 163 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 163 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999999 6999999999987777888888 899999999999999999999999
Q ss_pred HHHcCC------CCeEEEecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH
Q 024125 140 LLKASG------VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE 213 (272)
Q Consensus 140 ~~~~~~------~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~ 213 (272)
+|++++ .++||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+| . . .++
T Consensus 164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~--~~~ 239 (291)
T 1e7w_A 164 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M--PPA 239 (291)
T ss_dssp HHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S--CHH
T ss_pred HHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C--CHH
Confidence 998876 68999999999999999999999999999999999999999999999999999999999 4 3 244
Q ss_pred HHHHHHhcCCCC-CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 214 FVDKVIARTPLQ-RVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 214 ~~~~~~~~~~~~-~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.........|.+ ++.+|+|+|++++||+++...++||++|.+|||+++.
T Consensus 240 ~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~ 289 (291)
T 1e7w_A 240 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 289 (291)
T ss_dssp HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence 445555667888 8999999999999999998999999999999998764
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-49 Score=330.71 Aligned_cols=246 Identities=29% Similarity=0.435 Sum_probs=214.2
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++|||||++|||++++++|+++|++|++++|+.+. +++..+++... +.++.++.+|++|.++++++++++.+.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 678999999999999999999999999999999999887 77777777654 5678889999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||.....++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+.++...|++||+
T Consensus 82 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (260)
T 1x1t_A 82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence 6899999999987777888899999999999999999999999999998877799999999999988899999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---------HHHHHHH-HhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---------KEFVDKV-IARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
++++|+++++.|++++||+||+|+||+++|++....... .+..... ....|.+++.+|+|+++.+++|++
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s 240 (260)
T 1x1t_A 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999997643211 1112222 344688899999999999999999
Q ss_pred CCCCCccccEEEeCCCcCC
Q 024125 243 PAASYITGQIISVDGGFTA 261 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~ 261 (272)
+...+++|+++.+|||+++
T Consensus 241 ~~~~~~tG~~~~vdgG~~~ 259 (260)
T 1x1t_A 241 DAAAQITGTTVSVDGGWTA 259 (260)
T ss_dssp GGGTTCCSCEEEESTTGGG
T ss_pred hhhcCCCCCEEEECCCccC
Confidence 8889999999999999875
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=328.16 Aligned_cols=250 Identities=34% Similarity=0.514 Sum_probs=224.6
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
..++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++..+.+|++|.++++++++++.+.
T Consensus 9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL 88 (260)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999999888888888777778888999999999999999999999
Q ss_pred cCCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||... ..++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+.++...|++|
T Consensus 89 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 167 (260)
T 2zat_A 89 H-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVS 167 (260)
T ss_dssp H-SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHH
Confidence 8 69999999999853 467778899999999999999999999999999998888999999999999998999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|++++.|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+|+++.+|+++...+++|
T Consensus 168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG 247 (260)
T 2zat_A 168 KTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITG 247 (260)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccC
Confidence 99999999999999999999999999999999997654333333333445568888999999999999999988899999
Q ss_pred cEEEeCCCcCCC
Q 024125 251 QIISVDGGFTAN 262 (272)
Q Consensus 251 ~~i~~dgG~~~~ 262 (272)
+++++|||+..+
T Consensus 248 ~~~~vdgG~~~s 259 (260)
T 2zat_A 248 ETVVVGGGTASR 259 (260)
T ss_dssp CEEEESTTCCCC
T ss_pred CEEEECCCcccc
Confidence 999999998754
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=333.16 Aligned_cols=246 Identities=30% Similarity=0.387 Sum_probs=212.3
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhCCCeEEEEEecCCCH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------------EVELNKCLKEWQSKGFVVSGSVCDAASP 78 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 78 (272)
+..+++||++|||||++|||++++++|+++|++|++++|+ .+.+++..+++...+.++.++.+|++|.
T Consensus 7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR 86 (278)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 4567899999999999999999999999999999999987 7777888777777778899999999999
Q ss_pred HHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCC
Q 024125 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGG 157 (272)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~ 157 (272)
++++++++++.+++ +++|+||||||+..... +.++|++++++|+.++++++++++|+|.+++ .|+||++||..+
T Consensus 87 ~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 161 (278)
T 3sx2_A 87 ESLSAALQAGLDEL-GRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG 161 (278)
T ss_dssp HHHHHHHHHHHHHH-CCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHc-CCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence 99999999999999 69999999999865433 5889999999999999999999999998764 689999999998
Q ss_pred CCCC----CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHH---------HHhcCCC
Q 024125 158 LSHV----GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDK---------VIARTPL 224 (272)
Q Consensus 158 ~~~~----~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~ 224 (272)
..+. ++...|++||+|+++|+++++.|++++||+||+|+||+++|++............. .....|
T Consensus 162 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 240 (278)
T 3sx2_A 162 LAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP- 240 (278)
T ss_dssp TSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-
T ss_pred cCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-
Confidence 8776 66788999999999999999999999999999999999999997532211111111 112234
Q ss_pred CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 225 QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 225 ~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+++.+|+|+|++++||+++...++||++|++|||++++
T Consensus 241 ~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~k 278 (278)
T 3sx2_A 241 VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLNK 278 (278)
T ss_dssp CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTC
T ss_pred cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcccC
Confidence 67889999999999999999999999999999999863
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=330.96 Aligned_cols=242 Identities=31% Similarity=0.472 Sum_probs=215.8
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+....++++|++|||||++|||++++++|+++|++|++++|+.+... ..+..+.+|++|.++++++++++
T Consensus 6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~ 75 (269)
T 3vtz_A 6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----------NVSDHFKIDVTNEEEVKEAVEKT 75 (269)
T ss_dssp ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----------TSSEEEECCTTCHHHHHHHHHHH
T ss_pred cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----------CceeEEEecCCCHHHHHHHHHHH
Confidence 34566789999999999999999999999999999999999876431 24567889999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
.+.+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|+
T Consensus 76 ~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 154 (269)
T 3vtz_A 76 TKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYV 154 (269)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHH
T ss_pred HHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHH
Confidence 9999 799999999999888888899999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---------HHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
+||+|+++|+++++.|+++ +|+||+|+||+++|++....... .+.........|.+++.+|+|+|++++|
T Consensus 155 asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~ 233 (269)
T 3vtz_A 155 TSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAF 233 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999988 89999999999999997654211 2345556677899999999999999999
Q ss_pred HhcCCCCCccccEEEeCCCcCCC
Q 024125 240 LCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
|+++.+.++||++|++|||+++.
T Consensus 234 L~s~~~~~itG~~i~vdGG~~~~ 256 (269)
T 3vtz_A 234 LASDRSSFITGACLTVDGGLLSK 256 (269)
T ss_dssp HHSGGGTTCCSCEEEESTTGGGB
T ss_pred HhCCccCCCcCcEEEECCCcccc
Confidence 99999999999999999998866
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-49 Score=331.49 Aligned_cols=242 Identities=24% Similarity=0.349 Sum_probs=200.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++ +.++.++.+|++|.++++++++++.+++
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF 79 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999999998877776655 3567888999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCC----CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCeEEEecCCCCCCCCC
Q 024125 93 NGKLNILVNNVGTNIRKPTI----EYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISSVGGLSHVG 162 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~ii~vsS~~~~~~~~ 162 (272)
+++|++|||||.....++. +.+.++|++++++|+.++++++++++|+|+++ +.|+||++||..+..+.+
T Consensus 80 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tpc_A 80 -GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI 158 (257)
T ss_dssp -SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred -CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence 6999999999987655543 67889999999999999999999999999874 568999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLVAYLC 241 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~a~~~~~l~ 241 (272)
+...|++||+|+++|+++++.|++++||+||+|+||+++|++..... ++.........|. +++.+|+|+++++.||+
T Consensus 159 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~ 236 (257)
T 3tpc_A 159 GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP--QDVQDALAASVPFPPRLGRAEEYAALVKHIC 236 (257)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999986653 2334455566777 89999999999999999
Q ss_pred cCCCCCccccEEEeCCCcCCC
Q 024125 242 LPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++ .++||++|.+|||+++.
T Consensus 237 s~--~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 237 EN--TMLNGEVIRLDGALRMA 255 (257)
T ss_dssp HC--TTCCSCEEEESTTCCC-
T ss_pred cc--CCcCCcEEEECCCccCC
Confidence 75 79999999999998864
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-49 Score=331.01 Aligned_cols=248 Identities=30% Similarity=0.425 Sum_probs=187.3
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|.++++++++++.
T Consensus 2 p~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 2 PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred HHcCCCccEEEECCCC---CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 90 SKFNGKLNILVNNVGT---NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 90 ~~~~~~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
+.+ +++|++|||||+ ....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+. ++...
T Consensus 82 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~ 157 (253)
T 3qiv_A 82 AEF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNY 157 (253)
T ss_dssp HHH-SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------------
T ss_pred HHc-CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCch
Confidence 999 699999999998 34456778899999999999999999999999999998888999999999876 45678
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|++||+++++|+++++.|++++||+|++++||+++|++...... .+.........|.+++.+|+|+++++.+|+++...
T Consensus 158 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~ 236 (253)
T 3qiv_A 158 YGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP-KEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEAS 236 (253)
T ss_dssp --CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CCHHHHHHHHHHSGGGT
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc-HHHHHHHhccCCCCCCCCHHHHHHHHHHHcCcccc
Confidence 99999999999999999999999999999999999998765432 34455556677888999999999999999999999
Q ss_pred CccccEEEeCCCcCCC
Q 024125 247 YITGQIISVDGGFTAN 262 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~ 262 (272)
+++|++|++|||..++
T Consensus 237 ~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 237 WITGQIFNVDGGQIIR 252 (253)
T ss_dssp TCCSCEEEC-------
T ss_pred CCCCCEEEECCCeecC
Confidence 9999999999998875
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-48 Score=323.52 Aligned_cols=242 Identities=30% Similarity=0.428 Sum_probs=217.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ + +.++.+|++|.++++++++++.+++
T Consensus 1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (245)
T 1uls_A 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHL 75 (245)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999999999988877665443 2 6778899999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||.. ..+.++...|++||+
T Consensus 76 -g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~ 153 (245)
T 1uls_A 76 -GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMA 153 (245)
T ss_dssp -SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHH
Confidence 699999999998877788889999999999999999999999999999888789999999998 778888899999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
++++|+++++.|++++||+||+|+||+++|++.... .++.........|.+++.+|+|+|+.+++|+++...+++|++
T Consensus 154 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~ 231 (245)
T 1uls_A 154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQV 231 (245)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCE
Confidence 999999999999999999999999999999987543 233344455667888999999999999999998889999999
Q ss_pred EEeCCCcCCCC
Q 024125 253 ISVDGGFTANG 263 (272)
Q Consensus 253 i~~dgG~~~~~ 263 (272)
+.+|||+++..
T Consensus 232 ~~vdgG~~~~~ 242 (245)
T 1uls_A 232 LFVDGGRTIGA 242 (245)
T ss_dssp EEESTTTTTTC
T ss_pred EEECCCcccCC
Confidence 99999988753
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=326.31 Aligned_cols=243 Identities=31% Similarity=0.436 Sum_probs=207.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|++|||||++|||++++++|+++|++|++++|+. +++++ ++...+.++.++.+|++|.++++++++++.+.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999999988 66654 334445678889999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++||+
T Consensus 81 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 159 (249)
T 2ew8_A 81 -GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA 159 (249)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHH
Confidence 6899999999987777888899999999999999999999999999998877799999999999999899999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH-hhhhC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE-RLLEN-KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
+++.|+++++.|++++||+||+|+||+++|++.. ..... ++...... .|.+++.+|+|+|+.+.+|+++...+++|
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~~~~tG 237 (249)
T 2ew8_A 160 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLASDDASFITG 237 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcCcccCCCCC
Confidence 9999999999999999999999999999999975 33211 11111111 57788999999999999999988899999
Q ss_pred cEEEeCCCcCCC
Q 024125 251 QIISVDGGFTAN 262 (272)
Q Consensus 251 ~~i~~dgG~~~~ 262 (272)
+++.+|||++.+
T Consensus 238 ~~~~vdGG~~~~ 249 (249)
T 2ew8_A 238 QTLAVDGGMVRH 249 (249)
T ss_dssp CEEEESSSCCCC
T ss_pred cEEEECCCccCc
Confidence 999999998753
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=331.83 Aligned_cols=251 Identities=27% Similarity=0.377 Sum_probs=216.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++.+|+++.++++++++++.+++
T Consensus 1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4688999999999999999999999999999999999998887766543 4578889999999999999999999999
Q ss_pred CCCccEEEECCCCCCCC-CC----CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 93 NGKLNILVNNVGTNIRK-PT----IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~-~~----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++|++|||||+.... ++ .+.+.++|++++++|+.+++.++++++|+|.+++ |+||++||..+..+.++...|
T Consensus 78 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y 155 (281)
T 3zv4_A 78 -GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLY 155 (281)
T ss_dssp -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHH
T ss_pred -CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchh
Confidence 6999999999975432 22 2445678999999999999999999999998765 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--------CHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--------NKEFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
++||+|+++|+++++.|++++ |+||+|+||+++|+|...... ..+.........|.+++.+|+|+|++++|
T Consensus 156 ~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f 234 (281)
T 3zv4_A 156 TATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVF 234 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999987 999999999999998642211 11234556677899999999999999999
Q ss_pred Hhc-CCCCCccccEEEeCCCcCCCCC-CCCCC
Q 024125 240 LCL-PAASYITGQIISVDGGFTANGF-NPGIR 269 (272)
Q Consensus 240 l~~-~~~~~~~G~~i~~dgG~~~~~~-~~~~~ 269 (272)
|++ +.+.|+||++|.+|||++++++ +.+.+
T Consensus 235 L~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~ 266 (281)
T 3zv4_A 235 FATRGDSLPATGALLNYDGGMGVRGFLTAAGG 266 (281)
T ss_dssp HHSTTTSTTCSSCEEEESSSGGGCCSSSSCSC
T ss_pred hhcccccccccCcEEEECCCCccccchhhcCC
Confidence 999 8889999999999999999854 44443
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-48 Score=328.20 Aligned_cols=247 Identities=33% Similarity=0.511 Sum_probs=223.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 97 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY- 97 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 6889999999999999999999999999999999999999888888887767788899999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH--HHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL--LKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~--~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|. |++++.++||++||..+..+.++...|++||
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 177 (277)
T 2rhc_B 98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASK 177 (277)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHH
Confidence 68999999999877778888999999999999999999999999999 8877778999999999998888999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---C------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---N------KEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
++++.|+++++.|++++||+||+|+||+++|++...... . ++.........|.+++.+|+|+|+++++|++
T Consensus 178 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s 257 (277)
T 2rhc_B 178 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG 257 (277)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999765421 1 2233444556788999999999999999999
Q ss_pred CCCCCccccEEEeCCCcCC
Q 024125 243 PAASYITGQIISVDGGFTA 261 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~ 261 (272)
+...+++|+++.+|||++.
T Consensus 258 ~~~~~~tG~~~~vdGG~~~ 276 (277)
T 2rhc_B 258 PGAAAVTAQALNVCGGLGN 276 (277)
T ss_dssp GGGTTCCSCEEEESTTCCC
T ss_pred chhcCCCCcEEEECCCccc
Confidence 8889999999999999753
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=331.35 Aligned_cols=246 Identities=27% Similarity=0.469 Sum_probs=220.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+++|++|||||++|||++++++|+++|++|++++ |+.+..++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999988 66777777777777777789999999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||+....++.+.+.++|++++++|+.+++++++.++|+|++++.|+||++||..+..+.++...|++||+
T Consensus 102 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 180 (269)
T 3gk3_A 102 -GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKA 180 (269)
T ss_dssp -SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHH
Confidence 6999999999998888888999999999999999999999999999998888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHH-HHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVD-KVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
|+++|+++++.|++++||+|++|+||+++|++...... +... ......|.+++.+|+|+|+++.+|+++...++||+
T Consensus 181 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~ 258 (269)
T 3gk3_A 181 GIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ--DVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGA 258 (269)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSC
T ss_pred HHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch--hHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCc
Confidence 99999999999999999999999999999999765432 1222 34456788999999999999999999999999999
Q ss_pred EEEeCCCcCCC
Q 024125 252 IISVDGGFTAN 262 (272)
Q Consensus 252 ~i~~dgG~~~~ 262 (272)
+|++|||++++
T Consensus 259 ~i~vdgG~~~s 269 (269)
T 3gk3_A 259 DLAINGGMHMS 269 (269)
T ss_dssp EEEESTTSCCC
T ss_pred EEEECCCEeCc
Confidence 99999998763
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-48 Score=328.38 Aligned_cols=248 Identities=27% Similarity=0.456 Sum_probs=222.7
Q ss_pred CCCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHH-HHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVEL-NKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
+.+++++|++|||||+ +|||++++++|+++|++|++++|+.+.. ++..+++.+ .+.++.++.+|++|.++++++++
T Consensus 14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 93 (267)
T 3gdg_A 14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK 93 (267)
T ss_dssp HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence 3467899999999999 9999999999999999999998876554 555555543 36789999999999999999999
Q ss_pred HHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC--CCC
Q 024125 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--GSG 164 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~--~~~ 164 (272)
++.+++ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+. ++.
T Consensus 94 ~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 172 (267)
T 3gdg_A 94 DVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQ 172 (267)
T ss_dssp HHHHHT-SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCC
T ss_pred HHHHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCC
Confidence 999999 79999999999988888889999999999999999999999999999998888999999999887665 577
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
..|++||+|+++|+++++.|+++. |+||+|+||+++|++.... .++.........|.+++.+|+|++++++||+++.
T Consensus 173 ~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~ 249 (267)
T 3gdg_A 173 TSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAKELKGAYVYFASDA 249 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS--CHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTT
T ss_pred CcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC--CHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCc
Confidence 899999999999999999999887 9999999999999998654 3455566677889999999999999999999999
Q ss_pred CCCccccEEEeCCCcCCC
Q 024125 245 ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~ 262 (272)
..++||++|.+|||++++
T Consensus 250 ~~~itG~~i~vdgG~~~r 267 (267)
T 3gdg_A 250 STYTTGADLLIDGGYTTR 267 (267)
T ss_dssp CTTCCSCEEEESTTGGGC
T ss_pred cccccCCEEEECCceecC
Confidence 999999999999999864
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=326.19 Aligned_cols=249 Identities=27% Similarity=0.431 Sum_probs=220.0
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
.+.+++++|++|||||++|||++++++|+++|++|++++|+.+. .++..+++...+.++.++.+|++|.++++++++++
T Consensus 22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999998654 55666677766778889999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC-Chhh
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-GSIY 167 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~-~~~Y 167 (272)
.+.+ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+| ++.|+||++||..+..+.++ ...|
T Consensus 102 ~~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y 178 (283)
T 1g0o_A 102 VKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVY 178 (283)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHH
T ss_pred HHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcch
Confidence 9998 699999999998877788889999999999999999999999999999 34589999999998877664 8899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHh--cCCCCCCCCHHHHHHH
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIA--RTPLQRVGEPEEVASL 236 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~e~a~~ 236 (272)
++||+++++|+++++.|++++||+||+|+||+++|++...... .++....+.. ..|.+++.+|+|+|++
T Consensus 179 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 258 (283)
T 1g0o_A 179 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV 258 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999765421 2333444444 6789999999999999
Q ss_pred HHHHhcCCCCCccccEEEeCCCcCC
Q 024125 237 VAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
+.||+++...+++|++|.+|||+++
T Consensus 259 v~~l~s~~~~~itG~~i~vdgG~~~ 283 (283)
T 1g0o_A 259 VCFLASNDGGWVTGKVIGIDGGACM 283 (283)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHHhCccccCcCCCEEEeCCCccC
Confidence 9999999899999999999999763
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=327.20 Aligned_cols=241 Identities=22% Similarity=0.278 Sum_probs=200.6
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
..+.|++++|++|||||++|||++++++|+++|++|++++|+.++..+..++. .+.++.+|++|.++++++++++
T Consensus 19 ~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~ 93 (260)
T 3gem_A 19 FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-----GAVALYGDFSCETGIMAFIDLL 93 (260)
T ss_dssp --------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-----TCEEEECCTTSHHHHHHHHHHH
T ss_pred cccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-----CCeEEECCCCCHHHHHHHHHHH
Confidence 44568899999999999999999999999999999999999987765444332 2677899999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
.+.+ +++|+||||||+..... .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|+
T Consensus 94 ~~~~-g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~ 171 (260)
T 3gem_A 94 KTQT-SSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYC 171 (260)
T ss_dssp HHHC-SCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHH
T ss_pred HHhc-CCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHH
Confidence 9999 69999999999865555 567889999999999999999999999999998889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+|+++|+++++.|+++ +|+||+|+||+++|++.. ............|.+++.+|+|+|++++||+ ...++
T Consensus 172 asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~~i 244 (260)
T 3gem_A 172 ATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLL--DSTYV 244 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHHH--HCSSC
T ss_pred HHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCCCC
Confidence 9999999999999999988 699999999999999754 2234455566789999999999999999999 57899
Q ss_pred cccEEEeCCCcCCCC
Q 024125 249 TGQIISVDGGFTANG 263 (272)
Q Consensus 249 ~G~~i~~dgG~~~~~ 263 (272)
||++|.+|||+++++
T Consensus 245 tG~~i~vdGG~~~~~ 259 (260)
T 3gem_A 245 TGTTLTVNGGRHVKG 259 (260)
T ss_dssp CSCEEEESTTTTTC-
T ss_pred CCCEEEECCCcccCC
Confidence 999999999999874
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-49 Score=332.93 Aligned_cols=242 Identities=31% Similarity=0.460 Sum_probs=213.9
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
...+.+++++|++|||||++|||++++++|+++|++|++++|+.+..+ ....+.+|+++.+++++++++
T Consensus 19 ~~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~ 87 (266)
T 3uxy_A 19 YFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGA 87 (266)
T ss_dssp -------CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHH
T ss_pred chhhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHH
Confidence 344567899999999999999999999999999999999999865432 113457999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|
T Consensus 88 ~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y 166 (266)
T 3uxy_A 88 VAAGL-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALY 166 (266)
T ss_dssp HHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHH
T ss_pred HHHhc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHH
Confidence 99999 69999999999988888889999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-----KEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
++||+|+++|+++++.|++++||+||+|+||+++|++....... .+.........|.+++.+|+|+|++++||++
T Consensus 167 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s 246 (266)
T 3uxy_A 167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLAS 246 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999997654321 2334566777899999999999999999999
Q ss_pred CCCCCccccEEEeCCCcCC
Q 024125 243 PAASYITGQIISVDGGFTA 261 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~ 261 (272)
+...++||++|.+|||+++
T Consensus 247 ~~~~~itG~~i~vdGG~~~ 265 (266)
T 3uxy_A 247 DAARYLCGSLVEVNGGKAV 265 (266)
T ss_dssp GGGTTCCSCEEEESTTCCC
T ss_pred chhcCCcCCEEEECcCEeC
Confidence 9999999999999999876
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=333.45 Aligned_cols=244 Identities=23% Similarity=0.259 Sum_probs=219.8
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-------HHHHHHHHHHhCCCeEEEEEecCCCHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-------ELNKCLKEWQSKGFVVSGSVCDAASPDQRE 82 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 82 (272)
+++|++++|++|||||++|||++++++|+++|++|++++|+.+ .+++..+++...+.++.++++|++|.++++
T Consensus 2 p~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 81 (285)
T 3sc4_A 2 PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVA 81 (285)
T ss_dssp ----CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 3567899999999999999999999999999999999999876 466777777777789999999999999999
Q ss_pred HHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC-
Q 024125 83 KLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV- 161 (272)
Q Consensus 83 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~- 161 (272)
++++++.+++ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+.
T Consensus 82 ~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~ 160 (285)
T 3sc4_A 82 AAVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW 160 (285)
T ss_dssp HHHHHHHHHH-SCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG
T ss_pred HHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC
Confidence 9999999999 69999999999988889999999999999999999999999999999998888999999999988875
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCC-cccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW-YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l 240 (272)
++...|++||+|+++|+++++.|++++||+||+|+|| .++|++...... ...+.+++.+|+|+|++++||
T Consensus 161 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~---------~~~~~~r~~~pedvA~~~~~l 231 (285)
T 3sc4_A 161 LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLG---------GDEAMARSRKPEVYADAAYVV 231 (285)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHT---------SCCCCTTCBCTHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhcc---------ccccccCCCCHHHHHHHHHHH
Confidence 7789999999999999999999999999999999999 799999765432 235678899999999999999
Q ss_pred hcCCCCCccccEEEeCCCcCCCCC
Q 024125 241 CLPAASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 241 ~~~~~~~~~G~~i~~dgG~~~~~~ 264 (272)
+++.. ++||+++.+|||+...++
T Consensus 232 ~s~~~-~~tG~~i~~dgg~~~~g~ 254 (285)
T 3sc4_A 232 LNKPS-SYTGNTLLCEDVLLESGV 254 (285)
T ss_dssp HTSCT-TCCSCEEEHHHHHHHHTC
T ss_pred hCCcc-cccceEEEEcCchhccCc
Confidence 99888 999999999999766544
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=323.14 Aligned_cols=247 Identities=31% Similarity=0.444 Sum_probs=216.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+. ++..+++. + .++.+|++|.++++++++++.+.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~- 75 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL- 75 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999999999999999999877 66665553 3 678999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++||++
T Consensus 76 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 155 (256)
T 2d1y_A 76 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG 155 (256)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHH
Confidence 69999999999887778888999999999999999999999999999998888999999999999888999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhh----hhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERL----LENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
+++|+++++.|++++||+||+|+||+++|++.... ...++.........|.+++.+|+|+|+++++|+++...+++
T Consensus 156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~ 235 (256)
T 2d1y_A 156 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT 235 (256)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence 99999999999999999999999999999997653 11122223344556888999999999999999998888999
Q ss_pred ccEEEeCCCcCCCCCCCC
Q 024125 250 GQIISVDGGFTANGFNPG 267 (272)
Q Consensus 250 G~~i~~dgG~~~~~~~~~ 267 (272)
|+++.+|||+.+.....|
T Consensus 236 G~~~~v~gG~~~~~~~~~ 253 (256)
T 2d1y_A 236 GAILPVDGGMTASFMMAG 253 (256)
T ss_dssp SCEEEESTTGGGBC----
T ss_pred CCEEEECCCccccccccC
Confidence 999999999988765444
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-48 Score=331.31 Aligned_cols=252 Identities=29% Similarity=0.418 Sum_probs=222.3
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCC---eEEEEEecCCCHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF---VVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~ 87 (272)
..+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+. ++.++.+|++|.+++++++++
T Consensus 20 ~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp ---CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999999888888876655 788999999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCC--CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC-CCC
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKP--TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSG 164 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-~~~ 164 (272)
+.+++ +++|+||||||.....+ +.+.+.++|++++++|+.+++.++++++|.|.+++ |+||++||..+..+. ++.
T Consensus 100 ~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~ 177 (297)
T 1xhl_A 100 TLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGY 177 (297)
T ss_dssp HHHHH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTS
T ss_pred HHHhc-CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCc
Confidence 99999 69999999999876666 78889999999999999999999999999998877 999999999988887 888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-------HHHHHHHHhcCCCCCCCCHHHHHHHH
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-------KEFVDKVIARTPLQRVGEPEEVASLV 237 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~a~~~ 237 (272)
..|++||++++.|+++++.|++++||+||+|+||+++|++....... .+.........|.+++.+|+|+|+++
T Consensus 178 ~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 257 (297)
T 1xhl_A 178 PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANII 257 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999997654211 11222333446788999999999999
Q ss_pred HHHhcCC-CCCccccEEEeCCCcCCCCC
Q 024125 238 AYLCLPA-ASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 238 ~~l~~~~-~~~~~G~~i~~dgG~~~~~~ 264 (272)
++|+++. ..+++|++|.+|||+++...
T Consensus 258 ~~l~s~~~~~~itG~~i~vdGG~~~~~~ 285 (297)
T 1xhl_A 258 VFLADRNLSSYIIGQSIVADGGSTLVMG 285 (297)
T ss_dssp HHHHCHHHHTTCCSCEEEESTTGGGCCG
T ss_pred HHHhCCcccCCccCcEEEECCCcccccc
Confidence 9999987 88999999999999887643
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-48 Score=326.17 Aligned_cols=251 Identities=21% Similarity=0.253 Sum_probs=224.9
Q ss_pred CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCC-eEEEEEecCCCHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 13 ~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+++++|++|||||+ +|||++++++|+++|++|++++|+....+...+.....+. ++.++.+|++|.++++++++++.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 46889999999999 6699999999999999999999987655555554444443 78899999999999999999999
Q ss_pred HHcCCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh
Q 024125 90 SKFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~ 165 (272)
+++ +++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++ .|+||++||..+..+.++..
T Consensus 83 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~ 159 (266)
T 3oig_A 83 EQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYN 159 (266)
T ss_dssp HHH-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTH
T ss_pred HHh-CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcc
Confidence 999 69999999999865 467788899999999999999999999999999964 48999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
.|++||+|+++|+++++.|++++||+|++|+||+++|++.......++.........|.+++.+|+|+|+++++|+++..
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~ 239 (266)
T 3oig_A 160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMS 239 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCch
Confidence 99999999999999999999999999999999999999987664445566677778899999999999999999999989
Q ss_pred CCccccEEEeCCCcCCCCCCC
Q 024125 246 SYITGQIISVDGGFTANGFNP 266 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~~~~~ 266 (272)
.+++|++|.+|||+++...+.
T Consensus 240 ~~~tG~~i~vdGG~~~~~~~~ 260 (266)
T 3oig_A 240 RGITGENLHVDSGFHITARLE 260 (266)
T ss_dssp TTCCSCEEEESTTGGGCCCCC
T ss_pred hcCcCCEEEECCCeEEeeecC
Confidence 999999999999999886653
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=323.01 Aligned_cols=244 Identities=31% Similarity=0.450 Sum_probs=217.0
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+++|++|||||++|||++++++|+++|++|++++|+.+ ++..+++...+.++.++.+|++|.++++++++++.+++ +
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g 78 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-G 78 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-S
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-C
Confidence 67899999999999999999999999999999999876 45556666556678889999999999999999999999 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||+++
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 158 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGV 158 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHH
Confidence 99999999998777788888999999999999999999999999999988889999999999998889999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-HHH---H----HHH-HhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-KEF---V----DKV-IARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~---~----~~~-~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
++|+++++.|++++||+||+|+||+++|++....... ++. . ... ....|.+++.+|+|+|+++++|+++..
T Consensus 159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 238 (255)
T 2q2v_A 159 VGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG 238 (255)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence 9999999999999999999999999999997653210 111 1 223 445688899999999999999999888
Q ss_pred CCccccEEEeCCCcCC
Q 024125 246 SYITGQIISVDGGFTA 261 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~ 261 (272)
.+++|++|.+|||+++
T Consensus 239 ~~~tG~~~~vdgG~~~ 254 (255)
T 2q2v_A 239 SQVRGAAWNVDGGWLA 254 (255)
T ss_dssp TTCCSCEEEESTTGGG
T ss_pred CCCCCCEEEECCCccC
Confidence 9999999999999865
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-48 Score=328.76 Aligned_cols=252 Identities=22% Similarity=0.265 Sum_probs=221.5
Q ss_pred cCCCCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
+....++++|++|||||+ +|||++++++|+++|++|++++|+. .++..+++.+...++.++.+|+++.++++++++
T Consensus 18 ~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 95 (280)
T 3nrc_A 18 GSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFV 95 (280)
T ss_dssp ----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHH
T ss_pred CCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHH
Confidence 334456889999999988 7799999999999999999999987 334444554444468889999999999999999
Q ss_pred HHHHHcCCCccEEEECCCCCCC----CCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC
Q 024125 87 EVGSKFNGKLNILVNNVGTNIR----KPTIE-YSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV 161 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~ 161 (272)
++.+.+ +++|+||||||+... .++.+ .+.++|++.+++|+.++++++++++|+|+++ .++||++||..+..+.
T Consensus 96 ~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~ 173 (280)
T 3nrc_A 96 ELGKVW-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAM 173 (280)
T ss_dssp HHHHHC-SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCC
T ss_pred HHHHHc-CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCC
Confidence 999999 799999999998654 44444 8899999999999999999999999999866 5899999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
++...|++||+|+++|+++++.|++++||+|++|+||+++|++.......++.........|.+++.+|+|+|+.+++|+
T Consensus 174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~ 253 (280)
T 3nrc_A 174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLC 253 (280)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTT
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998766544566677777889999999999999999999
Q ss_pred cCCCCCccccEEEeCCCcCCCCC
Q 024125 242 LPAASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~~~~ 264 (272)
++...+++|++|.+|||+++.++
T Consensus 254 s~~~~~~tG~~i~vdgG~~~~~~ 276 (280)
T 3nrc_A 254 SDMATGITGEVVHVDAGYHCVSM 276 (280)
T ss_dssp SGGGTTCCSCEEEESTTGGGCCC
T ss_pred CcccCCcCCcEEEECCCccccCC
Confidence 99999999999999999998764
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=334.75 Aligned_cols=248 Identities=22% Similarity=0.301 Sum_probs=213.1
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhCCCeEEEEEecCCC
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------------EVELNKCLKEWQSKGFVVSGSVCDAAS 77 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~ 77 (272)
.+..+++||++|||||++|||++++++|+++|++|++++|+ .+.+++...++...+.++.++.+|++|
T Consensus 3 ~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 3 GSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD 82 (287)
T ss_dssp TSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC
T ss_pred CcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC
Confidence 45567999999999999999999999999999999999987 777788887887778899999999999
Q ss_pred HHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
.++++++++++.+++ +++|+||||||+.... .+.+.++|++.+++|+.++++++++++|+| .+.++||++||..+
T Consensus 83 ~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~ 157 (287)
T 3pxx_A 83 RAAVSRELANAVAEF-GKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAG 157 (287)
T ss_dssp HHHHHHHHHHHHHHH-SCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHH
T ss_pred HHHHHHHHHHHHHHc-CCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchh
Confidence 999999999999999 6999999999986554 337889999999999999999999999999 34489999999877
Q ss_pred CCCC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHH---
Q 024125 158 LSHV-----------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEF--- 214 (272)
Q Consensus 158 ~~~~-----------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~--- 214 (272)
..+. ++...|++||+++++|+++++.|++++||+||+|+||+++|+|...... .+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T 3pxx_A 158 LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA 237 (287)
T ss_dssp HHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred cccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence 6544 5668899999999999999999999999999999999999999753210 0011
Q ss_pred HHH--HHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 215 VDK--VIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 215 ~~~--~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
... .....| +++.+|+|+|++++||+++.+.|+||++|.+|||+++++
T Consensus 238 ~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~~ 287 (287)
T 3pxx_A 238 LLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLKF 287 (287)
T ss_dssp HHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGGC
T ss_pred HhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhcC
Confidence 111 122334 788999999999999999999999999999999998763
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-48 Score=325.21 Aligned_cols=247 Identities=30% Similarity=0.370 Sum_probs=216.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
|++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|.++++++++++.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999888887777643 33788899999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
++ + +|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++|
T Consensus 83 ~~-g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 160 (260)
T 2z1n_A 83 LG-G-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM 160 (260)
T ss_dssp TT-C-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred hc-C-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence 88 5 999999999877778888999999999999999999999999999988777999999999999998999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh--------hCHHH-HHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL--------ENKEF-VDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
|+++++|+++++.|++++||+||+|+||+++|++..... ...+. ........|.+++.+|+|+|+.+.+|+
T Consensus 161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~ 240 (260)
T 2z1n_A 161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLA 240 (260)
T ss_dssp THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999865110 01111 233444568889999999999999999
Q ss_pred cCCCCCccccEEEeCCCcCC
Q 024125 242 LPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~ 261 (272)
++...+++|++|.+|||+++
T Consensus 241 s~~~~~~tG~~i~vdGG~~~ 260 (260)
T 2z1n_A 241 SEKASFITGAVIPVDGGAHI 260 (260)
T ss_dssp SGGGTTCCSCEEEESTTTTC
T ss_pred CccccCCCCCEEEeCCCccC
Confidence 98889999999999999764
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=326.88 Aligned_cols=247 Identities=30% Similarity=0.423 Sum_probs=220.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCC---eEEEEEecCCCHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF---VVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+. ++.++.+|++|.++++++++++.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999998888888876555 788999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCC----CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC-CCCh
Q 024125 91 KFNGKLNILVNNVGTNIRKP----TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGS 165 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-~~~~ 165 (272)
++ +++|+||||||.....+ +.+.+.++|++.+++|+.+++.++++++|+|++++ ++||++||..+..+. ++..
T Consensus 83 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~ 160 (280)
T 1xkq_A 83 QF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFL 160 (280)
T ss_dssp HH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSH
T ss_pred hc-CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCccc
Confidence 99 68999999999876666 77889999999999999999999999999998766 999999999988887 8889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-------HHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-------KEFVDKVIARTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~a~~~~ 238 (272)
.|++||+++++|+++++.|++++||+||+|+||+++|++....... .+.........|.+++.+|+|+|+.++
T Consensus 161 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~ 240 (280)
T 1xkq_A 161 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 240 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999997654201 112233334467889999999999999
Q ss_pred HHhcCC-CCCccccEEEeCCCcCCC
Q 024125 239 YLCLPA-ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 239 ~l~~~~-~~~~~G~~i~~dgG~~~~ 262 (272)
+|+++. ..+++|+++.+|||+++.
T Consensus 241 ~l~s~~~~~~~tG~~i~vdgG~~~~ 265 (280)
T 1xkq_A 241 FLADRNLSFYILGQSIVADGGTSLV 265 (280)
T ss_dssp HHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HhcCcccccCccCCeEEECCCcccc
Confidence 999987 889999999999998765
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=327.05 Aligned_cols=250 Identities=26% Similarity=0.294 Sum_probs=214.5
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHH-hCCCeEEEEEecCCC----HHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQ-SKGFVVSGSVCDAAS----PDQR 81 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-~~~~~~~~~~~-~~~~~~~~~~~D~~~----~~~~ 81 (272)
..++.+++++|++|||||++|||++++++|+++|++|++++|+. +.++++.+++. ..+.++.++.+|++| .+++
T Consensus 14 ~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v 93 (288)
T 2x9g_A 14 LVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASC 93 (288)
T ss_dssp --------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHH
T ss_pred cCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHH
Confidence 34456678999999999999999999999999999999999998 88888888776 456688899999999 9999
Q ss_pred HHHHHHHHHHcCCCccEEEECCCCCCCCCC-----CC-----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC------
Q 024125 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPT-----IE-----YSAEEYSKIMTTNFESTYHLCQLVYPLLKASG------ 145 (272)
Q Consensus 82 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~-----~~-----~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------ 145 (272)
+++++++.+.+ +++|+||||||+....++ .+ .+.++|++.+++|+.+++.++++++|+|++++
T Consensus 94 ~~~~~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~ 172 (288)
T 2x9g_A 94 EEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS 172 (288)
T ss_dssp HHHHHHHHHHH-SCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CC
T ss_pred HHHHHHHHHhc-CCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCC
Confidence 99999999998 699999999998766666 56 78899999999999999999999999998765
Q ss_pred CCeEEEecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCC
Q 024125 146 VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ 225 (272)
Q Consensus 146 ~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 225 (272)
.++||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++ . . .++.........|.+
T Consensus 173 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~--~~~~~~~~~~~~p~~ 248 (288)
T 2x9g_A 173 NLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M--GEEEKDKWRRKVPLG 248 (288)
T ss_dssp CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S--CHHHHHHHHHTCTTT
T ss_pred CeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c--ChHHHHHHHhhCCCC
Confidence 68999999999999999999999999999999999999999999999999999999998 3 2 123334445567888
Q ss_pred CC-CCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 226 RV-GEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 226 ~~-~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++ .+|+|+|++++||+++...+++|++|.+|||+++.
T Consensus 249 r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~ 286 (288)
T 2x9g_A 249 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286 (288)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence 88 99999999999999998999999999999998753
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=323.02 Aligned_cols=245 Identities=31% Similarity=0.383 Sum_probs=219.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.++++++++++.+.+
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 78 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL- 78 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 578999999999999999999999999999999999998888777666 4578889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|+||||||.....++.+.+.++|++++++|+.+++.++++++|.|++++ ++||++||..+..+.++...|++||++
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a 157 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAA 157 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHH
Confidence 6999999999988777888899999999999999999999999999998877 999999999999998999999999999
Q ss_pred HHHHHHHHHHHHccC--CeeEEEeeCCcccChhhHhhhhCHHHHHH-HHh---cCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 174 MNQLTRNLACEWAKD--NIRTNSVAPWYTKTSLVERLLENKEFVDK-VIA---RTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 174 ~~~~~~~la~el~~~--~i~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+++|+++++.|++++ ||+||+|+||+++|++...... ++.... ... ..|.+++.+|+|+|+.+++|+++...+
T Consensus 158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~ 236 (253)
T 1hxh_A 158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP-KGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSV 236 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC-TTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc-hhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccC
Confidence 999999999999988 9999999999999999765322 111122 223 457788899999999999999988899
Q ss_pred ccccEEEeCCCcCCCCC
Q 024125 248 ITGQIISVDGGFTANGF 264 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~~ 264 (272)
++|+++.+|||++..++
T Consensus 237 ~tG~~~~vdgG~~~~~~ 253 (253)
T 1hxh_A 237 MSGSELHADNSILGMGL 253 (253)
T ss_dssp CCSCEEEESSSCTTTTC
T ss_pred CCCcEEEECCCccccCC
Confidence 99999999999887654
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=320.95 Aligned_cols=246 Identities=29% Similarity=0.395 Sum_probs=219.4
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.. ++.++.+|++|.++++++++++.++
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---GGFAVEVDVTKRASVDAAMQKAIDA 83 (263)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 3568899999999999999999999999999999999999887766654432 5677899999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.++...|++|
T Consensus 84 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 162 (263)
T 3ak4_A 84 L-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSAS 162 (263)
T ss_dssp H-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHH
Confidence 9 6899999999987777888899999999999999999999999999998876 6999999999998888899999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----C-----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----N-----KEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
|++++.|+++++.|++++||+|++|+||+++|++...... . ++....+....|.+++.+|+|+|+++++|+
T Consensus 163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~ 242 (263)
T 3ak4_A 163 KFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLA 242 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999765321 1 233344555678899999999999999999
Q ss_pred cCCCCCccccEEEeCCCcCC
Q 024125 242 LPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~ 261 (272)
++...+++|+++++|||+++
T Consensus 243 s~~~~~~tG~~~~vdgG~~~ 262 (263)
T 3ak4_A 243 SDAARFMTGQGINVTGGVRM 262 (263)
T ss_dssp SGGGTTCCSCEEEESSSSSC
T ss_pred CccccCCCCCEEEECcCEeC
Confidence 98889999999999999865
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-48 Score=323.77 Aligned_cols=246 Identities=28% Similarity=0.392 Sum_probs=225.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+++|++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 3789999999999999999999999999999875 788888888888888888899999999999999999999988776
Q ss_pred C-----CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 93 N-----GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 93 ~-----~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+ +++|++|||||+....++.+.+.++|++++++|+.+++.++++++|+|++ .++||++||..+..+.++...|
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y 161 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAY 161 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHH
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchh
Confidence 2 24999999999988888888999999999999999999999999999844 3799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+++|+++++.|+.++||+|++|+||+++|++.......+..........+.+++.+|+|+++++.||+++...+
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~ 241 (255)
T 3icc_A 162 SMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW 241 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCC
Confidence 99999999999999999999999999999999999998877666655666677788999999999999999999999999
Q ss_pred ccccEEEeCCCcCC
Q 024125 248 ITGQIISVDGGFTA 261 (272)
Q Consensus 248 ~~G~~i~~dgG~~~ 261 (272)
++|++|++|||+++
T Consensus 242 ~tG~~i~vdgG~~l 255 (255)
T 3icc_A 242 VTGQLIDVSGGSCL 255 (255)
T ss_dssp CCSCEEEESSSTTC
T ss_pred ccCCEEEecCCeeC
Confidence 99999999999875
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=324.66 Aligned_cols=251 Identities=25% Similarity=0.381 Sum_probs=210.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++.+|++|||||++|||++++++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|.++++++++++.++
T Consensus 3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999998776544 44555555555668999999999999999999999999
Q ss_pred cCCCccEEEECCC--CCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCC-CC-CCCCCCChhh
Q 024125 92 FNGKLNILVNNVG--TNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV-GG-LSHVGSGSIY 167 (272)
Q Consensus 92 ~~~~id~li~~ag--~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~-~~-~~~~~~~~~Y 167 (272)
+ +++|+|||||| .....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||. .. ..+.++...|
T Consensus 83 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y 161 (264)
T 3i4f_A 83 F-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAF 161 (264)
T ss_dssp H-SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred h-CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchh
Confidence 9 69999999999 555677888999999999999999999999999999998888999999998 43 5566778999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+++|+++++.|++++||+|++|+||+++|++...... +.........|.+++.+|+|+|+++++|+++...+
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~ 239 (264)
T 3i4f_A 162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQ--EARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDM 239 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHH--HHHHC--------CCCCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccH--HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCC
Confidence 9999999999999999999999999999999999999765432 23333445678899999999999999999999999
Q ss_pred ccccEEEeCCCcCCCCCCC
Q 024125 248 ITGQIISVDGGFTANGFNP 266 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~~~~ 266 (272)
+||++|++|||++...+|.
T Consensus 240 itG~~i~vdGG~~~~~~~~ 258 (264)
T 3i4f_A 240 ITGTIIEVTGAVDVIHREG 258 (264)
T ss_dssp CCSCEEEESCSCCCCC---
T ss_pred CCCcEEEEcCceeeccCCc
Confidence 9999999999999887664
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-48 Score=324.03 Aligned_cols=243 Identities=32% Similarity=0.424 Sum_probs=216.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.++++++++++.+++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF- 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc-
Confidence 468999999999999999999999999999999999998877766554 3467888999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||++
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 157 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG 157 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence 68999999999877778888999999999999999999999999999988777999999999999888999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCC-CHHHHHHHHHHHhcCCCCCccccE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVG-EPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
++.|+++++.|++++||+||+|+||+++|++....... .........|.+++. +|+|+|+.+++|+++...+++|++
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~ 235 (254)
T 1hdc_A 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR--QGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE 235 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC--CSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh--HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCE
Confidence 99999999999999999999999999999997653211 111122335677888 999999999999998889999999
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
+.+|||+++.
T Consensus 236 ~~vdgG~~~~ 245 (254)
T 1hdc_A 236 LAVDGGWTTG 245 (254)
T ss_dssp EEESTTTTTS
T ss_pred EEECCCcccc
Confidence 9999998763
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-48 Score=327.76 Aligned_cols=240 Identities=23% Similarity=0.328 Sum_probs=199.7
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+.|++++|++|||||++|||++++++|+++|++|++++|+.+... + ..+.++.++.+|++|.++++++++.+.+
T Consensus 3 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (257)
T 3tl3_A 3 GSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---A---DLGDRARFAAADVTDEAAVASALDLAET 76 (257)
T ss_dssp -------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---H---HTCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---H---hcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999655432 2 2245788999999999999999998877
Q ss_pred HcCCCccEEEECCCCCCCCC----CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc--------CCCCeEEEecCCCCC
Q 024125 91 KFNGKLNILVNNVGTNIRKP----TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA--------SGVGSIVFISSVGGL 158 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~~~g~ii~vsS~~~~ 158 (272)
+ +++|++|||||+....+ ..+.+.++|++++++|+.+++.++++++|+|.+ ++.|+||++||..+.
T Consensus 77 -~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 154 (257)
T 3tl3_A 77 -M-GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF 154 (257)
T ss_dssp -H-SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred -h-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence 7 79999999999754322 234789999999999999999999999999987 566899999999999
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC-CCCCCHHHHHHHH
Q 024125 159 SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLV 237 (272)
Q Consensus 159 ~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~a~~~ 237 (272)
.+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.... .++.........|. +++.+|+|+|+++
T Consensus 155 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~r~~~p~dva~~v 232 (257)
T 3tl3_A 155 DGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPDEYGALA 232 (257)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHHHHHHHH
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc--cHHHHHHHHhcCCCCCCccCHHHHHHHH
Confidence 98888999999999999999999999999999999999999999998765 23445556667787 8999999999999
Q ss_pred HHHhcCCCCCccccEEEeCCCcCCC
Q 024125 238 AYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+||+++ .++||++|.+|||+++.
T Consensus 233 ~~l~s~--~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 233 VHIIEN--PMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp HHHHHC--TTCCSCEEEESTTC---
T ss_pred HHHhcC--CCCCCCEEEECCCccCC
Confidence 999976 79999999999999875
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-47 Score=330.33 Aligned_cols=242 Identities=24% Similarity=0.301 Sum_probs=218.8
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHH-hCCCeEEEEEecCCCHH-------------
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQ-SKGFVVSGSVCDAASPD------------- 79 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------- 79 (272)
+++|++|||||++|||+++++.|+++|++|++++ |+.+.++++.+++. ..+.++.++.+|++|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 7899999999999999999999999999999999 99999888888876 45668889999999999
Q ss_pred ----HHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCC--------------HHHHHHHHHHHhHHHHHHHHHHHHHH
Q 024125 80 ----QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYS--------------AEEYSKIMTTNFESTYHLCQLVYPLL 141 (272)
Q Consensus 80 ----~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~~~~~~ 141 (272)
+++++++++.+.+ +++|+||||||+....++.+.+ .++|++++++|+.+++.++++++|+|
T Consensus 124 ~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 202 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 202 (328)
T ss_dssp CHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 6999999999987777888888 89999999999999999999999999
Q ss_pred HcCC------CCeEEEecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHH
Q 024125 142 KASG------VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFV 215 (272)
Q Consensus 142 ~~~~------~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~ 215 (272)
++++ .++||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||+++|++ ... ++..
T Consensus 203 ~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~---~~~~ 278 (328)
T 2qhx_A 203 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP---PAVW 278 (328)
T ss_dssp HHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---HHHH
T ss_pred HhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---HHHH
Confidence 8876 78999999999999999999999999999999999999999999999999999999998 322 3444
Q ss_pred HHHHhcCCCC-CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 216 DKVIARTPLQ-RVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 216 ~~~~~~~~~~-~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
.......|.+ ++.+|+|+|++++||+++...+++|++|.+|||+++
T Consensus 279 ~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 325 (328)
T 2qhx_A 279 EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325 (328)
T ss_dssp HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence 4555667888 899999999999999998899999999999999865
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-47 Score=321.98 Aligned_cols=243 Identities=28% Similarity=0.387 Sum_probs=222.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|++|||||++|||++++++|+++|++|++ ..|+.+..++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 578899999999999999999999999999865 5678888888888888888889999999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK-ASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||.....++.+.+.++|++.+++|+.+++++++.+++.|. +++.++||++||..+..+.++...|++||
T Consensus 103 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (267)
T 4iiu_A 103 -GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAK 181 (267)
T ss_dssp -CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred -CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHH
Confidence 7999999999998888888999999999999999999999999998886 56678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+|+++|+++++.|++++||+|++|+||+++|++.... ++.........|.+++.+|+|+|+++.||+++...++||+
T Consensus 182 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~ 258 (267)
T 4iiu_A 182 AGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQ 258 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCC
Confidence 9999999999999999999999999999999997543 4455666778899999999999999999999999999999
Q ss_pred EEEeCCCcC
Q 024125 252 IISVDGGFT 260 (272)
Q Consensus 252 ~i~~dgG~~ 260 (272)
+|.+|||+.
T Consensus 259 ~i~vdGG~~ 267 (267)
T 4iiu_A 259 VISINGGML 267 (267)
T ss_dssp EEEESTTCC
T ss_pred EEEeCCCcC
Confidence 999999974
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=324.88 Aligned_cols=251 Identities=22% Similarity=0.241 Sum_probs=215.7
Q ss_pred cCCCCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
+....++++|++|||||+ +|||++++++|+++|++|++++|+....+. .+++.....++.++.+|++|.++++++++
T Consensus 6 ~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 6 HHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp ---CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred CCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHHcCCcEEEECCCCCHHHHHHHHH
Confidence 345677899999999999 999999999999999999999998544433 33443333457889999999999999999
Q ss_pred HHHHHcCCCccEEEECCCCCCC----CCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC
Q 024125 87 EVGSKFNGKLNILVNNVGTNIR----KPTIE-YSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV 161 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~ 161 (272)
++.+++ +++|++|||||+... .++.+ .+.++|++++++|+.++++++++++|+|++ .++||++||..+..+.
T Consensus 85 ~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~ 161 (271)
T 3ek2_A 85 SLKTHW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAI 161 (271)
T ss_dssp HHHHHC-SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBC
T ss_pred HHHHHc-CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCC
Confidence 999999 699999999998654 55565 899999999999999999999999999975 4799999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
++...|++||+|+++|+++++.|++++||+|++|+||+++|++.......++.........|.+++.+|+|+|+.++||+
T Consensus 162 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~ 241 (271)
T 3ek2_A 162 PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLL 241 (271)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999997765444556666777889999999999999999999
Q ss_pred cCCCCCccccEEEeCCCcCCCC
Q 024125 242 LPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
++...++||++|++|||+++..
T Consensus 242 s~~~~~~tG~~i~vdgG~~~~~ 263 (271)
T 3ek2_A 242 SDLASGVTAEVMHVDSGFNAVV 263 (271)
T ss_dssp SGGGTTCCSEEEEESTTGGGBC
T ss_pred CcccCCeeeeEEEECCCeeeeh
Confidence 9989999999999999998764
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=326.46 Aligned_cols=237 Identities=23% Similarity=0.293 Sum_probs=209.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-------HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-------LNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 85 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.++ +++..+++...+.++.++.+|++|.+++++++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 67899999999999999999999999999999999998753 56666677666789999999999999999999
Q ss_pred HHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC--CCC
Q 024125 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--VGS 163 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~--~~~ 163 (272)
+++.+++ +++|++|||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+ .++
T Consensus 82 ~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~ 160 (274)
T 3e03_A 82 AATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA 160 (274)
T ss_dssp HHHHHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH
T ss_pred HHHHHHc-CCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC
Confidence 9999999 6999999999998888888999999999999999999999999999999888899999999998887 677
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCC-cccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW-YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
...|++||+|+++|+++++.|++++||+||+|+|| +++|++..... ..+..+..+|+|+|++++||++
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~-----------~~~~~~~~~pedvA~~v~~l~s 229 (274)
T 3e03_A 161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP-----------GVDAAACRRPEIMADAAHAVLT 229 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CCCGGGSBCTHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc-----------cccccccCCHHHHHHHHHHHhC
Confidence 88999999999999999999999999999999999 69999873321 1234457799999999999999
Q ss_pred CCCCCccccEEEeCCCcCCC
Q 024125 243 PAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~~ 262 (272)
+...++||++| +|||.+..
T Consensus 230 ~~~~~itG~~i-~~~g~~~~ 248 (274)
T 3e03_A 230 REAAGFHGQFL-IDDEVLAQ 248 (274)
T ss_dssp SCCTTCCSCEE-EHHHHHHH
T ss_pred ccccccCCeEE-EcCcchhh
Confidence 99999999999 78775543
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-46 Score=314.89 Aligned_cols=252 Identities=28% Similarity=0.392 Sum_probs=227.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|++|||||++|||++++++|+++|++|++++| +.+..+++.+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999999 8888888888887767788899999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||
T Consensus 84 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 162 (261)
T 1gee_A 84 -GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK 162 (261)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHH
Confidence 6899999999987777788889999999999999999999999999998876 68999999999998889999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.++.++||+|++++||++.|++.......+..........|.+++.+|+|+|+.+++|+++...+++|+
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 242 (261)
T 1gee_A 163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242 (261)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCc
Confidence 99999999999999999999999999999999987654344445555556788889999999999999999888899999
Q ss_pred EEEeCCCcCCC-CCCC
Q 024125 252 IISVDGGFTAN-GFNP 266 (272)
Q Consensus 252 ~i~~dgG~~~~-~~~~ 266 (272)
++.+|||+++. .+..
T Consensus 243 ~~~v~gg~~~~~~~~~ 258 (261)
T 1gee_A 243 TLFADGGMTLYPSFQA 258 (261)
T ss_dssp EEEESTTGGGCGGGGG
T ss_pred EEEEcCCcccCCCCCC
Confidence 99999998875 3433
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-47 Score=318.09 Aligned_cols=243 Identities=30% Similarity=0.461 Sum_probs=201.7
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+..+.++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++. .++.++.+|+++.++++++++++
T Consensus 6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHTC
T ss_pred ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHhc
Confidence 345667899999999999999999999999999999999999999888877664 46788899999999988887654
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|+
T Consensus 83 -----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 157 (249)
T 3f9i_A 83 -----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYC 157 (249)
T ss_dssp -----SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHH
T ss_pred -----CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhH
Confidence 589999999998877777788889999999999999999999999999888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+|+++|+++++.|++++||+|++++||+++|++.... .+..........+.+++.+|+|+++++.+|+++...++
T Consensus 158 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~ 235 (249)
T 3f9i_A 158 ASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYI 235 (249)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C--CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence 9999999999999999999999999999999999998765 34455666677899999999999999999999989999
Q ss_pred cccEEEeCCCcCC
Q 024125 249 TGQIISVDGGFTA 261 (272)
Q Consensus 249 ~G~~i~~dgG~~~ 261 (272)
+|++|++|||+++
T Consensus 236 tG~~~~vdgG~~~ 248 (249)
T 3f9i_A 236 TGQTLHVNGGMLM 248 (249)
T ss_dssp CSCEEEESTTSSC
T ss_pred cCcEEEECCCEee
Confidence 9999999999875
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-47 Score=320.01 Aligned_cols=239 Identities=28% Similarity=0.332 Sum_probs=212.5
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+|++|||||++|||++++++|+++| +.|++++|+.+.++++.+++ +.++.++.+|++|.++++++++++.+++ +
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 77 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH-G 77 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH-S
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc-C
Confidence 7999999999999999999999985 68999999999888877765 3578889999999999999999999999 7
Q ss_pred CccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 95 KLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 95 ~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|+|++++ |+||++||..+..+.++...|++||++
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a 156 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAA 156 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHH
Confidence 999999999985 447888999999999999999999999999999998866 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC-C
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA-A 245 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~-~ 245 (272)
+++|+++++.|+ ++|+||+|+||+++|+|...... .++....+....|.+++.+|+|+|++++||+++. .
T Consensus 157 ~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~ 234 (254)
T 3kzv_A 157 LNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP 234 (254)
T ss_dssp HHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhccc
Confidence 999999999998 68999999999999999765432 2455566667789999999999999999999988 4
Q ss_pred CCccccEEEeCCCcCCC
Q 024125 246 SYITGQIISVDGGFTAN 262 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~ 262 (272)
.++||++|.+|||.+..
T Consensus 235 ~~itG~~i~vdg~~~~~ 251 (254)
T 3kzv_A 235 DGVNGQYLSYNDPALAD 251 (254)
T ss_dssp GGGTTCEEETTCGGGGG
T ss_pred CCCCccEEEecCccccc
Confidence 99999999999998754
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-47 Score=321.11 Aligned_cols=242 Identities=24% Similarity=0.288 Sum_probs=211.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhC-CCeEEEEEecCCCH----HHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSK-GFVVSGSVCDAASP----DQREKLIQE 87 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~~ 87 (272)
++++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++... +.++.++.+|++|. +++++++++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence 468999999999999999999999999999999999 888888888887654 56788999999999 999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCH-----------HHHHHHHHHHhHHHHHHHHHHHHHHHcCCC------CeEE
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSA-----------EEYSKIMTTNFESTYHLCQLVYPLLKASGV------GSIV 150 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~------g~ii 150 (272)
+.+.+ +++|+||||||+....++.+.+. ++|++.+++|+.++++++++++|+|+ ++. ++||
T Consensus 88 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv 165 (276)
T 1mxh_A 88 SFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVV 165 (276)
T ss_dssp HHHHH-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred HHHhc-CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEE
Confidence 99998 68999999999877777888888 99999999999999999999999997 555 8999
Q ss_pred EecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCC-CCC
Q 024125 151 FISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQR-VGE 229 (272)
Q Consensus 151 ~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 229 (272)
++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+ ... .++.........|.++ +.+
T Consensus 166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~--~~~~~~~~~~~~p~~r~~~~ 241 (276)
T 1mxh_A 166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAM--PQETQEEYRRKVPLGQSEAS 241 (276)
T ss_dssp EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSS--CHHHHHHHHTTCTTTSCCBC
T ss_pred EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccC--CHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999 222 2344444555678888 899
Q ss_pred HHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 230 PEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 230 ~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
|+|+++.+++|+++...+++|++|.+|||+++
T Consensus 242 ~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~ 273 (276)
T 1mxh_A 242 AAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273 (276)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence 99999999999998889999999999999865
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=319.00 Aligned_cols=239 Identities=28% Similarity=0.350 Sum_probs=196.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|++|||||++|||++++++|+++|++|++++|+.+. ... .+..+.+|++|.++++++++++.+++
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY--PFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC--SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC--CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56889999999999999999999999999999999998652 111 26778999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++||+
T Consensus 73 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (250)
T 2fwm_X 73 -ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA 151 (250)
T ss_dssp -SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence 6899999999988778888999999999999999999999999999998877799999999999999899999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHH-HHHh-------cCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVD-KVIA-------RTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
+++.|+++++.|++++||+||+|+||+++|++........+... .+.. ..|.+++.+|+|+|+++++|+++.
T Consensus 152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 231 (250)
T 2fwm_X 152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL 231 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999998754321111111 2222 457788899999999999999988
Q ss_pred CCCccccEEEeCCCcCCC
Q 024125 245 ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~ 262 (272)
..+++|++|.+|||++++
T Consensus 232 ~~~~tG~~i~vdGG~~~~ 249 (250)
T 2fwm_X 232 ASHITLQDIVVDGGSTLG 249 (250)
T ss_dssp GTTCCSCEEEESTTTTTT
T ss_pred ccCCCCCEEEECCCcccC
Confidence 899999999999998754
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-47 Score=317.84 Aligned_cols=239 Identities=30% Similarity=0.501 Sum_probs=204.4
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+...++++|++|||||++|||++++++|+++|++|++++|+.++.++ +..+.+|++|.++++++++++.
T Consensus 8 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~ 76 (247)
T 1uzm_A 8 GAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVE 76 (247)
T ss_dssp -CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHH
T ss_pred cccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHH
Confidence 34556889999999999999999999999999999999998754321 1137899999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+.+ +++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+.++...|++
T Consensus 77 ~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 155 (247)
T 1uzm_A 77 EHQ-GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAA 155 (247)
T ss_dssp HHH-SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHH
Confidence 998 6899999999998777888899999999999999999999999999999888899999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
||++++.|+++++.|++++||+||+|+||+++|++.... .+..........|.+++.+|+|+|+.+.+|+++...+++
T Consensus 156 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~ 233 (247)
T 1uzm_A 156 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYIS 233 (247)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCc
Confidence 999999999999999999999999999999999997654 233344455567888999999999999999998889999
Q ss_pred ccEEEeCCCcCCC
Q 024125 250 GQIISVDGGFTAN 262 (272)
Q Consensus 250 G~~i~~dgG~~~~ 262 (272)
|++|.+|||+++.
T Consensus 234 G~~i~vdgG~~~~ 246 (247)
T 1uzm_A 234 GAVIPVDGGMGMG 246 (247)
T ss_dssp SCEEEESTTTTC-
T ss_pred CCEEEECCCcccC
Confidence 9999999998753
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-47 Score=320.77 Aligned_cols=240 Identities=29% Similarity=0.418 Sum_probs=212.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++. .++.++.+|++|.++++++++++.+++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~- 78 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE---AEAIAVVADVSDPKAVEAVFAEALEEF- 78 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC---SSEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999999988777665542 468889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++++++|+.++++++++++|+| ++ .++||++||..+. +.++...|++||++
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a 155 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLG 155 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHH
Confidence 799999999998877788889999999999999999999999999999 54 6899999999988 77778899999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+++|+++++.|++++||+||+|+||+++|++.... .+..........|.+++.+|+|+|+.+++|+++...+++|+++
T Consensus 156 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i 233 (263)
T 2a4k_A 156 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQAL 233 (263)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEE
Confidence 99999999999999999999999999999997653 2333444556678899999999999999999988999999999
Q ss_pred EeCCCcCCC
Q 024125 254 SVDGGFTAN 262 (272)
Q Consensus 254 ~~dgG~~~~ 262 (272)
.+|||+++.
T Consensus 234 ~vdgG~~~~ 242 (263)
T 2a4k_A 234 YVDGGRSIV 242 (263)
T ss_dssp EESTTTTTC
T ss_pred EECCCcccc
Confidence 999998765
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=321.58 Aligned_cols=249 Identities=26% Similarity=0.298 Sum_probs=215.5
Q ss_pred CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+++++|++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+.++.+|++|.++++++++++.+
T Consensus 4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (261)
T 2wyu_A 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 45789999999999 99999999999999999999999875 3334444443222367889999999999999999999
Q ss_pred HcCCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 91 KFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
++ +++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|+|++ .|+||++||..+..+.++...
T Consensus 83 ~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~ 159 (261)
T 2wyu_A 83 AF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNV 159 (261)
T ss_dssp HH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHH
T ss_pred Hc-CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchH
Confidence 99 699999999998653 67778899999999999999999999999999864 389999999999888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|++||++++.|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+|+.+.+|+++...
T Consensus 160 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~ 239 (261)
T 2wyu_A 160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLAS 239 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhc
Confidence 99999999999999999999999999999999999998754322233444555667889999999999999999998889
Q ss_pred CccccEEEeCCCcCCCCCC
Q 024125 247 YITGQIISVDGGFTANGFN 265 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~~~~ 265 (272)
+++|+++++|||+++.+.+
T Consensus 240 ~~tG~~~~vdgG~~~~~~~ 258 (261)
T 2wyu_A 240 GITGEVVYVDAGYHIMGME 258 (261)
T ss_dssp TCCSCEEEESTTGGGBC--
T ss_pred CCCCCEEEECCCccccCCC
Confidence 9999999999999887654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=319.84 Aligned_cols=247 Identities=30% Similarity=0.420 Sum_probs=214.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++. .+.++.+|++|.++++++++++.+++
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999988777665542 37788999999999999999999999
Q ss_pred CCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|+++ .++||++||..+..+.++...|++||
T Consensus 81 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK 158 (270)
T 1yde_A 81 -GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATK 158 (270)
T ss_dssp -SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHH
Confidence 69999999999864 4677888999999999999999999999999999765 48999999998888888899999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CH-HHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NK-EFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+++++|+++++.|++++||+||+|+||+++|++...... .. ..........|.+++.+|+|+|+.+.||+++ ..+
T Consensus 159 aa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~~ 237 (270)
T 1yde_A 159 GAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANF 237 (270)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTT
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CCC
Confidence 999999999999999999999999999999999765422 11 1122223457889999999999999999997 789
Q ss_pred ccccEEEeCCCcCCCCCCC
Q 024125 248 ITGQIISVDGGFTANGFNP 266 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~~~~ 266 (272)
+||++|.+|||+++..-..
T Consensus 238 itG~~i~vdGG~~~~~~~~ 256 (270)
T 1yde_A 238 CTGIELLVTGGAELGYGCK 256 (270)
T ss_dssp CCSCEEEESTTTTSCC---
T ss_pred cCCCEEEECCCeecccCcC
Confidence 9999999999998874433
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=316.21 Aligned_cols=242 Identities=31% Similarity=0.421 Sum_probs=216.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|++|||||++|||++++++|+++|++|++++|+.+. +.++.++.+|++|.++++++++++.+++
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999998654 3467788999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||+
T Consensus 73 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (264)
T 2dtx_A 73 -GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKH 151 (264)
T ss_dssp -SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHH
Confidence 6899999999988778888999999999999999999999999999998887899999999999999899999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-----CH----HHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-----NK----EFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
+++.|+++++.|+++. |+||+|+||+++|++...... .+ +.........|.+++.+|+|+|+++++|+++
T Consensus 152 a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~ 230 (264)
T 2dtx_A 152 AVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASR 230 (264)
T ss_dssp HHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999988 999999999999999765421 22 3334444557888999999999999999998
Q ss_pred CCCCccccEEEeCCCcCCCCCCCC
Q 024125 244 AASYITGQIISVDGGFTANGFNPG 267 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~~~~~~~ 267 (272)
...+++|+++.+|||+.+......
T Consensus 231 ~~~~~tG~~i~vdGG~~~~~p~~~ 254 (264)
T 2dtx_A 231 EASFITGTCLYVDGGLSIRAPIST 254 (264)
T ss_dssp GGTTCCSCEEEESTTGGGCCCCCC
T ss_pred hhcCCCCcEEEECCCcccCCCCCC
Confidence 889999999999999887755443
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=316.32 Aligned_cols=239 Identities=20% Similarity=0.213 Sum_probs=200.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|.++++++++++.+.
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 4678999999999999999999999999999999999999999999999888889999999999999999999999887
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+
T Consensus 82 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 160 (252)
T 3h7a_A 82 -APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKF 160 (252)
T ss_dssp -SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHH
T ss_pred -CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHH
Confidence 5899999999998888889999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeE-EEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 173 AMNQLTRNLACEWAKDNIRT-NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v-~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
|+++|+++++.|++++||+| |+|+||+++|++...... +.........|.+ +.+|+|+|++++||+++...+++|+
T Consensus 161 a~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~~~~ 237 (252)
T 3h7a_A 161 GLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE--QMFGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAWTFE 237 (252)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHHHHHHHHHHHHHCCGGGBCSE
T ss_pred HHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch--hhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhcceee
Confidence 99999999999999999999 999999999999876532 2233344445666 8999999999999999888899999
Q ss_pred EEEeC
Q 024125 252 IISVD 256 (272)
Q Consensus 252 ~i~~d 256 (272)
.....
T Consensus 238 i~~~~ 242 (252)
T 3h7a_A 238 MEIRP 242 (252)
T ss_dssp EEEBC
T ss_pred EEeee
Confidence 76543
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=321.16 Aligned_cols=251 Identities=29% Similarity=0.388 Sum_probs=208.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH---HhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW---QSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ ...+.++.++.+|++|.++++++++++.+
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999888888777 33345788899999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC-CCCCCCCh
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEY----SAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGS 165 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~-~~~~~~~~ 165 (272)
++ +++|+||||||.....++.+. +.++|++.+++|+.++++++++++|+|++++ ++||++||..+ ..+.++..
T Consensus 83 ~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~ 160 (278)
T 1spx_A 83 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP 160 (278)
T ss_dssp HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred Hc-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCcc
Confidence 99 689999999998766777777 9999999999999999999999999998766 89999999998 88888899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHH------HHHHHhcCCCCCCCCHHHHHHHHH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEF------VDKVIARTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~e~a~~~~ 238 (272)
.|++||++++.|+++++.|++++||+||+|+||+++|++...... .+.. ........|.+++.+|+|+|+.+.
T Consensus 161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~ 240 (278)
T 1spx_A 161 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA 240 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999998654211 1111 333445578889999999999999
Q ss_pred HHhcCCCCC-ccccEEEeCCCcCCCCCCC
Q 024125 239 YLCLPAASY-ITGQIISVDGGFTANGFNP 266 (272)
Q Consensus 239 ~l~~~~~~~-~~G~~i~~dgG~~~~~~~~ 266 (272)
+|+++...+ ++|+++.+|||+.+..-+.
T Consensus 241 ~l~s~~~~~~~tG~~~~vdgG~~~~~~~~ 269 (278)
T 1spx_A 241 FLADRKTSSYIIGHQLVVDGGSSLIMGLH 269 (278)
T ss_dssp HHHCHHHHTTCCSCEEEESTTGGGC----
T ss_pred HHcCccccCcccCcEEEECCCcccccCcc
Confidence 999877776 9999999999988765443
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-46 Score=311.32 Aligned_cols=235 Identities=37% Similarity=0.564 Sum_probs=210.9
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++|||||++|||++++++|+++|++|++++|+.++. .+++ + +..+.+|+++ ++++++++++.+.+ +++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~-g~i 71 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL---G--AVPLPTDLEK-DDPKGLVKRALEAL-GGL 71 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH---T--CEEEECCTTT-SCHHHHHHHHHHHH-TSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh---C--cEEEecCCch-HHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999998762 2333 2 6678999999 99999999999988 689
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC--CCChhhHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--GSGSIYGATKAAM 174 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~--~~~~~Y~~sK~a~ 174 (272)
|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+. ++...|++||+++
T Consensus 72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~ 151 (239)
T 2ekp_A 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL 151 (239)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence 99999999887788889999999999999999999999999999988777999999999988877 8889999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
+.|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+|+.+.+|+++...+++|+++.
T Consensus 152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~ 231 (239)
T 2ekp_A 152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVA 231 (239)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence 99999999999999999999999999999976553334445555666788899999999999999999888999999999
Q ss_pred eCCCcCC
Q 024125 255 VDGGFTA 261 (272)
Q Consensus 255 ~dgG~~~ 261 (272)
+|||+++
T Consensus 232 vdgG~~~ 238 (239)
T 2ekp_A 232 VDGGFLA 238 (239)
T ss_dssp ESTTTTT
T ss_pred ECCCccc
Confidence 9999764
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=325.07 Aligned_cols=246 Identities=24% Similarity=0.306 Sum_probs=218.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.++++|++|||||++|||++++++|+++|+ +|++++|+.+.++++.+++... +.++.++.+|++|.+++++++++
T Consensus 29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 357899999999999999999999999998 9999999999999998888764 56899999999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 88 VGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
+.+++ +++|+||||||... ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+.++...
T Consensus 109 ~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~ 187 (287)
T 3rku_A 109 LPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSI 187 (287)
T ss_dssp SCGGG-CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHH
T ss_pred HHHhc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCch
Confidence 99998 69999999999864 67788999999999999999999999999999999888899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
|++||+|+++|+++++.|++++||+||+|+||+++|++...... ..+...... ......+|+|+|++++||+++..
T Consensus 188 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~---~~~~p~~pedvA~~v~~l~s~~~ 264 (287)
T 3rku_A 188 YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVY---KDTTPLMADDVADLIVYATSRKQ 264 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHH---TTSCCEEHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhh---cccCCCCHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999754332 222222211 12233489999999999999999
Q ss_pred CCccccEEEeCCCcCCC
Q 024125 246 SYITGQIISVDGGFTAN 262 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~ 262 (272)
.+++|+.+.+|+|...+
T Consensus 265 ~~i~g~~i~v~~g~~~p 281 (287)
T 3rku_A 265 NTVIADTLIFPTNQASP 281 (287)
T ss_dssp TEEEEEEEEEETTEEET
T ss_pred CeEecceEEeeCCCCCC
Confidence 99999999999998765
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=311.32 Aligned_cols=251 Identities=35% Similarity=0.525 Sum_probs=225.0
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+.+++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++...+.++.++.+|++|.++++++++++.
T Consensus 6 ~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 6 MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp TGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 44577899999999999999999999999999999999999988888888887767789999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC--hh
Q 024125 90 SKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SI 166 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~--~~ 166 (272)
+++ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++. ..
T Consensus 86 ~~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~ 164 (260)
T 3awd_A 86 EQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAA 164 (260)
T ss_dssp HHH-SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHH
T ss_pred HHc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccc
Confidence 998 68999999999866 667788899999999999999999999999999988777999999999888776666 89
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|++||++++.|+++++.|++++||+|++++||++.|++.......+..........|.+++.+|+|+++++.+++++...
T Consensus 165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 244 (260)
T 3awd_A 165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAAS 244 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhc
Confidence 99999999999999999999999999999999999999762222344455555667888899999999999999998888
Q ss_pred CccccEEEeCCCcCC
Q 024125 247 YITGQIISVDGGFTA 261 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~ 261 (272)
+++|+++++|||+.+
T Consensus 245 ~~~G~~~~v~gg~~~ 259 (260)
T 3awd_A 245 LMTGAIVNVDAGFTV 259 (260)
T ss_dssp TCCSCEEEESTTTTT
T ss_pred cCCCcEEEECCceec
Confidence 999999999999764
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=318.58 Aligned_cols=254 Identities=63% Similarity=1.034 Sum_probs=199.8
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+.+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|+++.++++++++++.
T Consensus 7 ~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 7 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 35577899999999999999999999999999999999999998888888887777788899999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+.+++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++
T Consensus 87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~ 166 (266)
T 1xq1_A 87 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSA 166 (266)
T ss_dssp HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHH
T ss_pred HHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHH
Confidence 88845899999999987777888889999999999999999999999999998877799999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
||++++.|+++++.+++++||+|++++||++.|++..... .+..........|.+++.+|+|+++.+.+|+++...+++
T Consensus 167 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~ 245 (266)
T 1xq1_A 167 TKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYIT 245 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence 9999999999999999999999999999999999976543 122233334456777889999999999999998889999
Q ss_pred ccEEEeCCCcCCCCC
Q 024125 250 GQIISVDGGFTANGF 264 (272)
Q Consensus 250 G~~i~~dgG~~~~~~ 264 (272)
|+++.+|||+.+.++
T Consensus 246 G~~~~v~gG~~~~~~ 260 (266)
T 1xq1_A 246 GQTICVDGGLTVNGF 260 (266)
T ss_dssp SCEEECCCCEEETTE
T ss_pred CcEEEEcCCcccccc
Confidence 999999999987643
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=317.64 Aligned_cols=244 Identities=23% Similarity=0.310 Sum_probs=206.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+ +
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g 80 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-G 80 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 578999999999999999999999999999999999999999999998888899999999999999999999999999 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+|+
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 160 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV 160 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence 99999999999888889999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
++|+++++.|+ + ||+||+|+||+++|++......... .... ........+|+|+|++++||+++...+.+|+.+.
T Consensus 161 ~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~--~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i 235 (264)
T 3tfo_A 161 RAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEET-MAAM--DTYRAIALQPADIARAVRQVIEAPQSVDTTEITI 235 (264)
T ss_dssp HHHHHHHHHHC-S-SEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred HHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhH-HHHH--HhhhccCCCHHHHHHHHHHHhcCCccCccceEEE
Confidence 99999999998 4 9999999999999999765432211 1100 0112235799999999999999999999999999
Q ss_pred eCCCcCCCCC
Q 024125 255 VDGGFTANGF 264 (272)
Q Consensus 255 ~dgG~~~~~~ 264 (272)
.++|+.+...
T Consensus 236 ~p~~~~~~~~ 245 (264)
T 3tfo_A 236 RPTASGNAEN 245 (264)
T ss_dssp EECC------
T ss_pred ecCccccccC
Confidence 9999877643
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=320.87 Aligned_cols=242 Identities=31% Similarity=0.456 Sum_probs=202.2
Q ss_pred cccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHH
Q 024125 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 7 ~~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
+.+.+.+++++|++|||||++|||++++++|+++|++|++++|+.++++ .+..+.+|++|.++++++++
T Consensus 11 ~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~ 79 (253)
T 2nm0_A 11 SSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYK 79 (253)
T ss_dssp ---------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHH
T ss_pred CCCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHH
Confidence 3455567788999999999999999999999999999999999865432 25678999999999999999
Q ss_pred HHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
++.+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...
T Consensus 80 ~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~ 158 (253)
T 2nm0_A 80 EIEETH-GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQAN 158 (253)
T ss_dssp HHHHHT-CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHH
T ss_pred HHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHH
Confidence 999998 7999999999987777888889999999999999999999999999998877799999999998888778899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|++||++++.|+++++.|++++||+||+|+||+++|++..... ++.........|.+++.+|+|+|+.+.+|+++...
T Consensus 159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~ 236 (253)
T 2nm0_A 159 YAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT--DEQRANIVSQVPLGRYARPEEIAATVRFLASDDAS 236 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 9999999999999999999999999999999999999976432 12233344567888899999999999999998889
Q ss_pred CccccEEEeCCCcCCC
Q 024125 247 YITGQIISVDGGFTAN 262 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~ 262 (272)
+++|++|.+|||+++.
T Consensus 237 ~~tG~~i~vdGG~~~~ 252 (253)
T 2nm0_A 237 YITGAVIPVDGGLGMG 252 (253)
T ss_dssp TCCSCEEEESTTTTCC
T ss_pred CCcCcEEEECCccccC
Confidence 9999999999998763
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-47 Score=316.75 Aligned_cols=237 Identities=21% Similarity=0.267 Sum_probs=206.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--C-CeEEEEEecCCCHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--G-FVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... + .++.++.+|++|.++++++++++.
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999988888654 2 678889999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+++ +++|++|||||+....++ +.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++
T Consensus 83 ~~~-g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 160 (250)
T 3nyw_A 83 QKY-GAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGS 160 (250)
T ss_dssp HHH-CCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHH
T ss_pred Hhc-CCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHH
Confidence 999 699999999999777777 778999999999999999999999999999888899999999999887777899999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC-CCCCc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP-AASYI 248 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~-~~~~~ 248 (272)
||+|+++|+++++.|++++||+||+|+||+++|++...... ..+.+++.+|+|+++++.||+++ ...++
T Consensus 161 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----------~~~~~~~~~p~dva~~v~~l~s~~~~~~~ 230 (250)
T 3nyw_A 161 TKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT----------PFKDEEMIQPDDLLNTIRCLLNLSENVCI 230 (250)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC----------CSCGGGSBCHHHHHHHHHHHHTSCTTEEC
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC----------CcccccCCCHHHHHHHHHHHHcCCCceEe
Confidence 99999999999999999999999999999999999765432 24566788999999999999984 45577
Q ss_pred cccEEEeCCCcCC
Q 024125 249 TGQIISVDGGFTA 261 (272)
Q Consensus 249 ~G~~i~~dgG~~~ 261 (272)
++.+|.+|||...
T Consensus 231 ~~~~i~vd~~~~~ 243 (250)
T 3nyw_A 231 KDIVFEMKKSIIE 243 (250)
T ss_dssp CEEEEEEHHHHHC
T ss_pred eEEEEEeeccccc
Confidence 7889999999643
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-47 Score=320.03 Aligned_cols=246 Identities=20% Similarity=0.303 Sum_probs=212.7
Q ss_pred CCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++|||||+ +|||++++++|+++|++|++++|+. +.++..+++........++.+|++|.++++++++++.+++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 789999999999 9999999999999999999999987 3444444444322234678999999999999999999998
Q ss_pred CCCccEEEECCCCCCC----CCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 93 NGKLNILVNNVGTNIR----KPTIE-YSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 93 ~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++|+||||||+... .++.+ .+.++|++.+++|+.++++++++++|+|++ .|+||++||..+..+.++...|
T Consensus 86 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y 162 (265)
T 1qsg_A 86 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM 162 (265)
T ss_dssp -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHH
T ss_pred -CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHH
Confidence 689999999998653 56666 889999999999999999999999999964 3799999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||++++.|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+|+++++|+++...+
T Consensus 163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~ 242 (265)
T 1qsg_A 163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG 242 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence 99999999999999999999999999999999999987653222334444555678889999999999999999988899
Q ss_pred ccccEEEeCCCcCCCCC
Q 024125 248 ITGQIISVDGGFTANGF 264 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~~ 264 (272)
++|+++.+|||+.+.++
T Consensus 243 ~tG~~~~vdgG~~~~~~ 259 (265)
T 1qsg_A 243 ISGEVVHVDGGFSIAAM 259 (265)
T ss_dssp CCSCEEEESTTGGGBCS
T ss_pred ccCCEEEECCCcCCCCc
Confidence 99999999999887633
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=314.91 Aligned_cols=238 Identities=26% Similarity=0.402 Sum_probs=208.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.++++++. ++ .++.++.+|++|.+++++++ +.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~----~~~- 72 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQFA----NEV- 72 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHHHH----HHC-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHHHH----HHh-
Confidence 478999999999999999999999999999999999987765543 22 26778899999999987444 345
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC-CChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~-~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.+ +...|++||+
T Consensus 73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~ 152 (246)
T 2ag5_A 73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA 152 (246)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHH
Confidence 689999999998777788889999999999999999999999999999887779999999999888777 8899999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+++.|+++++.|++++||+||+|+||+++|++...... ..+....+....|.+++.+|+|+|+.+.+|+++...++
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~ 232 (246)
T 2ag5_A 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYV 232 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999765221 12334445556788899999999999999999989999
Q ss_pred cccEEEeCCCcCC
Q 024125 249 TGQIISVDGGFTA 261 (272)
Q Consensus 249 ~G~~i~~dgG~~~ 261 (272)
+|++|.+|||+++
T Consensus 233 tG~~i~vdgG~~~ 245 (246)
T 2ag5_A 233 TGNPVIIDGGWSL 245 (246)
T ss_dssp CSCEEEECTTGGG
T ss_pred CCCEEEECCCccC
Confidence 9999999999865
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-47 Score=319.84 Aligned_cols=234 Identities=28% Similarity=0.413 Sum_probs=209.5
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++++|++|||||++|||++++++|+++|++|++++|+.+..+ ..++.++.+|++|+++++++++++.++
T Consensus 23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 93 (260)
T 3un1_A 23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIER 93 (260)
T ss_dssp HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999865422 236788999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC--CCCChhhHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--VGSGSIYGA 169 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~--~~~~~~Y~~ 169 (272)
+ +++|++|||||+....++.+.+.++|++++++|+.|+++++++++|.|++++.++||++||..+..+ ..+...|++
T Consensus 94 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~ 172 (260)
T 3un1_A 94 F-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASL 172 (260)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHH
T ss_pred C-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHH
Confidence 9 6999999999998888888999999999999999999999999999999988899999999877643 445689999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
||+|+++|+++++.|++++||+||+|+||+++|++... +.........|.+++.+|+|+|++++|| +.+.+++
T Consensus 173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~~~~p~~r~~~~~dva~av~~L--~~~~~it 245 (260)
T 3un1_A 173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-----ETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFIT 245 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-----GGHHHHHTTSTTSSCBCHHHHHHHHHHH--HHCTTCC
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-----HHHHHHhccCCCCCCcCHHHHHHHHHHh--cccCCCC
Confidence 99999999999999999999999999999999998643 2234455678999999999999999999 4678999
Q ss_pred ccEEEeCCCcCCC
Q 024125 250 GQIISVDGGFTAN 262 (272)
Q Consensus 250 G~~i~~dgG~~~~ 262 (272)
|++|++|||++++
T Consensus 246 G~~i~vdGG~~~~ 258 (260)
T 3un1_A 246 GEILHVDGGQNAG 258 (260)
T ss_dssp SCEEEESTTGGGC
T ss_pred CcEEEECCCeecc
Confidence 9999999998875
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=314.51 Aligned_cols=238 Identities=33% Similarity=0.443 Sum_probs=215.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.. ++.++.+|++|.++++++++++.+++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~- 79 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF- 79 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc-
Confidence 47899999999999999999999999999999999999888877666543 47788999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++||++
T Consensus 80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 159 (260)
T 1nff_A 80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA 159 (260)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence 68999999999887778888999999999999999999999999999988777999999999999888899999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+++|+++++.|++++||+||+|+||++.|++.. . .... .. ..|.+++.+|+|+|+.+.+|+++...+++|+++
T Consensus 160 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~~~----~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~ 232 (260)
T 1nff_A 160 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VPED----IF-QTALGRAAEPVEVSNLVVYLASDESSYSTGAEF 232 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SCTT----CS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-chhh----HH-hCccCCCCCHHHHHHHHHHHhCccccCCcCCEE
Confidence 999999999999999999999999999999864 2 1111 11 457788899999999999999988899999999
Q ss_pred EeCCCcCCC
Q 024125 254 SVDGGFTAN 262 (272)
Q Consensus 254 ~~dgG~~~~ 262 (272)
.+|||+++.
T Consensus 233 ~v~gG~~~~ 241 (260)
T 1nff_A 233 VVDGGTVAG 241 (260)
T ss_dssp EESTTGGGS
T ss_pred EECCCeecc
Confidence 999998765
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=309.07 Aligned_cols=245 Identities=29% Similarity=0.431 Sum_probs=220.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH-HhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW-QSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ ...+.++.++.+|++|.++++++++++.+++ +
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 79 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-G 79 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence 3689999999999999999999999999999999998888887777 4445578889999999999999999999998 6
Q ss_pred CccEEEECCCCCCCCC---CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 95 KLNILVNNVGTNIRKP---TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 95 ~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
++|+||||||.....+ +.+.+.+++++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 159 (250)
T 2cfc_A 80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSK 159 (250)
T ss_dssp CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHH
Confidence 8999999999866555 7788999999999999999999999999999887779999999999988888999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.|+++++.|+.++||+|++++||++.|++.......+..........|.+++.+|+|+++.+++++++...+++|+
T Consensus 160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 239 (250)
T 2cfc_A 160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGA 239 (250)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCC
Confidence 99999999999999999999999999999999976533334444555666788899999999999999999888999999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
++.+|||+++
T Consensus 240 ~~~v~gG~~~ 249 (250)
T 2cfc_A 240 ALVMDGAYTA 249 (250)
T ss_dssp EEEESTTGGG
T ss_pred EEEECCceec
Confidence 9999999753
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=319.01 Aligned_cols=245 Identities=22% Similarity=0.268 Sum_probs=214.6
Q ss_pred CCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++++|++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+.++.+|++|.++++++++++.+.
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3689999999999 99999999999999999999999876 44444444432224678899999999999999999999
Q ss_pred cCCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 92 FNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+ +++|+||||||+... .++.+.+.++|++++++|+.+++.++++++|+|++ .|+||++||..+..+.++...|
T Consensus 82 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y 158 (275)
T 2pd4_A 82 L-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVM 158 (275)
T ss_dssp T-SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred c-CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhh
Confidence 8 699999999998654 57778899999999999999999999999999965 3899999999999888999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+++++|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+|+.+++|+++...+
T Consensus 159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~ 238 (275)
T 2pd4_A 159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG 238 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccC
Confidence 99999999999999999999999999999999999997654322334445555678899999999999999999988899
Q ss_pred ccccEEEeCCCcCCC
Q 024125 248 ITGQIISVDGGFTAN 262 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~ 262 (272)
++|+++.+|||+.+.
T Consensus 239 ~tG~~~~vdgg~~~~ 253 (275)
T 2pd4_A 239 VSGEVHFVDAGYHVM 253 (275)
T ss_dssp CCSCEEEESTTGGGB
T ss_pred CCCCEEEECCCcccC
Confidence 999999999998774
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-45 Score=308.16 Aligned_cols=246 Identities=32% Similarity=0.502 Sum_probs=220.7
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeE-EEEEecCCCHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV-SGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+.+++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++. .++ .++.+|++|.++++++++++.
T Consensus 5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (254)
T 2wsb_A 5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG---AAVAARIVADVTDAEAMTAAAAEAE 81 (254)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---ccceeEEEEecCCHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999999999988887776662 355 788999999999999999998
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC--hhh
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIY 167 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~--~~Y 167 (272)
+ + +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+.. ..|
T Consensus 82 ~-~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y 159 (254)
T 2wsb_A 82 A-V-APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY 159 (254)
T ss_dssp H-H-SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHH
T ss_pred h-h-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHH
Confidence 8 7 68999999999877778888899999999999999999999999999988878999999999888777777 899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||++++.++++++.++.++||++++++||++.|++.......++.........|.+++.+|+|+|+.+.+++++...+
T Consensus 160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 239 (254)
T 2wsb_A 160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASY 239 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccc
Confidence 99999999999999999999999999999999999998765444455555566678888999999999999999988889
Q ss_pred ccccEEEeCCCcCC
Q 024125 248 ITGQIISVDGGFTA 261 (272)
Q Consensus 248 ~~G~~i~~dgG~~~ 261 (272)
++|+++.+|||+++
T Consensus 240 ~~G~~~~v~gG~~~ 253 (254)
T 2wsb_A 240 VTGAILAVDGGYTV 253 (254)
T ss_dssp CCSCEEEESTTGGG
T ss_pred ccCCEEEECCCEec
Confidence 99999999999763
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=313.66 Aligned_cols=242 Identities=26% Similarity=0.379 Sum_probs=216.5
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++.+|++|.++++++++++ ++
T Consensus 25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~ 100 (281)
T 3ppi_A 25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQ 100 (281)
T ss_dssp CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TT
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HH
Confidence 45789999999999999999999999999999999999999988888776 457889999999999999999999 77
Q ss_pred cCCCccEEEEC-CCCCCCCCC-----CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc------CCCCeEEEecCCCCCC
Q 024125 92 FNGKLNILVNN-VGTNIRKPT-----IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA------SGVGSIVFISSVGGLS 159 (272)
Q Consensus 92 ~~~~id~li~~-ag~~~~~~~-----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~------~~~g~ii~vsS~~~~~ 159 (272)
+ +++|++||| ||......+ .+.+.++|++.+++|+.++++++++++|.|.+ ++.|+||++||..+..
T Consensus 101 ~-~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 179 (281)
T 3ppi_A 101 L-GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE 179 (281)
T ss_dssp S-SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred h-CCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence 7 689999999 555444444 36788999999999999999999999999987 4568999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC-CCCCCHHHHHHHHH
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLVA 238 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~a~~~~ 238 (272)
+.++...|++||+|+++|+++++.|++++||+|++|+||+++|++.... .++.........+. +++.+|+|+|++++
T Consensus 180 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~pedvA~~v~ 257 (281)
T 3ppi_A 180 GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFADAAA 257 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT--CHHHHHHHHHTCCSSSSCBCHHHHHHHHH
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc--cHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998765 34555666677777 88999999999999
Q ss_pred HHhcCCCCCccccEEEeCCCcCCC
Q 024125 239 YLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 239 ~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+|+++ .+++|++|.+|||+.+.
T Consensus 258 ~l~s~--~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 258 FLLTN--GYINGEVMRLDGAQRFT 279 (281)
T ss_dssp HHHHC--SSCCSCEEEESTTCCCC
T ss_pred HHHcC--CCcCCcEEEECCCcccC
Confidence 99974 79999999999998764
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-47 Score=330.72 Aligned_cols=249 Identities=25% Similarity=0.304 Sum_probs=216.8
Q ss_pred cccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC----------hHHHHHHHHHHHhCCCeEEEEEecCC
Q 024125 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN----------EVELNKCLKEWQSKGFVVSGSVCDAA 76 (272)
Q Consensus 7 ~~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~D~~ 76 (272)
.-|.+..+++||++|||||++|||++++++|+++|++|++++|+ .+..++..+++...+.++.++.+|++
T Consensus 17 ~~p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 96 (322)
T 3qlj_A 17 QGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVA 96 (322)
T ss_dssp -----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTT
T ss_pred cCCchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCC
Confidence 33445556899999999999999999999999999999999988 77888888888888889999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC------CCeEE
Q 024125 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG------VGSIV 150 (272)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~g~ii 150 (272)
|.++++++++++.+++ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+.+ .|+||
T Consensus 97 d~~~v~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV 175 (322)
T 3qlj_A 97 DWDQAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRII 175 (322)
T ss_dssp SHHHHHHHHHHHHHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred CHHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEE
Confidence 9999999999999999 6999999999998888889999999999999999999999999999997532 37999
Q ss_pred EecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCH
Q 024125 151 FISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEP 230 (272)
Q Consensus 151 ~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (272)
++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+|| +.|+|......... . ......+..+|
T Consensus 176 ~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~--~---~~~~~~~~~~p 249 (322)
T 3qlj_A 176 NTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM--A---TQDQDFDAMAP 249 (322)
T ss_dssp EECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCG
T ss_pred EEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh--h---ccccccCCCCH
Confidence 999999999999999999999999999999999999999999999999 99998765433211 1 11122345689
Q ss_pred HHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 231 EEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 231 ~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+|++++++||+++...++||++|.+|||+.+.
T Consensus 250 edva~~v~~L~s~~~~~itG~~i~vdGG~~~~ 281 (322)
T 3qlj_A 250 ENVSPLVVWLGSAEARDVTGKVFEVEGGKIRV 281 (322)
T ss_dssp GGTHHHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred HHHHHHHHHHhCccccCCCCCEEEECCCcccc
Confidence 99999999999999999999999999998763
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-46 Score=315.34 Aligned_cols=242 Identities=30% Similarity=0.360 Sum_probs=207.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++|++|||||++|||++++++|+++|++|+++ .|+.+..+++.+++...+.++.++.+|++|.++++++++++.+.+ +
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g 103 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF-G 103 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence 57999999999999999999999999999776 788888888888888888899999999999999999999999999 6
Q ss_pred CccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC---CCCeEEEecCCCCCCCCC-CChhhHH
Q 024125 95 KLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS---GVGSIVFISSVGGLSHVG-SGSIYGA 169 (272)
Q Consensus 95 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~g~ii~vsS~~~~~~~~-~~~~Y~~ 169 (272)
++|+||||||.... .++.+.+.++|++++++|+.++++++++++|.|.+. +.++||++||..+..+.+ +...|++
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a 183 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA 183 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence 99999999998654 778889999999999999999999999999999763 458999999998877655 6788999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
||+|+++|+++++.|++++||+|++|+||+++|++..... .++.........|.+++.+|+|+|+++++|+++...+++
T Consensus 184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~t 262 (272)
T 4e3z_A 184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG-LPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVT 262 (272)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC-ChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCcccccc
Confidence 9999999999999999999999999999999999976522 233445556677889999999999999999999999999
Q ss_pred ccEEEeCCCc
Q 024125 250 GQIISVDGGF 259 (272)
Q Consensus 250 G~~i~~dgG~ 259 (272)
|++|++|||+
T Consensus 263 G~~i~vdgG~ 272 (272)
T 4e3z_A 263 GSILNVSGGR 272 (272)
T ss_dssp SCEEEESTTC
T ss_pred CCEEeecCCC
Confidence 9999999995
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=315.87 Aligned_cols=242 Identities=21% Similarity=0.209 Sum_probs=209.5
Q ss_pred CCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHH-HHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVEL-NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 14 ~l~~k~vlItGa--~~giG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
++++|++||||| ++|||++++++|+++|++|++++|+.++. +++.++ .+.++.++.+|++|.++++++++++.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHHH
Confidence 478999999999 99999999999999999999999987653 444332 234677889999999999999999999
Q ss_pred HcCC---CccEEEECCCCCC-----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC
Q 024125 91 KFNG---KLNILVNNVGTNI-----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG 162 (272)
Q Consensus 91 ~~~~---~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~ 162 (272)
.+ + ++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+++ |+||++||... .+.+
T Consensus 81 ~~-g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~-~~~~ 156 (269)
T 2h7i_A 81 AI-GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS-RAMP 156 (269)
T ss_dssp HH-CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS-SCCT
T ss_pred Hh-CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc-cccC
Confidence 98 6 8999999999865 4677888999999999999999999999999999653 79999999876 6677
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CHH-------HHHHHHhcCCCC-CCCCHH
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NKE-------FVDKVIARTPLQ-RVGEPE 231 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~~-------~~~~~~~~~~~~-~~~~~~ 231 (272)
....|++||+++++|+++++.|++++||+||+|+||+++|++...... ..+ .........|.+ ++.+|+
T Consensus 157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~ 236 (269)
T 2h7i_A 157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT 236 (269)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHH
Confidence 889999999999999999999999999999999999999998765421 111 123344567888 699999
Q ss_pred HHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 232 EVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 232 e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
|+|+++.||+++.+.++||++|.+|||+++.
T Consensus 237 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 267 (269)
T 2h7i_A 237 PVAKTVCALLSDWLPATTGDIIYADGGAHTQ 267 (269)
T ss_dssp HHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred HHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence 9999999999999999999999999998764
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-46 Score=317.76 Aligned_cols=245 Identities=24% Similarity=0.301 Sum_probs=212.9
Q ss_pred CCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+.++.+|++|.++++++++++.+.+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 889999999999 99999999999999999999999875 444444444322236778999999999999999999998
Q ss_pred CCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 93 NGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 93 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|+|+++ .|+||++||..+..+.++...|+
T Consensus 98 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~ 175 (285)
T 2p91_A 98 -GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMG 175 (285)
T ss_dssp -SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHH
T ss_pred -CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHH
Confidence 699999999998653 567788999999999999999999999999999754 48999999999988888899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+++++|+++++.|++++||+||+|+||+++|++.......++.........|.+++.+|+|+|+++++|+++...++
T Consensus 176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~ 255 (285)
T 2p91_A 176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAI 255 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCC
Confidence 99999999999999999999999999999999999865432223334445556788899999999999999999888999
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
+|+++.+|||+.+.
T Consensus 256 tG~~~~vdgg~~~~ 269 (285)
T 2p91_A 256 TGEVVHVDNGYHIM 269 (285)
T ss_dssp CSCEEEESTTGGGB
T ss_pred CCCEEEECCCcccc
Confidence 99999999998775
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=306.58 Aligned_cols=249 Identities=33% Similarity=0.500 Sum_probs=224.8
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+.+++++|++|||||+||||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|++|.++++++++++.+
T Consensus 5 ~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999988888888877677888899999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
++ +++|+||||||.....++ +.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++|
T Consensus 85 ~~-~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 162 (255)
T 1fmc_A 85 KL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS 162 (255)
T ss_dssp HH-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred hc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence 88 689999999998766665 6789999999999999999999999999988777999999999998888899999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|++++.++++++.++.+++|++++++||++.|++..... .+..........|.+++.+|+|+++++.+++++...+++|
T Consensus 163 K~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G 241 (255)
T 1fmc_A 163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSG 241 (255)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc-ChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCC
Confidence 999999999999999999999999999999999876542 2444455566678889999999999999999988889999
Q ss_pred cEEEeCCCcCCC
Q 024125 251 QIISVDGGFTAN 262 (272)
Q Consensus 251 ~~i~~dgG~~~~ 262 (272)
+++++|||...+
T Consensus 242 ~~~~v~gg~~~s 253 (255)
T 1fmc_A 242 QILTVSGGGVQE 253 (255)
T ss_dssp CEEEESTTSCCC
T ss_pred cEEEECCceecc
Confidence 999999998764
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-46 Score=325.13 Aligned_cols=238 Identities=22% Similarity=0.270 Sum_probs=215.8
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-------HHHHHHHHHhCCCeEEEEEecCCCHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-------LNKCLKEWQSKGFVVSGSVCDAASPDQRE 82 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 82 (272)
+...+++||++|||||++|||++++++|+++|++|++++|+.++ +++..+++...+.++.++.+|++|.++++
T Consensus 38 ~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~ 117 (346)
T 3kvo_A 38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS 117 (346)
T ss_dssp CCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred ccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence 35577999999999999999999999999999999999998764 56677777777889999999999999999
Q ss_pred HHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC--
Q 024125 83 KLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-- 160 (272)
Q Consensus 83 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-- 160 (272)
++++++.+++ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+
T Consensus 118 ~~~~~~~~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~ 196 (346)
T 3kvo_A 118 AAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW 196 (346)
T ss_dssp HHHHHHHHHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG
T ss_pred HHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC
Confidence 9999999999 6999999999998888999999999999999999999999999999999988899999999998877
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCc-ccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWY-TKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
.++...|++||+++++|+++++.|++ .||+||+|+||+ ++|++...+.. ..+.++..+|+|+|+++++
T Consensus 197 ~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~----------~~~~~r~~~pedvA~~v~~ 265 (346)
T 3kvo_A 197 FKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGG----------PGIESQCRKVDIIADAAYS 265 (346)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC------------CGGGCBCTHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhcc----------ccccccCCCHHHHHHHHHH
Confidence 78889999999999999999999999 999999999995 99998764422 2356778899999999999
Q ss_pred HhcCCCCCccccEEEeCCCcCC
Q 024125 240 LCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
|+++ ..++||+++ +|||++.
T Consensus 266 L~s~-~~~itG~~i-vdgg~~~ 285 (346)
T 3kvo_A 266 IFQK-PKSFTGNFV-IDENILK 285 (346)
T ss_dssp HHTS-CTTCCSCEE-EHHHHHH
T ss_pred HHhc-CCCCCceEE-ECCcEeh
Confidence 9999 899999999 9999543
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=313.88 Aligned_cols=248 Identities=28% Similarity=0.458 Sum_probs=221.3
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+.+++++|++|||||+||||+++++.|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+
T Consensus 38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999988888888877677888999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++|
T Consensus 118 ~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as 196 (285)
T 2c07_A 118 EH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS 196 (285)
T ss_dssp HC-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred hc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHH
Confidence 98 68999999999987778888999999999999999999999999999988777999999999888888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|++++.|+++++.|+.+.||+|++++||+++|++.... .+..........|.+++.+|+|+|+++++++++...+++|
T Consensus 197 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G 274 (285)
T 2c07_A 197 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYING 274 (285)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc--CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCC
Confidence 99999999999999999999999999999999987653 2334445556678888999999999999999988889999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
+++.+|||+++
T Consensus 275 ~~i~v~gG~~~ 285 (285)
T 2c07_A 275 RVFVIDGGLSP 285 (285)
T ss_dssp CEEEESTTSCC
T ss_pred CEEEeCCCccC
Confidence 99999999864
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=308.76 Aligned_cols=239 Identities=28% Similarity=0.379 Sum_probs=208.5
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+.+..++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|+++.++++++++++
T Consensus 21 ~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 21 DKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred cchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 34455689999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred HHHcCCCccEEEECCCC-CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 89 GSKFNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
.+.+ +++|+||||||. ....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|
T Consensus 101 ~~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 179 (262)
T 3rkr_A 101 LAAH-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAY 179 (262)
T ss_dssp HHHH-SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHH
T ss_pred HHhc-CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchH
Confidence 9999 699999999998 56678888999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+++++|+++++.|++++||+|++|+||+++|++...... ..+..+..+|+|+|+++.||+++...+
T Consensus 180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~p~dvA~~v~~l~s~~~~~ 249 (262)
T 3rkr_A 180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------KKSALGAIEPDDIADVVALLATQADQS 249 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------ccccccCCCHHHHHHHHHHHhcCcccc
Confidence 9999999999999999999999999999999999999754321 134456779999999999999999999
Q ss_pred ccccEEEeCCC
Q 024125 248 ITGQIISVDGG 258 (272)
Q Consensus 248 ~~G~~i~~dgG 258 (272)
++|+.+..+.|
T Consensus 250 ~~g~~~i~p~~ 260 (262)
T 3rkr_A 250 FISEVLVRPTL 260 (262)
T ss_dssp CEEEEEEECCC
T ss_pred ccCcEEecccc
Confidence 99999988765
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=308.72 Aligned_cols=246 Identities=32% Similarity=0.537 Sum_probs=199.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
|++++|++|||||+||||++++++|+++|++|+++ +|+.+..++..+++...+.++.++.+|++|.++++++++++.+.
T Consensus 1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T 2hq1_A 1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA 80 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999998 67777777777777776778899999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++||
T Consensus 81 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 159 (247)
T 2hq1_A 81 F-GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASK 159 (247)
T ss_dssp H-SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence 8 689999999998777777788889999999999999999999999999887779999999998888888899999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.|++++||++++++||+++|++.... .+..........|.+++.+|+|+++.+.+++++...+++|+
T Consensus 160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 237 (247)
T 2hq1_A 160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQ 237 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc--chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCc
Confidence 9999999999999999999999999999999987654 23334445556788889999999999999999888899999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
++++|||+++
T Consensus 238 ~~~v~gG~~~ 247 (247)
T 2hq1_A 238 VINIDGGLVM 247 (247)
T ss_dssp EEEESTTC--
T ss_pred EEEeCCCccC
Confidence 9999999763
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=307.43 Aligned_cols=236 Identities=30% Similarity=0.382 Sum_probs=211.4
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecC--CCHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDA--ASPDQREKLI 85 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~~~~~ 85 (272)
+..+.++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ ..+.++.+|+ ++.+++++++
T Consensus 6 ~~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~ 85 (247)
T 3i1j_A 6 SAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELA 85 (247)
T ss_dssp CCCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHH
T ss_pred CCCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHH
Confidence 344567899999999999999999999999999999999999999999988887654 4566666666 9999999999
Q ss_pred HHHHHHcCCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC
Q 024125 86 QEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~ 164 (272)
+++.+.+ +++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++.
T Consensus 86 ~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~ 164 (247)
T 3i1j_A 86 ARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANW 164 (247)
T ss_dssp HHHHHHH-SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTC
T ss_pred HHHHHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCc
Confidence 9999999 6999999999984 5567888999999999999999999999999999998888999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHcc-CCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
..|++||+|+++|+++++.|+.+ ++|+||+|+||+++|+|....... .+..+..+|+|+++.++||+++
T Consensus 165 ~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~dva~~~~~l~s~ 234 (247)
T 3i1j_A 165 GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD----------ENPLNNPAPEDIMPVYLYLMGP 234 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT----------SCGGGSCCGGGGTHHHHHHHSG
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc----------cCccCCCCHHHHHHHHHHHhCc
Confidence 99999999999999999999977 799999999999999997654322 1223457899999999999999
Q ss_pred CCCCccccEEEe
Q 024125 244 AASYITGQIISV 255 (272)
Q Consensus 244 ~~~~~~G~~i~~ 255 (272)
+..++||++|++
T Consensus 235 ~~~~itG~~i~~ 246 (247)
T 3i1j_A 235 DSTGINGQALNA 246 (247)
T ss_dssp GGTTCCSCEEEC
T ss_pred hhccccCeeecC
Confidence 999999999986
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=312.49 Aligned_cols=232 Identities=27% Similarity=0.338 Sum_probs=206.5
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.++|++|||||++|||++++++|++ .|++|++++|+++. ....+.++.+|++|.++++++++.+. +
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~- 68 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--N- 68 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--T-
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--h-
Confidence 4689999999999999999999999 78899999987641 12356788999999999999996554 4
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|+++ ++||++||..+..+.++...|++||++
T Consensus 69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa 146 (244)
T 4e4y_A 69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGA 146 (244)
T ss_dssp CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHH
Confidence 689999999999888889999999999999999999999999999999765 799999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH---------HHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK---------EFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
+++|+++++.|++++||+||+|+||+++|++........ +.........|.+++.+|+|+|++++||+++.
T Consensus 147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~ 226 (244)
T 4e4y_A 147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK 226 (244)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCc
Confidence 999999999999999999999999999999987653321 14455567789999999999999999999999
Q ss_pred CCCccccEEEeCCCcCC
Q 024125 245 ASYITGQIISVDGGFTA 261 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~ 261 (272)
..++||++|.+|||+++
T Consensus 227 ~~~itG~~i~vdGG~~~ 243 (244)
T 4e4y_A 227 SKFMTGGLIPIDGGYTA 243 (244)
T ss_dssp GTTCCSCEEEESTTGGG
T ss_pred cccccCCeEeECCCccC
Confidence 99999999999999875
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=310.84 Aligned_cols=240 Identities=23% Similarity=0.218 Sum_probs=211.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHH---CCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAG---LGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~---~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
++++|++|||||++|||++++++|++ +|++|++++|+.+.+++..+++... +.++.++.+|++|.++++++++++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 57899999999999999999999999 8999999999999998888887654 568899999999999999999999
Q ss_pred HH--HcCCCcc--EEEECCCCCCC--CCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCeEEEecCCCCCC
Q 024125 89 GS--KFNGKLN--ILVNNVGTNIR--KPTIE-YSAEEYSKIMTTNFESTYHLCQLVYPLLKAS--GVGSIVFISSVGGLS 159 (272)
Q Consensus 89 ~~--~~~~~id--~li~~ag~~~~--~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~ii~vsS~~~~~ 159 (272)
.+ .+ +++| +||||||+... .++.+ .+.++|++++++|+.++++++++++|+|+++ +.|+||++||..+..
T Consensus 83 ~~~~~~-g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~ 161 (259)
T 1oaa_A 83 RELPRP-EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHSCCC-TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred Hhcccc-ccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence 87 55 5788 99999998543 45667 6899999999999999999999999999876 568999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CHHHHHHHHhcCCCCCCCCHHHHHHH
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NKEFVDKVIARTPLQRVGEPEEVASL 236 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~a~~ 236 (272)
+.++...|++||+++++|+++++.|+++ |+||+|+||+++|+|...... .++....+....|.+++.+|+|+|+.
T Consensus 162 ~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~ 239 (259)
T 1oaa_A 162 PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK 239 (259)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHH
Confidence 9999999999999999999999999963 999999999999999765432 23334444555678889999999999
Q ss_pred HHHHhcCCCCCccccEEEeCC
Q 024125 237 VAYLCLPAASYITGQIISVDG 257 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~dg 257 (272)
+++|+++ ..++||++|.+||
T Consensus 240 v~~l~~~-~~~itG~~i~vdg 259 (259)
T 1oaa_A 240 LLGLLQK-DTFQSGAHVDFYD 259 (259)
T ss_dssp HHHHHHH-CCSCTTEEEETTC
T ss_pred HHHHHhh-ccccCCcEEeccC
Confidence 9999985 6899999999986
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-46 Score=309.71 Aligned_cols=233 Identities=24% Similarity=0.297 Sum_probs=205.2
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-e--CChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTC-S--RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+|++|||||++|||++++++|+++|++|+++ + |+.+++++..+++ .+ .|+.|.++++++++++.+.+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~- 70 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHG- 70 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGS-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHc-
Confidence 5899999999999999999999999999999 6 9998887776655 22 22336677788899988888
Q ss_pred CCccEEEECCCCCCC---CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 94 GKLNILVNNVGTNIR---KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 94 ~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+++|+||||||.... .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus 71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 150 (244)
T 1zmo_A 71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPA 150 (244)
T ss_dssp SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHH
T ss_pred CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHH
Confidence 689999999998777 78889999999999999999999999999999998888999999999999998999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhh---HhhhhCHHHHHHHHh-cCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV---ERLLENKEFVDKVIA-RTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|+++++|+++++.|++++||+||+|+||+++|+|. ...... +....... ..|.+++.+|+|+|+.+++|+++...
T Consensus 151 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~ 229 (244)
T 1zmo_A 151 RAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN-PELRERVDRDVPLGRLGRPDEMGALITFLASRRAA 229 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC-HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTG
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch-HHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 99999999999999999999999999999999997 554322 22333344 57888999999999999999999999
Q ss_pred CccccEEEeCCCcC
Q 024125 247 YITGQIISVDGGFT 260 (272)
Q Consensus 247 ~~~G~~i~~dgG~~ 260 (272)
++||++|.+|||++
T Consensus 230 ~~tG~~i~vdgG~~ 243 (244)
T 1zmo_A 230 PIVGQFFAFTGGYL 243 (244)
T ss_dssp GGTTCEEEESTTCC
T ss_pred CccCCEEEeCCCCC
Confidence 99999999999975
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-45 Score=304.70 Aligned_cols=245 Identities=31% Similarity=0.448 Sum_probs=218.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||+||||++++++|+++|++|++++|+.+..++..+++... .++.++.+|++|.++++++++++.+.+
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF- 80 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 578999999999999999999999999999999999998888777666433 468889999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++. ++||++||..+..+.++...|++||+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG 160 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHH
Confidence 68999999999887778888999999999999999999999999999988776 89999999999988889999999999
Q ss_pred HHHHHHHHHHHHHc--cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 173 AMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 173 a~~~~~~~la~el~--~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
+++.++++++.|+. ++||++++++||++.|++..... ............|.+++.+|+|+++.+.+++++...+++|
T Consensus 161 a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G 239 (251)
T 1zk4_A 161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATG 239 (251)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-THHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC-chhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccC
Confidence 99999999999998 88999999999999999987542 2222222234457788899999999999999988889999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
+++.+|||+++
T Consensus 240 ~~~~v~gG~~~ 250 (251)
T 1zk4_A 240 SEFVVDGGYTA 250 (251)
T ss_dssp CEEEESTTGGG
T ss_pred cEEEECCCccC
Confidence 99999999875
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-45 Score=303.98 Aligned_cols=242 Identities=28% Similarity=0.431 Sum_probs=218.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
||++|||||+||||++++++|+++|++|++ .+|+.+..+++.+++...+.++.++.+|++|.++++++++++.+.+ ++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~ 79 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GT 79 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence 689999999999999999999999999988 5899888888877777666788899999999999999999999998 68
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.++...|++||++++
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 159 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI 159 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence 99999999988777888889999999999999999999999999998877799999999988888888999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-cCCCCCccccEEE
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC-LPAASYITGQIIS 254 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~-~~~~~~~~G~~i~ 254 (272)
.++++++.++.++||+|++++||++.|++.... .+..........|.+++.+|+|+++++.+++ ++...+++|++++
T Consensus 160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~ 237 (244)
T 1edo_A 160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFT 237 (244)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEE
T ss_pred HHHHHHHHHhhhcCCEEEEEeeCccccchhhhc--ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEE
Confidence 999999999999999999999999999997654 2334445556678888999999999999999 6778899999999
Q ss_pred eCCCcCC
Q 024125 255 VDGGFTA 261 (272)
Q Consensus 255 ~dgG~~~ 261 (272)
+|||+++
T Consensus 238 v~gG~~~ 244 (244)
T 1edo_A 238 IDGGIAI 244 (244)
T ss_dssp ESTTTTC
T ss_pred eCCCccC
Confidence 9999763
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-45 Score=304.46 Aligned_cols=237 Identities=25% Similarity=0.356 Sum_probs=209.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~- 82 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL- 82 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999999999988888887767788899999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|.+++ |+||++||..+..+.++...|++||++
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a 161 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFG 161 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence 6899999999998778888999999999999999999999999999998777 999999999999998999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCC--CCHHHHHHHHHHHhcCCCCCcccc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRV--GEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+++|+++++.|++++||+||+|+||+++|++..... ...... .....| +++ .+|+|+|+.+++++++...+.+++
T Consensus 162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~-~~~~~~-~~~~~~~pedvA~~v~~l~s~~~~~~~~~ 238 (247)
T 2jah_A 162 VNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT-HTATKE-MYEQRI-SQIRKLQAQDIAEAVRYAVTAPHHATVHE 238 (247)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC-CHHHHH-HHHHHT-TTSCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc-chhhHH-HHHhcc-cccCCCCHHHHHHHHHHHhCCCccCccce
Confidence 999999999999999999999999999999976432 122111 112223 444 899999999999999888887776
Q ss_pred EEEeC
Q 024125 252 IISVD 256 (272)
Q Consensus 252 ~i~~d 256 (272)
. .++
T Consensus 239 i-~i~ 242 (247)
T 2jah_A 239 I-FIR 242 (247)
T ss_dssp E-EEE
T ss_pred E-Eec
Confidence 4 444
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=312.98 Aligned_cols=243 Identities=21% Similarity=0.213 Sum_probs=212.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|++|||||++|||++++++|+++|++|++++|+.+++++.. ..++.++.+|++|.++++++++++.+.+
T Consensus 12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEKIY 85 (266)
T ss_dssp ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence 3578999999999999999999999999999999999987755432 2367888999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+.++...|++||+
T Consensus 86 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~ 164 (266)
T 3p19_A 86 -GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKF 164 (266)
T ss_dssp -CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHH
Confidence 6999999999998888899999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHH-hcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVI-ARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++|+++++.|++++||+||+|+||+++|++...... ........ ...|.+++.+|+|+|++++||++....++.++
T Consensus 165 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~~ 243 (266)
T 3p19_A 165 AVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS-QQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIRE 243 (266)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC-HHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc-hhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCcccee
Confidence 99999999999999999999999999999999865532 22222222 13478889999999999999999888899999
Q ss_pred EEEeCCCcCCCC
Q 024125 252 IISVDGGFTANG 263 (272)
Q Consensus 252 ~i~~dgG~~~~~ 263 (272)
.+....+....+
T Consensus 244 i~i~p~~~~~~~ 255 (266)
T 3p19_A 244 IALAPTKQQPKL 255 (266)
T ss_dssp EEEEETTCCC--
T ss_pred eEEecCCCCCcc
Confidence 888777766544
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=309.92 Aligned_cols=240 Identities=26% Similarity=0.325 Sum_probs=209.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||++|||++++++|+++|++|++++|+.++.++..+ +...+.++..+ |.++++++++++.+.+ +++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~-g~iD 74 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAY-GQVD 74 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHH-SCCC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999888776655 55444444433 5566777888888888 6999
Q ss_pred EEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 98 ILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 98 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+++++
T Consensus 75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 154 (254)
T 1zmt_A 75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT 154 (254)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence 999999987 6778888999999999999999999999999999988777999999999999998999999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcc---------cChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYT---------KTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
|+++++.|++++||+||+|+||++ +|++... .++.........|.+++.+|+|+|+.+++|+++...+
T Consensus 155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~ 231 (254)
T 1zmt_A 155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDY 231 (254)
T ss_dssp HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGG
T ss_pred HHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCC
Confidence 999999999999999999999999 8888643 2333444455678889999999999999999998999
Q ss_pred ccccEEEeCCCcCCCCCCCC
Q 024125 248 ITGQIISVDGGFTANGFNPG 267 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~~~~~ 267 (272)
++|+++.+|||+++...++|
T Consensus 232 ~tG~~~~vdgG~~~~~~~~~ 251 (254)
T 1zmt_A 232 LTGQVFWLAGGFPMIERWPG 251 (254)
T ss_dssp GTTCEEEESTTCCCCCCCTT
T ss_pred ccCCEEEECCCchhhccCCC
Confidence 99999999999987655544
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-45 Score=308.02 Aligned_cols=251 Identities=29% Similarity=0.444 Sum_probs=217.9
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
.+...+++++|++|||||++|||++++++|+++|++|++++|+.++..+..+++.+ .+.++.++.+|++|.++++++++
T Consensus 5 ~~~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~ 84 (265)
T 1h5q_A 5 APGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ 84 (265)
T ss_dssp -CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHH
Confidence 34455678999999999999999999999999999999999976666555555543 25678889999999999999999
Q ss_pred HHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCC--
Q 024125 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGS-- 163 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~-- 163 (272)
++.+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.+.
T Consensus 85 ~~~~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~ 163 (265)
T 1h5q_A 85 QIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL 163 (265)
T ss_dssp HHHHHS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred HHHHhc-CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc
Confidence 999998 6899999999988777888889999999999999999999999999998765 489999999887655432
Q ss_pred -----ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024125 164 -----GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 164 -----~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~ 238 (272)
...|++||++++.|+++++.|+.++||+|++++||+++|++.... .+..........|.+++.+|+|+++.+.
T Consensus 164 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (265)
T 1h5q_A 164 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAI 241 (265)
T ss_dssp TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHHHHHHHHH
Confidence 688999999999999999999999999999999999999997654 2333444555678888999999999999
Q ss_pred HHhcCCCCCccccEEEeCCCcCC
Q 024125 239 YLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 239 ~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
+|+++...+++|+.+.+|||+++
T Consensus 242 ~l~~~~~~~~~G~~~~v~gG~~~ 264 (265)
T 1h5q_A 242 LLLSDHATYMTGGEYFIDGGQLI 264 (265)
T ss_dssp HHHSGGGTTCCSCEEEECTTGGG
T ss_pred hhccCchhcCcCcEEEecCCEeC
Confidence 99998889999999999999865
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=306.91 Aligned_cols=245 Identities=25% Similarity=0.390 Sum_probs=209.4
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+.+++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++ +.++.++.+|++|.++++++++++.
T Consensus 5 ~~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (265)
T 2o23_A 5 AACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAK 81 (265)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999988877776665 4568889999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCC------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCeEEEecCCCC
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIE------YSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISSVGG 157 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~ii~vsS~~~ 157 (272)
+++ +++|+||||||.....++.+ .+.++|++.+++|+.+++.++++++|+|+++ +.++||++||..+
T Consensus 82 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 160 (265)
T 2o23_A 82 GKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA 160 (265)
T ss_dssp HHH-SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred HHC-CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh
Confidence 998 68999999999866555443 7889999999999999999999999999877 6689999999998
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC-CCCCCHHHHHHH
Q 024125 158 LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASL 236 (272)
Q Consensus 158 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~a~~ 236 (272)
..+.++...|++||++++.|+++++.|++++||+|++|+||+++|++..... +..........|. +++.+|+|+|+.
T Consensus 161 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~ 238 (265)
T 2o23_A 161 FEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP--EKVCNFLASQVPFPSRLGDPAEYAHL 238 (265)
T ss_dssp HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHH
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC--HHHHHHHHHcCCCcCCCCCHHHHHHH
Confidence 8888889999999999999999999999999999999999999999976432 1222333445676 788999999999
Q ss_pred HHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 237 VAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+.++++ ..+++|+++.+|||+++.
T Consensus 239 ~~~l~~--~~~~~G~~i~vdgG~~~~ 262 (265)
T 2o23_A 239 VQAIIE--NPFLNGEVIRLDGAIRMQ 262 (265)
T ss_dssp HHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred HHHHhh--cCccCceEEEECCCEecC
Confidence 999995 578999999999998764
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=310.32 Aligned_cols=247 Identities=29% Similarity=0.446 Sum_probs=217.5
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+.+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|++|.++++++++++.+
T Consensus 28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp GGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999999998777777766665566788899999999999999999999
Q ss_pred HcCCCccEEEECCCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC--CCCChh
Q 024125 91 KFNGKLNILVNNVGTNIR-KPTI-EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--VGSGSI 166 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~--~~~~~~ 166 (272)
.+ +++|+||||||.... .++. +.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+ .++...
T Consensus 108 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~ 186 (279)
T 3ctm_A 108 DF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP 186 (279)
T ss_dssp HH-SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHH
T ss_pred Hh-CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCccc
Confidence 98 689999999998665 6666 778899999999999999999999999998877799999999998877 778899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|++||++++.++++++.|+++++ +|++|+||+++|++.... .++.........|.+++.+|+|+|+.+.+|+++...
T Consensus 187 Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~ 263 (279)
T 3ctm_A 187 YNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQELVGGYLYLASNAST 263 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--CHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--ChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999 999999999999987432 233344444567888899999999999999998889
Q ss_pred CccccEEEeCCCcCC
Q 024125 247 YITGQIISVDGGFTA 261 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~ 261 (272)
+++|+++.+|||+++
T Consensus 264 ~~tG~~i~vdgG~~~ 278 (279)
T 3ctm_A 264 FTTGSDVVIDGGYTC 278 (279)
T ss_dssp TCCSCEEEESTTCCC
T ss_pred CccCCEEEECCCeec
Confidence 999999999999875
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=302.16 Aligned_cols=245 Identities=33% Similarity=0.466 Sum_probs=219.6
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++++|++|||||+||||++++++|+++|++|++++|+.++.++..+++.. .+.++.++.+|++|.++++++++++.+.
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999999999888887777754 3567888999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|+||||||.....++.+.+.+++++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|
T Consensus 83 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 161 (248)
T 2pnf_A 83 V-DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK 161 (248)
T ss_dssp S-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence 8 689999999998777778888999999999999999999999999999887778999999988877778889999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.|+.+++|++++++||+++|++.... ............|.+++.+|+|+++++.+++++...+++|+
T Consensus 162 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 239 (248)
T 2pnf_A 162 AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGE 239 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc--cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCc
Confidence 9999999999999999999999999999999997653 22333444455678889999999999999999878899999
Q ss_pred EEEeCCCcC
Q 024125 252 IISVDGGFT 260 (272)
Q Consensus 252 ~i~~dgG~~ 260 (272)
++.+|||++
T Consensus 240 ~~~v~gg~~ 248 (248)
T 2pnf_A 240 VIHVNGGMF 248 (248)
T ss_dssp EEEESTTCC
T ss_pred EEEeCCCcC
Confidence 999999963
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=326.35 Aligned_cols=244 Identities=20% Similarity=0.219 Sum_probs=208.0
Q ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChH---------HHHHHHHHHHh---CCCeEEEEEecCCCH--H
Q 024125 16 KGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEV---------ELNKCLKEWQS---KGFVVSGSVCDAASP--D 79 (272)
Q Consensus 16 ~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~~~---------~~~~~~~~~~~---~~~~~~~~~~D~~~~--~ 79 (272)
.+|++||||+++ |||+++|++|+++|++|++++|++. +.+...+.+.. ....+..+.+|+++. +
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 379999999986 9999999999999999998776652 22211111111 123467788898887 7
Q ss_pred ------------------HHHHHHHHHHHHcCCCccEEEECCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Q 024125 80 ------------------QREKLIQEVGSKFNGKLNILVNNVGTN--IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139 (272)
Q Consensus 80 ------------------~~~~~~~~~~~~~~~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (272)
+++++++++.+++ +++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~-g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p 159 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhc-CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999999 6999999999974 467888999999999999999999999999999
Q ss_pred HHHcCCCCeEEEecCCCCCCCCCCCh-hhHHHHHHHHHHHHHHHHHHcc-CCeeEEEeeCCcccChhhHhhhhCH-----
Q 024125 140 LLKASGVGSIVFISSVGGLSHVGSGS-IYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVERLLENK----- 212 (272)
Q Consensus 140 ~~~~~~~g~ii~vsS~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~PG~v~t~~~~~~~~~~----- 212 (272)
+|+++ |+||++||..+..+.++.. .|++||+|+++|+++++.|+++ +||+||+|+||+++|+|........
T Consensus 160 ~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~ 237 (329)
T 3lt0_A 160 IMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN 237 (329)
T ss_dssp GEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--------
T ss_pred HHhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccc
Confidence 99875 8999999999999988885 9999999999999999999998 8999999999999999987652210
Q ss_pred --------------------------------------HHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 213 --------------------------------------EFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 213 --------------------------------------~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
+.........|.+++.+|+|+|++++||+++.+.++||++|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~ 317 (329)
T 3lt0_A 238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY 317 (329)
T ss_dssp ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred cccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEE
Confidence 124455667899999999999999999999999999999999
Q ss_pred eCCCcCCC
Q 024125 255 VDGGFTAN 262 (272)
Q Consensus 255 ~dgG~~~~ 262 (272)
+|||+++.
T Consensus 318 vdGG~~~~ 325 (329)
T 3lt0_A 318 VDNGLNIM 325 (329)
T ss_dssp ESTTGGGC
T ss_pred EcCCeeEE
Confidence 99999885
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=307.44 Aligned_cols=236 Identities=22% Similarity=0.260 Sum_probs=189.6
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++. .++.++.+|++|.++++++++++.+
T Consensus 22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 98 (272)
T 4dyv_A 22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---DDALCVPTDVTDPDSVRALFTATVE 98 (272)
T ss_dssp ------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---SCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 3445789999999999999999999999999999999999999888877763 5678899999999999999999999
Q ss_pred HcCCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCeEEEecCCCCCCCCCCChhh
Q 024125 91 KFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
++ +++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.++...|
T Consensus 99 ~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y 177 (272)
T 4dyv_A 99 KF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPY 177 (272)
T ss_dssp HH-SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHH
Confidence 99 799999999998644 6788999999999999999999999999999998875 6899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+++|+++++.|++++||+||+|+||+++|++........ .......+.+++.+|+|+|++++||++.....
T Consensus 178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~ 254 (272)
T 4dyv_A 178 TATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV---PQADLSIKVEPVMDVAHVASAVVYMASLPLDA 254 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc---hhhhhcccccCCCCHHHHHHHHHHHhCCCCcC
Confidence 999999999999999999999999999999999999987653321 12223456778899999999999999955554
Q ss_pred ccccEE
Q 024125 248 ITGQII 253 (272)
Q Consensus 248 ~~G~~i 253 (272)
..++..
T Consensus 255 ~~~~i~ 260 (272)
T 4dyv_A 255 NVQFMT 260 (272)
T ss_dssp CCCEEE
T ss_pred ccceEE
Confidence 444333
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-44 Score=303.73 Aligned_cols=254 Identities=27% Similarity=0.398 Sum_probs=218.6
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
..+.+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++... .++.++.+|++|.++++++++++
T Consensus 8 ~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~ 86 (278)
T 2bgk_A 8 DSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTT 86 (278)
T ss_dssp ---CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC-CceEEEECCCCCHHHHHHHHHHH
Confidence 44567789999999999999999999999999999999999988877776666332 36888999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC-CCh
Q 024125 89 GSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGS 165 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~-~~~ 165 (272)
.+++ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.+ +..
T Consensus 87 ~~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~ 165 (278)
T 2bgk_A 87 IAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSH 165 (278)
T ss_dssp HHHH-SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCH
T ss_pred HHHc-CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCc
Confidence 9998 68999999999753 3567788999999999999999999999999999887789999999999888777 788
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhc--CCCCCCCCHHHHHHHHHHHhc
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIAR--TPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~e~a~~~~~l~~ 242 (272)
.|++||++++.++++++.|++++||+|++++||++.|++...... .+......... .+.+++.+|+|+|++++++++
T Consensus 166 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 245 (278)
T 2bgk_A 166 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAG 245 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999998765432 22333333222 356778999999999999999
Q ss_pred CCCCCccccEEEeCCCcCCCCC
Q 024125 243 PAASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~~~~ 264 (272)
+...+++|+++++|||+.+...
T Consensus 246 ~~~~~~~G~~~~v~gg~~~~~~ 267 (278)
T 2bgk_A 246 DESKYVSGLNLVIDGGYTRTNP 267 (278)
T ss_dssp GGGTTCCSCEEEESTTGGGCCT
T ss_pred cccccCCCCEEEECCcccccCC
Confidence 8888999999999999877643
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-45 Score=306.78 Aligned_cols=246 Identities=29% Similarity=0.458 Sum_probs=210.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-------CeEEEEEecCCCHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-------FVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~ 86 (272)
++++|++|||||+||||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|.++++++++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 4789999999999999999999999999999999999988887776654433 567888999999999999999
Q ss_pred HHHHHcCCCc-cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCC
Q 024125 87 EVGSKFNGKL-NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSG 164 (272)
Q Consensus 87 ~~~~~~~~~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~ 164 (272)
++.+.+ +++ |+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.++.
T Consensus 84 ~~~~~~-g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 162 (264)
T 2pd6_A 84 QVQACF-SRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ 162 (264)
T ss_dssp HHHHHH-SSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTB
T ss_pred HHHHHh-CCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCC
Confidence 999998 687 9999999987777888889999999999999999999999999998765 6899999999888888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
..|++||++++.|+++++.+++++||+|++++||++.|++..... +..........|.+++.+|+|+++.+.+++++.
T Consensus 163 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 240 (264)
T 2pd6_A 163 TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP--QKVVDKITEMIPMGHLGDPEDVADVVAFLASED 240 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC--HHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCc
Confidence 999999999999999999999999999999999999999876432 122333344567788899999999999999988
Q ss_pred CCCccccEEEeCCCcCCC
Q 024125 245 ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~ 262 (272)
..+++|+.+.+|||+++.
T Consensus 241 ~~~~~G~~~~v~gg~~~~ 258 (264)
T 2pd6_A 241 SGYITGTSVEVTGGLFMA 258 (264)
T ss_dssp GTTCCSCEEEESTTC---
T ss_pred ccCCCCCEEEECCCceec
Confidence 889999999999998764
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=313.34 Aligned_cols=245 Identities=25% Similarity=0.357 Sum_probs=200.8
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.....+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++... +..+.++.+|++|.+++++++++
T Consensus 25 ~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 104 (281)
T 4dry_A 25 AQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAA 104 (281)
T ss_dssp ---------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred cccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 34456789999999999999999999999999999999999999999888887654 33458899999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCeEEEecCCCCCCCCCCC
Q 024125 88 VGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSHVGSG 164 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~ii~vsS~~~~~~~~~~ 164 (272)
+.+++ +++|+||||||.... .++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.++.
T Consensus 105 ~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~ 183 (281)
T 4dry_A 105 VRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNS 183 (281)
T ss_dssp HHHHH-SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTC
T ss_pred HHHHc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCC
Confidence 99999 799999999998644 6888899999999999999999999999999998875 6899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc-C
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL-P 243 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~-~ 243 (272)
..|++||+|+++|+++++.|++++||+||+|+||+++|+|........ .......+.+++.+|+|+|++++||++ +
T Consensus 184 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pedvA~~v~fL~s~~ 260 (281)
T 4dry_A 184 APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV---LQANGEVAAEPTIPIEHIAEAVVYMASLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE---ECTTSCEEECCCBCHHHHHHHHHHHHHSC
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh---hhhhhcccccCCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999976543210 001122455678899999999999998 4
Q ss_pred CCCCccccEEEeCC
Q 024125 244 AASYITGQIISVDG 257 (272)
Q Consensus 244 ~~~~~~G~~i~~dg 257 (272)
....+++.+|.-..
T Consensus 261 ~~~~i~~~~i~p~~ 274 (281)
T 4dry_A 261 LSANVLTMTVMATR 274 (281)
T ss_dssp TTEEEEEEEEEETT
T ss_pred ccCccccEEEEecc
Confidence 45556666665444
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=300.12 Aligned_cols=240 Identities=30% Similarity=0.441 Sum_probs=211.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++. .+.++.+|++|.++++++++ .+
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~ 74 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc
Confidence 56889999999999999999999999999999999999888776665432 23456899999999988876 34
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.++...|++||
T Consensus 75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 153 (244)
T 3d3w_A 75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK 153 (244)
T ss_dssp -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHH
Confidence 6899999999987777788889999999999999999999999999998766 68999999999998888999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.|++++||+|++++||++.|++.......+..........|.+++.+|+|+++++++++++...+++|+
T Consensus 154 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 233 (244)
T 3d3w_A 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGS 233 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCC
Confidence 99999999999999999999999999999999976543333334455566788899999999999999999878899999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
++++|||+++
T Consensus 234 ~~~v~gG~~~ 243 (244)
T 3d3w_A 234 TLPVEGGFWA 243 (244)
T ss_dssp EEEESTTGGG
T ss_pred EEEECCCccC
Confidence 9999999864
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-44 Score=307.74 Aligned_cols=251 Identities=29% Similarity=0.406 Sum_probs=219.6
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+..++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|.++++++++++.
T Consensus 20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999999999999999999888888777654 5678899999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK-ASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+.+ +++|+||||||.....++.+.+.+++++.+++|+.++++++++++|+|. +++.++||++||..+..+.++...|+
T Consensus 100 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~ 178 (302)
T 1w6u_A 100 KVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA 178 (302)
T ss_dssp HHT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhH
Confidence 998 6999999999987777888889999999999999999999999999997 44568999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccCh-hhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS-LVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+||++++.|+++++.+++++||+|++++||++.|+ +..................|.+++.+|+|+|+++.+++++...+
T Consensus 179 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~ 258 (302)
T 1w6u_A 179 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASW 258 (302)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccc
Confidence 99999999999999999999999999999999998 54433222222234556678888999999999999999988889
Q ss_pred ccccEEEeCCCcCCC
Q 024125 248 ITGQIISVDGGFTAN 262 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~ 262 (272)
++|+++++|||..+.
T Consensus 259 ~~G~~~~v~gg~~~~ 273 (302)
T 1w6u_A 259 INGAVIKFDGGEEVL 273 (302)
T ss_dssp CCSCEEEESTTHHHH
T ss_pred cCCCEEEECCCeeec
Confidence 999999999997654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-44 Score=297.79 Aligned_cols=242 Identities=31% Similarity=0.456 Sum_probs=217.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEE-EEecCCCHHHHHHHHHHHHHHcCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSG-SVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+|++|||||+||||++++++|+++|++|+++ +|+.++.++..+++...+.++.. +.+|++|.++++++++++.+.+ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 79 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-G 79 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-T
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-C
Confidence 4899999999999999999999999999998 89998888888777766666666 8999999999999999999998 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+++
T Consensus 80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 159 (245)
T 2ph3_A 80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL 159 (245)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence 89999999998777778888999999999999999999999999999887779999999998888888889999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
+.++++++.|+.++||++++++||++.|++.... .+..........|.+++.+|+|+++.+.+++++...+++|+++.
T Consensus 160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 237 (245)
T 2ph3_A 160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLC 237 (245)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence 9999999999999999999999999999997653 23344445556788889999999999999998877899999999
Q ss_pred eCCCcCC
Q 024125 255 VDGGFTA 261 (272)
Q Consensus 255 ~dgG~~~ 261 (272)
+|||++.
T Consensus 238 v~gg~~~ 244 (245)
T 2ph3_A 238 VDGGLTP 244 (245)
T ss_dssp ESTTCSC
T ss_pred ECCCCCC
Confidence 9999764
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=299.24 Aligned_cols=226 Identities=20% Similarity=0.204 Sum_probs=194.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.. ++.++.+|++|.++++++++++.+++ ++
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 77 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWG-GL 77 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHH-CS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence 479999999999999999999999999999999999999888877732 58889999999999999999999999 69
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++ ++||++||..+..+.++...|++||+|++
T Consensus 78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~ 156 (235)
T 3l6e_A 78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMR 156 (235)
T ss_dssp CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHH
Confidence 99999999998888888999999999999999999999999999998766 59999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc-CCCCCccccEEE
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL-PAASYITGQIIS 254 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~-~~~~~~~G~~i~ 254 (272)
+|+++++.|++++||+||+|+||+++|++...... .+..++.+|+|+|+.++++++ +...+++|-.+.
T Consensus 157 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~~ 225 (235)
T 3l6e_A 157 GFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFIG 225 (235)
T ss_dssp HHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEEE
T ss_pred HHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEEe
Confidence 99999999999999999999999999999754321 233467899999999999998 677888887776
Q ss_pred eCC
Q 024125 255 VDG 257 (272)
Q Consensus 255 ~dg 257 (272)
-..
T Consensus 226 ~~~ 228 (235)
T 3l6e_A 226 RNE 228 (235)
T ss_dssp ECC
T ss_pred cCC
Confidence 443
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=297.35 Aligned_cols=233 Identities=21% Similarity=0.229 Sum_probs=208.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH-hCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++|++|||||++|||++++++|+++|++|++++|+.+++++..+++. ..+.++.++.+|++|.++++++++++.+.+ +
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g 79 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-G 79 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-S
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-C
Confidence 47999999999999999999999999999999999999998888876 446789999999999999999999999998 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|+++ .+++|+++|..+..+.++...|++||+++
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~ 158 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIPYGGGYVSTKWAA 158 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcccCCCcchHHHHHHHH
Confidence 99999999999888899999999999999999999999999999999544 48999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
++|++++ ++..++|+||+|+||+++|++........ +..++.+|+|+|+++.+|+++...+++|+.+.
T Consensus 159 ~~~~~~l--~~~~~~i~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~ 226 (235)
T 3l77_A 159 RALVRTF--QIENPDVRFFELRPGAVDTYFGGSKPGKP----------KEKGYLKPDEIAEAVRCLLKLPKDVRVEELML 226 (235)
T ss_dssp HHHHHHH--HHHCTTSEEEEEEECSBSSSTTTCCSCCC----------GGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEE
T ss_pred HHHHHHH--hhcCCCeEEEEEeCCccccccccccCCcc----------cccCCCCHHHHHHHHHHHHcCCCCCccceEEE
Confidence 9999999 44577999999999999999976543221 12257799999999999999999999999999
Q ss_pred eCCCcCCC
Q 024125 255 VDGGFTAN 262 (272)
Q Consensus 255 ~dgG~~~~ 262 (272)
.|+|....
T Consensus 227 ~~~~~~~~ 234 (235)
T 3l77_A 227 RSVYQRPE 234 (235)
T ss_dssp CCTTSCCC
T ss_pred eecccCCC
Confidence 99998654
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=302.30 Aligned_cols=245 Identities=29% Similarity=0.447 Sum_probs=219.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|++|||||+||||++++++|+++|++|++++|+ .+.++++.+++...+.++.++.+|++|.++++++++++.+++
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999999998 888888888887767789999999999999999999999998
Q ss_pred CCCccEEEECCCC-CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--C---CeEEEecCCCCCC-CCCCCh
Q 024125 93 NGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--V---GSIVFISSVGGLS-HVGSGS 165 (272)
Q Consensus 93 ~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~---g~ii~vsS~~~~~-~~~~~~ 165 (272)
+++|+||||||. ....++.+.+.++|++.+++|+.+++.++++++|.|.+++ . ++||++||..+.. +.++..
T Consensus 84 -g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 162 (258)
T 3afn_B 84 -GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAG 162 (258)
T ss_dssp -SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCH
T ss_pred -CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCch
Confidence 689999999997 6667788889999999999999999999999999997544 3 8999999998877 778889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
.|++||++++.+++.++.+++++||+|++++||++.|++.... .+..........|.+++.+|+|+++.+.+++++..
T Consensus 163 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 240 (258)
T 3afn_B 163 LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLA 240 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcch
Confidence 9999999999999999999999999999999999999997543 23444555666788889999999999999998766
Q ss_pred C-CccccEEEeCCCcCC
Q 024125 246 S-YITGQIISVDGGFTA 261 (272)
Q Consensus 246 ~-~~~G~~i~~dgG~~~ 261 (272)
. +++|+++++|||++.
T Consensus 241 ~~~~~G~~~~v~gg~~~ 257 (258)
T 3afn_B 241 SGYITGQVLDINGGQYK 257 (258)
T ss_dssp HTTCCSEEEEESTTSSC
T ss_pred hccccCCEEeECCCccC
Confidence 6 899999999999753
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=324.20 Aligned_cols=245 Identities=27% Similarity=0.324 Sum_probs=208.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
..+++|++|||||++|||++++++|+++|++|++++|+... +++.+..... .+.++.+|++|.++++++++++.+++
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999986432 2222222222 24578999999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
++++|+||||||+....++.+.+.++|++++++|+.+++++.+++.|.|.+++.++||++||..+..+.++...|++||+
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKa 365 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKA 365 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHH
Confidence 54599999999998888889999999999999999999999999999998888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
++++|+++++.|++++||+||+|+||+++|+|....... .........+.++..+|+|+++++.||+++.+.++||++
T Consensus 366 al~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~ 443 (454)
T 3u0b_A 366 GMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA--TREVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNT 443 (454)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCE
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh--hHHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcE
Confidence 999999999999999999999999999999998654321 122233456788889999999999999999999999999
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
|.+|||.+++
T Consensus 444 i~vdGG~~lG 453 (454)
T 3u0b_A 444 IRVCGQAMLG 453 (454)
T ss_dssp EEESSSBSCC
T ss_pred EEECCccccc
Confidence 9999999875
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=298.28 Aligned_cols=219 Identities=25% Similarity=0.338 Sum_probs=195.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||++|||++++++|+++|++|++++|+.+ +|++|+++++++++++
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~---- 57 (223)
T 3uce_A 2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI---- 57 (223)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH----
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh----
Confidence 4678999999999999999999999999999999998764 7999999999998765
Q ss_pred CCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++. |+||++||..+..+.++...|++||
T Consensus 58 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asK 134 (223)
T 3uce_A 58 -GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG--GSITLTSGMLSRKVVANTYVKAAIN 134 (223)
T ss_dssp -CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE--EEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC--eEEEEecchhhccCCCCchHHHHHH
Confidence 6899999999986 66788899999999999999999999999999999763 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN--KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
+++++|+++++.|+++ |+||+|+||+++|++....... ...........|.+++.+|+|+|++++++++ ..+++
T Consensus 135 ~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~t 210 (223)
T 3uce_A 135 AAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYMT 210 (223)
T ss_dssp HHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTCC
T ss_pred HHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCCC
Confidence 9999999999999987 9999999999999997654322 1234455667899999999999999999997 58999
Q ss_pred ccEEEeCCCcCCC
Q 024125 250 GQIISVDGGFTAN 262 (272)
Q Consensus 250 G~~i~~dgG~~~~ 262 (272)
|++|++|||++++
T Consensus 211 G~~i~vdgG~~~s 223 (223)
T 3uce_A 211 GTVIDVDGGALLG 223 (223)
T ss_dssp SCEEEESTTGGGC
T ss_pred CcEEEecCCeecC
Confidence 9999999998763
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=299.06 Aligned_cols=236 Identities=32% Similarity=0.474 Sum_probs=201.4
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.++...++++|++|||||++|||++++++|+++|++|++++|+.+..++ + + ++.++ +|+ .+++++++++
T Consensus 10 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----~---~-~~~~~-~D~--~~~~~~~~~~ 78 (249)
T 1o5i_A 10 HHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----S---G-HRYVV-CDL--RKDLDLLFEK 78 (249)
T ss_dssp ------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----T---C-SEEEE-CCT--TTCHHHHHHH
T ss_pred hhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh----h---C-CeEEE-eeH--HHHHHHHHHH
Confidence 4455667899999999999999999999999999999999998743322 2 2 45666 999 4556666655
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+ .++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|
T Consensus 79 ~-----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 153 (249)
T 1o5i_A 79 V-----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTS 153 (249)
T ss_dssp S-----CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHH
T ss_pred h-----cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchH
Confidence 4 47999999999877778888999999999999999999999999999988877999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHH-HHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVD-KVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
++||++++.|+++++.|++++||+||+|+||+++|++..... +.... ......|.+++.+|+|+|+.+++|+++...
T Consensus 154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~ 231 (249)
T 1o5i_A 154 NSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL--SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKAS 231 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc--hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 999999999999999999999999999999999999976542 22233 455567888999999999999999998889
Q ss_pred CccccEEEeCCCcCC
Q 024125 247 YITGQIISVDGGFTA 261 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~ 261 (272)
+++|+++.+|||+++
T Consensus 232 ~~tG~~~~vdgG~~~ 246 (249)
T 1o5i_A 232 YLTGQTIVVDGGLSK 246 (249)
T ss_dssp TCCSCEEEESTTCCC
T ss_pred CCCCCEEEECCCccc
Confidence 999999999999765
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=304.41 Aligned_cols=242 Identities=26% Similarity=0.354 Sum_probs=201.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH-c
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK-F 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 92 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+. +
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 367999999999999999999999999999999999999988888888766778899999999999999999999886 7
Q ss_pred CCCccEEEECCCC--C-----CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh
Q 024125 93 NGKLNILVNNVGT--N-----IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 93 ~~~id~li~~ag~--~-----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~ 165 (272)
+++|+||||||. . ...++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+. +..
T Consensus 82 -g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~ 159 (260)
T 2qq5_A 82 -GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNV 159 (260)
T ss_dssp -TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSH
T ss_pred -CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCC
Confidence 789999999953 2 3457778888999999999999999999999999988777999999999887654 468
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHH-HHHH--hcCCCCCCCCHHHHHHHHHHHhc
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFV-DKVI--ARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
.|++||+++++|+++++.|++++||+||+|+||+++|+|........... .... ...+.++..+|+|+|++++||++
T Consensus 160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s 239 (260)
T 2qq5_A 160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT 239 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999975432211110 0001 12345556789999999999999
Q ss_pred CCC-CCccccEEEeCC
Q 024125 243 PAA-SYITGQIISVDG 257 (272)
Q Consensus 243 ~~~-~~~~G~~i~~dg 257 (272)
+.. .++||++|.+|+
T Consensus 240 ~~~~~~itG~~i~~~~ 255 (260)
T 2qq5_A 240 DPNILSLSGKVLPSCD 255 (260)
T ss_dssp CTTGGGGTTCEEEHHH
T ss_pred Ccccccccceeechhh
Confidence 876 489999998763
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=299.57 Aligned_cols=247 Identities=25% Similarity=0.406 Sum_probs=219.6
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+.+++++|++|||||+||||++++++|+++|++|++++| +.+..++..+++...+.++.++.+|++|.++++++++++.
T Consensus 15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV 94 (274)
T ss_dssp -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 446789999999999999999999999999999999999 7888888888887767788899999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYG 168 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~ 168 (272)
+++ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++ + ++||++||..+. .+.++...|+
T Consensus 95 ~~~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~~~~~~Y~ 171 (274)
T 1ja9_A 95 SHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGIPNHALYA 171 (274)
T ss_dssp HHH-SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSCCSCHHHH
T ss_pred HHc-CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCCCCCchHH
Confidence 998 68999999999877777888899999999999999999999999999973 3 899999999888 7778889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----------C-HHHHHHHHhcCCCCCCCCHHHHHHHH
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----------N-KEFVDKVIARTPLQRVGEPEEVASLV 237 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~e~a~~~ 237 (272)
++|++++.++++++.++++++|++++++||++.|++...... . ++.........+.+++.+|+|+++++
T Consensus 172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i 251 (274)
T 1ja9_A 172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAV 251 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence 999999999999999999999999999999999999763111 1 33344455667888899999999999
Q ss_pred HHHhcCCCCCccccEEEeCCCcC
Q 024125 238 AYLCLPAASYITGQIISVDGGFT 260 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dgG~~ 260 (272)
.+++++...+++|+++++|||+.
T Consensus 252 ~~l~~~~~~~~~G~~~~v~gG~~ 274 (274)
T 1ja9_A 252 SALCQEESEWINGQVIKLTGGGI 274 (274)
T ss_dssp HHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHhCcccccccCcEEEecCCcC
Confidence 99999888899999999999964
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=304.40 Aligned_cols=242 Identities=21% Similarity=0.299 Sum_probs=201.1
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
..+++ |++|||||++|||++++++|+++|++|++++|+.++++++.+++... .++.++.+|++|.++++++++++.+.
T Consensus 17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 94 (272)
T 2nwq_A 17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEE 94 (272)
T ss_dssp ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34566 99999999999999999999999999999999999888888777543 57888999999999999999999888
Q ss_pred cCCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-eEEEecCCCCCCCCCCChhhHH
Q 024125 92 FNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+ +++|+||||||+... .++.+.+.++|++++++|+.++++++++++|+|++++.| +||++||..+..+.++...|++
T Consensus 95 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~a 173 (272)
T 2nwq_A 95 F-ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGG 173 (272)
T ss_dssp G-SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHH
T ss_pred h-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHH
Confidence 8 699999999998653 778889999999999999999999999999999887778 9999999999998889999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
||+++++|+++++.|++++||+||+|+||+++|++...... ..+... .........+|+|+|+.++||+++ ..++
T Consensus 174 sKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~---~~~~~~~~~~pedvA~~v~~l~s~-~~~~ 249 (272)
T 2nwq_A 174 TKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYD---KTYAGAHPIQPEDIAETIFWIMNQ-PAHL 249 (272)
T ss_dssp HHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------CCCCBCHHHHHHHHHHHHTS-CTTE
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHH---HhhccCCCCCHHHHHHHHHHHhCC-CccC
Confidence 99999999999999999999999999999999998653211 111111 111122357999999999999986 5789
Q ss_pred cccEEEeCCCcC
Q 024125 249 TGQIISVDGGFT 260 (272)
Q Consensus 249 ~G~~i~~dgG~~ 260 (272)
+|+.|.+|+|..
T Consensus 250 ~g~~i~v~~~~~ 261 (272)
T 2nwq_A 250 NINSLEIMPVSQ 261 (272)
T ss_dssp EEEEEEEEETTE
T ss_pred ccceEEEeeccC
Confidence 999999998843
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=304.71 Aligned_cols=249 Identities=35% Similarity=0.502 Sum_probs=217.3
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-----CCCeEEEEEecCCCHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-----KGFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
+..+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|++|.++++++++
T Consensus 13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 92 (303)
T 1yxm_A 13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 92 (303)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence 3468899999999999999999999999999999999999998888888765 35678999999999999999999
Q ss_pred HHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
++.+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.+.+++.++||++||.. ..+.+....
T Consensus 93 ~~~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~ 170 (303)
T 1yxm_A 93 STLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVH 170 (303)
T ss_dssp HHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHH
T ss_pred HHHHHc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchh
Confidence 999998 689999999998777778888999999999999999999999999965544458999999998 777888899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH-hhhh-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE-RLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
|+++|+++++++++++.++.++||+|++++||++.|++.. .... .+..........|.+++.+|+|+|+++++|+++.
T Consensus 171 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~ 250 (303)
T 1yxm_A 171 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA 250 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcc
Confidence 9999999999999999999999999999999999999532 1111 1122223344567888999999999999999988
Q ss_pred CCCccccEEEeCCCcCCC
Q 024125 245 ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~ 262 (272)
..+++|+++.+|||..+.
T Consensus 251 ~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 251 ASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp GTTCCSCEEEESTTGGGC
T ss_pred cccCCCcEEEECCCeecc
Confidence 899999999999998765
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=293.89 Aligned_cols=240 Identities=31% Similarity=0.439 Sum_probs=211.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|++|||||+||||++++++|+++|++|++++|+.+..++..+++ ..+.++.+|++|.++++++++ .+
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~ 74 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc
Confidence 3578999999999999999999999999999999999988877665543 134456899999999988876 34
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||
T Consensus 75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 153 (244)
T 1cyd_A 75 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK 153 (244)
T ss_dssp -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHH
Confidence 6899999999987777788889999999999999999999999999998766 68999999999998888899999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.++++++.++++++|++++++||++.|++.......+..........|.+++.+|+|+++++++++++...+++|+
T Consensus 154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 233 (244)
T 1cyd_A 154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGG 233 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSS
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCC
Confidence 99999999999999999999999999999999976543444454556666788899999999999999999888899999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
.+.+|||+++
T Consensus 234 ~~~v~gG~~~ 243 (244)
T 1cyd_A 234 GILVDAGYLA 243 (244)
T ss_dssp EEEESTTGGG
T ss_pred EEEECCCccC
Confidence 9999999865
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-44 Score=308.42 Aligned_cols=249 Identities=26% Similarity=0.292 Sum_probs=201.2
Q ss_pred CCCCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHH------H-HHHHHHHHhC--CCe---EEEEEe----
Q 024125 12 RWSLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVE------L-NKCLKEWQSK--GFV---VSGSVC---- 73 (272)
Q Consensus 12 ~~~l~~k~vlItGa--~~giG~~ia~~l~~~G~~v~~~~r~~~~------~-~~~~~~~~~~--~~~---~~~~~~---- 73 (272)
.+++++|++||||| ++|||++++++|+++|++|++++|+... . ....+++.+. +.. +.++.+
T Consensus 4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (315)
T 2o2s_A 4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF 83 (315)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence 46689999999999 8999999999999999999999986421 0 0011111111 110 123333
Q ss_pred --------cCC--------CHHHHHHHHHHHHHHcCCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHH
Q 024125 74 --------DAA--------SPDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQ 135 (272)
Q Consensus 74 --------D~~--------~~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 135 (272)
|++ |.++++++++++.+++ +++|++|||||+.. ..++.+.+.++|++++++|+.+++.+++
T Consensus 84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 162 (315)
T 2o2s_A 84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ 162 (315)
T ss_dssp SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHH-CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred cccchhhhhhhcccccccCCHHHHHHHHHHHHHhc-CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence 333 2568899999999998 69999999999753 5677889999999999999999999999
Q ss_pred HHHHHHHcCCCCeEEEecCCCCCCCCCCC-hhhHHHHHHHHHHHHHHHHHHcc-CCeeEEEeeCCcccChhhHhhhhC--
Q 024125 136 LVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVERLLEN-- 211 (272)
Q Consensus 136 ~~~~~~~~~~~g~ii~vsS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~PG~v~t~~~~~~~~~-- 211 (272)
+++|+|++. |+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|+|.......
T Consensus 163 ~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~ 240 (315)
T 2o2s_A 163 HFGPIMNEG--GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGE 240 (315)
T ss_dssp HHSTTEEEE--EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSS
T ss_pred HHHHHHhcC--CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccccc
Confidence 999999763 899999999998888777 58999999999999999999985 899999999999999997654311
Q ss_pred ----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 212 ----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 212 ----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
...........|.+++.+|+|+|+.++||+++...++||++|.+|||+++..
T Consensus 241 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 296 (315)
T 2o2s_A 241 KSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMG 296 (315)
T ss_dssp SCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred chhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeeec
Confidence 1222233445788999999999999999999999999999999999987753
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=294.65 Aligned_cols=234 Identities=22% Similarity=0.285 Sum_probs=196.3
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||++|||++++++|+++|++|++++|+.+++++..+++. .++.++.+|++|.++++++++++.+.+ +++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 76 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEW-CNID 76 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTT-CCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence 689999999999999999999999999999999988887776663 467888999999999999999998888 6899
Q ss_pred EEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 98 ILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 98 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.++...|++||+++++
T Consensus 77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 156 (248)
T 3asu_A 77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_dssp EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence 999999986 3567788899999999999999999999999999988777999999999999998999999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCccc-ChhhHhhhh-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTK-TSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
|+++++.|++++||+||+|+||+++ |++...... ..+.... ........+|+|+|+.++||+++ ..+++|+.+.
T Consensus 157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~---~~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~i~ 232 (248)
T 3asu_A 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK---TYQNTVALTPEDVSEAVWWVSTL-PAHVNINTLE 232 (248)
T ss_dssp HHHHHHHHTTTSCCEEEEEEECSBCC-------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEEE
T ss_pred HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHH---HHhccCCCCHHHHHHHHHHHhcC-CccceeeEEE
Confidence 9999999999999999999999999 998643211 1111111 11122346999999999999986 5789999999
Q ss_pred eCCCc
Q 024125 255 VDGGF 259 (272)
Q Consensus 255 ~dgG~ 259 (272)
++++.
T Consensus 233 v~~~~ 237 (248)
T 3asu_A 233 MMPVT 237 (248)
T ss_dssp ECCTT
T ss_pred Ecccc
Confidence 99874
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=311.32 Aligned_cols=248 Identities=26% Similarity=0.313 Sum_probs=168.9
Q ss_pred CCCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCCh-----------HHHH-----------HHHHHHHhCCC--
Q 024125 13 WSLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNE-----------VELN-----------KCLKEWQSKGF-- 66 (272)
Q Consensus 13 ~~l~~k~vlItGa--~~giG~~ia~~l~~~G~~v~~~~r~~-----------~~~~-----------~~~~~~~~~~~-- 66 (272)
+++++|++||||| ++|||++++++|+++|++|++++|++ ++++ +..+++...+.
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL 84 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence 5688999999999 89999999999999999999998753 1222 12222322211
Q ss_pred -eEEEEEec------------CCC--------HHHHHHHHHHHHHHcCCCccEEEECCCCCC--CCCCCCCCHHHHHHHH
Q 024125 67 -VVSGSVCD------------AAS--------PDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIM 123 (272)
Q Consensus 67 -~~~~~~~D------------~~~--------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~ 123 (272)
....+.+| +++ .++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++++
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 163 (319)
T 2ptg_A 85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYLAAV 163 (319)
T ss_dssp CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHH-SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence 02333333 333 347889999999998 69999999999753 5677889999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC-hhhHHHHHHHHHHHHHHHHHHcc-CCeeEEEeeCCccc
Q 024125 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTK 201 (272)
Q Consensus 124 ~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~PG~v~ 201 (272)
++|+.++++++++++|+|++. |+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+++
T Consensus 164 ~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~ 241 (319)
T 2ptg_A 164 SSSSYSFVSLLQHFLPLMKEG--GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK 241 (319)
T ss_dssp HHHTHHHHHHHHHHGGGEEEE--EEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred hHhhHHHHHHHHHHHHHHhcC--ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCcc
Confidence 999999999999999999763 899999999998888777 68999999999999999999985 89999999999999
Q ss_pred ChhhHhhhhC--HHH----HHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 202 TSLVERLLEN--KEF----VDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 202 t~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
|+|....... +.+ ........|.+++.+|+|+|++++||+++...++||++|.+|||+++.+
T Consensus 242 T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 309 (319)
T 2ptg_A 242 SRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAMG 309 (319)
T ss_dssp -------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC-
T ss_pred ChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceeec
Confidence 9997654211 111 1112234678889999999999999999989999999999999998764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=328.85 Aligned_cols=234 Identities=25% Similarity=0.386 Sum_probs=204.2
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh---------HHHHHHHHHHHhCCCeEEEEEecCCCHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---------VELNKCLKEWQSKGFVVSGSVCDAASPDQRE 82 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 82 (272)
.+++++|++|||||++|||+++|+.|+++|++|++++|+. +.+++..+++...+.++. +|++|.++++
T Consensus 3 ~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~ 79 (604)
T 2et6_A 3 PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGD 79 (604)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHH
Confidence 3568999999999999999999999999999999998765 567777777776665543 5777777788
Q ss_pred HHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC
Q 024125 83 KLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG 162 (272)
Q Consensus 83 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~ 162 (272)
++++++.+++ +++|+||||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.|+|||+||..+..+.+
T Consensus 80 ~~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~ 158 (604)
T 2et6_A 80 KIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF 158 (604)
T ss_dssp HHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred HHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence 8999999999 799999999999877888999999999999999999999999999999988789999999999988889
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+...|++||+|+.+|+++++.|++++||+||+|+|| +.|+|...... ++.. ...+|+|++..+.||++
T Consensus 159 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~-~~~~----------~~~~pe~vA~~v~~L~s 226 (604)
T 2et6_A 159 GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP-PPML----------EKLGPEKVAPLVLYLSS 226 (604)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC-HHHH----------TTCSHHHHHHHHHHHTS
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC-hhhh----------ccCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999998 69998754321 2111 13589999999999999
Q ss_pred CCCCCccccEEEeCCCcCCC
Q 024125 243 PAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~~ 262 (272)
+. .++||++|.+|||+...
T Consensus 227 ~~-~~itG~~~~vdgG~~~~ 245 (604)
T 2et6_A 227 AE-NELTGQFFEVAAGFYAQ 245 (604)
T ss_dssp SS-CCCCSCEEEEETTEEEE
T ss_pred Cc-ccCCCCEEEECCCeEEE
Confidence 88 99999999999997654
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=302.16 Aligned_cols=250 Identities=23% Similarity=0.278 Sum_probs=201.3
Q ss_pred CCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHH-------HHHHHHHhC--C---CeEEEEEec---
Q 024125 12 RWSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELN-------KCLKEWQSK--G---FVVSGSVCD--- 74 (272)
Q Consensus 12 ~~~l~~k~vlItGa~--~giG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~--~---~~~~~~~~D--- 74 (272)
.+++++|++|||||+ +|||++++++|+++|++|++++|+..... +..+++.+. + .......+|
T Consensus 3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T 1d7o_A 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence 356899999999999 99999999999999999999987642110 000111110 1 112333333
Q ss_pred -----CC----C--------HHHHHHHHHHHHHHcCCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHH
Q 024125 75 -----AA----S--------PDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQ 135 (272)
Q Consensus 75 -----~~----~--------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 135 (272)
++ | .++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++++++|+.+++++++
T Consensus 83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 161 (297)
T 1d7o_A 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred cchhhhhhhhhccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence 32 2 567889999999998 68999999999743 5677888999999999999999999999
Q ss_pred HHHHHHHcCCCCeEEEecCCCCCCCCCCC-hhhHHHHHHHHHHHHHHHHHHcc-CCeeEEEeeCCcccChhhHhhhhCHH
Q 024125 136 LVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVERLLENKE 213 (272)
Q Consensus 136 ~~~~~~~~~~~g~ii~vsS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~PG~v~t~~~~~~~~~~~ 213 (272)
+++|+|++. |+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++.......++
T Consensus 162 ~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~ 239 (297)
T 1d7o_A 162 HFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT 239 (297)
T ss_dssp HHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHH
T ss_pred HHHHHhccC--ceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHH
Confidence 999999653 899999999998888887 69999999999999999999985 89999999999999998654211123
Q ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCCCC
Q 024125 214 FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~~ 264 (272)
.........|.+++.+|+|+|+.++||+++...+++|++|.+|||+++.+.
T Consensus 240 ~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~~ 290 (297)
T 1d7o_A 240 MIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGV 290 (297)
T ss_dssp HHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred HHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceeecC
Confidence 334444567888999999999999999998899999999999999887643
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=289.34 Aligned_cols=234 Identities=24% Similarity=0.324 Sum_probs=213.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
++|++|||||++|||++++++|+++|+ +|++++|+.+.++++.+++...+.++.++.+|++|.++++++++++
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 368999999999999999999999999 9999999999888888888776778999999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
.+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|+
T Consensus 81 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~ 159 (244)
T 2bd0_A 81 VERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC 159 (244)
T ss_dssp HHHT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred HHhC-CCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhH
Confidence 9998 689999999999877788888999999999999999999999999999887779999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+||+++++|+++++.++.++||+|++++||++.|++........ ..++.+|+|+|+.+++++++...++
T Consensus 160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~~~~~~dva~~~~~l~~~~~~~~ 228 (244)
T 2bd0_A 160 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPEDIAAPVVQAYLQPSRTV 228 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----------cccCCCHHHHHHHHHHHHhCCcccc
Confidence 99999999999999999999999999999999999875432110 1256799999999999999999999
Q ss_pred cccEEEeCCCcCC
Q 024125 249 TGQIISVDGGFTA 261 (272)
Q Consensus 249 ~G~~i~~dgG~~~ 261 (272)
+|+.+..++|..+
T Consensus 229 ~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 229 VEEIILRPTSGDI 241 (244)
T ss_dssp EEEEEEEETTCCC
T ss_pred chheEEecccccc
Confidence 9999999998765
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=296.56 Aligned_cols=229 Identities=24% Similarity=0.356 Sum_probs=200.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 106 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL- 106 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC-
Confidence 4889999999999999999999999999999999999999999999998888889999999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||..+..+.++...|++||+
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 186 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKY 186 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHH
Confidence 6999999999998888888999999999999999999999999999998766 689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH--------HHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE--------FVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
|+++|+++++.|++++||+|++|+||+++|++......... ....+..........+|+|+|+.++.++..
T Consensus 187 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~ 265 (301)
T 3tjr_A 187 GVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILA 265 (301)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999865321100 001111112233467999999999998864
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-43 Score=325.50 Aligned_cols=232 Identities=28% Similarity=0.423 Sum_probs=199.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++||++|||||++|||+++|+.|+++|++|++++|.. .++..+++...+.++..+.+|++ ++.+++++++.+++
T Consensus 318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY 393 (604)
T ss_dssp CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence 468999999999999999999999999999999998632 34555666666667777788873 55677888888888
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.|+|||+||..+..+.++...|++||+
T Consensus 394 -G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa 472 (604)
T 2et6_A 394 -GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA 472 (604)
T ss_dssp -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence 7999999999998778889999999999999999999999999999999888899999999999989899999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
|+.+|+++++.|++++||+||+|+||. +|+|....... ......+|+|++..+.||+++... +||++
T Consensus 473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~-----------~~~~~~~pe~vA~~v~~L~s~~~~-itG~~ 539 (604)
T 2et6_A 473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE-----------QDKNLYHADQVAPLLVYLGTDDVP-VTGET 539 (604)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTTCC-CCSCE
T ss_pred HHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch-----------hhccCCCHHHHHHHHHHHhCCccC-CCCcE
Confidence 999999999999999999999999996 99986543211 012345899999999999999888 99999
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
|.+|||+...
T Consensus 540 ~~vdGG~~~~ 549 (604)
T 2et6_A 540 FEIGGGWIGN 549 (604)
T ss_dssp EEEETTEEEE
T ss_pred EEECCCeeEe
Confidence 9999997653
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=287.32 Aligned_cols=224 Identities=17% Similarity=0.177 Sum_probs=188.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++.+|+++.++++++++++. ...|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~----~~~d 74 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLD----SIPS 74 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCS----SCCS
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHh----hcCC
Confidence 68999999999999999999999999999999999888776655 4567788999999999999987763 3459
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++ ++||++||..+..+.++...|++||+|+++|
T Consensus 75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 153 (230)
T 3guy_A 75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGL 153 (230)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence 999999998888889999999999999999999999999999998776 4999999999999999999999999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc-CCCCCccccEEEeC
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL-PAASYITGQIISVD 256 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~-~~~~~~~G~~i~~d 256 (272)
+++++.|++++||+||+|+||+++|++...... ..+.+++.+|+|+|+.+.++++ +...+++|+++..+
T Consensus 154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~ 223 (230)
T 3guy_A 154 IESVRLELKGKPMKIIAVYPGGMATEFWETSGK----------SLDTSSFMSAEDAALMIHGALANIGNGYVSDITVNRE 223 (230)
T ss_dssp HHHHHHHTTTSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC-
T ss_pred HHHHHHHHHhcCeEEEEEECCcccChHHHhcCC----------CCCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCC
Confidence 999999999999999999999999999765422 1356778899999999999987 78899999999988
Q ss_pred CCc
Q 024125 257 GGF 259 (272)
Q Consensus 257 gG~ 259 (272)
...
T Consensus 224 ~~~ 226 (230)
T 3guy_A 224 GHH 226 (230)
T ss_dssp ---
T ss_pred CCC
Confidence 764
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=287.29 Aligned_cols=244 Identities=25% Similarity=0.319 Sum_probs=207.7
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC--CeEEEEEecCCCHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+..++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+ .++.++.+|++|.++++++++++
T Consensus 26 ~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 105 (279)
T 1xg5_A 26 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI 105 (279)
T ss_dssp TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence 3345899999999999999999999999999999999999998888888877654 56888999999999999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC--CeEEEecCCCCC--CCCCCC
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV--GSIVFISSVGGL--SHVGSG 164 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--g~ii~vsS~~~~--~~~~~~ 164 (272)
.+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+. .+.++.
T Consensus 106 ~~~~-g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 184 (279)
T 1xg5_A 106 RSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT 184 (279)
T ss_dssp HHHH-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGG
T ss_pred HHhC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCC
Confidence 9998 68999999999887788888899999999999999999999999999988764 899999999887 566777
Q ss_pred hhhHHHHHHHHHHHHHHHHHHc--cCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 165 SIYGATKAAMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~--~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
..|+++|++++.|+++++.|+. +.+|+|++|+||+++|++...... .+.. .....+..++.+|+|+|+.+++++
T Consensus 185 ~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~dvA~~i~~l~ 261 (279)
T 1xg5_A 185 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEK---AAATYEQMKCLKPEDVAEAVIYVL 261 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHH---HHHHHC---CBCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhH---HhhhcccccCCCHHHHHHHHHHHh
Confidence 8999999999999999999998 889999999999999999644322 2221 112234456789999999999999
Q ss_pred cCCCCCccccEEEeCCC
Q 024125 242 LPAASYITGQIISVDGG 258 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG 258 (272)
++...+.+|+....++|
T Consensus 262 ~~~~~~~~g~i~i~~~~ 278 (279)
T 1xg5_A 262 STPAHIQIGDIQMRPTG 278 (279)
T ss_dssp HSCTTEEEEEEEEEETT
T ss_pred cCCcceEeeeEEEccCC
Confidence 98777877865554443
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=297.93 Aligned_cols=235 Identities=19% Similarity=0.217 Sum_probs=189.8
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+.+.++++||++|||||++|||++++++|+++|++|++++|+.++.++..+++ +.++.++.+|++|.++++++++++
T Consensus 8 ~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~ 84 (291)
T 3rd5_A 8 AADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV 84 (291)
T ss_dssp GGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred hhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc
Confidence 34556799999999999999999999999999999999999998887766544 568899999999999999988765
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC--------
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-------- 160 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-------- 160 (272)
+++|+||||||+..+ ..+.+.++|++++++|+.++++++++++|+|.+ +||++||..+..+
T Consensus 85 -----~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~ 153 (291)
T 3rd5_A 85 -----SGADVLINNAGIMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLN 153 (291)
T ss_dssp -----CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTT
T ss_pred -----CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccccc
Confidence 589999999998542 355677889999999999999999999999864 8999999887654
Q ss_pred -----CCCChhhHHHHHHHHHHHHHHHHHHccCC--eeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCC-HHH
Q 024125 161 -----VGSGSIYGATKAAMNQLTRNLACEWAKDN--IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGE-PEE 232 (272)
Q Consensus 161 -----~~~~~~Y~~sK~a~~~~~~~la~el~~~~--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e 232 (272)
.++...|++||+|++.|+++++.|++++| |+||+|+||+++|++...... .. .......+.++... |+|
T Consensus 154 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~ 230 (291)
T 3rd5_A 154 WRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR--KL-GDALMSAATRVVATDADF 230 (291)
T ss_dssp CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CHHHHH
T ss_pred ccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch--HH-HHHHHHHHHHHHhCCHHH
Confidence 34567899999999999999999999888 999999999999999876422 11 12222345555554 999
Q ss_pred HHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 233 VASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 233 ~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+|++++|++++ ++++|+++.+|||+.-+
T Consensus 231 ~A~~~~~l~~~--~~~~G~~~~vdgG~~~~ 258 (291)
T 3rd5_A 231 GARQTLYAASQ--DLPGDSFVGPRFGYLGR 258 (291)
T ss_dssp HHHHHHHHHHS--CCCTTCEEEETTSSSSC
T ss_pred HHHHHHHHHcC--CCCCCceeCCcccccCc
Confidence 99999999987 48999999999997643
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-42 Score=289.12 Aligned_cols=238 Identities=25% Similarity=0.342 Sum_probs=200.2
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.+. +.++.++.+|++|.++++++++++.+.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999998888777777543 3468889999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCeEEEecCCCCCCCCCCChhhHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+++|+||||||... .++|++.+++|+.+++.+++.++|+|++++ .++||++||..+..+.++...|++
T Consensus 85 -g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 155 (267)
T 2gdz_A 85 -GRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA 155 (267)
T ss_dssp -SCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred -CCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH
Confidence 69999999999742 356889999999999999999999997653 589999999999988889999999
Q ss_pred HHHHHHHHHHHH--HHHHccCCeeEEEeeCCcccChhhHhhhhCHH------HHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 170 TKAAMNQLTRNL--ACEWAKDNIRTNSVAPWYTKTSLVERLLENKE------FVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 170 sK~a~~~~~~~l--a~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
||++++++++++ +.|+++.||+||+|+||+++|++......... .........+...+.+|+|+|+.+++|+
T Consensus 156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~ 235 (267)
T 2gdz_A 156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 235 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHh
Confidence 999999999995 68999999999999999999998765321110 0111111112234679999999999999
Q ss_pred cCCCCCccccEEEeCCCcCCCC
Q 024125 242 LPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
++. +++|+++.+|||..+..
T Consensus 236 s~~--~~~G~~~~v~gg~~~~~ 255 (267)
T 2gdz_A 236 EDD--ALNGAIMKITTSKGIHF 255 (267)
T ss_dssp HCT--TCSSCEEEEETTTEEEE
T ss_pred cCc--CCCCcEEEecCCCcccc
Confidence 864 58999999999987663
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-42 Score=297.98 Aligned_cols=234 Identities=25% Similarity=0.413 Sum_probs=204.4
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe---------eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC---------SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQRE 82 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~---------~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 82 (272)
.+++++|++|||||++|||++++++|+++|++|+++ +|+.++.++..+++...+..+ .+|+++.++++
T Consensus 4 ~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~ 80 (319)
T 1gz6_A 4 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGE 80 (319)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHH
Confidence 367899999999999999999999999999999996 457778888888887665543 47999999999
Q ss_pred HHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC
Q 024125 83 KLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG 162 (272)
Q Consensus 83 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~ 162 (272)
++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.|++.++++++|+|++++.++||++||..+..+.+
T Consensus 81 ~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~ 159 (319)
T 1gz6_A 81 KLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF 159 (319)
T ss_dssp HHHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred HHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC
Confidence 9999999998 699999999998777778888999999999999999999999999999888779999999998887888
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+...|++||++++.|+++++.|++++||+||+|+||++ |++.....+ ..... ..+|+|++++++||++
T Consensus 160 ~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~-~~~~~----------~~~p~dvA~~~~~l~s 227 (319)
T 1gz6_A 160 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP-EDLVE----------ALKPEYVAPLVLWLCH 227 (319)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC-HHHHH----------HSCGGGTHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC-hhhhc----------cCCHHHHHHHHHHHhC
Confidence 88999999999999999999999999999999999998 887654321 21111 2489999999999998
Q ss_pred CCCCCccccEEEeCCCcCCC
Q 024125 243 PAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~~ 262 (272)
+ ..+++|+++.+|||++..
T Consensus 228 ~-~~~~tG~~~~v~GG~~~~ 246 (319)
T 1gz6_A 228 E-SCEENGGLFEVGAGWIGK 246 (319)
T ss_dssp T-TCCCCSCEEEEETTEEEE
T ss_pred c-hhhcCCCEEEECCCeEEE
Confidence 7 458899999999997653
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=278.69 Aligned_cols=227 Identities=25% Similarity=0.294 Sum_probs=192.3
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
..+|++|||||+||||++++++|+++|++|++++|+.++++++.+++. ++..+.+|++|.++++++++++.+.+ +
T Consensus 3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 77 (234)
T 2ehd_A 3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAF-G 77 (234)
T ss_dssp -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHc-C
Confidence 457999999999999999999999999999999999888777665542 56778999999999999999999998 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++
T Consensus 78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 157 (234)
T 2ehd_A 78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGL 157 (234)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHH
Confidence 89999999998777788888999999999999999999999999999988889999999999998888999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
+.++++++.|+.++||++++++||+++|++..... .. . ...+|+|+|+.+++++++...+++|+.+.
T Consensus 158 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~---~-------~~~~~~dvA~~~~~l~~~~~~~~~g~~~~ 224 (234)
T 2ehd_A 158 LGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP---GQ---A-------WKLKPEDVAQAVLFALEMPGHAMVSEIEL 224 (234)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCCSSCCCEEEC
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc---cc---c-------CCCCHHHHHHHHHHHhCCCcccccceEEE
Confidence 99999999999999999999999999999865321 10 0 14699999999999999888999999876
Q ss_pred eCCCc
Q 024125 255 VDGGF 259 (272)
Q Consensus 255 ~dgG~ 259 (272)
.++..
T Consensus 225 ~~~~~ 229 (234)
T 2ehd_A 225 RPTRP 229 (234)
T ss_dssp CC---
T ss_pred eecCC
Confidence 65543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=289.42 Aligned_cols=238 Identities=24% Similarity=0.297 Sum_probs=201.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++++|++|||||+||||++++++|+++|++|++++|+.+.++++.+++ +.++.++.+|++|.++++++++++.+++
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~- 77 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARY- 77 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence 467899999999999999999999999999999999998877766543 4578889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||++
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 157 (281)
T 3m1a_A 78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAA 157 (281)
T ss_dssp SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHH
Confidence 68999999999987788889999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--------C---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--------N---KEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+++++++++.|++++||+|++++||+++|++...... . ...........+.+++.+|+|+|++++++++
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~ 237 (281)
T 3m1a_A 158 LEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALD 237 (281)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999998642110 0 1112334455677888999999999999997
Q ss_pred CCCCCccccEEEeCCC
Q 024125 243 PAASYITGQIISVDGG 258 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG 258 (272)
... .|..+.+.++
T Consensus 238 ~~~---~~~~~~l~s~ 250 (281)
T 3m1a_A 238 TEK---TPLRLALGGD 250 (281)
T ss_dssp SSS---CCSEEEESHH
T ss_pred CCC---CCeEEecCch
Confidence 543 3556665543
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=287.41 Aligned_cols=224 Identities=16% Similarity=0.100 Sum_probs=197.2
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN- 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 93 (272)
.++|++|||||++|||++++++|+++|++|++++|+.+..+ .....+.+|++|.++++++++++.+.++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 74 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGD 74 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999999875432 1456778999999999999999999884
Q ss_pred CCccEEEECCCCCCCCCC-CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPT-IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++ .+.+.++|++.+++|+.+++.++++++|+|++ .|+||++||..+..+.++...|++||+
T Consensus 75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~ 152 (241)
T 1dhr_A 75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKG 152 (241)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHH
Confidence 489999999998776777 77888999999999999999999999999965 389999999999999899999999999
Q ss_pred HHHHHHHHHHHHHc--cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 173 AMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 173 a~~~~~~~la~el~--~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
++++|+++++.|++ ++||+||+|+||+++|++....... .......+|+|+|+.+.+++++...+++|
T Consensus 153 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~vA~~v~~l~~~~~~~~~G 222 (241)
T 1dhr_A 153 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLEFLVETFHDWITGNKRPNSG 222 (241)
T ss_dssp HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHHHHHHHHHHHHTTTTCCCTT
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc----------hhhccCCCHHHHHHHHHHHhcCCCcCccc
Confidence 99999999999999 8999999999999999997654221 11223457999999999999999999999
Q ss_pred cEEEeCCCcC
Q 024125 251 QIISVDGGFT 260 (272)
Q Consensus 251 ~~i~~dgG~~ 260 (272)
+++.+|||..
T Consensus 223 ~~~~v~g~~~ 232 (241)
T 1dhr_A 223 SLIQVVTTDG 232 (241)
T ss_dssp CEEEEEEETT
T ss_pred eEEEEeCCCC
Confidence 9999999854
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=289.62 Aligned_cols=231 Identities=24% Similarity=0.306 Sum_probs=193.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCC--eEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF--VVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++...+. ++.++.+|+++.++++++++++.+
T Consensus 4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999888876554 789999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCeEEEecCCCCCCCCCCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISSVGGLSHVGSG 164 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~ii~vsS~~~~~~~~~~ 164 (272)
.+ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.++ +.|+||++||..+..+.++.
T Consensus 84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~ 162 (319)
T 3ioy_A 84 RF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP 162 (319)
T ss_dssp HT-CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS
T ss_pred hC-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC
Confidence 98 689999999999888899999999999999999999999999999999764 56899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHH---------HHhcCCC-CCCCCHHHHH
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDK---------VIARTPL-QRVGEPEEVA 234 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~e~a 234 (272)
..|++||+|+++|+++++.|+.++||+|++|+||+|+|++.......+..... .....+. ....+|+++|
T Consensus 163 ~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA 242 (319)
T 3ioy_A 163 GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIG 242 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHH
Confidence 99999999999999999999999999999999999999997643221111100 0000111 1126999999
Q ss_pred HHHHHHhcCC
Q 024125 235 SLVAYLCLPA 244 (272)
Q Consensus 235 ~~~~~l~~~~ 244 (272)
+.++.++...
T Consensus 243 ~~~~~al~~~ 252 (319)
T 3ioy_A 243 ARVIEAMKAN 252 (319)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999888643
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=280.33 Aligned_cols=228 Identities=24% Similarity=0.308 Sum_probs=199.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++|||||++|||++++++|+++|++|++++|+.+ . .++.++.+|++|.++++++++++ +.+ +++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~-~~~ 67 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEE-APL 67 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHH-SCE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-Hhh-CCc
Confidence 689999999999999999999999999999999864 1 23467899999999999999999 777 689
Q ss_pred cEEEECCCCCCCCCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---C---CeEEEecCCCCCCCCCCChh
Q 024125 97 NILVNNVGTNIRKPTIEYS----AEEYSKIMTTNFESTYHLCQLVYPLLKASG---V---GSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~---g~ii~vsS~~~~~~~~~~~~ 166 (272)
|++|||||.....++.+.+ .+++++.+++|+.++++++++++|.|.+++ . ++||++||..+..+.++...
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 147 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 147 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence 9999999987666665543 459999999999999999999999998764 3 39999999998888888999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhcCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~a~~~~~l~~~~~ 245 (272)
|++||++++.++++++.|++++||+|++++||++.|++..... +..........|. +++.+|+|+|+++++++++
T Consensus 148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-- 223 (242)
T 1uay_A 148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--EKAKASLAAQVPFPPRLGRPEEYAALVLHILEN-- 223 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc--hhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC--
Confidence 9999999999999999999999999999999999999976542 3334445556777 8899999999999999986
Q ss_pred CCccccEEEeCCCcCCC
Q 024125 246 SYITGQIISVDGGFTAN 262 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~ 262 (272)
.+++|+++.+|||+++.
T Consensus 224 ~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 224 PMLNGEVVRLDGALRMA 240 (242)
T ss_dssp TTCCSCEEEESTTCCCC
T ss_pred CCCCCcEEEEcCCeecC
Confidence 78999999999998775
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-42 Score=299.60 Aligned_cols=242 Identities=14% Similarity=0.058 Sum_probs=204.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeCChHHH------------HHHHHHHHhCCCeEEEEEecCCCHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVEL------------NKCLKEWQSKGFVVSGSVCDAASPDQ 80 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~-~G~~v~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~D~~~~~~ 80 (272)
.-.+|++|||||++|||+++++.|++ .|++|++++|+.+.. +...+++...+.++..+.+|++|.++
T Consensus 44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~ 123 (405)
T 3zu3_A 44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI 123 (405)
T ss_dssp TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 34689999999999999999999999 999999998875442 22344556667788899999999999
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHH
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTN-------------IRKPT---------------------IEYSAEEYSKIMTTN 126 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~N 126 (272)
++++++++.+.+ +++|+||||||.. ...++ .+.+.++|++++++|
T Consensus 124 v~~~v~~i~~~~-G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn 202 (405)
T 3zu3_A 124 KQLTIDAIKQDL-GQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM 202 (405)
T ss_dssp HHHHHHHHHHHT-SCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence 999999999999 7999999999974 23454 678999999999999
Q ss_pred hHHHH-HHHHHHHHH-HHcCCCCeEEEecCCCCCCCCCCC--hhhHHHHHHHHHHHHHHHHHHccC-CeeEEEeeCCccc
Q 024125 127 FESTY-HLCQLVYPL-LKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKD-NIRTNSVAPWYTK 201 (272)
Q Consensus 127 ~~~~~-~l~~~~~~~-~~~~~~g~ii~vsS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~el~~~-~i~v~~v~PG~v~ 201 (272)
..+.+ .+++++++. |.+ +.|+|||+||+.+..+.+.. ..|++||+++++|+|+++.||+++ |||||+|+||++.
T Consensus 203 ~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~ 281 (405)
T 3zu3_A 203 GGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVV 281 (405)
T ss_dssp SSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCC
T ss_pred chhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCc
Confidence 99998 788887754 443 45899999999998888877 999999999999999999999999 9999999999999
Q ss_pred ChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 202 TSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 202 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
|++...+...+.+..... .++++.++||+++..+.+|+++ ++.|+.+.+|++..++
T Consensus 282 T~~s~~ip~~p~y~~~l~--~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r 337 (405)
T 3zu3_A 282 SQASSAIPMMPLYLSLLF--KVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLR 337 (405)
T ss_dssp CHHHHTSTTHHHHHHHHH--HHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred CchhhcCCCCcHHHHHHH--HHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence 999876643333333222 2688899999999999999976 6789999999987765
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-42 Score=286.67 Aligned_cols=224 Identities=17% Similarity=0.162 Sum_probs=196.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+..+|++|||||++|||++++++|+++|++|++++|+.++.+ -..+.+|++|.++++++++++.+.+
T Consensus 18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~ 85 (251)
T 3orf_A 18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKS 85 (251)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHc
Confidence 3456899999999999999999999999999999999876432 1246789999999999999999998
Q ss_pred CCCccEEEECCCCCCCCC-CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKP-TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|+||||||+....+ +.+.+.++|++.+++|+.++++++++++|+|++ .|+||++||..+..+.++...|++||
T Consensus 86 -g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (251)
T 3orf_A 86 -IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATK 162 (251)
T ss_dssp -CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred -CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHH
Confidence 69999999999865554 677889999999999999999999999999966 37999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc--cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC-CCCCc
Q 024125 172 AAMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP-AASYI 248 (272)
Q Consensus 172 ~a~~~~~~~la~el~--~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~-~~~~~ 248 (272)
+|++.|+++++.|++ ++||+|++|+||+++|++....... .+.+++.+|+|+|+.+++|+++ ...++
T Consensus 163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~~~dva~~i~~l~~~~~~~~~ 232 (251)
T 3orf_A 163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD----------ANFDDWTPLSEVAEKLFEWSTNSDSRPT 232 (251)
T ss_dssp HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT----------SCGGGSBCHHHHHHHHHHHHHCGGGCCC
T ss_pred HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc----------ccccccCCHHHHHHHHHHHhcCccccCC
Confidence 999999999999987 8899999999999999997654332 3556778999999999999998 88999
Q ss_pred cccEEEeCCCcCC
Q 024125 249 TGQIISVDGGFTA 261 (272)
Q Consensus 249 ~G~~i~~dgG~~~ 261 (272)
+|+++.+++|...
T Consensus 233 tG~~i~v~~g~~~ 245 (251)
T 3orf_A 233 NGSLVKFETKSKV 245 (251)
T ss_dssp TTCEEEEEEETTE
T ss_pred cceEEEEecCCcc
Confidence 9999999987543
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=283.48 Aligned_cols=223 Identities=14% Similarity=0.130 Sum_probs=195.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (272)
++|++|||||++|||++++++|+++|++|++++|+.+..+ .....+.+|++|.++++++++++.+.++ +
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g 71 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQGS 71 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 5799999999999999999999999999999999876532 1356678999999999999999999883 4
Q ss_pred CccEEEECCCCCCCCCC-CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPT-IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
++|+||||||.....++ .+.+.++|++.+++|+.+++.++++++|+|++ .++||++||..+..+.++...|++||++
T Consensus 72 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a 149 (236)
T 1ooe_A 72 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAA 149 (236)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHH
Confidence 89999999998776777 67788999999999999999999999999965 3799999999999998999999999999
Q ss_pred HHHHHHHHHHHHc--cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHH-HHhcCCCCCccc
Q 024125 174 MNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVA-YLCLPAASYITG 250 (272)
Q Consensus 174 ~~~~~~~la~el~--~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~-~l~~~~~~~~~G 250 (272)
+++|+++++.|++ ++||+|++|+||+++|++....... .......+|+|+|+.++ +|+++...+++|
T Consensus 150 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G 219 (236)
T 1ooe_A 150 VHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRPSSG 219 (236)
T ss_dssp HHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTT
T ss_pred HHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC----------ccccccCCHHHHHHHHHHHHcCCCcccccc
Confidence 9999999999998 8999999999999999997654221 11234568999999998 555888999999
Q ss_pred cEEEeCCCcC
Q 024125 251 QIISVDGGFT 260 (272)
Q Consensus 251 ~~i~~dgG~~ 260 (272)
++|.+|||..
T Consensus 220 ~~~~v~gg~~ 229 (236)
T 1ooe_A 220 ALLKITTENG 229 (236)
T ss_dssp CEEEEEEETT
T ss_pred cEEEEecCCC
Confidence 9999999864
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=283.77 Aligned_cols=233 Identities=20% Similarity=0.238 Sum_probs=192.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChH--HHHHHHHHHHhCCCeEEEEEecCCCH-HHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEV 88 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~ 88 (272)
|++++|++|||||++|||++++++|+++|++ |++++|+.+ ..+++.+.. .+.++.++.+|++|. ++++++++++
T Consensus 1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T 1sby_A 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN--PKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC--TTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC--CCceEEEEEEecCCChHHHHHHHHHH
Confidence 4578999999999999999999999999996 999999863 233332211 145788899999998 9999999999
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCeEEEecCCCCCCCCCCCh
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~ii~vsS~~~~~~~~~~~ 165 (272)
.+.+ +++|+||||||.. +.+++++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.++..
T Consensus 79 ~~~~-g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 149 (254)
T 1sby_A 79 FDQL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP 149 (254)
T ss_dssp HHHH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSH
T ss_pred HHhc-CCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCch
Confidence 9998 6899999999973 3467899999999999999999999997653 58999999999999989999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
.|++||++++.|+++++.++.++||+|++|+||+++|++...... ..+.........| ..+|+|+|+.++++++
T Consensus 150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dvA~~i~~~~~ 226 (254)
T 1sby_A 150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP---TQTSEQCGQNFVKAIE 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSC---CEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCC---CCCHHHHHHHHHHHHH
Confidence 999999999999999999998889999999999999999764311 0111222223333 3489999999999985
Q ss_pred CCCCCccccEEEeCCCcCCC
Q 024125 243 PAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~~ 262 (272)
.+.+|+++.+|||+..+
T Consensus 227 ---~~~~G~~~~v~gG~~~~ 243 (254)
T 1sby_A 227 ---ANKNGAIWKLDLGTLEA 243 (254)
T ss_dssp ---HCCTTCEEEEETTEEEE
T ss_pred ---cCCCCCEEEEeCCceeE
Confidence 57899999999996443
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-42 Score=319.79 Aligned_cols=240 Identities=24% Similarity=0.343 Sum_probs=192.6
Q ss_pred cccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC---------ChHHHHHHHHHHHhCCCeEEEEEecCCC
Q 024125 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR---------NEVELNKCLKEWQSKGFVVSGSVCDAAS 77 (272)
Q Consensus 7 ~~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 77 (272)
..+...++++||++|||||++|||+++|++|+++|++|++++| +.+..++..+++...+..+ .+|+++
T Consensus 9 ~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d 85 (613)
T 3oml_A 9 SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNS 85 (613)
T ss_dssp ------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCC
T ss_pred cCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCC
Confidence 3445667899999999999999999999999999999999987 6777788888887766554 379999
Q ss_pred HHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
.++++++++++.+.+ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+
T Consensus 86 ~~~~~~~~~~~~~~~-g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~ 164 (613)
T 3oml_A 86 VIDGAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSG 164 (613)
T ss_dssp GGGHHHHHC-----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHH
T ss_pred HHHHHHHHHHHHHHC-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence 999999999999998 6999999999998888899999999999999999999999999999999988899999999999
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 024125 158 LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLV 237 (272)
Q Consensus 158 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~ 237 (272)
..+.++...|++||+|+++|+++++.|++++||+||+|+||.+ |+|...... ... ....+|+|+|+++
T Consensus 165 ~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~-~~~----------~~~~~pedvA~~v 232 (613)
T 3oml_A 165 IYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP-DIL----------FNELKPKLIAPVV 232 (613)
T ss_dssp HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC-HHH----------HTTCCGGGTHHHH
T ss_pred cCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc-hhh----------hhcCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999974 666544322 111 1234899999999
Q ss_pred HHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 238 AYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
+||+++. .++||++|.+|||++...
T Consensus 233 ~~L~s~~-~~~tG~~i~vdGG~~~~~ 257 (613)
T 3oml_A 233 AYLCHES-CEDNGSYIESAAGWATKL 257 (613)
T ss_dssp HHTTSTT-CCCCSCEEEEETTEEEEE
T ss_pred HHhcCCC-cCCCceEEEECCCeEEEE
Confidence 9999988 899999999999988763
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=278.18 Aligned_cols=223 Identities=22% Similarity=0.211 Sum_probs=190.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++|++|||||++|||++++++|+++| ++|++++|+.+..+++.+. .+.++.++.+|+++.++++++++++.+.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV- 77 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhc-
Confidence 57999999999999999999999999 9999999998876654321 24578889999999999999999999988
Q ss_pred C--CccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------C-----CCeEEEecCCCCCC
Q 024125 94 G--KLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------G-----VGSIVFISSVGGLS 159 (272)
Q Consensus 94 ~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~-----~g~ii~vsS~~~~~ 159 (272)
+ ++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|+|+++ + .++||++||..+..
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 157 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence 5 8999999999876 6778888999999999999999999999999999876 4 68999999998877
Q ss_pred CC-------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHH
Q 024125 160 HV-------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEE 232 (272)
Q Consensus 160 ~~-------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 232 (272)
+. ++...|++||++++.|+++++.++.++||+|++++||+++|++... ....+|+|
T Consensus 158 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~ 220 (250)
T 1yo6_A 158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------NAALTVEQ 220 (250)
T ss_dssp TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------HH
T ss_pred CCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------CCCCCHHH
Confidence 65 5778999999999999999999999999999999999999998642 12458999
Q ss_pred HHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 233 VASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 233 ~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
+|+.+++++++...+++|+++.+|||.
T Consensus 221 ~a~~~~~~~~~~~~~~~G~~~~~~g~~ 247 (250)
T 1yo6_A 221 STAELISSFNKLDNSHNGRFFMRNLKP 247 (250)
T ss_dssp HHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred HHHHHHHHHhcccccCCCeEEEECCcC
Confidence 999999999988888999999999985
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-42 Score=302.09 Aligned_cols=244 Identities=18% Similarity=0.112 Sum_probs=202.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeCChHHHH------------HHHHHHHhCCCeEEEEEecCCCHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVELN------------KCLKEWQSKGFVVSGSVCDAASPDQRE 82 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~-~G~~v~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~D~~~~~~~~ 82 (272)
.+|++|||||++|||+++++.|++ .|++|++++|+.+..+ .+.+++...+.++..+.+|++|.++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 589999999999999999999999 9999999998765432 234556666778899999999999999
Q ss_pred HHHHHHHHHcCCCccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHHhH
Q 024125 83 KLIQEVGSKFNGKLNILVNNVGTN-------------IRKPT---------------------IEYSAEEYSKIMTTNFE 128 (272)
Q Consensus 83 ~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~N~~ 128 (272)
++++++.+.++|++|+||||||.. ...++ .+.+.++|++++++|..
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 999999999844899999999872 23344 35789999999999999
Q ss_pred HHH-HHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC--hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhh
Q 024125 129 STY-HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (272)
Q Consensus 129 ~~~-~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~ 205 (272)
+.+ .+++++++.+...+.|+|||+||+.+..+.+.. ..|++||+|+.+|+++++.||+++|||||+|+||+++|++.
T Consensus 220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~ 299 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS 299 (422)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence 987 788887765333345899999999998877765 89999999999999999999999999999999999999998
Q ss_pred HhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc-ccEEEeCCCcCCC
Q 024125 206 ERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT-GQIISVDGGFTAN 262 (272)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~-G~~i~~dgG~~~~ 262 (272)
..+...+...... ..|+++.++|||++..+.||+++. -|.+ |+...+|++..++
T Consensus 300 ~~ip~~~~~~~~~--~~~m~r~G~pEdva~~v~~L~sd~-ly~~~~~~~~~d~~~~~r 354 (422)
T 3s8m_A 300 AAIPVMPLYISMV--YKIMKEKGLHEGTIEQLDRLFRER-LYRQDGQPAEVDEQNRLR 354 (422)
T ss_dssp GGSTHHHHHHHHH--HHHHHHTTCCCCHHHHHHHHHHHT-TTCTTCCCCCCCTTSCEE
T ss_pred hcCCCChHHHHHH--HhhhcCCcChHHHHHHHHHHhcch-hhccCCCCcccCCCCCCc
Confidence 7664333322222 237889999999999999999874 3765 7776688887765
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=286.04 Aligned_cols=240 Identities=20% Similarity=0.236 Sum_probs=190.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-----hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-----EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
|++++|++|||||++|||++++++|+++|++|++++|+ .+.++++.+.+...+.++..+.+|++|.+++++++++
T Consensus 1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 45678999999999999999999999999999987664 5666777776666677899999999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-CCCCChh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGSI 166 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-~~~~~~~ 166 (272)
+.+++ +++|+||||||+...+++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+.. ..++...
T Consensus 81 ~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~ 159 (324)
T 3u9l_A 81 IIGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP 159 (324)
T ss_dssp HHHHH-SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHH
T ss_pred HHHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchh
Confidence 99999 799999999999888889999999999999999999999999999999988889999999998874 4566789
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHH----------------HHHHHHhcCCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKE----------------FVDKVIARTPLQR 226 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~----------------~~~~~~~~~~~~~ 226 (272)
|++||+|+++|+++++.|++++||+|++|+||++.|++...... ... ....+.. ....
T Consensus 160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~ 237 (324)
T 3u9l_A 160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAA--IVPP 237 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHH--TSCT
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHH--hcCC
Confidence 99999999999999999999999999999999999776421100 010 0111111 1122
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccccEEEeC
Q 024125 227 VGEPEEVASLVAYLCLPAASYITGQIISVD 256 (272)
Q Consensus 227 ~~~~~e~a~~~~~l~~~~~~~~~G~~i~~d 256 (272)
..+|+++|++++.++..... .....+.++
T Consensus 238 ~~~p~~vA~aiv~~~~~~~~-~~~~~~~~g 266 (324)
T 3u9l_A 238 DADVSLVADAIVRVVGTASG-KRPFRVHVD 266 (324)
T ss_dssp TCCTHHHHHHHHHHHTSCTT-CCCSEEEEC
T ss_pred CCCHHHHHHHHHHHhcCCCC-CCCeEEEeC
Confidence 35889999999988864321 224555554
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=279.50 Aligned_cols=225 Identities=24% Similarity=0.294 Sum_probs=199.3
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
++...+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|++|.+++++++++
T Consensus 22 ~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 101 (272)
T 1yb1_A 22 MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK 101 (272)
T ss_dssp ---CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHH
Confidence 34556789999999999999999999999999999999999999998888888877777889999999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+.+.+ +++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|
T Consensus 102 ~~~~~-g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y 180 (272)
T 1yb1_A 102 VKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAY 180 (272)
T ss_dssp HHHHT-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHH
T ss_pred HHHHC-CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhH
Confidence 99998 68999999999877777788889999999999999999999999999998888999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHc---cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 168 GATKAAMNQLTRNLACEWA---KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~---~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
++||++++.++++++.|+. +.||+|++|+||+++|++... .. .+.+++.+|+|+|+.+++++...
T Consensus 181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~---~~---------~~~~~~~~~~dva~~i~~~~~~~ 248 (272)
T 1yb1_A 181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---PS---------TSLGPTLEPEEVVNRLMHGILTE 248 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---TH---------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc---cc---------ccccCCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999997 679999999999999998532 10 12356789999999999999754
Q ss_pred C
Q 024125 245 A 245 (272)
Q Consensus 245 ~ 245 (272)
.
T Consensus 249 ~ 249 (272)
T 1yb1_A 249 Q 249 (272)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-40 Score=277.40 Aligned_cols=235 Identities=21% Similarity=0.224 Sum_probs=199.3
Q ss_pred cccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHH
Q 024125 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLG---AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREK 83 (272)
Q Consensus 7 ~~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 83 (272)
+......++++|++|||||++|||++++++|+++| ++|++++|+.+..+.+ +++...+.++.++.+|+++.+++++
T Consensus 11 ~~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~ 89 (267)
T 1sny_A 11 SSGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDK 89 (267)
T ss_dssp ---------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHH
T ss_pred cccccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHH
Confidence 33445567899999999999999999999999999 9999999998765543 3343335578899999999999999
Q ss_pred HHHHHHHHcCC-CccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------C-----CCeEE
Q 024125 84 LIQEVGSKFNG-KLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------G-----VGSIV 150 (272)
Q Consensus 84 ~~~~~~~~~~~-~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~-----~g~ii 150 (272)
+++++.+.++. ++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|+|.++ + .++||
T Consensus 90 ~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv 169 (267)
T 1sny_A 90 LVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAII 169 (267)
T ss_dssp HHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEE
T ss_pred HHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEE
Confidence 99999998832 7999999999876 6777888999999999999999999999999999865 3 58999
Q ss_pred EecCCCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCC
Q 024125 151 FISSVGGLSHV---GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRV 227 (272)
Q Consensus 151 ~vsS~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (272)
++||..+..+. ++...|++||++++.|+++++.++.++||+|++|+||+++|+|... ...
T Consensus 170 ~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~ 232 (267)
T 1sny_A 170 NMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------SAP 232 (267)
T ss_dssp EECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------TCS
T ss_pred EEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------CCC
Confidence 99999887664 3678899999999999999999999999999999999999998632 134
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
.+|+++++.++++++....+.+|+++.+||+.
T Consensus 233 ~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~ 264 (267)
T 1sny_A 233 LDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP 264 (267)
T ss_dssp BCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred CCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence 68999999999999877888999999999985
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=281.59 Aligned_cols=220 Identities=27% Similarity=0.390 Sum_probs=175.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||++|||++++++|+++|++|++++|+.++.+. . +.+|+++.++++++++++ . +++|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~---~~~Dl~~~~~v~~~~~~~---~-~~id 64 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D---LSTAEGRKQAIADVLAKC---S-KGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C---TTSHHHHHHHHHHHHTTC---T-TCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c---cccCCCCHHHHHHHHHHh---C-CCCC
Confidence 689999999999999999999999999999998754321 1 568999999998888743 2 5899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-------------------
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL------------------- 158 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~------------------- 158 (272)
+||||||..... +.|++.+++|+.+++.++++++|+|++++.++||++||..+.
T Consensus 65 ~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~ 137 (257)
T 1fjh_A 65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred EEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence 999999975311 128899999999999999999999998888999999999887
Q ss_pred ---------CCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHh--cCCCCCC
Q 024125 159 ---------SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIA--RTPLQRV 227 (272)
Q Consensus 159 ---------~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~ 227 (272)
.+.++...|++||++++.|+++++.|++++||+|++|+||+++|++........ ....... ..|.+++
T Consensus 138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~ 216 (257)
T 1fjh_A 138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP-RYGESIAKFVPPMGRR 216 (257)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSC
T ss_pred hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch-hHHHHHHhcccccCCC
Confidence 344467899999999999999999999999999999999999999976542211 1111222 4577788
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.+|+|+|+.+++++++...+++|+++.+|||+.+.
T Consensus 217 ~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~ 251 (257)
T 1fjh_A 217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251 (257)
T ss_dssp CCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred CCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence 99999999999999988889999999999998654
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-39 Score=275.93 Aligned_cols=221 Identities=26% Similarity=0.301 Sum_probs=189.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCH-HHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASP-DQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~-~~~~~~~~~~~~ 90 (272)
..+++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.+.+ .++.++.+|+++. ++++++++++.+
T Consensus 8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999888887654 5789999999998 999999999999
Q ss_pred HcCCCccEEEECCCCCCC------------------------------CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 024125 91 KFNGKLNILVNNVGTNIR------------------------------KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 140 (272)
++ +++|+||||||+... .++.+.+.+++++++++|+.|++.++++++|+
T Consensus 88 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 166 (311)
T 3o26_A 88 HF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL 166 (311)
T ss_dssp HH-SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred hC-CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence 98 699999999998632 24456688999999999999999999999999
Q ss_pred HHcCCCCeEEEecCCCCCCCC-------------------------------------------CCChhhHHHHHHHHHH
Q 024125 141 LKASGVGSIVFISSVGGLSHV-------------------------------------------GSGSIYGATKAAMNQL 177 (272)
Q Consensus 141 ~~~~~~g~ii~vsS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~ 177 (272)
|++++.++||++||..+..+. ++...|++||+|+++|
T Consensus 167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~ 246 (311)
T 3o26_A 167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY 246 (311)
T ss_dssp HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence 998888999999998876543 3557899999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+++++.++. +|+||+|+||+|+|+|..... ..+|++.++.+++++.......+|..+
T Consensus 247 ~~~la~e~~--~i~v~~v~PG~v~T~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~g~~~ 303 (311)
T 3o26_A 247 TRVLANKIP--KFQVNCVCPGLVKTEMNYGIG-----------------NYTAEEGAEHVVRIALFPDDGPSGFFY 303 (311)
T ss_dssp HHHHHHHCT--TSEEEEECCCSBCSGGGTTCC-----------------SBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred HHHHHhhcC--CceEEEecCCceecCCcCCCC-----------------CCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence 999999986 499999999999999965421 248999999999998755555555554
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-40 Score=275.77 Aligned_cols=217 Identities=24% Similarity=0.275 Sum_probs=156.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++++|++|||||++|||++++++|++ |+.|++++|+.+.+++..+ ...+..+.+|+++.++ .+.+.+..+.+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 73 (245)
T 3e9n_A 1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL 73 (245)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc
Confidence 467899999999999999999999987 9999999999888766543 2357888999988876 44444444556
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++||+
T Consensus 74 -~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~ 151 (245)
T 3e9n_A 74 -DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKH 151 (245)
T ss_dssp -SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHH
T ss_pred -CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHH
Confidence 6899999999998888888889999999999999999999999999998766 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
|++.|+++++.|++++||+|++|+||+++|++........ ....+.+++.+|+|+|++++++++..
T Consensus 152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~p~dvA~~i~~l~~~~ 217 (245)
T 3e9n_A 152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ------GTNFRPEIYIEPKEIANAIRFVIDAG 217 (245)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh------hcccccccCCCHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999976553321 12345567889999999999999754
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=285.84 Aligned_cols=235 Identities=20% Similarity=0.243 Sum_probs=186.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH---HHHHH---hCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC---LKEWQ---SKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~---~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++|++|||||++|||++++++|+++|++|++++|+.+.++.. .+.+. ..+.++.++.+|++|.++++++++++.
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 478999999999999999999999999988887754443332 22222 123578889999999999999998873
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+.+....|++
T Consensus 81 --~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a 157 (327)
T 1jtv_A 81 --E-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA 157 (327)
T ss_dssp --T-SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred --c-CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHH
Confidence 3 6899999999987777888899999999999999999999999999998877799999999999998889999999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH---------HHH---HHHHh--cCCCCCC-CCHHHHH
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK---------EFV---DKVIA--RTPLQRV-GEPEEVA 234 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~---------~~~---~~~~~--~~~~~~~-~~~~e~a 234 (272)
||+++++|+++++.|++++||+|++|+||+++|+|........ ... ..... ..+.++. .+|+|+|
T Consensus 158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA 237 (327)
T 1jtv_A 158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA 237 (327)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHH
Confidence 9999999999999999999999999999999999976532211 100 00100 0112223 4899999
Q ss_pred HHHHHHhcC---CCCCccccEE
Q 024125 235 SLVAYLCLP---AASYITGQII 253 (272)
Q Consensus 235 ~~~~~l~~~---~~~~~~G~~i 253 (272)
+.++++++. ...|++|+.+
T Consensus 238 ~~i~~l~~~~~~~~~~~tg~~~ 259 (327)
T 1jtv_A 238 EVFLTALRAPKPTLRYFTTERF 259 (327)
T ss_dssp HHHHHHHHCSSCCSEEESCSTT
T ss_pred HHHHHHHcCCCCCeEEEeCchH
Confidence 999999874 3567788754
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=288.12 Aligned_cols=243 Identities=14% Similarity=0.091 Sum_probs=202.6
Q ss_pred CCCCEEEEeCCCChHHHH--HHHHHHHCCCEEEEeeCChHH------------HHHHHHHHHhCCCeEEEEEecCCCHHH
Q 024125 15 LKGMTALVTGGTRGIGQA--TVEELAGLGAVVHTCSRNEVE------------LNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~--ia~~l~~~G~~v~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~ 80 (272)
..+|++|||||++|||++ +++.|+++|++|++++|+.+. .+.+.+.+...+.++..+.+|+++.++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 679999999999999999 999999999999999986543 244444555667788999999999999
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHH
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTN-------------IRKPT---------------------IEYSAEEYSKIMTTN 126 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~N 126 (272)
++++++++.+.+ +++|++|||||.. ...++ .+.+.++|++++++|
T Consensus 138 v~~~v~~i~~~~-G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn 216 (418)
T 4eue_A 138 KDKVIKYIKDEF-GKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM 216 (418)
T ss_dssp HHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence 999999999999 7999999999974 22333 356899999999999
Q ss_pred hHHHH-HHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC--hhhHHHHHHHHHHHHHHHHHHcc-CCeeEEEeeCCcccC
Q 024125 127 FESTY-HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKT 202 (272)
Q Consensus 127 ~~~~~-~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~PG~v~t 202 (272)
..+.+ .+++++++.+...+.|+||++||..+..+.+.. ..|++||+|+++|+++|+.||++ +|||||+|+||+++|
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T 296 (418)
T 4eue_A 217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT 296 (418)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence 99988 778887765444445899999999998888887 99999999999999999999999 999999999999999
Q ss_pred hhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 203 SLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++...+...+.+..... .++++.++||+++..+.+|+++ .+.+|+.+.+|+|..++
T Consensus 297 ~~s~~ip~~p~y~~~~~--~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r 352 (418)
T 4eue_A 297 KASAYIPTFPLYAAILY--KVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLR 352 (418)
T ss_dssp HHHHTSTTHHHHHHHHH--HHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEE
T ss_pred hhhhcCCCCcHHHHHHH--HHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceee
Confidence 99876643333322222 2466678999999999999976 56689999999987665
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=266.94 Aligned_cols=222 Identities=28% Similarity=0.361 Sum_probs=191.3
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.++|++|||||++|||++++++|++ +|++|++++|+.++.++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 80 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY- 80 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence 3589999999999999999999999 99999999999998888888887766778889999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC------------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYS-AEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------ 160 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~------------ 160 (272)
+++|+||||||...... .+.+ .+++++++++|+.++++++++++|+|++. ++||++||..+..+
T Consensus 81 g~id~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~~~~~~~ 157 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKF 157 (276)
T ss_dssp SSEEEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred CCCCEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC--CEEEEECChhhhcccccCChhHHhhc
Confidence 68999999999865443 2334 58999999999999999999999998653 79999999766421
Q ss_pred -----------------------------CCCChhhHHHHHHHHHHHHHHHHHHcc----CCeeEEEeeCCcccChhhHh
Q 024125 161 -----------------------------VGSGSIYGATKAAMNQLTRNLACEWAK----DNIRTNSVAPWYTKTSLVER 207 (272)
Q Consensus 161 -----------------------------~~~~~~Y~~sK~a~~~~~~~la~el~~----~~i~v~~v~PG~v~t~~~~~ 207 (272)
..+...|++||++++.|++.++.++.+ +||+|++|+||+++|++...
T Consensus 158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~ 237 (276)
T 1wma_A 158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 237 (276)
T ss_dssp HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence 012378999999999999999999988 79999999999999998542
Q ss_pred hhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC--CCCccccEEEeCCC
Q 024125 208 LLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA--ASYITGQIISVDGG 258 (272)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~--~~~~~G~~i~~dgG 258 (272)
..+.+|+|+|+.++++++.. ..+++|++|. +++
T Consensus 238 -----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~ 272 (276)
T 1wma_A 238 -----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR 272 (276)
T ss_dssp -----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred -----------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence 23579999999999999843 4689999998 554
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-37 Score=261.92 Aligned_cols=218 Identities=23% Similarity=0.254 Sum_probs=189.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.+.
T Consensus 24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 103 (286)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999888887776554 37888999999999999999999998
Q ss_pred cCCCccEEEEC-CCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNN-VGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++||| ||... .++.+.+.+++++++++|+.+++.++++++|.|++++ ++||++||..+..+.++...|++|
T Consensus 104 ~-g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~as 180 (286)
T 1xu9_A 104 M-GGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSAS 180 (286)
T ss_dssp H-TSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred c-CCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC-CEEEEECCcccccCCCCccHHHHH
Confidence 8 689999999 56543 3455678999999999999999999999999997654 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--ccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 171 KAAMNQLTRNLACEW--AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 171 K~a~~~~~~~la~el--~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
|++++.|+++++.|+ ...+|+|++++||+++|++........ ......+|+++|+.++..+..
T Consensus 181 K~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~~vA~~i~~~~~~ 245 (286)
T 1xu9_A 181 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----------VHMQAAPKEECALEIIKGGAL 245 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----------GGGGCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc----------ccCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999 678999999999999999975432110 112346899999999988754
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=308.03 Aligned_cols=243 Identities=19% Similarity=0.200 Sum_probs=202.4
Q ss_pred CCCCCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHh----CCCeEEEEEecCCCHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRG-IGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQS----KGFVVSGSVCDAASPDQREKL 84 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~g-iG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~ 84 (272)
+.++++||++|||||++| ||+++++.|+++|++|+++ +|+.+++++..+++.. .+.++.++.+|++|.++++++
T Consensus 669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al 748 (1887)
T 2uv8_A 669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL 748 (1887)
T ss_dssp TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence 456789999999999998 9999999999999999998 6777777766666532 256889999999999999999
Q ss_pred HHHHHHH-----cCC-CccEEEECCCCCCCC-CCCCCC--HHHHHHHHHHHhHHHHHHHHHH--HHHHHcCCCCeEEEec
Q 024125 85 IQEVGSK-----FNG-KLNILVNNVGTNIRK-PTIEYS--AEEYSKIMTTNFESTYHLCQLV--YPLLKASGVGSIVFIS 153 (272)
Q Consensus 85 ~~~~~~~-----~~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~~~~~~~~~g~ii~vs 153 (272)
++++.+. + + ++|+||||||+.... ++.+.+ .++|+++|++|+.+++.+++.+ +|.|.+++.|+||++|
T Consensus 749 v~~i~~~~~~~G~-G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnIS 827 (1887)
T 2uv8_A 749 IEFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS 827 (1887)
T ss_dssp HHHHHSCTTTTSC-CCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEC
T ss_pred HHHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEc
Confidence 9999987 5 5 899999999997776 788888 8999999999999999999988 7888777678999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHH-HHHHHHHHccCCeeEEEeeCCccc-ChhhHhhhhCHHHHHHHHhcCCCCCCCCHH
Q 024125 154 SVGGLSHVGSGSIYGATKAAMNQL-TRNLACEWAKDNIRTNSVAPWYTK-TSLVERLLENKEFVDKVIARTPLQRVGEPE 231 (272)
Q Consensus 154 S~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~el~~~~i~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (272)
|..+..+ +...|++||+|+++| ++.++.+++++ |+||+|+||+++ |+|...... ........+. +..+|+
T Consensus 828 S~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~----~~~~~~~~pl-r~~sPE 899 (1887)
T 2uv8_A 828 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNI----IAEGIEKMGV-RTFSQK 899 (1887)
T ss_dssp SCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCT----THHHHHTTSC-CCEEHH
T ss_pred ChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchh----HHHHHHhcCC-CCCCHH
Confidence 9988776 678999999999999 99999999888 999999999999 888653111 1112223444 556999
Q ss_pred HHHHHHHHHhcCC-CCCccccEEEe--CCCcCCC
Q 024125 232 EVASLVAYLCLPA-ASYITGQIISV--DGGFTAN 262 (272)
Q Consensus 232 e~a~~~~~l~~~~-~~~~~G~~i~~--dgG~~~~ 262 (272)
|+|+.++||+++. ..+++|+.|.+ |||+...
T Consensus 900 EVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~ 933 (1887)
T 2uv8_A 900 EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV 933 (1887)
T ss_dssp HHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred HHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence 9999999999987 68999999987 4997653
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=298.88 Aligned_cols=243 Identities=19% Similarity=0.209 Sum_probs=202.0
Q ss_pred CCCCCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHH----hCCCeEEEEEecCCCHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRG-IGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQ----SKGFVVSGSVCDAASPDQREKL 84 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~g-iG~~ia~~l~~~G~~v~~~~-r~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~ 84 (272)
+.++++||++|||||++| ||++++++|+++|++|++++ |+.+.+++..+++. ..+.++.++.+|++|.++++++
T Consensus 646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al 725 (1878)
T 2uv9_A 646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL 725 (1878)
T ss_dssp HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence 456789999999999999 99999999999999999985 66666665554442 2366899999999999999999
Q ss_pred HHHHHHH---cCC-CccEEEECCCCCCCC-CCCCCC--HHHHHHHHHHHhHHHHHHHHH--HHHHHHcCCCCeEEEecCC
Q 024125 85 IQEVGSK---FNG-KLNILVNNVGTNIRK-PTIEYS--AEEYSKIMTTNFESTYHLCQL--VYPLLKASGVGSIVFISSV 155 (272)
Q Consensus 85 ~~~~~~~---~~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~--~~~~~~~~~~g~ii~vsS~ 155 (272)
++++.+. + + ++|+||||||+.... ++.+.+ .++|++++++|+.+++.+++. ++|.|.+++.|+||++||.
T Consensus 726 v~~i~~~~~~~-G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ 804 (1878)
T 2uv9_A 726 VNYIYDTKNGL-GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPN 804 (1878)
T ss_dssp HHHHHCSSSSC-CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSC
T ss_pred HHHHHHhhccc-CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcch
Confidence 9999987 7 6 899999999987776 888888 899999999999999999977 7788877767899999999
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHH-HHccCCeeEEEeeCCccc-ChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHH
Q 024125 156 GGLSHVGSGSIYGATKAAMNQLTRNLAC-EWAKDNIRTNSVAPWYTK-TSLVERLLENKEFVDKVIARTPLQRVGEPEEV 233 (272)
Q Consensus 156 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~-el~~~~i~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 233 (272)
.+..+ +...|++||+++++|++.++. ++++. |+||+|+||+++ |+|.... +.........+. +..+|+|+
T Consensus 805 ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~----~~~~~~~~~~pl-r~~sPeEV 876 (1878)
T 2uv9_A 805 HGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN----NLVAEGVEKLGV-RTFSQQEM 876 (1878)
T ss_dssp SSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH----HHTHHHHHTTTC-CCBCHHHH
T ss_pred hhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc----hhhHHHHHhcCC-CCCCHHHH
Confidence 88776 467899999999999987665 47766 999999999999 9986431 111222233444 45599999
Q ss_pred HHHHHHHhcCCC-CCccccEEEe--CCCcCCC
Q 024125 234 ASLVAYLCLPAA-SYITGQIISV--DGGFTAN 262 (272)
Q Consensus 234 a~~~~~l~~~~~-~~~~G~~i~~--dgG~~~~ 262 (272)
++.++||+++.. .++||+.+.+ |||+...
T Consensus 877 A~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~ 908 (1878)
T 2uv9_A 877 AFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI 908 (1878)
T ss_dssp HHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred HHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence 999999999876 8999999876 5997654
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=240.79 Aligned_cols=200 Identities=21% Similarity=0.210 Sum_probs=177.1
Q ss_pred CC-EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 17 GM-TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 17 ~k-~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+| ++|||||+||||++++++|+ +|++|++++|+.+ .+.+|+++.++++++++++ ++
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~ 58 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV-----GK 58 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH-----CC
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh-----CC
Confidence 44 79999999999999999999 9999999999864 3679999999999988765 68
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|++. ++||++||..+..+.++...|+++|++++
T Consensus 59 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~ 136 (202)
T 3d7l_A 59 VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAVT 136 (202)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence 9999999998777788888999999999999999999999999988653 89999999999888889999999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEe
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISV 255 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~ 255 (272)
.+++.++.|+ ++||++++++||++.|++... ....+...+.+|+|+|+.+++++ ..+.+|+.+++
T Consensus 137 ~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~-----------~~~~~~~~~~~~~dva~~~~~~~---~~~~~G~~~~v 201 (202)
T 3d7l_A 137 AFAKSAAIEM-PRGIRINTVSPNVLEESWDKL-----------EPFFEGFLPVPAAKVARAFEKSV---FGAQTGESYQV 201 (202)
T ss_dssp HHHHHHTTSC-STTCEEEEEEECCBGGGHHHH-----------GGGSTTCCCBCHHHHHHHHHHHH---HSCCCSCEEEE
T ss_pred HHHHHHHHHc-cCCeEEEEEecCccCCchhhh-----------hhhccccCCCCHHHHHHHHHHhh---hccccCceEec
Confidence 9999999999 789999999999999998531 12245567789999999998887 35789999998
Q ss_pred C
Q 024125 256 D 256 (272)
Q Consensus 256 d 256 (272)
|
T Consensus 202 d 202 (202)
T 3d7l_A 202 Y 202 (202)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=303.44 Aligned_cols=245 Identities=19% Similarity=0.212 Sum_probs=204.1
Q ss_pred cCCCCCCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHh----CCCeEEEEEecCCCHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRG-IGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQS----KGFVVSGSVCDAASPDQRE 82 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~g-iG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~ 82 (272)
..+.+++++|++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.+ .+.++.++.+|++|.++++
T Consensus 468 a~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVe 547 (1688)
T 2pff_A 468 XXXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVE 547 (1688)
T ss_dssp SSSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHH
T ss_pred cccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHH
Confidence 34556789999999999998 9999999999999999988 6777666666666532 2568899999999999999
Q ss_pred HHHHHHHHH-----cCC-CccEEEECCCCCCCC-CCCCCC--HHHHHHHHHHHhHHHHHHHHHH--HHHHHcCCCCeEEE
Q 024125 83 KLIQEVGSK-----FNG-KLNILVNNVGTNIRK-PTIEYS--AEEYSKIMTTNFESTYHLCQLV--YPLLKASGVGSIVF 151 (272)
Q Consensus 83 ~~~~~~~~~-----~~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~~~~~~~~~g~ii~ 151 (272)
++++++.+. + + ++|+||||||+.... ++.+.+ .++|++++++|+.+++.+++.+ +|.|++++.|+||+
T Consensus 548 aLVe~I~e~~~~~Gf-G~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVn 626 (1688)
T 2pff_A 548 ALIEFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILP 626 (1688)
T ss_dssp HHHHHHHSCTTSSSC-CCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCC
T ss_pred HHHHHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEE
Confidence 999999987 6 5 899999999987776 788888 8999999999999999999998 88888777789999
Q ss_pred ecCCCCCCCCCCChhhHHHHHHHHHH-HHHHHHHHccCCeeEEEeeCCccc-ChhhHhhhhCHHHHHHHHhcCCCCCCCC
Q 024125 152 ISSVGGLSHVGSGSIYGATKAAMNQL-TRNLACEWAKDNIRTNSVAPWYTK-TSLVERLLENKEFVDKVIARTPLQRVGE 229 (272)
Q Consensus 152 vsS~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~el~~~~i~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (272)
+||..+..+ +...|++||+|+++| ++.++.++++. |+||+|+||+++ |+|.... +.........+. +..+
T Consensus 627 ISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~----e~~~~~l~~ipl-R~~s 698 (1688)
T 2pff_A 627 MSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN----NIIAEGIEKMGV-RTFS 698 (1688)
T ss_dssp CCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT----TTCSTTTSSSSC-CCCC
T ss_pred EEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc----hHHHHHHHhCCC-CCCC
Confidence 999988776 678999999999999 88888888877 999999999999 7875421 000111122333 4569
Q ss_pred HHHHHHHHHHHhcCC-CCCccccEEEeC--CCcCCC
Q 024125 230 PEEVASLVAYLCLPA-ASYITGQIISVD--GGFTAN 262 (272)
Q Consensus 230 ~~e~a~~~~~l~~~~-~~~~~G~~i~~d--gG~~~~ 262 (272)
|+|+|+.+++|+++. ..+++|+.+.+| ||+...
T Consensus 699 PEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~ 734 (1688)
T 2pff_A 699 QKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV 734 (1688)
T ss_dssp CCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred HHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence 999999999999987 689999999876 997653
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=250.03 Aligned_cols=221 Identities=26% Similarity=0.346 Sum_probs=183.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||+||||++++++|+++|++|++++|+.++.+. .+.+|+++.++++++++++ . +++|
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~-~~~d 64 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---G-GVLD 64 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---T-TCCS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---C-CCcc
Confidence 689999999999999999999999999999998654221 1568999999998888765 2 5899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC----------------
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---------------- 161 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~---------------- 161 (272)
+||||||.... .+.+++.+++|+.++++++++++|.|++.+.++||++||..+..+.
T Consensus 65 ~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
T 2dkn_A 65 GLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA 137 (255)
T ss_dssp EEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred EEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence 99999997431 1237899999999999999999999988877899999998877654
Q ss_pred ----------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcC--CCCCCCC
Q 024125 162 ----------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIART--PLQRVGE 229 (272)
Q Consensus 162 ----------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 229 (272)
++...|++||++++.+++.++.++.++||++++++||++.|++......... ........ +.+++.+
T Consensus 138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 216 (255)
T 2dkn_A 138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPR-YGESTRRFVAPLGRGSE 216 (255)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTT-THHHHHSCCCTTSSCBC
T ss_pred hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchh-hHHHHHHHHHHhcCCCC
Confidence 4667899999999999999999999999999999999999999766532211 11122222 6778899
Q ss_pred HHHHHHHHHHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 230 PEEVASLVAYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 230 ~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
|+|+|+++++++++...+++|+++++|||..+..
T Consensus 217 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~ 250 (255)
T 2dkn_A 217 PREVAEAIAFLLGPQASFIHGSVLFVDGGMDALM 250 (255)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHH
T ss_pred HHHHHHHHHHHhCCCcccceeeEEEecCCeEeee
Confidence 9999999999998777789999999999977653
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=233.39 Aligned_cols=200 Identities=22% Similarity=0.223 Sum_probs=172.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||+||||++++++|+++ +|++++|+.++.++..+++.. .++.+|++|.+++++++++ + +++|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~-~~id 68 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----A-GPLD 68 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----H-CSEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----c-CCCC
Confidence 68999999999999999999998 999999999888777766532 6778999999999999877 4 6899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
+||||||.....++.+.+.+++++.+++|+.+++++++++ ++++.++||++||..+..+.++...|+++|++++.+
T Consensus 69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 144 (207)
T 2yut_A 69 LLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY 144 (207)
T ss_dssp EEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence 9999999887778888899999999999999999999988 344558999999999888888899999999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
+++++.+++++||++++++||++.|++.... ..+..++.+|+|+|+.+++++....
T Consensus 145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~------------~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 145 LEAARKELLREGVHLVLVRLPAVATGLWAPL------------GGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp HHHHHHHHHTTTCEEEEECCCCBCSGGGGGG------------TSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHhhhCCEEEEEecCcccCCCcccc------------CCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999984321 1355778899999999999997543
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-33 Score=254.50 Aligned_cols=218 Identities=19% Similarity=0.158 Sum_probs=183.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEe-eCC-------------hHHHHHHHHHHHhCCCeEEEEEecCCCHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTC-SRN-------------EVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~-~r~-------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 80 (272)
.++++|||||++|||++++++|+++|++ |+++ +|+ .+..+++.+++...+.++.++.||++|.++
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 6899999999999999999999999996 7777 888 455677778887778899999999999999
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCC
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS 159 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~ 159 (272)
++++++++. ++ +++|+||||||+....++.+.+.+++++++++|+.|++++.+.+.+.|++++ .++||++||..+..
T Consensus 330 v~~~~~~i~-~~-g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~ 407 (525)
T 3qp9_A 330 AARLLAGVS-DA-HPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW 407 (525)
T ss_dssp HHHHHHTSC-TT-SCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred HHHHHHHHH-hc-CCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence 999999988 56 6899999999998888999999999999999999999999999999998776 68999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
+.++...|+++|+++++|+ .++...||++++|+||+++|+|.... ........ . .....+|+++++.+.+
T Consensus 408 g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~----~~~~~~~~-~-g~~~l~pee~a~~l~~ 477 (525)
T 3qp9_A 408 GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG----ATGERLRR-L-GLRPLAPATALTALDT 477 (525)
T ss_dssp CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS----HHHHHHHH-T-TBCCBCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch----hhHHHHHh-c-CCCCCCHHHHHHHHHH
Confidence 9999999999999999874 56778899999999999999997421 11111111 1 2245689999999999
Q ss_pred HhcCCC
Q 024125 240 LCLPAA 245 (272)
Q Consensus 240 l~~~~~ 245 (272)
+++...
T Consensus 478 ~l~~~~ 483 (525)
T 3qp9_A 478 ALGHGD 483 (525)
T ss_dssp HHHHTC
T ss_pred HHhCCC
Confidence 997543
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=277.09 Aligned_cols=238 Identities=20% Similarity=0.268 Sum_probs=182.4
Q ss_pred CCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRG-IGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 14 ~l~~k~vlItGa~~g-iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.++||++|||||++| ||+++|+.|+++|++|++++|+.+. ++++.+++...+.++..+.+|++|.+++++++++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 489999999999999 9999999999999999999998766 5666666666677899999999999999999999
Q ss_pred HHH----HcCCCccEEEECCCC----CCC-CCCCCCCHH----HHHHHHHHHhHHHHHHHHHHHHHHHcCCCC----eEE
Q 024125 88 VGS----KFNGKLNILVNNVGT----NIR-KPTIEYSAE----EYSKIMTTNFESTYHLCQLVYPLLKASGVG----SIV 150 (272)
Q Consensus 88 ~~~----~~~~~id~li~~ag~----~~~-~~~~~~~~~----~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g----~ii 150 (272)
+.+ .+ |++|++|||||+ ... ....+.+.+ .++..+++|+.+++.+++.+.|.|+.++.+ .|+
T Consensus 2213 i~~~~~~~f-G~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D 2213 VGTEQTESL-GPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp HTSCCEEEE-SSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHhhhhhhc-CCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence 988 78 799999999997 111 222222333 345559999999999999999999876542 333
Q ss_pred EecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHH--HccCCeeEEEeeCCccc-ChhhHhhhhCHHHHHHHHhcCCCCCC
Q 024125 151 FISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE--WAKDNIRTNSVAPWYTK-TSLVERLLENKEFVDKVIARTPLQRV 227 (272)
Q Consensus 151 ~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--l~~~~i~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (272)
+.|+..+. .++...|++||+|+++|+++++.| ++ .+|+||+++||+++ |++...... ........+.+ .
T Consensus 2292 ~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a-~~IrVn~v~PG~v~tT~l~~~~~~----~~~~~~~~~~r-~ 2363 (3089)
T 3zen_D 2292 PGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWA-ERVSLAHALIGWTKGTGLMGQNDA----IVSAVEEAGVT-T 2363 (3089)
T ss_dssp EECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTT-TTEEEEEEECCCEECSTTTTTTTT----THHHHGGGSCB-C
T ss_pred ECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccC-CCeEEEEEeecccCCCcccccchh----HHHHHHhcCCC-C
Confidence 44443332 234568999999999999999999 65 46999999999998 766543211 11122233333 3
Q ss_pred CCHHHHHHHHHHHhcCCCCCc-cccEEEeC--CCcC
Q 024125 228 GEPEEVASLVAYLCLPAASYI-TGQIISVD--GGFT 260 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~-~G~~i~~d--gG~~ 260 (272)
.+|+|+|..++||+|+...++ +|+.+.+| ||+.
T Consensus 2364 ~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~ 2399 (3089)
T 3zen_D 2364 YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLG 2399 (3089)
T ss_dssp EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCS
T ss_pred CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcC
Confidence 499999999999999876655 45655555 9874
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=233.88 Aligned_cols=213 Identities=22% Similarity=0.242 Sum_probs=174.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+|++|||||+||||++++++|+++|+ +|++++|+. +..+++.+++...+.++.++.||++|.++++++++++.+.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~- 317 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED- 317 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence 59999999999999999999999999 899999964 3466777888888889999999999999999999988665
Q ss_pred CCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|+||||||+. ...++.+.+.++|++++++|+.+++++.+.+. ....++||++||..+..+.++...|+++|
T Consensus 318 -g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~----~~~~~~iV~~SS~a~~~g~~g~~~YaAaK 392 (496)
T 3mje_A 318 -APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTA----DLDLDAFVLFSSGAAVWGSGGQPGYAAAN 392 (496)
T ss_dssp -SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred -CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhh----ccCCCEEEEEeChHhcCCCCCcHHHHHHH
Confidence 4799999999997 77888999999999999999999999888764 44568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
++++.|++. +...||++++|+||++.+..+.... ........ . .....+|++.+..+.+++...
T Consensus 393 a~ldala~~----~~~~Gi~v~sV~pG~w~~~gm~~~~---~~~~~l~~-~-g~~~l~pe~~~~~l~~~l~~~ 456 (496)
T 3mje_A 393 AYLDALAEH----RRSLGLTASSVAWGTWGEVGMATDP---EVHDRLVR-Q-GVLAMEPEHALGALDQMLEND 456 (496)
T ss_dssp HHHHHHHHH----HHHTTCCCEEEEECEESSSCC---------CHHHHH-T-TEEEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH----HHhcCCeEEEEECCcccCCccccCh---HHHHHHHh-c-CCCCCCHHHHHHHHHHHHcCC
Confidence 999988764 4456999999999988665443211 11111111 1 112348999999999888643
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=242.70 Aligned_cols=223 Identities=22% Similarity=0.251 Sum_probs=183.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEeeCC---hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELA-GLGA-VVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~-~~G~-~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.+|++|||||++|||++++++|+ ++|+ +|++++|+ .+..+++.++++..+.++.++.||++|.++++++++++.+
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 68999999999999999999999 7999 69999998 5557788888888889999999999999999999999876
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.+ ++|++|||||+....++.+.+.++|++.+++|+.|++++.+++.|.| +||++||.++..+.++...|+++
T Consensus 609 ~~--~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAa 680 (795)
T 3slk_A 609 EH--PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAA 680 (795)
T ss_dssp TS--CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHH
T ss_pred hC--CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHH
Confidence 64 79999999999888899999999999999999999999999987766 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+ |+++|+++++++||++++|+||++.|+++...... ..... ....... ..+++|....+.+++......+..
T Consensus 681 ka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~-~~~~~-~~~~g~~-~l~~~e~~~~~~~~l~~~~~~~~~ 753 (795)
T 3slk_A 681 NS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLRE-AEQDR-LARSGLL-PISTEEGLSQFDAACGGAHTVVAP 753 (795)
T ss_dssp HH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHH-HHHHH-HHHTTBC-CCCHHHHHHHHHHHHTSSCSSCCC
T ss_pred HH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccH-HHHHH-HHhcCCC-CCCHHHHHHHHHHHHhCCCcEEEE
Confidence 95 66677788888899999999999999865433211 11111 2222333 357788887777777644444443
Q ss_pred cEE
Q 024125 251 QII 253 (272)
Q Consensus 251 ~~i 253 (272)
..+
T Consensus 754 ~~~ 756 (795)
T 3slk_A 754 VRF 756 (795)
T ss_dssp CCB
T ss_pred Eec
Confidence 333
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=204.42 Aligned_cols=208 Identities=16% Similarity=0.172 Sum_probs=156.6
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeE-EEEEecCCCHHHHHHHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV-SGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~ 86 (272)
.++...++++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+. .+ .++.+|++ +
T Consensus 12 ~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~------~~~~~~~~Dl~--~------- 76 (236)
T 3e8x_A 12 SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER------GASDIVVANLE--E------- 76 (236)
T ss_dssp ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT------TCSEEEECCTT--S-------
T ss_pred ccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC------CCceEEEcccH--H-------
Confidence 34455678999999999999999999999999999999999998887655431 46 77899998 2
Q ss_pred HHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC---CC
Q 024125 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---GS 163 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~---~~ 163 (272)
.+.+.+ +++|+||||||.... +++++.+++|+.++.++++++ ++.+.++||++||..+..+. .+
T Consensus 77 ~~~~~~-~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~~~ 143 (236)
T 3e8x_A 77 DFSHAF-ASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTVDPDQGPMN 143 (236)
T ss_dssp CCGGGG-TTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCSCGGGSCGG
T ss_pred HHHHHH-cCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCCCCCCChhh
Confidence 233334 579999999997432 357889999999999999988 33456899999998776654 46
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
...|+.+|++++.+++ ..+++++.++||++.++.......... .......+.+++|+|+++.+++..
T Consensus 144 ~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~------~~~~~~~~i~~~Dva~~~~~~~~~ 210 (236)
T 3e8x_A 144 MRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP------HFSEITRSITRHDVAKVIAELVDQ 210 (236)
T ss_dssp GHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES------SCSCCCCCEEHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc------CCCcccCcEeHHHHHHHHHHHhcC
Confidence 7899999999999876 468999999999999986432211000 111235667899999999999965
Q ss_pred CCCCccccEEEeCCC
Q 024125 244 AASYITGQIISVDGG 258 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG 258 (272)
.. ..|+.+++++|
T Consensus 211 ~~--~~g~~~~v~~~ 223 (236)
T 3e8x_A 211 QH--TIGKTFEVLNG 223 (236)
T ss_dssp GG--GTTEEEEEEEC
T ss_pred cc--ccCCeEEEeCC
Confidence 43 77999999887
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=218.06 Aligned_cols=212 Identities=19% Similarity=0.161 Sum_probs=172.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChH---HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV---ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++|||||+||||++++++|+++|+ +|++++|+.+ ..+++.+++...+.++.++.+|++|.++++++++++ +.
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~ 303 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD 303 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence 589999999999999999999999999 5999999875 456677777777888999999999999999999988 45
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|+||||||+.....+.+.+.+++++++++|+.|++++.+.+ .+.+.++||++||..+..+.++...|+++|
T Consensus 304 ~-g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~----~~~~~~~~V~~SS~a~~~g~~g~~~Yaaak 378 (486)
T 2fr1_A 304 D-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGN 378 (486)
T ss_dssp T-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred c-CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHh----CcCCCCEEEEEcChHhcCCCCCCHHHHHHH
Confidence 5 68999999999988788888999999999999999999998876 344668999999999888888999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccCh-hhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS-LVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
++++.|++. +...|+++++|+||++.++ |.... ..... . .......+|+++++.+..++...
T Consensus 379 a~l~~la~~----~~~~gi~v~~i~pG~~~~~gm~~~~-----~~~~~-~-~~g~~~i~~e~~a~~l~~~l~~~ 441 (486)
T 2fr1_A 379 AYLDGLAQQ----RRSDGLPATAVAWGTWAGSGMAEGP-----VADRF-R-RHGVIEMPPETACRALQNALDRA 441 (486)
T ss_dssp HHHHHHHHH----HHHTTCCCEEEEECCBC-----------------C-T-TTTEECBCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH----HHhcCCeEEEEECCeeCCCcccchh-----HHHHH-H-hcCCCCCCHHHHHHHHHHHHhCC
Confidence 999988654 4456999999999999886 43211 01100 0 11123568999999999998643
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-27 Score=214.71 Aligned_cols=208 Identities=22% Similarity=0.211 Sum_probs=172.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChH---HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV---ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++|||||+||||++++++|+++|+ +|++++|+.+ ..+++.+++...+.++.++.||++|.+++++++++
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---- 333 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---- 333 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence 579999999999999999999999999 6999999864 45667777777788899999999999999988876
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|+||||||+.....+.+.+.+++++++++|+.+++++.+.+.+. .+.++||++||..+..+.++...|+++|
T Consensus 334 --~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~YaaaK 408 (511)
T 2z5l_A 334 --YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAAN 408 (511)
T ss_dssp --SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHHH
T ss_pred --CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHHH
Confidence 47999999999988888888999999999999999999998876321 1558999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcc-cChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYT-KTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
++++.|++.+ ...|+++++|+||++ +|+|...... .... . ......+|+++++.+..++..
T Consensus 409 a~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~~--~~~~---~--~g~~~l~~e~~a~~l~~al~~ 470 (511)
T 2z5l_A 409 AALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAGE--ESLS---R--RGLRAMDPDAAVDALLGAMGR 470 (511)
T ss_dssp HHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHHH--HHHH---H--HTBCCBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----HHcCCcEEEEECCcccCCcccccccH--HHHH---h--cCCCCCCHHHHHHHHHHHHhC
Confidence 9999988754 456999999999998 7887643211 1111 1 112356899999999988863
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-27 Score=199.23 Aligned_cols=202 Identities=17% Similarity=0.206 Sum_probs=157.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++|+||||||+||||++++++|+++|++|++++|+..+.+ ..++.++.+|++|.+++++++ .+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~--------~~ 64 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMV--------AG 64 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHH--------TT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHH--------cC
Confidence 4689999999999999999999999999999999875432 356888999999999998887 36
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC------------CCCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL------------SHVGS 163 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~------------~~~~~ 163 (272)
+|+||||||.. +.+.|++.+++|+.+++++++++ ++++.++||++||..+. .+..+
T Consensus 65 ~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~ 132 (267)
T 3rft_A 65 CDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIGYYPQTERLGPDVPARP 132 (267)
T ss_dssp CSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCC
T ss_pred CCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCC
Confidence 99999999973 22357889999999999999998 44566899999998766 33455
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
...|++||++.+.+++.++.++ +++++.++||.+.+++... .... .+.+++++++.+..++..
T Consensus 133 ~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~----~~~~----------~~~~~~d~a~~~~~~~~~ 195 (267)
T 3rft_A 133 DGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNY----RMLS----------TWFSHDDFVSLIEAVFRA 195 (267)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCST----THHH----------HBCCHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCC----Ccee----------eEEcHHHHHHHHHHHHhC
Confidence 6889999999999999999887 7888888888887764321 0111 135789999999888854
Q ss_pred CCCCccccEEEeCCCcCCCCCC
Q 024125 244 AASYITGQIISVDGGFTANGFN 265 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~~~~~ 265 (272)
. ...+..+.+.++....+++
T Consensus 196 ~--~~~~~~~~~~s~~~~~~~~ 215 (267)
T 3rft_A 196 P--VLGCPVVWGASANDAGWWD 215 (267)
T ss_dssp S--CCCSCEEEECCCCTTCCBC
T ss_pred C--CCCceEEEEeCCCCCCccc
Confidence 3 2334556665554444443
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=199.60 Aligned_cols=219 Identities=16% Similarity=0.100 Sum_probs=170.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHC-CC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGL-GA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~-G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
..+++|+||||||+|+||++++++|+++ |+ +|++++|++++...+.+++. ..++.++.+|++|.+++.+++
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~----- 89 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYAL----- 89 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHT-----
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHH-----
Confidence 3478999999999999999999999999 98 99999999888777766654 246788899999999887776
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
.++|+||||||..... ......++.+++|+.++.++++++.+ .+.++||++||..+.. +...|++|
T Consensus 90 ---~~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~l~~aa~~----~~v~~~V~~SS~~~~~---p~~~Y~~s 155 (344)
T 2gn4_A 90 ---EGVDICIHAAALKHVP----IAEYNPLECIKTNIMGASNVINACLK----NAISQVIALSTDKAAN---PINLYGAT 155 (344)
T ss_dssp ---TTCSEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSS---CCSHHHHH
T ss_pred ---hcCCEEEECCCCCCCC----chhcCHHHHHHHHHHHHHHHHHHHHh----CCCCEEEEecCCccCC---CccHHHHH
Confidence 3699999999964211 12234568999999999999999865 3567999999976654 35789999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcC-C--------CCCCCCHHHHHHHHHHHh
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIART-P--------LQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~e~a~~~~~l~ 241 (272)
|++.+.+++.++.++.+.++++++++||.+.++...-+ +.+........ + ...+.+++|++++++.++
T Consensus 156 K~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i---~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l 232 (344)
T 2gn4_A 156 KLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVV---PFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSL 232 (344)
T ss_dssp HHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHH---HHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHH---HHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHH
Confidence 99999999999998888899999999999988653211 12222222221 1 123568999999999988
Q ss_pred cCCCCCccccEEEeCCC
Q 024125 242 LPAASYITGQIISVDGG 258 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG 258 (272)
... ..|+.++++++
T Consensus 233 ~~~---~~g~~~~~~~~ 246 (344)
T 2gn4_A 233 KRM---HGGEIFVPKIP 246 (344)
T ss_dssp HHC---CSSCEEEECCC
T ss_pred hhc---cCCCEEecCCC
Confidence 642 35888888776
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-26 Score=197.58 Aligned_cols=224 Identities=18% Similarity=0.163 Sum_probs=167.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEE-EecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGS-VCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~-~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++|+||||||+|+||++++++|+++|++|++++|+.+..+.+.+.+... +.++.++ .+|++|.+++++++
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------ 81 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI------ 81 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT------
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH------
Confidence 467899999999999999999999999999999999988776665554332 3467777 79999988776665
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-CC---------
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HV--------- 161 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-~~--------- 161 (272)
.++|+|||||+..... +++++.+++|+.++.++++++.+ ..+.++||++||...+. +.
T Consensus 82 --~~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~~~ 149 (342)
T 1y1p_A 82 --KGAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYLD 149 (342)
T ss_dssp --TTCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred --cCCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCcccC
Confidence 3699999999974322 23567999999999999998854 23457999999986642 11
Q ss_pred ---------------------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CHHHHHH
Q 024125 162 ---------------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NKEFVDK 217 (272)
Q Consensus 162 ---------------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~ 217 (272)
.+...|+.||++.+.+++.++.+++. ++++++++||.+.++....... ...+...
T Consensus 150 E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~ 228 (342)
T 1y1p_A 150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMS 228 (342)
T ss_dssp TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHH
T ss_pred ccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHHH
Confidence 12367999999999999999999866 8999999999998876432110 0122222
Q ss_pred HHhcC--------CCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 218 VIART--------PLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 218 ~~~~~--------~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
..... +...+..++|+|++++.++.. ...+|+.+..+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~ 275 (342)
T 1y1p_A 229 LFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG 275 (342)
T ss_dssp HHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred HHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCC
Confidence 22211 234567899999999988854 3456776666654
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.4e-26 Score=196.89 Aligned_cols=224 Identities=17% Similarity=0.096 Sum_probs=165.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
|+||||||+|+||++++++|+++|++|++++|+. .......+.+... .++.++.+|++|.++++++++.. ++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~------~~ 74 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNKNDVTRLITKY------MP 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHH------CC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-CceEEEEcCCCCHHHHHHHHhcc------CC
Confidence 5899999999999999999999999999998753 2222333344332 35778899999999998888652 59
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------------
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----------------- 159 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~----------------- 159 (272)
|+|||||+.... +.+.++++..+++|+.++.++++++.+.+. .++||++||...+.
T Consensus 75 d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~ 147 (347)
T 1orr_A 75 DSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV 147 (347)
T ss_dssp SEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred CEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence 999999996321 123456788999999999999999977542 26999999976432
Q ss_pred ----------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CHHHHHHHHhcC----
Q 024125 160 ----------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NKEFVDKVIART---- 222 (272)
Q Consensus 160 ----------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~---- 222 (272)
+..+...|+.+|++.+.+++.++.++ +++++.++||.+.++....... ...+........
T Consensus 148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (347)
T 1orr_A 148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN 224 (347)
T ss_dssp TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCC
Confidence 23356789999999999999999886 7999999999999886421100 011222221111
Q ss_pred -CCC---------CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 223 -PLQ---------RVGEPEEVASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 223 -~~~---------~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
+.. .+..++|+|+++++++.. ....+|+.+++++|.
T Consensus 225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~ 270 (347)
T 1orr_A 225 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI 270 (347)
T ss_dssp CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred CCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence 221 255899999999998853 245679999999985
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-26 Score=198.74 Aligned_cols=220 Identities=13% Similarity=0.084 Sum_probs=161.3
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
++.+.++++|+||||||+|+||++++++|+++|++|++++|+.+...+..+++ .++.++.+|++|.++++++++++
T Consensus 12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~ 87 (330)
T 2pzm_A 12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF 87 (330)
T ss_dssp --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc
Confidence 44567789999999999999999999999999999999999654322111111 35778899999999998888654
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC-----C-
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-----G- 162 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-----~- 162 (272)
++|+||||||..... +.++++ +++|+.++.++++++.. .+.++||++||...+... +
T Consensus 88 ------~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~ 150 (330)
T 2pzm_A 88 ------KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPI 150 (330)
T ss_dssp ------CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCT
T ss_pred ------CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCc
Confidence 699999999975332 334555 99999999999998853 345799999998765433 2
Q ss_pred -----CChhhHHHHHHHHHHHHHHHHHHccCCee-EEEeeCCcccChhhHhhhhCHHHHHHHHhcCC------CCCCCCH
Q 024125 163 -----SGSIYGATKAAMNQLTRNLACEWAKDNIR-TNSVAPWYTKTSLVERLLENKEFVDKVIARTP------LQRVGEP 230 (272)
Q Consensus 163 -----~~~~Y~~sK~a~~~~~~~la~el~~~~i~-v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 230 (272)
+...|+.+|++++.+++.+ ++....+| ++.+.||. .+++...+. .......+ ...+..+
T Consensus 151 ~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~ 221 (330)
T 2pzm_A 151 DSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFY------KRLKAGQKCFCSDTVRDFLDM 221 (330)
T ss_dssp TCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHH------HHHHTTCCCCEESCEECEEEH
T ss_pred CCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHH------HHHHcCCEEeCCCCEecceeH
Confidence 5678999999999999887 44444566 67777775 455543221 11111101 2456789
Q ss_pred HHHHH-HHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 231 EEVAS-LVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 231 ~e~a~-~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+|+|+ ++++++.... |+.+++++|..+.
T Consensus 222 ~Dva~~a~~~~~~~~~----g~~~~v~~~~~~s 250 (330)
T 2pzm_A 222 SDFLAIADLSLQEGRP----TGVFNVSTGEGHS 250 (330)
T ss_dssp HHHHHHHHHHTSTTCC----CEEEEESCSCCEE
T ss_pred HHHHHHHHHHHhhcCC----CCEEEeCCCCCCC
Confidence 99999 9999986522 9999999987654
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.6e-27 Score=194.09 Aligned_cols=198 Identities=15% Similarity=0.140 Sum_probs=150.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++++|++|||||+|+||++++++|+++|+ +|++++|+.+..++.. ...+.++.+|++|.+++++++
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~------ 82 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAF------ 82 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGG------
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHh------
Confidence 36789999999999999999999999999 9999999875433211 124677899999998877665
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
.++|+||||||... ..+.+++.+++|+.++.++++++ ++.+.++||++||..+..+ +...|+++|
T Consensus 83 --~~~d~vi~~ag~~~-------~~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~~--~~~~Y~~sK 147 (242)
T 2bka_A 83 --QGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQVK 147 (242)
T ss_dssp --SSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHH
T ss_pred --cCCCEEEECCCccc-------ccCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCCC--CcchHHHHH
Confidence 46999999999632 12457889999999998888765 4556689999999887653 456899999
Q ss_pred HHHHHHHHHHHHHHccCCe-eEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC----CCCCCCHHHHHHHHHHHhcCCCC
Q 024125 172 AAMNQLTRNLACEWAKDNI-RTNSVAPWYTKTSLVERLLENKEFVDKVIARTP----LQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
++++.+++.+ ++ ++++++||++.|++...... ...........| .+++.+++|+|+++++++++...
T Consensus 148 ~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~ 219 (242)
T 2bka_A 148 GEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPG-EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD 219 (242)
T ss_dssp HHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHH-HHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHH-HHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence 9999988653 45 79999999999987532111 112222222334 45678999999999999976544
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-26 Score=199.02 Aligned_cols=231 Identities=16% Similarity=0.133 Sum_probs=167.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.+|+||||||+|+||++++++|+++|++|++++|+.+...+..+++... +..+.++.+|++|.+++++++++ .
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~ 77 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA------H 77 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH------S
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc------c
Confidence 4689999999999999999999999999999999876655555554432 45678889999999999988865 3
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CCCC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGS 163 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~~~ 163 (272)
++|+||||||...... ..+..++.+++|+.++.++++++ ++.+.++||++||...+. +..+
T Consensus 78 ~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~ 149 (341)
T 3enk_A 78 PITAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSA 149 (341)
T ss_dssp CCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBC
T ss_pred CCcEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCC
Confidence 7999999999743221 23445678999999998877765 566668999999966542 2233
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--------C-HHHHHHHHhc--CC---------
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--------N-KEFVDKVIAR--TP--------- 223 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--------~-~~~~~~~~~~--~~--------- 223 (272)
...|+.+|++.+.+++.++.++. +++++.++|+.+..+....... . -......... .+
T Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 227 (341)
T 3enk_A 150 TNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYP 227 (341)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred CChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccC
Confidence 47899999999999999998863 5899999998887653211000 0 0111211111 11
Q ss_pred ------CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 224 ------LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 224 ------~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
...+..++|+++++++++........|+.+++.+|..++
T Consensus 228 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s 272 (341)
T 3enk_A 228 TPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYS 272 (341)
T ss_dssp STTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEE
T ss_pred CCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCcee
Confidence 113456899999999888542234569999999987654
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-26 Score=197.02 Aligned_cols=218 Identities=18% Similarity=0.154 Sum_probs=164.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
..++||||||+|+||++++++|+++|++|++++|+.+. +. + ++.++.+|++|.++++++++. ++
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~------~~ 74 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD------IK 74 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH------HC
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh------cC
Confidence 45899999999999999999999999999999998654 21 1 577889999999999888865 26
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-------------CC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-------------VG 162 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-------------~~ 162 (272)
+|+||||||..... .+.+++++.+++|+.++.++++++ +.+ .+.++||++||...+.. ..
T Consensus 75 ~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~ 147 (321)
T 2pk3_A 75 PDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLR 147 (321)
T ss_dssp CSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB
T ss_pred CCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCC
Confidence 99999999964321 122357889999999999999998 544 24579999999865432 24
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHh---c-----------CCCCCCC
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIA---R-----------TPLQRVG 228 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~ 228 (272)
+...|+.+|++.+.+++.++.++ |++++.++||.+.++........+.+...... . .+...+.
T Consensus 148 ~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v 224 (321)
T 2pk3_A 148 PMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFT 224 (321)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEE
T ss_pred CCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeE
Confidence 56789999999999999999875 89999999999988764321000122222222 1 1122356
Q ss_pred CHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 229 EPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 229 ~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.++|+|+++++++... .+|+.+++++|..+.
T Consensus 225 ~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~s 255 (321)
T 2pk3_A 225 DVRDIVQAYWLLSQYG---KTGDVYNVCSGIGTR 255 (321)
T ss_dssp EHHHHHHHHHHHHHHC---CTTCEEEESCSCEEE
T ss_pred EHHHHHHHHHHHHhCC---CCCCeEEeCCCCCee
Confidence 8999999999998643 468999999986554
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-25 Score=180.11 Aligned_cols=192 Identities=9% Similarity=0.000 Sum_probs=147.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEeeCChH-HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 17 GMTALVTGGTRGIGQATVEELA-GLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~-~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||||+|+||++++++|+ ++|++|++++|+.+ +++++. .....+.++.+|++|.+++++++ .
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~--------~ 72 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAV--------T 72 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHH--------T
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHH--------c
Confidence 3789999999999999999999 89999999999987 655443 23457888999999999988877 3
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh---------
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS--------- 165 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~--------- 165 (272)
.+|+||||||.. |+. ++.+++.|++.+.++||++||..+..+.+...
T Consensus 73 ~~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~ 128 (221)
T 3r6d_A 73 NAEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLP 128 (221)
T ss_dssp TCSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSC
T ss_pred CCCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccc
Confidence 689999999852 222 78888888888888999999998877655444
Q ss_pred -hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChh-hHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--
Q 024125 166 -IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL-VERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC-- 241 (272)
Q Consensus 166 -~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~-- 241 (272)
.|+.+|.+++.+++. .+++++.|+||++.++. ...+.... ......+.+.+++|+|+.+++++
T Consensus 129 ~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~------~~~~~~~~~~~~~dvA~~~~~l~~~ 195 (221)
T 3r6d_A 129 ISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIP------EGAQFNDAQVSREAVVKAIFDILHA 195 (221)
T ss_dssp HHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEEC------TTSCCCCCEEEHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeecc------CCccCCCceeeHHHHHHHHHHHHHh
Confidence 899999999987753 58999999999998873 22111000 00112234678999999999999
Q ss_pred cCCCCCccccEEEeCCC
Q 024125 242 LPAASYITGQIISVDGG 258 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG 258 (272)
++...++ ++.+.+.+.
T Consensus 196 ~~~~~~~-~~~~~i~~~ 211 (221)
T 3r6d_A 196 ADETPFH-RTSIGVGEP 211 (221)
T ss_dssp SCCGGGT-TEEEEEECT
T ss_pred cChhhhh-cceeeecCC
Confidence 8766655 555555543
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-25 Score=193.89 Aligned_cols=230 Identities=12% Similarity=0.028 Sum_probs=170.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH----HHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV----ELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
+++++++||||||+|+||++++++|+++|++|++++|+.. .++.+.+++... ..++.++.+|++|.+++++++
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-- 100 (352)
T 1sb8_A 23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-- 100 (352)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--
T ss_pred cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh--
Confidence 3467899999999999999999999999999999998653 333333222110 236778899999999887777
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC-----
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG----- 162 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~----- 162 (272)
.++|+|||||+..... .+.++++..+++|+.++.++++++.+ .+.++||++||...+...+
T Consensus 101 ------~~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~ 166 (352)
T 1sb8_A 101 ------AGVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKV 166 (352)
T ss_dssp ------TTCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred ------cCCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCCC
Confidence 3699999999963211 13456788999999999999998854 4557999999987654332
Q ss_pred ------CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhh--hh--CHHHHHHHHhcCCC--------
Q 024125 163 ------SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERL--LE--NKEFVDKVIARTPL-------- 224 (272)
Q Consensus 163 ------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~--~~--~~~~~~~~~~~~~~-------- 224 (272)
+...|+.+|++.+.+++.++.++ +++++.++||.+.++..... .. .+.+........+.
T Consensus 167 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~ 243 (352)
T 1sb8_A 167 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGET 243 (352)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCc
Confidence 45789999999999999999886 79999999999988764211 00 01233333333322
Q ss_pred -CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 225 -QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 225 -~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..+..++|++++++.++... ....|+.+++.+|..+.
T Consensus 244 ~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s 281 (352)
T 1sb8_A 244 SRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRTS 281 (352)
T ss_dssp EECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE
T ss_pred eEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCcc
Confidence 14567999999998888542 34579999999886544
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-25 Score=192.53 Aligned_cols=226 Identities=15% Similarity=0.034 Sum_probs=163.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH-HHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK-CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++|+||||||+|+||++++++|+++|++|++++|+.+.... ..+.+. ...++.++.+|++|.+++.++++.+
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------ 74 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV------ 74 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH------
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc------
Confidence 57999999999999999999999999999999998654321 111111 1235778899999999998888754
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-----------CCCCC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-----------SHVGS 163 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-----------~~~~~ 163 (272)
++|+||||||.... +.+.+++++.+++|+.++.++++++.+ + ...++||++||...+ .+..+
T Consensus 75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~ 147 (345)
T 2z1m_A 75 QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRT-V--KPDTKFYQASTSEMFGKVQEIPQTEKTPFYP 147 (345)
T ss_dssp CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHH-H--CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHH-h--CCCceEEEEechhhcCCCCCCCCCccCCCCC
Confidence 58999999996421 112345788999999999999999874 2 113799999997542 23455
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHc---cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcC---------CC-CCCCCH
Q 024125 164 GSIYGATKAAMNQLTRNLACEWA---KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIART---------PL-QRVGEP 230 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~---~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~ 230 (272)
...|+.+|++.+.+++.++.+++ ...+.++.+.||...|.+...+. .......... +. ..+..+
T Consensus 148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v 224 (345)
T 2z1m_A 148 RSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT---YSLARIKYGLQDKLVLGNLNAKRDWGYA 224 (345)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH---HHHHHHHTTSCSCEEESCTTCEECCEEH
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH---HHHHHHHcCCCCeeeeCCCCceeeeEEH
Confidence 67899999999999999999885 33456788889988887643321 1121111111 11 236789
Q ss_pred HHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 231 EEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 231 ~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+|+++++++++.... ++.+++.+|..++
T Consensus 225 ~Dva~a~~~~~~~~~----~~~~~i~~~~~~s 252 (345)
T 2z1m_A 225 PEYVEAMWLMMQQPE----PDDYVIATGETHT 252 (345)
T ss_dssp HHHHHHHHHHHTSSS----CCCEEECCSCCEE
T ss_pred HHHHHHHHHHHhCCC----CceEEEeCCCCcc
Confidence 999999999996432 3677887775443
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=196.26 Aligned_cols=226 Identities=15% Similarity=0.111 Sum_probs=166.5
Q ss_pred EEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChH--HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 19 TALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+||||||+|+||++++++|+++ |++|++++|+.. ..+.+ +++.. ..++.++.+|++|.+++.+++++ .+
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~------~~ 73 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE-SNRYNFEHADICDSAEITRIFEQ------YQ 73 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT-CTTEEEEECCTTCHHHHHHHHHH------HC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc-CCCeEEEECCCCCHHHHHHHHhh------cC
Confidence 6999999999999999999998 799999998641 11111 11111 34678889999999999888865 26
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-----CCeEEEecCCCCCC-----------
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-----VGSIVFISSVGGLS----------- 159 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~g~ii~vsS~~~~~----------- 159 (272)
+|+||||||.... +.+.+++++.+++|+.++.++++++.+.|...+ .++||++||...+.
T Consensus 74 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 149 (361)
T 1kew_A 74 PDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp CSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred CCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence 9999999996421 123456788999999999999999999875422 25999999965321
Q ss_pred ----------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC------
Q 024125 160 ----------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTP------ 223 (272)
Q Consensus 160 ----------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------ 223 (272)
+..+...|+.+|++.+.+++.++.++ +++++.++||.+.++........+.+........+
T Consensus 150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (361)
T 1kew_A 150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK 226 (361)
T ss_dssp SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT
T ss_pred ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCC
Confidence 23456789999999999999999887 79999999999998874210000122333332222
Q ss_pred ---CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 224 ---LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 224 ---~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
...+..++|+|+++++++... .+|+.+++++|..+.
T Consensus 227 ~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s 265 (361)
T 1kew_A 227 GDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKK 265 (361)
T ss_dssp SCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred CceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCeee
Confidence 124567999999999998642 479999999987543
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=194.35 Aligned_cols=223 Identities=16% Similarity=0.073 Sum_probs=163.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChH--HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++||||||+|+||++++++|+++| ++|++++|+.. ..+.+ +++. ...++.++.+|++|.+++++++
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~------- 73 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELV------- 73 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHH-------
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHh-------
Confidence 5789999999999999999999997 89999988641 11111 1111 1346788899999999888877
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HV 161 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~ 161 (272)
.++|+||||||.... +.+.+++++.+++|+.++.++++++.+. ...++||++||...+. +.
T Consensus 74 -~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~ 145 (336)
T 2hun_A 74 -RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDRL 145 (336)
T ss_dssp -HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBCC
T ss_pred -hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCCC
Confidence 369999999996421 1234567889999999999999999775 2237999999975332 34
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC---------CCCCCCHHH
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTP---------LQRVGEPEE 232 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~e 232 (272)
.+...|+.+|++.+.+++.++.++ +++++.++||.+.++......-.+.+........+ ...+..++|
T Consensus 146 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 222 (336)
T 2hun_A 146 MPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVED 222 (336)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHH
Confidence 456789999999999999999875 79999999999988774210000122333332221 124567999
Q ss_pred HHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 233 VASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 233 ~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+++++++++... .+|+.+++++|..+.
T Consensus 223 va~~~~~~~~~~---~~g~~~~v~~~~~~s 249 (336)
T 2hun_A 223 HVRAIELVLLKG---ESREIYNISAGEEKT 249 (336)
T ss_dssp HHHHHHHHHHHC---CTTCEEEECCSCEEC
T ss_pred HHHHHHHHHhCC---CCCCEEEeCCCCccc
Confidence 999999998532 379999999986543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=184.74 Aligned_cols=193 Identities=15% Similarity=0.210 Sum_probs=154.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC-HHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~i 96 (272)
++||||||+|+||++++++|+++|++|++++|+.++.+.. ..+.++.+|++| .+++.+++ ..+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~--------~~~ 64 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQL--------HGM 64 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTT--------TTC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHH--------cCC
Confidence 3799999999999999999999999999999998654322 468889999999 88887766 469
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC-------ChhhHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-------GSIYGA 169 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~-------~~~Y~~ 169 (272)
|+||||||.... ..+++|+.++.++++++ ++.+.++||++||..+..+.+. ...|+.
T Consensus 65 d~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~ 128 (219)
T 3dqp_A 65 DAIINVSGSGGK------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYI 128 (219)
T ss_dssp SEEEECCCCTTS------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHH
T ss_pred CEEEECCcCCCC------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcccccccccccHHHH
Confidence 999999997432 26778999998888876 5556679999999988776665 789999
Q ss_pred HHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 170 sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
+|.+.+.+++ ...+++++.++||++.++....... .......+.+++|+|+.+++++... ...
T Consensus 129 sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~---------~~~~~~~~i~~~Dva~~i~~~l~~~--~~~ 191 (219)
T 3dqp_A 129 AKHFADLYLT------KETNLDYTIIQPGALTEEEATGLID---------INDEVSASNTIGDVADTIKELVMTD--HSI 191 (219)
T ss_dssp HHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEE---------ESSSCCCCEEHHHHHHHHHHHHTCG--GGT
T ss_pred HHHHHHHHHH------hccCCcEEEEeCceEecCCCCCccc---------cCCCcCCcccHHHHHHHHHHHHhCc--ccc
Confidence 9999999886 3679999999999998875432211 1134556778999999999999753 345
Q ss_pred ccEEEeCCCc
Q 024125 250 GQIISVDGGF 259 (272)
Q Consensus 250 G~~i~~dgG~ 259 (272)
|+++++++|.
T Consensus 192 g~~~~i~~g~ 201 (219)
T 3dqp_A 192 GKVISMHNGK 201 (219)
T ss_dssp TEEEEEEECS
T ss_pred CcEEEeCCCC
Confidence 9999997773
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=190.02 Aligned_cols=233 Identities=15% Similarity=0.066 Sum_probs=159.9
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHH-HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 85 (272)
.+..+..++|+||||||+|+||++++++|+++| ++|+..+|.... .....+.+ ....++.++.+|++|.+++.+++
T Consensus 16 ~n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~ 94 (346)
T 4egb_A 16 ENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHVI 94 (346)
T ss_dssp --------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHH
T ss_pred cccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHHH
Confidence 344456778999999999999999999999999 678887775421 11111111 11246888999999999998888
Q ss_pred HHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC----
Q 024125 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---- 161 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~---- 161 (272)
+.. ++|+|||+|+..... ...++++..+++|+.++.++++++ ++.+.+++|++||...+...
T Consensus 95 ~~~------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vy~~~~~~~ 160 (346)
T 4egb_A 95 KER------DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELV----KKYPHIKLVQVSTDEVYGSLGKTG 160 (346)
T ss_dssp HHH------TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHH----HHSTTSEEEEEEEGGGGCCCCSSC
T ss_pred hhc------CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCEEEEeCchHHhCCCCcCC
Confidence 752 599999999975332 244567889999999999988887 44566799999997554332
Q ss_pred --------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCC--------
Q 024125 162 --------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ-------- 225 (272)
Q Consensus 162 --------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------- 225 (272)
.+...|+.+|.+.+.+++.++.+. +++++.++|+.+.++........+..........+..
T Consensus 161 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (346)
T 4egb_A 161 RFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNV 237 (346)
T ss_dssp CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCE
T ss_pred CcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeE
Confidence 234789999999999999999885 7999999999888765321100122333333333322
Q ss_pred -CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 226 -RVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 226 -~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.+..++|+|++++.++.... .|+.+++.+|..+.
T Consensus 238 ~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s 272 (346)
T 4egb_A 238 RDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEKT 272 (346)
T ss_dssp ECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCEE
T ss_pred EeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCcee
Confidence 22458999999999986433 79999999987544
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=189.30 Aligned_cols=228 Identities=16% Similarity=0.102 Sum_probs=168.0
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+++|+||||||+|+||++++++|+++|++|++++|+.+......+.+. ...++.++.+|+++.+++.++++.+
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------ 79 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF------ 79 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH------
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc------
Confidence 568999999999999999999999999999999998765444433332 2346778899999999998888654
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC------------CCC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------HVG 162 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~------------~~~ 162 (272)
++|+||||||... .+.+.+++++.+++|+.++.++++++.+. .+.++||++||...+. +..
T Consensus 80 ~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~ 152 (357)
T 1rkx_A 80 QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG 152 (357)
T ss_dssp CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred CCCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence 5999999999521 12234567899999999999999998652 2357999999976322 234
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHc------cCCeeEEEeeCCcccChhhH---hhhhCHHHHHHHHhcCC--------CC
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWA------KDNIRTNSVAPWYTKTSLVE---RLLENKEFVDKVIARTP--------LQ 225 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~------~~~i~v~~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~--------~~ 225 (272)
+...|+.+|.+.+.+++.++.++. +.+++++.++||.+.++... .+. +.+........+ ..
T Consensus 153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~ 230 (357)
T 1rkx_A 153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIV--PDILRAFEQSQPVIIRNPHAIR 230 (357)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHH--HHHHHHHHTTCCEECSCTTCEE
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHH--HHHHHHHhcCCCEEECCCCCee
Confidence 567899999999999999999885 45899999999999886531 110 122333222221 12
Q ss_pred CCCCHHHHHHHHHHHhcCC--CCCccccEEEeCCC
Q 024125 226 RVGEPEEVASLVAYLCLPA--ASYITGQIISVDGG 258 (272)
Q Consensus 226 ~~~~~~e~a~~~~~l~~~~--~~~~~G~~i~~dgG 258 (272)
.+..++|++++++.++... .....|+.+++.+|
T Consensus 231 ~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~ 265 (357)
T 1rkx_A 231 PWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN 265 (357)
T ss_dssp CCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred ccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence 3567899999998887421 11235788888764
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=185.66 Aligned_cols=213 Identities=16% Similarity=0.067 Sum_probs=154.7
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++|++|||||+|+||++++++|+++ |++|++++|+.++.+++ ..++.++.+|++|.+++++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~------- 67 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAF------- 67 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHH-------
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHH-------
Confidence 35789999999999999999999999 89999999998665432 235567889999999988877
Q ss_pred CCCccEEEECCCCCCCCCC---------CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC
Q 024125 93 NGKLNILVNNVGTNIRKPT---------IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~ 163 (272)
..+|+||||||....... .+...+++++.+++|+.++.++++++. +.+.++||++||..+..+..+
T Consensus 68 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~ 142 (253)
T 1xq6_A 68 -QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGTNPDHP 142 (253)
T ss_dssp -TTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTTCTTCG
T ss_pred -cCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccCCCCCCc
Confidence 369999999997432110 111223445688999999998888774 345579999999887654444
Q ss_pred Chh-----hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHh--hhhCHHHHHHHHhcCCCCCCCCHHHHHHH
Q 024125 164 GSI-----YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER--LLENKEFVDKVIARTPLQRVGEPEEVASL 236 (272)
Q Consensus 164 ~~~-----Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~a~~ 236 (272)
... |+.+|.+++.+++. .+++++.++||.+.++.... ...... .... .....+.+++|++++
T Consensus 143 ~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~Dva~~ 211 (253)
T 1xq6_A 143 LNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKD--DELL--QTDTKTVPRADVAEV 211 (253)
T ss_dssp GGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEEST--TGGG--GSSCCEEEHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCC--cCCc--CCCCcEEcHHHHHHH
Confidence 333 55699999987753 68999999999998875321 100000 0000 112346789999999
Q ss_pred HHHHhcCCCCCccccEEEeCCCc
Q 024125 237 VAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
+++++... ..+|+.++++++.
T Consensus 212 ~~~~~~~~--~~~g~~~~i~~~~ 232 (253)
T 1xq6_A 212 CIQALLFE--EAKNKAFDLGSKP 232 (253)
T ss_dssp HHHHTTCG--GGTTEEEEEEECC
T ss_pred HHHHHcCc--cccCCEEEecCCC
Confidence 99998643 2479999999863
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=187.78 Aligned_cols=230 Identities=14% Similarity=0.064 Sum_probs=170.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-----CeEEEEEecCCCHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-----FVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
+.+++|+||||||+|+||++++++|+++|++|++++|+........+.+.... .++.++.+|++|.+++.+++
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-- 98 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM-- 98 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT--
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--
Confidence 45678999999999999999999999999999999997554443344433321 46888999999999887777
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC------
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV------ 161 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~------ 161 (272)
.++|+|||+|+.... ..+.+++...+++|+.++.++++++ ++.+.+++|++||...+...
T Consensus 99 ------~~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 164 (351)
T 3ruf_A 99 ------KGVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAA----KNAQVQSFTYAASSSTYGDHPALPKV 164 (351)
T ss_dssp ------TTCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred ------cCCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEecHHhcCCCCCCCCc
Confidence 369999999996322 1234567789999999999998887 44456799999997655332
Q ss_pred -----CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHHHHHHHHhcCCC--------
Q 024125 162 -----GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDKVIARTPL-------- 224 (272)
Q Consensus 162 -----~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~-------- 224 (272)
.+...|+.+|.+.+.+++.++.+. +++++.++|+.+..+....... .+.+........+.
T Consensus 165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~ 241 (351)
T 3ruf_A 165 EENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGET 241 (351)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred cCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCe
Confidence 235789999999999999999886 7999999999887765321100 02233333333322
Q ss_pred -CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 225 -QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 225 -~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..+..++|++++++.++... ....|+.+++.+|..+.
T Consensus 242 ~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s 279 (351)
T 3ruf_A 242 SRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRTT 279 (351)
T ss_dssp EECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE
T ss_pred EEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCccc
Confidence 13456999999999888542 34579999999886554
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-24 Score=173.06 Aligned_cols=198 Identities=15% Similarity=0.079 Sum_probs=148.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++|||||+|+||++++++|+++|++|++++|+.++.+.. ...++.++.+|++|.+++.+++ ..+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~--------~~~ 68 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTV--------AGQ 68 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHH--------TTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHH--------cCC
Confidence 47999999999999999999999999999999987654211 1346778899999999887776 358
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC----CChhhHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG----SGSIYGATKA 172 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~----~~~~Y~~sK~ 172 (272)
|+||||||..... +. .++|+.++.++++++. +.+.+++|++||.......+ +...|+.+|.
T Consensus 69 d~vi~~a~~~~~~---~~--------~~~n~~~~~~~~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~ 133 (206)
T 1hdo_A 69 DAVIVLLGTRNDL---SP--------TTVMSEGARNIVAAMK----AHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI 133 (206)
T ss_dssp SEEEECCCCTTCC---SC--------CCHHHHHHHHHHHHHH----HHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred CEEEECccCCCCC---Cc--------cchHHHHHHHHHHHHH----HhCCCeEEEEeeeeeccCcccccccchhHHHHHH
Confidence 9999999964331 11 1378888877777664 44557999999987655444 5678999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcc-cChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYT-KTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+++.+++. .+++++.++||.+ .++....+... ....+.+.+.+++|+++.+.+++... ..+|+
T Consensus 134 ~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~-------~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~ 197 (206)
T 1hdo_A 134 RMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVT-------LDGRGPSRVISKHDLGHFMLRCLTTD--EYDGH 197 (206)
T ss_dssp HHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEE-------SSSCSSCSEEEHHHHHHHHHHTTSCS--TTTTC
T ss_pred HHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEec-------ccCCCCCCccCHHHHHHHHHHHhcCc--ccccc
Confidence 99998742 5899999999988 44432211110 01122246778999999999999653 36899
Q ss_pred EEEeCCCc
Q 024125 252 IISVDGGF 259 (272)
Q Consensus 252 ~i~~dgG~ 259 (272)
+++++||+
T Consensus 198 ~~~i~~g~ 205 (206)
T 1hdo_A 198 STYPSHQY 205 (206)
T ss_dssp EEEEECCC
T ss_pred ceeeeccc
Confidence 99999985
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-24 Score=188.19 Aligned_cols=209 Identities=12% Similarity=0.092 Sum_probs=153.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++||||||+|+||++++++|+++|++|++++|+.+..+++ .. ..+.++.+|++|.+++++++ ..+|
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~Dl~d~~~~~~~~--------~~~d 79 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY--LEPECRVAEMLDHAGLERAL--------RGLD 79 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG--GCCEEEECCTTCHHHHHHHT--------TTCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc--CCeEEEEecCCCHHHHHHHH--------cCCC
Confidence 5899999999999999999999999999999987654322 11 25677899999999887776 3699
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC--------------
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-------------- 163 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~-------------- 163 (272)
+|||||+... .+.+++++.+++|+.++.++++++.+. +.++||++||...+...+.
T Consensus 80 ~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~ 149 (342)
T 2x4g_A 80 GVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP 149 (342)
T ss_dssp EEEEC------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred EEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence 9999999632 134567889999999999999998653 4579999999877654433
Q ss_pred --ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhh-HhhhhCHHHHHHHHhcCCC----C--CCCCHHHHH
Q 024125 164 --GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV-ERLLENKEFVDKVIARTPL----Q--RVGEPEEVA 234 (272)
Q Consensus 164 --~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~-~~~~~~~~~~~~~~~~~~~----~--~~~~~~e~a 234 (272)
...|+.+|.+.+.+++.++. . +++++.++||.+.++.. ... ............+. . .+..++|++
T Consensus 150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 223 (342)
T 2x4g_A 150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRNVIDAAEAG 223 (342)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEEEEEHHHHH
T ss_pred cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCcceeeHHHHH
Confidence 67899999999999999876 3 89999999999988764 210 12233333332221 1 256899999
Q ss_pred HHHHHHhcCCCCCccccEEEeCCCc
Q 024125 235 SLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 235 ~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
+++++++.... .|+.+++++|.
T Consensus 224 ~~~~~~~~~~~---~g~~~~v~~~~ 245 (342)
T 2x4g_A 224 RGLLMALERGR---IGERYLLTGHN 245 (342)
T ss_dssp HHHHHHHHHSC---TTCEEEECCEE
T ss_pred HHHHHHHhCCC---CCceEEEcCCc
Confidence 99999986433 28999999986
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.5e-24 Score=184.76 Aligned_cols=218 Identities=17% Similarity=0.098 Sum_probs=157.5
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+...+.++|+||||||+|+||++++++|+++|++|++++|+.+. ..+.++.+|++|.+++.+++
T Consensus 12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~---- 75 (347)
T 4id9_A 12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAI---- 75 (347)
T ss_dssp ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHH----
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHH----
Confidence 34456789999999999999999999999999999999998654 35667899999999988777
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC----------
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---------- 159 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~---------- 159 (272)
.++|+|||+|+.... +.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 76 ----~~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~ 141 (347)
T 4id9_A 76 ----MGVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAA----SAAGVRRFVFASSGEVYPENRPEFLPVT 141 (347)
T ss_dssp ----TTCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGTTTTSCSSSSBC
T ss_pred ----hCCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEECCHHHhCCCCCCCCCcC
Confidence 369999999996432 33445899999999999988887 445667999999955432
Q ss_pred ---CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCccc-------------ChhhHhhh--------hC---H
Q 024125 160 ---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK-------------TSLVERLL--------EN---K 212 (272)
Q Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~-------------t~~~~~~~--------~~---~ 212 (272)
+..+...|+.+|.+.+.+++.++.+. +++++.++|+.+. .+...... .. .
T Consensus 142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~ 218 (347)
T 4id9_A 142 EDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIA 218 (347)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHH
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHH
Confidence 23456789999999999999998874 8999999999887 33311100 00 1
Q ss_pred HHHHHHHhcCC---------CCCC----CCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 213 EFVDKVIARTP---------LQRV----GEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 213 ~~~~~~~~~~~---------~~~~----~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.+........+ ...+ ..++|+|++++.++.... ..|+.+++.+|..+.
T Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s 279 (347)
T 4id9_A 219 ELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPAD 279 (347)
T ss_dssp HHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEE
T ss_pred HHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCccc
Confidence 12222222222 1223 678999999999996532 348999999987554
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-23 Score=184.91 Aligned_cols=227 Identities=14% Similarity=0.105 Sum_probs=160.3
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH----------------HHHHHH-HhCCCeEEEEEecCCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN----------------KCLKEW-QSKGFVVSGSVCDAAS 77 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~----------------~~~~~~-~~~~~~~~~~~~D~~~ 77 (272)
..+++||||||+|+||++++++|+++|++|++++|...... +...++ .....++.++.+|++|
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 46889999999999999999999999999999998754321 111111 1123467788999999
Q ss_pred HHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CeEEEecCCC
Q 024125 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVG 156 (272)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~ii~vsS~~ 156 (272)
.++++++++.. ++|+||||||....... ..+.++++..+++|+.++.++++++.+. +. .+||++||..
T Consensus 89 ~~~~~~~~~~~------~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~ 157 (404)
T 1i24_A 89 FEFLAESFKSF------EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMG 157 (404)
T ss_dssp HHHHHHHHHHH------CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGG
T ss_pred HHHHHHHHhcc------CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHH
Confidence 99998888654 59999999996432211 2256677889999999999999988543 33 4999999975
Q ss_pred CCC------------------------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhh----
Q 024125 157 GLS------------------------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERL---- 208 (272)
Q Consensus 157 ~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~---- 208 (272)
.+. +..+...|+.||++.+.+++.++.++ |+++++++||.+.++.....
T Consensus 158 vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~~ 234 (404)
T 1i24_A 158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHE 234 (404)
T ss_dssp GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSG
T ss_pred HhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCcccccc
Confidence 432 23345789999999999999998887 89999999999987753210
Q ss_pred -------------hhCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhcCCCCCccc--cEEEeCC
Q 024125 209 -------------LENKEFVDKVIARTPL---------QRVGEPEEVASLVAYLCLPAASYITG--QIISVDG 257 (272)
Q Consensus 209 -------------~~~~~~~~~~~~~~~~---------~~~~~~~e~a~~~~~l~~~~~~~~~G--~~i~~dg 257 (272)
.....++.......+. ..+..++|+|++++.++.... ..| +.+++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~ 305 (404)
T 1i24_A 235 ELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT 305 (404)
T ss_dssp GGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred ccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence 0001233333332221 133569999999998885322 236 6788765
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=189.43 Aligned_cols=223 Identities=15% Similarity=0.079 Sum_probs=162.6
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
..+++|+||||||+|+||++++++|+++| ++|++++|+.+...+. +. ...++.++.+|++|.+++++++
T Consensus 28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~-~~~~v~~~~~Dl~d~~~l~~~~------ 97 (377)
T 2q1s_A 28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP-DHPAVRFSETSITDDALLASLQ------ 97 (377)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC-CCTTEEEECSCTTCHHHHHHCC------
T ss_pred HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc-CCCceEEEECCCCCHHHHHHHh------
Confidence 45788999999999999999999999999 9999999976432111 11 1346788899999998876665
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCC-----------
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLS----------- 159 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~----------- 159 (272)
.++|+|||||+..... .+.+++++.+++|+.++.++++++ ++. +.++||++||...+.
T Consensus 98 --~~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E 167 (377)
T 2q1s_A 98 --DEYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAKATE 167 (377)
T ss_dssp --SCCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--------------C
T ss_pred --hCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcCccc
Confidence 4799999999963211 133567889999999999988887 445 557999999975321
Q ss_pred -----CC-CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhh---------Hhh----hhCHHHHHHHHh
Q 024125 160 -----HV-GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV---------ERL----LENKEFVDKVIA 220 (272)
Q Consensus 160 -----~~-~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~---------~~~----~~~~~~~~~~~~ 220 (272)
+. .+...|+.+|.+.+.+++.++.++ +++++.++||.+.++.. ... ...+.+......
T Consensus 168 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 244 (377)
T 2q1s_A 168 ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALK 244 (377)
T ss_dssp CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHT
T ss_pred ccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHc
Confidence 22 456789999999999999998876 79999999999988754 110 001223333433
Q ss_pred cCCCC---------CCCCHHHHHHH-HHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 221 RTPLQ---------RVGEPEEVASL-VAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 221 ~~~~~---------~~~~~~e~a~~-~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..+.. .+..++|+|++ ++.++.... +| .+++.+|..+.
T Consensus 245 g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~s 292 (377)
T 2q1s_A 245 GMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKETS 292 (377)
T ss_dssp TCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCEE
T ss_pred CCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCcee
Confidence 33322 23458999999 988886532 68 99999886543
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=180.19 Aligned_cols=198 Identities=14% Similarity=0.093 Sum_probs=139.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
....|++|||||+|+||++++++|+++| ++|++++|+.++.++.. ...+.++.+|++|.+++++++
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~------- 86 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY------PTNSQIIMGDVLNHAALKQAM------- 86 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC------CTTEEEEECCTTCHHHHHHHH-------
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc------cCCcEEEEecCCCHHHHHHHh-------
Confidence 3456899999999999999999999999 89999999987643221 236788899999999988887
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh-------
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS------- 165 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~------- 165 (272)
..+|+||||++.. +.+ ..++.+++.|++.+.++||++||...+...+...
T Consensus 87 -~~~D~vv~~a~~~--------~~~--------------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~ 143 (236)
T 3qvo_A 87 -QGQDIVYANLTGE--------DLD--------------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAV 143 (236)
T ss_dssp -TTCSEEEEECCST--------THH--------------HHHHHHHHHHHHTTCCEEEEECCCCC---------------
T ss_pred -cCCCEEEEcCCCC--------chh--------------HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhc
Confidence 3689999999851 111 2356788888888888999999988765543321
Q ss_pred --hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC-CCCCCCHHHHHHHHHHHhc
Q 024125 166 --IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTP-LQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 166 --~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~a~~~~~l~~ 242 (272)
.+...|... ...+.+.+|++++|+||++.++....+... ....+ .+++.+++|+|++++++++
T Consensus 144 ~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~-------~~~~~~~~~~i~~~DvA~~i~~ll~ 209 (236)
T 3qvo_A 144 IGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELT-------SRNEPFKGTIVSRKSVAALITDIID 209 (236)
T ss_dssp -CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEE-------CTTSCCSCSEEEHHHHHHHHHHHHH
T ss_pred ccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEe-------ccCCCCCCcEECHHHHHHHHHHHHc
Confidence 111222221 223446799999999999988754321100 01122 3566899999999999998
Q ss_pred CCCCCccccEEEeCCCcCCC
Q 024125 243 PAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~~ 262 (272)
+...++ |+.+.++++.+..
T Consensus 210 ~~~~~~-g~~~~i~~~~~~~ 228 (236)
T 3qvo_A 210 KPEKHI-GENIGINQPGTDG 228 (236)
T ss_dssp STTTTT-TEEEEEECSSCCC
T ss_pred Cccccc-CeeEEecCCCCCC
Confidence 766554 9999999886654
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=190.26 Aligned_cols=223 Identities=14% Similarity=0.103 Sum_probs=154.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHH--CCCEEEEeeCChHHHHHH-------HHHHHhCCCeEEEEEecCCCHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAG--LGAVVHTCSRNEVELNKC-------LKEWQSKGFVVSGSVCDAASPDQREK 83 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~--~G~~v~~~~r~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~ 83 (272)
+++++|+||||||+|+||++++++|++ .|++|++++|+....... .+........+.++.+|++|.+++++
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence 578899999999999999999999999 999999999865421100 00011123456788999999998877
Q ss_pred HHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC---
Q 024125 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--- 160 (272)
Q Consensus 84 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~--- 160 (272)
+ .. .++|+||||||.... +.++++..+++|+.++.++++++ ++.+ .+||++||...+..
T Consensus 86 ~------~~-~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa----~~~~-~~~V~~SS~~vyg~~~~ 147 (362)
T 3sxp_A 86 L------EK-LHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIA----RSKK-AKVIYASSAGVYGNTKA 147 (362)
T ss_dssp H------TT-SCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEEEEGGGGCSCCS
T ss_pred h------hc-cCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEeCcHHHhCCCCC
Confidence 6 12 579999999995322 33457889999999999999988 3344 46999999554332
Q ss_pred -------CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHHHHHHHHhcCCC-----
Q 024125 161 -------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDKVIARTPL----- 224 (272)
Q Consensus 161 -------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~----- 224 (272)
..+...|+.+|.+.+.+++.++.+ +.+..+.|+.+..+....... .+.+........+.
T Consensus 148 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (362)
T 3sxp_A 148 PNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEF 222 (362)
T ss_dssp SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGG
T ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECC
Confidence 223456999999999999888766 556666666555443221100 01233333332222
Q ss_pred ----CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 225 ----QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 225 ----~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..+..++|+|+++++++... .+| .+++.+|..+.
T Consensus 223 g~~~~~~i~v~Dva~ai~~~~~~~---~~g-~~~i~~~~~~s 260 (362)
T 3sxp_A 223 GEQLRDFVYIEDVIQANVKAMKAQ---KSG-VYNVGYSQARS 260 (362)
T ss_dssp GCCEEECEEHHHHHHHHHHHTTCS---SCE-EEEESCSCEEE
T ss_pred CCeEEccEEHHHHHHHHHHHHhcC---CCC-EEEeCCCCCcc
Confidence 23456999999999998754 258 99999886543
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-24 Score=187.11 Aligned_cols=220 Identities=17% Similarity=0.115 Sum_probs=161.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHH-HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~--G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
|+||||||+|+||++++++|+++ |++|++++|+... ..+..+++ ...++.++.+|++|.+++++++ .
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~--------~ 74 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLA--------A 74 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHH--------T
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHh--------h
Confidence 78999999999999999999998 8999999986421 11111111 1246788899999999887777 3
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC---------------
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--------------- 159 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~--------------- 159 (272)
.+|+||||||.... +.+.++++..+++|+.++.++++++.+. + ++||++||...+.
T Consensus 75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~ 145 (348)
T 1oc2_A 75 KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP 145 (348)
T ss_dssp TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence 57999999996421 1233556789999999999999998764 3 4999999965332
Q ss_pred --------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC--------
Q 024125 160 --------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTP-------- 223 (272)
Q Consensus 160 --------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------- 223 (272)
+..+...|+.+|++.+.+++.++.++ +++++.++||.+.++........+.+........+
T Consensus 146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (348)
T 1oc2_A 146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK 222 (348)
T ss_dssp TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSC
T ss_pred CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCC
Confidence 23455789999999999999999887 79999999999988764210000122333322222
Q ss_pred -CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 224 -LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 224 -~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
...+..++|+++++++++... .+|+.+++++|..+.
T Consensus 223 ~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~s 259 (348)
T 1oc2_A 223 NVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKN 259 (348)
T ss_dssp CEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEE
T ss_pred ceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCCC
Confidence 124567999999999998642 479999999986443
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=187.45 Aligned_cols=217 Identities=18% Similarity=0.098 Sum_probs=160.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|+||||||+|+||++++++|+++|++|++++|+.+...+.. ...+.++.+|++|.+ +.+++ .. |
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~--------~~-d 64 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------NPSAELHVRDLKDYS-WGAGI--------KG-D 64 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTC--------CC-S
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------CCCceEEECccccHH-HHhhc--------CC-C
Confidence 57999999999999999999999999999998765432211 245677899999987 54444 23 9
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CCCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~~~~~~ 166 (272)
+|||||+.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+. +..+...
T Consensus 65 ~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~ 136 (312)
T 3ko8_A 65 VVFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWAR----QTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISV 136 (312)
T ss_dssp EEEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred EEEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence 99999995322 23455678899999999999999873 34557999999976542 2344688
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhc-CC---------CCCCCCHHHHHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR-TP---------LQRVGEPEEVASL 236 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~e~a~~ 236 (272)
|+.+|.+.+.+++.++.++ +++++.++||.+.++...... ...+....... .+ ...+..++|++++
T Consensus 137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 212 (312)
T 3ko8_A 137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGV-IYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEA 212 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSH-HHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCCh-HHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHH
Confidence 9999999999999999987 899999999999887643110 01223322222 11 1234569999999
Q ss_pred HHHHhcC-CCCCccccEEEeCCCcCCC
Q 024125 237 VAYLCLP-AASYITGQIISVDGGFTAN 262 (272)
Q Consensus 237 ~~~l~~~-~~~~~~G~~i~~dgG~~~~ 262 (272)
++.++.. ......|+.+++.+|..++
T Consensus 213 ~~~~~~~~~~~~~~~~~~ni~~~~~~s 239 (312)
T 3ko8_A 213 TLAAWKKFEEMDAPFLALNVGNVDAVR 239 (312)
T ss_dssp HHHHHHHHHHSCCSEEEEEESCSSCEE
T ss_pred HHHHHHhccccCCCCcEEEEcCCCcee
Confidence 9999863 2234578999999886544
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=186.42 Aligned_cols=224 Identities=13% Similarity=0.082 Sum_probs=164.2
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+.++.++|+||||||+|+||++++++|+++|++|++++|+.+..... ...++.++.+|++|.+++.+++
T Consensus 23 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~----- 91 (379)
T 2c5a_A 23 QYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVT----- 91 (379)
T ss_dssp CSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHH-----
T ss_pred ccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHh-----
Confidence 33455678999999999999999999999999999999976542211 1125677899999999888776
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----------- 159 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~----------- 159 (272)
.++|+|||||+...... ...+++++.+++|+.++.++++++. +.+.++||++||...+.
T Consensus 92 ---~~~d~Vih~A~~~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v~~~~~~~~~~~~~ 161 (379)
T 2c5a_A 92 ---EGVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACIYPEFKQLETTNVS 161 (379)
T ss_dssp ---TTCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred ---CCCCEEEECceecCccc---ccccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehheeCCCCCCCccCCC
Confidence 36999999999643211 0123567899999999999999874 44557999999976543
Q ss_pred -------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHHHHHHHHhcCC-----
Q 024125 160 -------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDKVIARTP----- 223 (272)
Q Consensus 160 -------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~----- 223 (272)
+..+...|+.+|.+.+.+++.++.++ +++++.++||.+.++....... ...+........+
T Consensus 162 ~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (379)
T 2c5a_A 162 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMW 238 (379)
T ss_dssp ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEE
T ss_pred cCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEe
Confidence 23445789999999999999998875 7999999999998875321100 0123333322221
Q ss_pred -----CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 224 -----LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 224 -----~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
...+..++|++++++.++... .|+.+++.+|..+.
T Consensus 239 g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~s 278 (379)
T 2c5a_A 239 GDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 278 (379)
T ss_dssp SCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEE
T ss_pred CCCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCccC
Confidence 124566999999999998643 47889999886544
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-24 Score=184.68 Aligned_cols=215 Identities=13% Similarity=0.015 Sum_probs=151.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
..+++|+||||||+|+||++++++|+++|++|++++|+.....+.. .. ..++.++.+|++|.++++++++.
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l---~~-~~~~~~~~~Dl~d~~~~~~~~~~----- 87 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHL---KD-HPNLTFVEGSIADHALVNQLIGD----- 87 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS---CC-CTTEEEEECCTTCHHHHHHHHHH-----
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhH---hh-cCCceEEEEeCCCHHHHHHHHhc-----
Confidence 3467899999999999999999999999999999999754321111 11 13577889999999998888764
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC----CC-------
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----HV------- 161 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~----~~------- 161 (272)
.++|+||||||..... +.++++ +++|+.++.++++++.+ .+.++||++||...+. ..
T Consensus 88 -~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~ 155 (333)
T 2q1w_A 88 -LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHP 155 (333)
T ss_dssp -HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSC
T ss_pred -cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCC
Confidence 2699999999974332 224444 99999999999998855 4557999999977654 21
Q ss_pred -CCC-hhhHHHHHHHHHHHHH-HHHHHccCCeeEEEeeCCcccChhhH-hhhhCHHHHHHHHhc------CCCCCCCCHH
Q 024125 162 -GSG-SIYGATKAAMNQLTRN-LACEWAKDNIRTNSVAPWYTKTSLVE-RLLENKEFVDKVIAR------TPLQRVGEPE 231 (272)
Q Consensus 162 -~~~-~~Y~~sK~a~~~~~~~-la~el~~~~i~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~ 231 (272)
.+. ..|+.+|++.+.+++. ++ ++..+.|+.+..+... ... +.+....... .+...+..++
T Consensus 156 ~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~ 225 (333)
T 2q1w_A 156 RNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPL--PIFFQRLSEGKKCFVTKARRDFVFVK 225 (333)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHH--HHHHHHHHTTCCCEEEECEECEEEHH
T ss_pred CCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHH--HHHHHHHHcCCeeeCCCceEeeEEHH
Confidence 234 7899999999999987 65 4566667655544310 000 1122222111 1233457899
Q ss_pred HHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 232 EVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 232 e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
|+|+++++++.... |+.+++++|..+.
T Consensus 226 Dva~ai~~~~~~~~----g~~~~v~~~~~~s 252 (333)
T 2q1w_A 226 DLARATVRAVDGVG----HGAYHFSSGTDVA 252 (333)
T ss_dssp HHHHHHHHHHTTCC----CEEEECSCSCCEE
T ss_pred HHHHHHHHHHhcCC----CCEEEeCCCCCcc
Confidence 99999999986533 8999999987654
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.2e-24 Score=184.57 Aligned_cols=221 Identities=15% Similarity=0.112 Sum_probs=150.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.+++|+||||||+|+||++++++|+++|++|+++.|+.+..+.... +... ..++.++.+|++|.+++++++
T Consensus 2 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----- 75 (337)
T 2c29_D 2 GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAI----- 75 (337)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHH-----
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHH-----
Confidence 3578999999999999999999999999999998888664332221 1111 125778899999998887776
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC---------
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--------- 161 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~--------- 161 (272)
..+|+|||+|+.. .....+ ..++.+++|+.++.++++++.+.. ..++||++||..+..+.
T Consensus 76 ---~~~d~Vih~A~~~---~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E 144 (337)
T 2c29_D 76 ---KGCTGVFHVATPM---DFESKD--PENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDE 144 (337)
T ss_dssp ---TTCSEEEECCCCC---CSSCSS--HHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECT
T ss_pred ---cCCCEEEEecccc---CCCCCC--hHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCc
Confidence 3589999999853 111112 235689999999999999886532 24799999997643211
Q ss_pred -------------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHH---HH------
Q 024125 162 -------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDK---VI------ 219 (272)
Q Consensus 162 -------------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~---~~------ 219 (272)
++...|+.||.+.+.+++.++.+. |+++++++|+.+.++....... ...... ..
T Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g~~~~~ 220 (337)
T 2c29_D 145 SCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIMSSMP-PSLITALSPITGNEAHY 220 (337)
T ss_dssp TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSCSSCC-HHHHHHTHHHHTCGGGH
T ss_pred ccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcCCCccc
Confidence 123469999999999998877654 8999999999998876322110 110000 00
Q ss_pred hcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCC
Q 024125 220 ARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDG 257 (272)
Q Consensus 220 ~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dg 257 (272)
...+..++..++|+++++++++.. ....|.++..++
T Consensus 221 ~~~~~~~~i~v~Dva~a~~~~~~~--~~~~~~~~~~~~ 256 (337)
T 2c29_D 221 SIIRQGQFVHLDDLCNAHIYLFEN--PKAEGRYICSSH 256 (337)
T ss_dssp HHHTEEEEEEHHHHHHHHHHHHHC--TTCCEEEEECCE
T ss_pred cccCCCCEEEHHHHHHHHHHHhcC--cccCceEEEeCC
Confidence 001223478999999999998854 233566544333
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.4e-24 Score=185.25 Aligned_cols=222 Identities=18% Similarity=0.143 Sum_probs=159.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC---C---CEEEEeeCChHH-HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGL---G---AVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~---G---~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+++|||||+|+||++++++|+++ | ++|++++|+... ..+..+.+. ...++.++.+|++|.+++++++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~----- 74 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLAREL----- 74 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence 36999999999999999999997 8 899999986421 001111111 1346788899999999887776
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----------- 159 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~----------- 159 (272)
.++|+|||||+.... +.+.+++++.+++|+.++.++++++.+. +.++||++||...+.
T Consensus 75 ---~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~ 143 (337)
T 1r6d_A 75 ---RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESS 143 (337)
T ss_dssp ---TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred ---cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCC
Confidence 479999999996321 1123456789999999999999988553 457999999965432
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC---------CCCCCH
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL---------QRVGEP 230 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 230 (272)
+..+...|+.+|++.+.+++.++.++ +++++.++||.+.++......-.+.+........+. ..+..+
T Consensus 144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 220 (337)
T 1r6d_A 144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHT 220 (337)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeH
Confidence 23456789999999999999999886 799999999999887642100001223333322221 234578
Q ss_pred HHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 231 EEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 231 ~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+|+++++..++... .+|+.+++++|..+.
T Consensus 221 ~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s 249 (337)
T 1r6d_A 221 DDHCRGIALVLAGG---RAGEIYHIGGGLELT 249 (337)
T ss_dssp HHHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred HHHHHHHHHHHhCC---CCCCEEEeCCCCCcc
Confidence 99999999988632 369999999986543
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=185.87 Aligned_cols=214 Identities=16% Similarity=0.117 Sum_probs=155.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|+||||||+|+||++++++|+++|..|++..|+....+. ....+.++.+|+++ +++.+++ .++|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~--------~~~d 65 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYL--------KGAE 65 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHH--------TTCS
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHh--------cCCC
Confidence 579999999999999999999999666665554432211 13457788999998 7777666 4699
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CCCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~~~~~~ 166 (272)
+|||+|+... ...+.+++++.+++|+.++.++++++ ++.+.++||++||...+. +..+...
T Consensus 66 ~vih~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~ 137 (313)
T 3ehe_A 66 EVWHIAANPD----VRIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL 137 (313)
T ss_dssp EEEECCCCCC----CC-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred EEEECCCCCC----hhhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence 9999999532 22344567889999999999998886 444567999999976542 3445678
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhc-C---------CCCCCCCHHHHHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR-T---------PLQRVGEPEEVASL 236 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~e~a~~ 236 (272)
|+.+|.+.+.+++.++.++ +++++.++|+.+.++...... ...+....... . ....+..++|++++
T Consensus 138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 213 (313)
T 3ehe_A 138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGV-IYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDA 213 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSH-HHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcCh-HHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHH
Confidence 9999999999999999886 899999999999876432100 01222222221 1 11245678999999
Q ss_pred HHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 237 VAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++.++. ....|+.+++.+|..+.
T Consensus 214 ~~~~~~---~~~~~~~~ni~~~~~~s 236 (313)
T 3ehe_A 214 MLFGLR---GDERVNIFNIGSEDQIK 236 (313)
T ss_dssp HHHHTT---CCSSEEEEECCCSCCEE
T ss_pred HHHHhc---cCCCCceEEECCCCCee
Confidence 999986 33458999999986544
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=181.52 Aligned_cols=228 Identities=19% Similarity=0.190 Sum_probs=159.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH------HHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE------LNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+|+||||||+|+||++++++|+++|++|++++|+... ..+..+++.. .+.++.++.+|++|.+++++++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-- 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK-- 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence 5899999999999999999999999999999875322 1122222222 234677889999999998888764
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC---------
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--------- 160 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~--------- 160 (272)
.++|+|||||+...... +.+++++.+++|+.++.++++++ ++.+.++||++||...+..
T Consensus 80 ----~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~E~ 147 (348)
T 1ek6_A 80 ----YSFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEA 147 (348)
T ss_dssp ----CCEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred ----cCCCEEEECCCCcCccc----hhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCCCCCCcCCC
Confidence 16999999999642211 34567889999999999998875 4455679999999765431
Q ss_pred --C-CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhh------------HhhhhCHHHHHHHH-hcCC-
Q 024125 161 --V-GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV------------ERLLENKEFVDKVI-ARTP- 223 (272)
Q Consensus 161 --~-~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~------------~~~~~~~~~~~~~~-~~~~- 223 (272)
. +....|+.+|++.+.+++.++.+ ..++++..++|+.+..+.. ..+. +....... ...+
T Consensus 148 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 223 (348)
T 1ek6_A 148 HPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLM--PYVSQVAIGRREAL 223 (348)
T ss_dssp SCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHH--HHHHHHHHTSSSCE
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHH--HHHHHHHHhcCCCe
Confidence 1 22678999999999999999888 3469999999987765421 0010 11112111 1111
Q ss_pred --------------CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 224 --------------LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 224 --------------~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
...+..++|++++++.++........++.+++.+|..+.
T Consensus 224 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s 276 (348)
T 1ek6_A 224 NVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS 276 (348)
T ss_dssp EEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred EEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCcc
Confidence 113467899999999888532212224899998876543
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.6e-24 Score=190.42 Aligned_cols=222 Identities=12% Similarity=0.021 Sum_probs=158.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH---HHHHHHHHHHh---------CCCeEEEEEecCCCHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV---ELNKCLKEWQS---------KGFVVSGSVCDAASPDQR 81 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~---~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~ 81 (272)
...+|+||||||+|+||++++++|++.|++|++++|+.+ ..+.+.+.+.. ...++.++.+|+++.+++
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 356789999999999999999999999999999999876 33333333221 135788899999998877
Q ss_pred HHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC----
Q 024125 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG---- 157 (272)
Q Consensus 82 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~---- 157 (272)
. .+ +++|+|||||+... ..++++..+++|+.++.++++++.+ +..+||++||...
T Consensus 146 ~--------~~-~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~~ 204 (427)
T 4f6c_A 146 V--------LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYF 204 (427)
T ss_dssp C--------CS-SCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSEE
T ss_pred C--------Cc-CCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCCc
Confidence 6 22 68999999999642 2356788999999999999998855 4479999999876
Q ss_pred --------------CCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-------CHHHHH
Q 024125 158 --------------LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-------NKEFVD 216 (272)
Q Consensus 158 --------------~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-------~~~~~~ 216 (272)
..+..+...|+.+|.+.+.+++.++. .|++++.++||.+.++....... ......
T Consensus 205 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~ 280 (427)
T 4f6c_A 205 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMN 280 (427)
T ss_dssp CSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHH
T ss_pred cCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHH
Confidence 00123668899999999999998754 58999999999988765432100 012222
Q ss_pred HHHhcC--------CCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 217 KVIART--------PLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 217 ~~~~~~--------~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
...... ....+..++|+|++++.++.... .|+++++++|..+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s~ 332 (427)
T 4f6c_A 281 DLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPV 332 (427)
T ss_dssp HHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEEH
T ss_pred HHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCcH
Confidence 222221 12346789999999999986543 799999999876653
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-23 Score=183.55 Aligned_cols=172 Identities=19% Similarity=0.174 Sum_probs=134.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEeeCChHH---------HHHHHHHHHhCC-----Ce---EEEEEecCCCH
Q 024125 17 GMTALVTGGTRGIGQATVEELA-GLGAVVHTCSRNEVE---------LNKCLKEWQSKG-----FV---VSGSVCDAASP 78 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~-~~G~~v~~~~r~~~~---------~~~~~~~~~~~~-----~~---~~~~~~D~~~~ 78 (272)
+++||||||+|+||++++++|+ ++|++|++++|+... .+.+.+.+.... .. +.++.+|++|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4689999999999999999999 999999999987543 333332233221 13 77889999999
Q ss_pred HHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC
Q 024125 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL 158 (272)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~ 158 (272)
+++++++++ + +++|+|||||+..... .+.+++++.+++|+.++.++++++ ++.+.++||++||...+
T Consensus 82 ~~~~~~~~~----~-~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~SS~~v~ 148 (397)
T 1gy8_A 82 DFLNGVFTR----H-GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF 148 (397)
T ss_dssp HHHHHHHHH----S-CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT
T ss_pred HHHHHHHHh----c-CCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEECCHHHh
Confidence 998887764 3 4699999999964321 134567889999999999999876 44556799999997654
Q ss_pred CCCC------------------CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChh
Q 024125 159 SHVG------------------SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (272)
Q Consensus 159 ~~~~------------------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~ 204 (272)
.... +...|+.+|++.+.+++.++.++ ++++++++|+.+..+.
T Consensus 149 g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~ 209 (397)
T 1gy8_A 149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH 209 (397)
T ss_dssp BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred CCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence 3222 25789999999999999999987 8999999999886653
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-24 Score=184.55 Aligned_cols=217 Identities=20% Similarity=0.140 Sum_probs=157.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+++|||||+|+||++++++|+++|++|++++|..+...+ .....+.++.+|++|.+++++++++. ++|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 68 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFREF------RPT 68 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHhc------CCC
Confidence 369999999999999999999999999999885322110 01124556789999999988887642 689
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCC-CCCC------------CCCCC
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV-GGLS------------HVGSG 164 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~-~~~~------------~~~~~ 164 (272)
+|||+|+.... ..+.++++..+++|+.++.++++++. +.+.++||++||. ..+. +..+.
T Consensus 69 ~vi~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~ 140 (311)
T 2p5y_A 69 HVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK 140 (311)
T ss_dssp EEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC
T ss_pred EEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC
Confidence 99999996321 12345678899999999999999874 4455799999997 2111 11245
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---CHHHHHHHHhcCC--------------CCCC
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---NKEFVDKVIARTP--------------LQRV 227 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~--------------~~~~ 227 (272)
..|+.||++.+.+++.++.++ +++++.++||.+.++....... .+.+........+ ...+
T Consensus 141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 217 (311)
T 2p5y_A 141 SPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDY 217 (311)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECE
T ss_pred ChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEee
Confidence 789999999999999999886 7999999999998875321100 0122222222222 1234
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..++|+++++++++... |+.+++++|..++
T Consensus 218 i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~s 247 (311)
T 2p5y_A 218 VYVGDVAEAHALALFSL-----EGIYNVGTGEGHT 247 (311)
T ss_dssp EEHHHHHHHHHHHHHHC-----CEEEEESCSCCEE
T ss_pred EEHHHHHHHHHHHHhCC-----CCEEEeCCCCCcc
Confidence 57999999999988542 8899999987554
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=175.47 Aligned_cols=198 Identities=18% Similarity=0.188 Sum_probs=149.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||+|+||++++++|+++|++|++++|+.+... ...+.++.+|++|.+++.+++ ..+|
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~--------~~~d 65 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLV--------KDCD 65 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHH--------TTCS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHH--------cCCC
Confidence 68999999999999999999999999999999865311 124677889999999887777 3699
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC------------CCh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG------------SGS 165 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~------------~~~ 165 (272)
+|||||+... .+++++.+++|+.++.++++++.+ .+.++||++||...+...+ +..
T Consensus 66 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~ 133 (267)
T 3ay3_A 66 GIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS 133 (267)
T ss_dssp EEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred EEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence 9999999741 134578999999999999998743 4567999999987654322 357
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcc-cChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYT-KTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
.|+.+|++.+.+++.++. ..+++++.++||.+ .++.. ... ...+.+++|+++.+..++...
T Consensus 134 ~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~~------~~~---------~~~~~~~~dva~~~~~~~~~~ 195 (267)
T 3ay3_A 134 LYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPKD------ARM---------MATWLSVDDFMRLMKRAFVAP 195 (267)
T ss_dssp HHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCCS------HHH---------HHHBCCHHHHHHHHHHHHHSS
T ss_pred hHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCCC------CCe---------eeccccHHHHHHHHHHHHhCC
Confidence 899999999999998865 35899999999987 44421 111 012468999999999888643
Q ss_pred CCCccccEEEeCCCcCCCCC
Q 024125 245 ASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~~~ 264 (272)
. ..+..+++.++......
T Consensus 196 ~--~~~~~~~~~~~~~~~~~ 213 (267)
T 3ay3_A 196 K--LGCTVVYGASANTESWW 213 (267)
T ss_dssp C--CCEEEEEECCSCSSCCB
T ss_pred C--CCceeEecCCCcccccc
Confidence 2 22455565555444433
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-22 Score=178.03 Aligned_cols=228 Identities=15% Similarity=0.050 Sum_probs=156.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhCCC-eEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
|+||||||+|+||++++++|+++|++|++++|+.+. ++.+.+++...+. ++.++.+|++|.+++.++++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence 789999999999999999999999999999997643 2222221111122 6778899999999998888654
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecCCCCCC----------C
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLS----------H 160 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS~~~~~----------~ 160 (272)
++|+||||||..... .+.++++..+++|+.++.++++++.+...+ .+.++||++||...+. +
T Consensus 106 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~ 178 (381)
T 1n7h_A 106 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 178 (381)
T ss_dssp ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence 589999999964221 234568899999999999999999987644 2346999999976543 2
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccC---CeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcC----------CCCCC
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKD---NIRTNSVAPWYTKTSLVERLLENKEFVDKVIART----------PLQRV 227 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~---~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~----------~~~~~ 227 (272)
..+...|+.+|++.+.+++.++.+++-. ...++.+.||...+.....+ ........... ....+
T Consensus 179 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~---~~~~~~~~~g~~~~~~~g~~~~~~~~ 255 (381)
T 1n7h_A 179 FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI---TRALGRIKVGLQTKLFLGNLQASRDW 255 (381)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHH---HHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHH---HHHHHHHHcCCCCeEEeCCCCceeee
Confidence 3456789999999999999999887321 11223444554333211111 11112221111 11245
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..++|+++++++++.... ++.+++.+|..+.
T Consensus 256 v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s 286 (381)
T 1n7h_A 256 GFAGDYVEAMWLMLQQEK----PDDYVVATEEGHT 286 (381)
T ss_dssp EEHHHHHHHHHHHHTSSS----CCEEEECCSCEEE
T ss_pred EEHHHHHHHHHHHHhCCC----CCeEEeeCCCCCc
Confidence 679999999999986432 5788998886443
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=181.36 Aligned_cols=195 Identities=18% Similarity=0.093 Sum_probs=152.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEeeCChHH------------HHHHHHHHHhCCCeEEEEEecCCCHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELA-GLGAVVHTCSRNEVE------------LNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~-~~G~~v~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~ 80 (272)
.+.+|++|||||++|||++++..|+ +.|+.++++.+..+. ...+.+++++.+.+...+.||+++.++
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~ 126 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI 126 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence 4678999999999999999999998 679999888775432 345566777788999999999999999
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCCCCC-------------C---------------------CCCCCHHHHHHHHHH-
Q 024125 81 REKLIQEVGSKFNGKLNILVNNVGTNIRK-------------P---------------------TIEYSAEEYSKIMTT- 125 (272)
Q Consensus 81 ~~~~~~~~~~~~~~~id~li~~ag~~~~~-------------~---------------------~~~~~~~~~~~~~~~- 125 (272)
++++++++.+.+ |++|+|||+++..... + +...+.++++.+..+
T Consensus 127 i~~vi~~i~~~~-G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM 205 (401)
T 4ggo_A 127 KAQVIEEAKKKG-IKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM 205 (401)
T ss_dssp HHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence 999999999999 7999999999964221 1 112345666655555
Q ss_pred --HhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC--CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCccc
Q 024125 126 --NFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (272)
Q Consensus 126 --N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~ 201 (272)
..+..+...+...+.|.+ +++++.+|++.+....| +...++++|++|+..++.|+.+|+ +++++++.||.+.
T Consensus 206 g~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~v 281 (401)
T 4ggo_A 206 GGEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGLV 281 (401)
T ss_dssp SSHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCCC
T ss_pred hhhHHHHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCccc
Confidence 455566666666666643 38999999988765444 445899999999999999999997 4899999999999
Q ss_pred ChhhHhhhhCHH
Q 024125 202 TSLVERLLENKE 213 (272)
Q Consensus 202 t~~~~~~~~~~~ 213 (272)
|.....+..-+-
T Consensus 282 T~AssaIP~~pl 293 (401)
T 4ggo_A 282 TRASAVIPVIPL 293 (401)
T ss_dssp CTTGGGSSSHHH
T ss_pred cchhhcCCCchH
Confidence 988776644333
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=177.12 Aligned_cols=225 Identities=14% Similarity=0.156 Sum_probs=158.6
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLG-------AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREK 83 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 83 (272)
....+++++||||||+|+||++++++|+++| ++|++++|+.+.... ....++.++.+|++|.+++++
T Consensus 8 ~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~ 81 (342)
T 2hrz_A 8 ENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEK 81 (342)
T ss_dssp CCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHH
T ss_pred CCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHH
Confidence 4456789999999999999999999999999 799999987643211 123578888999999998887
Q ss_pred HHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCCCC-
Q 024125 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHV- 161 (272)
Q Consensus 84 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~~~- 161 (272)
+++ +++|+||||||... ..+.+++++.+++|+.++.++++++.+...+. +.++||++||...+...
T Consensus 82 ~~~-------~~~d~vih~A~~~~-----~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~ 149 (342)
T 2hrz_A 82 LVE-------ARPDVIFHLAAIVS-----GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPL 149 (342)
T ss_dssp HHH-------TCCSEEEECCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSC
T ss_pred HHh-------cCCCEEEECCccCc-----ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCC
Confidence 774 36999999999632 12346788999999999999999987654322 24799999998765432
Q ss_pred C----------CChhhHHHHHHHHHHHHHHHHHHc--cCCeeEEEee--CCcccChhhHhhhhCHHHHHHHHhcC----C
Q 024125 162 G----------SGSIYGATKAAMNQLTRNLACEWA--KDNIRTNSVA--PWYTKTSLVERLLENKEFVDKVIART----P 223 (272)
Q Consensus 162 ~----------~~~~Y~~sK~a~~~~~~~la~el~--~~~i~v~~v~--PG~v~t~~~~~~~~~~~~~~~~~~~~----~ 223 (272)
+ +...|+.+|++.+.+++.++.+.. ...+|++.+. ||...+....-+ ........... +
T Consensus 150 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~---~~~~~~~~~~~~~~~~ 226 (342)
T 2hrz_A 150 PYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFF---SNILREPLVGQEAVLP 226 (342)
T ss_dssp CSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHH---HHHHHHHHTTCCEEEC
T ss_pred CCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHH---HHHHHHHhcCCCeecc
Confidence 1 567899999999999999887631 2236666666 887655431111 11222222222 1
Q ss_pred CCC-----CCCHHHHHHHHHHHhcCCCC-CccccEEEeC
Q 024125 224 LQR-----VGEPEEVASLVAYLCLPAAS-YITGQIISVD 256 (272)
Q Consensus 224 ~~~-----~~~~~e~a~~~~~l~~~~~~-~~~G~~i~~d 256 (272)
... +..++|+++.++.++..... ...|+.+++.
T Consensus 227 ~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~ 265 (342)
T 2hrz_A 227 VPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP 265 (342)
T ss_dssp SCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred CCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC
Confidence 111 35799999999988753211 1136788874
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-23 Score=217.54 Aligned_cols=177 Identities=20% Similarity=0.205 Sum_probs=139.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHH---HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVE---LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+|++|||||++|||+++++.|+++|++ |++++|+..+ ..+..+++...+.++.++.+|++|.++++++++++.+
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence 6899999999999999999999999996 8888987543 3455566666678899999999999999999999874
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|+||||||+....++.+.+.++|++.+++|+.|++++.+.+.+.|.+. ++||++||.++..+.++...|+++|
T Consensus 1962 ~-g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~aaK 2038 (2512)
T 2vz8_A 1962 L-GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFAN 2038 (2512)
T ss_dssp H-SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHHHH
T ss_pred c-CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHHHH
Confidence 6 689999999999877888899999999999999999999999999988654 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYT 200 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v 200 (272)
+++++|++..+.+ |+...++.+|.+
T Consensus 2039 aal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2039 SAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp HHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred HHHHHHHHHHHHC----CCcEEEEEccCc
Confidence 9999999976655 666666666543
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.3e-24 Score=174.02 Aligned_cols=208 Identities=13% Similarity=0.052 Sum_probs=152.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++||||||+|+||++++++|+++|++|++++|+.++.+.. ...+.++.+|++|.+++++++ ..+|
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~--------~~~d 69 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVC--------KGAD 69 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHH--------TTCS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHh--------cCCC
Confidence 7899999999999999999999999999999997664322 246888999999999988877 3699
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC----------CCChhh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV----------GSGSIY 167 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~----------~~~~~Y 167 (272)
+||||||..... ...+++|+.++.++++++ ++.+.+++|++||....... .+...|
T Consensus 70 ~vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y 135 (227)
T 3dhn_A 70 AVISAFNPGWNN----------PDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL 135 (227)
T ss_dssp EEEECCCC----------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred EEEEeCcCCCCC----------hhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence 999999863111 126788999988888776 44556799999998765433 346789
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHh--hhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER--LLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
+.+|.+.+.+.+.+++ ..+++++.++||.+.++.... +...... .........+..++|+|++++.++..
T Consensus 136 ~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~---~~~~~~~~~~i~~~Dva~ai~~~l~~-- 207 (227)
T 3dhn_A 136 PGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLGKDD---MIVDIVGNSHISVEDYAAAMIDELEH-- 207 (227)
T ss_dssp HHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEESSB---CCCCTTSCCEEEHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeecCCC---cccCCCCCcEEeHHHHHHHHHHHHhC--
Confidence 9999999998887765 358999999999987654321 0000000 00000113356899999999999964
Q ss_pred CCccccEEEeCCCcCCC
Q 024125 246 SYITGQIISVDGGFTAN 262 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~ 262 (272)
....|+.+.+.+....+
T Consensus 208 ~~~~g~~~~~~~~~~~~ 224 (227)
T 3dhn_A 208 PKHHQERFTIGYLEHHH 224 (227)
T ss_dssp CCCCSEEEEEECCSCCC
T ss_pred ccccCcEEEEEeehhcc
Confidence 34569999988775543
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-22 Score=175.23 Aligned_cols=227 Identities=14% Similarity=0.049 Sum_probs=150.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH-HHHHHHHh----CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-KCLKEWQS----KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+.. .+.++.++.+|++|.+++.++++.+
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--- 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence 478999999999999999999999999999999765421 11112211 1346788899999999998888754
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----------- 160 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~----------- 160 (272)
++|+||||||..... .+.++++..+++|+.++.++++++.+...+ +.++||++||...+..
T Consensus 78 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~ 149 (372)
T 1db3_A 78 ---QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTP 149 (372)
T ss_dssp ---CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCC
Confidence 589999999974332 233456789999999999999998665422 2379999999765432
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHh-hhh--CHHHHHHHHhcC-C---------CCCC
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER-LLE--NKEFVDKVIART-P---------LQRV 227 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~-~~~--~~~~~~~~~~~~-~---------~~~~ 227 (272)
..+...|+.+|++.+.+++.++.++ ++.+..+.|..+..+.... +.. ............ + ...+
T Consensus 150 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 226 (372)
T 1db3_A 150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW 226 (372)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeee
Confidence 2346789999999999999999886 4555555554333221100 000 011222222221 1 1235
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
..++|++++++.++.... ++.+++.+|..+
T Consensus 227 i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~ 256 (372)
T 1db3_A 227 GHAKDYVKMQWMMLQQEQ----PEDFVIATGVQY 256 (372)
T ss_dssp EEHHHHHHHHHHTTSSSS----CCCEEECCCCCE
T ss_pred eEHHHHHHHHHHHHhcCC----CceEEEcCCCce
Confidence 679999999998875321 467888777544
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=177.24 Aligned_cols=217 Identities=13% Similarity=0.123 Sum_probs=156.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCH-HHHHHHHHHHHHHcCCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVGSKFNGK 95 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 95 (272)
|+||||||+|+||++++++|+++ |++|++++|+.+..+.+. ...++.++.+|++|. +.++++++ .
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--------~ 67 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------K 67 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH--------H
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc--------C
Confidence 57999999999999999999998 899999999876543221 123677889999984 55655553 4
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC-------------
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG------------- 162 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~------------- 162 (272)
+|+||||||...+.. ..++++..+++|+.++.++++++. +.+ +++|++||...+....
T Consensus 68 ~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~ 138 (345)
T 2bll_A 68 CDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV 138 (345)
T ss_dssp CSEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred CCEEEEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHHH----HhC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence 899999999643211 134567899999999999888874 344 7999999975432211
Q ss_pred -----CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-----h---CHHHHHHHHhcCCC-----
Q 024125 163 -----SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-----E---NKEFVDKVIARTPL----- 224 (272)
Q Consensus 163 -----~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-----~---~~~~~~~~~~~~~~----- 224 (272)
+...|+.+|.+.+.+++.++++. +++++.++||.+.++...... . ...+........+.
T Consensus 139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (345)
T 2bll_A 139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG 215 (345)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECC
Confidence 12379999999999999998876 799999999998776532100 0 01222223222221
Q ss_pred ----CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 225 ----QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 225 ----~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
..+..++|++++++.++.......+|+.+++.+|.
T Consensus 216 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~ 254 (345)
T 2bll_A 216 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE 254 (345)
T ss_dssp SCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred CCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence 23568999999999998754444679999999874
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-23 Score=181.85 Aligned_cols=224 Identities=13% Similarity=0.141 Sum_probs=162.0
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCC-CHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA-SPDQREKLIQEVG 89 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~ 89 (272)
...+++|+||||||+|+||++++++|+++ |++|++++|+.+....+.+ ..++.++.+|++ +.+++.++++
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~--- 90 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK--- 90 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH---
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc---
Confidence 34467899999999999999999999998 9999999998765443321 246888999999 9998888774
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC--------
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-------- 161 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-------- 161 (272)
++|+|||+|+...... ..++..+.+++|+.++.++++++.. .+ .++|++||...+...
T Consensus 91 -----~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~v~~SS~~vyg~~~~~~~~e~ 156 (372)
T 3slg_A 91 -----KCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCADEQFDPD 156 (372)
T ss_dssp -----HCSEEEECBCCCCHHH----HHHCHHHHHHHHTTTTHHHHHHHHH----HT-CEEEEECCGGGGBSCCCSSBCTT
T ss_pred -----cCCEEEEcCccccHHH----HhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEeCcHHHhCCCCCCCCCcc
Confidence 4899999999743211 2345678899999999988888743 34 799999996543221
Q ss_pred ----------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--------CHHHHHHHHhcCC
Q 024125 162 ----------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--------NKEFVDKVIARTP 223 (272)
Q Consensus 162 ----------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~ 223 (272)
.+...|+.+|.+.+.+++.++.+ +++++.++|+.+..+....... ...+........+
T Consensus 157 ~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (372)
T 3slg_A 157 ASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEN 232 (372)
T ss_dssp TCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCC
T ss_pred ccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCC
Confidence 23347999999999999988765 8999999999887665321000 0122333333222
Q ss_pred C---------CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCC-CcCC
Q 024125 224 L---------QRVGEPEEVASLVAYLCLPAASYITGQIISVDG-GFTA 261 (272)
Q Consensus 224 ~---------~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dg-G~~~ 261 (272)
. ..+..++|++++++.++........|+.+++.+ |..+
T Consensus 233 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~ 280 (372)
T 3slg_A 233 ISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNF 280 (372)
T ss_dssp EEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEE
T ss_pred cEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCc
Confidence 1 135579999999999997654446799999998 5443
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-22 Score=171.62 Aligned_cols=210 Identities=15% Similarity=0.122 Sum_probs=155.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.|+||||||+|+||++++++|+++|++|++++|+....+ .+ .+.++.+|++ .+++.+++ .++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-------~~~~~~~Dl~-~~~~~~~~--------~~~ 63 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-------DYEYRVSDYT-LEDLINQL--------NDV 63 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHT--------TTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-------ceEEEEcccc-HHHHHHhh--------cCC
Confidence 479999999999999999999999999999999843322 21 5678899999 88877766 479
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCCh
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGS 165 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~~ 165 (272)
|+|||+|+..... +.+..+++|+.++.++++++ ++.+..++|++||...+.. ..+..
T Consensus 64 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~ 131 (311)
T 3m2p_A 64 DAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSDETSLPWNEKELPLPDL 131 (311)
T ss_dssp SEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred CEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence 9999999975433 33567889999999888877 4456678999999655432 22457
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC---------CCCCCHHHHHHH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL---------QRVGEPEEVASL 236 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~e~a~~ 236 (272)
.|+.+|.+.+.+++.++.+ .+++++.+.|+.+.++........+.+........+. ..+..++|++++
T Consensus 132 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a 208 (311)
T 3m2p_A 132 MYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKS 208 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHH
Confidence 8999999999999998886 4899999999988776543110012233333333221 134568899999
Q ss_pred HHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 237 VAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+..++.... .|+.+++.+|..+.
T Consensus 209 ~~~~~~~~~---~~~~~~i~~~~~~s 231 (311)
T 3m2p_A 209 VIYALKQEK---VSGTFNIGSGDALT 231 (311)
T ss_dssp HHHHTTCTT---CCEEEEECCSCEEC
T ss_pred HHHHHhcCC---CCCeEEeCCCCccc
Confidence 999986543 69999999886554
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=175.20 Aligned_cols=211 Identities=14% Similarity=0.084 Sum_probs=124.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|+||||||+|+||++++++|+++|++|++++|+.+. . . ++.+|++|.+++.++++.. ++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~----~--~~~~Dl~d~~~~~~~~~~~------~~ 61 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------P----K--FEQVNLLDSNAVHHIIHDF------QP 61 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH------CC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------C----C--eEEecCCCHHHHHHHHHhh------CC
Confidence 6899999999999999999999999999999986543 0 1 5678999999888887653 59
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC----------CCCChh
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----------VGSGSI 166 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~----------~~~~~~ 166 (272)
|+||||||..... .+.+++++.+++|+.++.++++++.+ .+ +++|++||...+.+ ..+...
T Consensus 62 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~ 132 (315)
T 2ydy_A 62 HVIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIPAPLNL 132 (315)
T ss_dssp SEEEECC-----------------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred CEEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence 9999999964322 24567889999999999999999865 23 49999999876543 345678
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHH-hc-------CCCCCCCCHHHHHHHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVI-AR-------TPLQRVGEPEEVASLVA 238 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~e~a~~~~ 238 (272)
|+.+|++.+.+++.++.++ ..+|++.+. |...++.. .+. ........ .. .+...+..++|+|++++
T Consensus 133 Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 206 (315)
T 2ydy_A 133 YGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEE-SAV--TVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCR 206 (315)
T ss_dssp HHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGG-STT--GGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccc-cHH--HHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHH
Confidence 9999999999998874322 124444443 44333110 111 01111111 11 22345678999999999
Q ss_pred HHhcCC-CCCccccEEEeCCCcCCC
Q 024125 239 YLCLPA-ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 239 ~l~~~~-~~~~~G~~i~~dgG~~~~ 262 (272)
+++... .....|+.+++.+|..++
T Consensus 207 ~~~~~~~~~~~~~~~~~i~~~~~~s 231 (315)
T 2ydy_A 207 QLAEKRMLDPSIKGTFHWSGNEQMT 231 (315)
T ss_dssp HHHHHHHTCTTCCEEEECCCSCCBC
T ss_pred HHHHhhccccCCCCeEEEcCCCccc
Confidence 988632 123568999999987654
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=174.53 Aligned_cols=217 Identities=16% Similarity=0.142 Sum_probs=143.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHH--HHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKC--LKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
||+||||||+|+||++++++|+++|++|+++.| +.+..... ..++.....++.++.+|++|.+++++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------- 72 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAI-------- 72 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHH--------
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHH--------
Confidence 689999999999999999999999999999888 54321111 1111100125677889999999887776
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC----------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEE-YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG---------- 162 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~---------- 162 (272)
..+|+|||||+.. ..+.++ +++.+++|+.++.++++++.+. .+.++||++||..+....+
T Consensus 73 ~~~d~vih~A~~~------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~~ 143 (322)
T 2p4h_X 73 EGCVGIFHTASPI------DFAVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDESD 143 (322)
T ss_dssp TTCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTTC
T ss_pred cCCCEEEEcCCcc------cCCCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCcc
Confidence 3589999999632 112222 3568999999999999988442 1457999999976432211
Q ss_pred ------------CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH-HHHHHHHhc----CCCC
Q 024125 163 ------------SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK-EFVDKVIAR----TPLQ 225 (272)
Q Consensus 163 ------------~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~----~~~~ 225 (272)
....|+.||.+.+.+++.++.+ .|+++++++||.+.+++........ ......... .+..
T Consensus 144 ~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 220 (322)
T 2p4h_X 144 WSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVT 220 (322)
T ss_dssp CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEE
T ss_pred ccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCC
Confidence 1116999999888887766554 4899999999999988643211100 001011111 1111
Q ss_pred --CCCCHHHHHHHHHHHhcCCCCCccccEEEeC
Q 024125 226 --RVGEPEEVASLVAYLCLPAASYITGQIISVD 256 (272)
Q Consensus 226 --~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~d 256 (272)
.+..++|+|+++++++... ..+|+ +++.
T Consensus 221 ~~~~i~v~Dva~a~~~~~~~~--~~~g~-~~~~ 250 (322)
T 2p4h_X 221 RFHMVHVDDVARAHIYLLENS--VPGGR-YNCS 250 (322)
T ss_dssp EEEEEEHHHHHHHHHHHHHSC--CCCEE-EECC
T ss_pred CcCEEEHHHHHHHHHHHhhCc--CCCCC-EEEc
Confidence 3678999999999998542 25677 4443
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-22 Score=173.30 Aligned_cols=225 Identities=15% Similarity=0.040 Sum_probs=155.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH-HHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.+++||||||+|+||++++++|+++|++|++++|+.+... ...+.+. ....+.++.+|++|.++++++++.+
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------ 85 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------ 85 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc------
Confidence 5789999999999999999999999999999999764321 1111111 1235778899999999998888654
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCC-----------C
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHV-----------G 162 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~-----------~ 162 (272)
++|+|||||+..... .+.++++..+++|+.++.++++++.+. + .++||++||...+... .
T Consensus 86 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~ 157 (335)
T 1rpn_A 86 QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFY 157 (335)
T ss_dssp CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred CCCEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence 589999999963211 112346789999999999999988542 4 2799999997654322 2
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHh-hhh--CHHHHHHHHhcC-C---------CCCCCC
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER-LLE--NKEFVDKVIART-P---------LQRVGE 229 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~-~~~--~~~~~~~~~~~~-~---------~~~~~~ 229 (272)
+...|+.+|++.+.+++.++.++ ++.+..+.|+.+..+.... +.. ............ + ...+..
T Consensus 158 p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~ 234 (335)
T 1rpn_A 158 PRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGF 234 (335)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEE
T ss_pred CCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEE
Confidence 34689999999999999998876 6778888887765543211 000 011222222221 1 112456
Q ss_pred HHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 230 PEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 230 ~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++|++++++.++.... ++.+++.+|..++
T Consensus 235 v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s 263 (335)
T 1rpn_A 235 AGDYVEAMWLMLQQDK----ADDYVVATGVTTT 263 (335)
T ss_dssp HHHHHHHHHHHHHSSS----CCCEEECCSCEEE
T ss_pred HHHHHHHHHHHHhcCC----CCEEEEeCCCCcc
Confidence 8999999999886432 4678888775443
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=8e-22 Score=174.10 Aligned_cols=227 Identities=17% Similarity=0.039 Sum_probs=154.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
|+||||||+|+||++++++|+++|++|++++|+.+. ++.+.+.+.. ...++.++.+|++|.+++.++++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence 689999999999999999999999999999987542 2222111110 1236778899999999998888754
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----------- 160 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~----------- 160 (272)
++|+||||||..... .+.++++..+++|+.++.++++++.+... .+.++||++||...+..
T Consensus 102 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~~~ 173 (375)
T 1t2a_A 102 ---KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTP 173 (375)
T ss_dssp ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred ---CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCccCC
Confidence 589999999963211 13456788999999999999999866432 12279999999765432
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH-hhhh--CHHHHHHHHhcC-C---------CCCC
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE-RLLE--NKEFVDKVIART-P---------LQRV 227 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~-~~~~--~~~~~~~~~~~~-~---------~~~~ 227 (272)
..+...|+.+|++.+.+++.++.++ ++.+..+.|+.+..+... .+.. -........... + ...+
T Consensus 174 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 250 (375)
T 1t2a_A 174 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW 250 (375)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeee
Confidence 2345789999999999999999886 677777777654433211 0000 011122222211 1 1235
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..++|++++++.++.... ++.+++.+|..+.
T Consensus 251 i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s 281 (375)
T 1t2a_A 251 GHAKDYVEAMWLMLQNDE----PEDFVIATGEVHS 281 (375)
T ss_dssp EEHHHHHHHHHHHHHSSS----CCCEEECCSCCEE
T ss_pred EEHHHHHHHHHHHHhcCC----CceEEEeCCCccc
Confidence 679999999998885432 3677777775443
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-22 Score=173.29 Aligned_cols=222 Identities=12% Similarity=0.094 Sum_probs=157.3
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|+||||||+|+||++++++|+++|++|++++|+..... +.+ ..++.++.+|++|.+++++++++ .++|
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~------~~~d 69 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI---TEGAKFYNGDLRDKAFLRDVFTQ------ENIE 69 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS---CTTSEEEECCTTCHHHHHHHHHH------SCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc---CCCcEEEECCCCCHHHHHHHHhh------cCCC
Confidence 68999999999999999999999999999998654321 111 12567789999999998888764 3799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~~~ 166 (272)
+|||+|+..... .+.+++++.+++|+.++.++++++ ++.+.+++|++||...+.. ..+...
T Consensus 70 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~ 141 (330)
T 2c20_A 70 AVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT 141 (330)
T ss_dssp EEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred EEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence 999999964221 134567889999999999998876 4455679999999765432 234578
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-------hC--HHHHHHHHhcCC------------C-
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-------EN--KEFVDKVIARTP------------L- 224 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-------~~--~~~~~~~~~~~~------------~- 224 (272)
|+.+|.+.+.+++.++.++ +++++.++|+.+.++...... .. +..........+ .
T Consensus 142 Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 218 (330)
T 2c20_A 142 YGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG 218 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence 9999999999999998764 899999999988765321100 00 111111111111 1
Q ss_pred ---CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 225 ---QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 225 ---~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..+..++|++++++.++........|+.+++.+|..+.
T Consensus 219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s 259 (330)
T 2c20_A 219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFS 259 (330)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBC
T ss_pred ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCcc
Confidence 12456899999999887532222237889998876544
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.2e-23 Score=179.32 Aligned_cols=221 Identities=12% Similarity=0.150 Sum_probs=154.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++++|+||||||+|+||++++++|+++| ++|++++|+..... .+.+. .+. +.+|+++.+.++++++. ..+
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~~~ 113 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--EEF 113 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--CCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--ccc
Confidence 4678999999999999999999999999 89999998764321 01111 111 56899988888777642 112
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC----------
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG---------- 162 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~---------- 162 (272)
+++|+|||||+.... +.+++++.+++|+.++.++++++.+ .+. +||++||...+....
T Consensus 114 -~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~~ 181 (357)
T 2x6t_A 114 -GDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYE 181 (357)
T ss_dssp -SSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGGC
T ss_pred -CCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCCC
Confidence 479999999997433 1234678999999999999998855 344 999999986544322
Q ss_pred -CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhh--hhC--HHHHHHHHhcCC----------CCCC
Q 024125 163 -SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERL--LEN--KEFVDKVIARTP----------LQRV 227 (272)
Q Consensus 163 -~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~--~~~--~~~~~~~~~~~~----------~~~~ 227 (272)
+...|+.+|.+.+.+++.++.+ .+++++.++||.+.++..... ... ..+........+ ...+
T Consensus 182 ~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (357)
T 2x6t_A 182 KPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF 258 (357)
T ss_dssp CCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECE
T ss_pred CCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEcc
Confidence 2568999999999999998766 389999999999887653210 000 122233322221 2245
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 228 GEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..++|+|+++++++.... |+.+++.+|..+.
T Consensus 259 i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~s 289 (357)
T 2x6t_A 259 VYVGDVADVNLWFLENGV----SGIFNLGTGRAES 289 (357)
T ss_dssp EEHHHHHHHHHHHHHHCC----CEEEEESCSCCEE
T ss_pred EEHHHHHHHHHHHHhcCC----CCeEEecCCCccc
Confidence 689999999999986432 8899999886544
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=159.85 Aligned_cols=203 Identities=14% Similarity=0.101 Sum_probs=133.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++||||||+|+||++++++|+++|++|++++|+.++.+++. ..+.++.+|++|.++ +.+ ..+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~~~--------~~~d 63 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--SDL--------SDQN 63 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--HHH--------TTCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh--hhh--------cCCC
Confidence 46999999999999999999999999999999987755432 356788999998876 222 5799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC------------CCh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG------------SGS 165 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~------------~~~ 165 (272)
+||||||.... ...+|+.++ +.+++.+++.+.+++|++||..+..+.+ +..
T Consensus 64 ~vi~~ag~~~~-------------~~~~~~~~~----~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~ 126 (221)
T 3ew7_A 64 VVVDAYGISPD-------------EAEKHVTSL----DHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAP 126 (221)
T ss_dssp EEEECCCSSTT-------------TTTSHHHHH----HHHHHHHCSCCSSEEEEECCCC-------------------CC
T ss_pred EEEECCcCCcc-------------ccchHHHHH----HHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHH
Confidence 99999997321 123355554 4555566777778999999987654332 245
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhh--HhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV--ERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
.|+.+|.+.+.+. .+.. ...+++++.++||.+.++.. ..+..... ..........+.+++|+|++++.++..
T Consensus 127 ~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~---~~~~~~~~~~~i~~~Dva~~~~~~l~~ 200 (221)
T 3ew7_A 127 YYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKD---HLLFGSDGNSFISMEDYAIAVLDEIER 200 (221)
T ss_dssp CSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC------------------------CCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccc---cceecCCCCceEeHHHHHHHHHHHHhC
Confidence 6999999998863 2221 15689999999999987621 11110000 000011123467899999999999964
Q ss_pred CCCCccccEEEeCCCcCCC
Q 024125 244 AASYITGQIISVDGGFTAN 262 (272)
Q Consensus 244 ~~~~~~G~~i~~dgG~~~~ 262 (272)
. ...|+.+++.+-...+
T Consensus 201 ~--~~~g~~~~~~~~~~~~ 217 (221)
T 3ew7_A 201 P--NHLNEHFTVAGKLEHH 217 (221)
T ss_dssp C--SCTTSEEECCC-----
T ss_pred c--cccCCEEEECCCCccc
Confidence 3 3559999988765443
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=170.66 Aligned_cols=226 Identities=16% Similarity=0.135 Sum_probs=149.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+++|||||+|+||++++++|+++|++|++++|......+..+.+.. .+.++.++.+|++|.++++++++. .++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~ 74 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAI 74 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc------cCC
Confidence 3799999999999999999999999999987642211111122221 134567789999999998888764 259
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------C-CCC
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------V-GSG 164 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~-~~~ 164 (272)
|+||||||...... ..++.++.+++|+.++.++++++ ++.+.++||++||...+.. . ++.
T Consensus 75 D~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~ 146 (338)
T 1udb_A 75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQ 146 (338)
T ss_dssp SEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred CEEEECCccCcccc----chhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCC
Confidence 99999999632211 23456778999999999988865 4445579999999765421 1 236
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhh------------HhhhhCHHHHHHHH-hcCC--------
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV------------ERLLENKEFVDKVI-ARTP-------- 223 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~------------~~~~~~~~~~~~~~-~~~~-------- 223 (272)
..|+.||++++.+++.++.+. .++++..+.|+.+..+.. ..+. +....... ...+
T Consensus 147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~ 222 (338)
T 1udb_A 147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLM--PYIAQVAVGRRDSLAIFGNDY 222 (338)
T ss_dssp SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHH--HHHHHHHHTSSSCEEEECSCS
T ss_pred ChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHH--HHHHHHHHhcCCCcEEecCcc
Confidence 789999999999999999884 368888888754432210 0000 11111111 1110
Q ss_pred -------CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 224 -------LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 224 -------~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
...+..++|++++++.++........++.+++.+|..+
T Consensus 223 ~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~ 267 (338)
T 1udb_A 223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN 267 (338)
T ss_dssp SSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCE
T ss_pred cCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCce
Confidence 11345789999999877742111122478888777543
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-22 Score=164.93 Aligned_cols=199 Identities=17% Similarity=0.099 Sum_probs=139.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++||||||+|+||++++++|+++|++|++++|+.++..++. ...+.++.+|++|.++ +. + ..+|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~--~~-------~-~~~d 64 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTE--AD-------L-DSVD 64 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCH--HH-------H-TTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccH--hh-------c-ccCC
Confidence 36999999999999999999999999999999987765432 2356788999999877 22 2 5799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC--------------
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-------------- 163 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~-------------- 163 (272)
+||||||...... ...+|+.++. .+++.+++.+ +++|++||..+....+.
T Consensus 65 ~vi~~ag~~~~~~-----------~~~~n~~~~~----~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
T 3h2s_A 65 AVVDALSVPWGSG-----------RGYLHLDFAT----HLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS 128 (224)
T ss_dssp EEEECCCCCTTSS-----------CTHHHHHHHH----HHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG
T ss_pred EEEECCccCCCcc-----------hhhHHHHHHH----HHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc
Confidence 9999999752111 1245777764 4555557777 99999999766544333
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHh-hhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER-LLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
...|+.+|++.+.+ .......+++++.++||++.++.... +...... .........+.+++|+|++++.++.
T Consensus 129 ~~~y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~---~~~~~~~~~~i~~~DvA~~~~~~l~ 201 (224)
T 3h2s_A 129 QPWYDGALYQYYEY----QFLQMNANVNWIGISPSEAFPSGPATSYVAGKDT---LLVGEDGQSHITTGNMALAILDQLE 201 (224)
T ss_dssp STTHHHHHHHHHHH----HHHTTCTTSCEEEEEECSBCCCCCCCCEEEESSB---CCCCTTSCCBCCHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHH----HHHHhcCCCcEEEEcCccccCCCcccCceecccc---cccCCCCCceEeHHHHHHHHHHHhc
Confidence 57899999998854 22224669999999999998762110 1000000 0001122356789999999999996
Q ss_pred CCCCCccccEEEeCC
Q 024125 243 PAASYITGQIISVDG 257 (272)
Q Consensus 243 ~~~~~~~G~~i~~dg 257 (272)
.. ...|+.+.+.+
T Consensus 202 ~~--~~~g~~~~~~~ 214 (224)
T 3h2s_A 202 HP--TAIRDRIVVRD 214 (224)
T ss_dssp SC--CCTTSEEEEEE
T ss_pred Cc--cccCCEEEEec
Confidence 43 34588888754
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-22 Score=187.35 Aligned_cols=220 Identities=12% Similarity=0.111 Sum_probs=160.4
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHH-HHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ-REKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 92 (272)
+++|+||||||+|+||++++++|+++ |++|++++|+.+..+++. ...++.++.+|+++.++ ++++++
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~------ 381 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------ 381 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc------
Confidence 57899999999999999999999998 899999999875533221 12467788999998764 544442
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC-----------
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV----------- 161 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~----------- 161 (272)
++|+|||||+..... ...+++++.+++|+.++.++++++.+ .+ +++|++||...+...
T Consensus 382 --~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~~ 450 (660)
T 1z7e_A 382 --KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSN 450 (660)
T ss_dssp --HCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTCC
T ss_pred --CCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCccc
Confidence 589999999964321 12345678999999999998888743 44 799999997654221
Q ss_pred -------CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh------h--CHHHHHHHHhcCCC--
Q 024125 162 -------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL------E--NKEFVDKVIARTPL-- 224 (272)
Q Consensus 162 -------~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~------~--~~~~~~~~~~~~~~-- 224 (272)
.+...|+.+|.+.+.+++.++.+. +++++.++||.+.++...... . ...+........+.
T Consensus 451 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 527 (660)
T 1z7e_A 451 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL 527 (660)
T ss_dssp EEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEE
T ss_pred cccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEE
Confidence 123479999999999999998876 799999999999877542110 0 01233333333322
Q ss_pred -------CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 225 -------QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 225 -------~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
..+..++|++++++.++.......+|+++++++|.
T Consensus 528 ~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~ 569 (660)
T 1z7e_A 528 IDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE 569 (660)
T ss_dssp EGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred eCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence 13567999999999998755445679999999884
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.9e-22 Score=169.51 Aligned_cols=197 Identities=17% Similarity=0.160 Sum_probs=146.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
..++||||||+|+||++++++|+++|++|++++|+ .+|++|.+++.++++.. +
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~------~ 63 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK------K 63 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH------C
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc------C
Confidence 45899999999999999999999999999999986 27999999988888653 6
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC-----------CC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-----------SG 164 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~-----------~~ 164 (272)
+|+||||||.... +.+.+++++.+++|+.++.++++++.+ .+. +||++||...+.+.. +.
T Consensus 64 ~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~ 134 (292)
T 1vl0_A 64 PNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDGEAKEPITEFDEVNPQ 134 (292)
T ss_dssp CSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred CCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECCCCCCCCCCCCCCCCc
Confidence 9999999996321 123456789999999999999998855 243 999999976543322 45
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcC-------CCCCCCCHHHHHHHH
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIART-------PLQRVGEPEEVASLV 237 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~e~a~~~ 237 (272)
..|+.+|.+.+.+++.++. .+..++|+.+.++ ...+. ........... ....+..++|+|+++
T Consensus 135 ~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 204 (292)
T 1vl0_A 135 SAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFV--KTMINLGKTHDELKVVHDQVGTPTSTVDLARVV 204 (292)
T ss_dssp SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHH--HHHHHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChH--HHHHHHHhcCCcEEeecCeeeCCccHHHHHHHH
Confidence 7899999999999987643 3677788777644 11111 11222222221 124456799999999
Q ss_pred HHHhcCCCCCccccEEEeCCCcCCC
Q 024125 238 AYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++++... .|+.+++.+|..+.
T Consensus 205 ~~~~~~~----~~~~~~i~~~~~~s 225 (292)
T 1vl0_A 205 LKVIDEK----NYGTFHCTCKGICS 225 (292)
T ss_dssp HHHHHHT----CCEEEECCCBSCEE
T ss_pred HHHHhcC----CCcEEEecCCCCcc
Confidence 9998643 68999999986544
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-21 Score=166.68 Aligned_cols=215 Identities=13% Similarity=0.096 Sum_probs=152.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+|++|||||+|+||++++++|+++ |++|++++|+....+ . .. ++.++.+|++|.+++++++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~----~~---~~~~~~~D~~d~~~~~~~~~~~------ 67 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V----VN---SGPFEVVNALDFNQIEHLVEVH------ 67 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H----HH---SSCEEECCTTCHHHHHHHHHHT------
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c----cC---CCceEEecCCCHHHHHHHHhhc------
Confidence 578999999999999999999998 899999998765421 1 11 3456789999999988887642
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC------------CC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------VG 162 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~------------~~ 162 (272)
++|+|||+|+.... ...+++++.+++|+.++.++++++ ++.+.+++|++||...+.. ..
T Consensus 68 ~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~ 138 (312)
T 2yy7_A 68 KITDIYLMAALLSA-----TAEKNPAFAWDLNMNSLFHVLNLA----KAKKIKKIFWPSSIAVFGPTTPKENTPQYTIME 138 (312)
T ss_dssp TCCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHH----HTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred CCCEEEECCccCCC-----chhhChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence 69999999996321 123557789999999999998887 4455579999999765432 12
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-----hCHHHHHHHHhcC--------CCCCCCC
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-----ENKEFVDKVIART--------PLQRVGE 229 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~--------~~~~~~~ 229 (272)
+...|+.+|.+.+.+++.++.++ +++++.++|+.+..+...... ....+........ ....+..
T Consensus 139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 215 (312)
T 2yy7_A 139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMY 215 (312)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEE
T ss_pred CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeee
Confidence 35789999999999999998876 799999999988764311000 0011111111111 1112356
Q ss_pred HHHHHHHHHHHhcCCCCCc-cccEEEeCC
Q 024125 230 PEEVASLVAYLCLPAASYI-TGQIISVDG 257 (272)
Q Consensus 230 ~~e~a~~~~~l~~~~~~~~-~G~~i~~dg 257 (272)
++|++++++.++....... .|+.+++.+
T Consensus 216 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~ 244 (312)
T 2yy7_A 216 MDDAIDATINIMKAPVEKIKIHSSYNLAA 244 (312)
T ss_dssp HHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred HHHHHHHHHHHHhCcccccccCceEEeCC
Confidence 8999999998886433222 257888864
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-22 Score=175.74 Aligned_cols=217 Identities=18% Similarity=0.135 Sum_probs=143.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH--HHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK--CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+|+||||||+|+||++++++|+++|++|+++.|+.+.... ....+. ...++.++.+|++|.+++++++ .
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~--------~ 79 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPI--------A 79 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHH--------T
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHH--------c
Confidence 6899999999999999999999999999988887653211 111222 1235778899999988877766 3
Q ss_pred CccEEEECCCCCCCCCCCCCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----C----C---
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEE-YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----H----V--- 161 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----~----~--- 161 (272)
.+|+|||+|+.... ..++ .++.+++|+.++.++++++.+.. +.++||++||..+.. . .
T Consensus 80 ~~D~Vih~A~~~~~------~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~ 150 (338)
T 2rh8_A 80 GCDFVFHVATPVHF------ASEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEK 150 (338)
T ss_dssp TCSEEEEESSCCCC---------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTT
T ss_pred CCCEEEEeCCccCC------CCCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChh
Confidence 58999999985311 1122 24589999999999999885431 257999999975211 0 0
Q ss_pred ---------C---CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh------------CHHHHHH
Q 024125 162 ---------G---SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE------------NKEFVDK 217 (272)
Q Consensus 162 ---------~---~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~------------~~~~~~~ 217 (272)
+ ....|+.||.+.+.+++.++.+. |+++++++||.+.++....... .+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~ 227 (338)
T 2rh8_A 151 NWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLING 227 (338)
T ss_dssp TTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHH
T ss_pred hccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccccc
Confidence 0 11259999999999988877653 8999999999998875421100 0000000
Q ss_pred HHh---cCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeC
Q 024125 218 VIA---RTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVD 256 (272)
Q Consensus 218 ~~~---~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~d 256 (272)
... ......+..++|+++++++++.. ....|.++..+
T Consensus 228 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~--~~~~~~~~~~~ 267 (338)
T 2rh8_A 228 MKGMQMLSGSVSIAHVEDVCRAHIFVAEK--ESASGRYICCA 267 (338)
T ss_dssp HHHHHHHHSSEEEEEHHHHHHHHHHHHHC--TTCCEEEEECS
T ss_pred ccccccccCcccEEEHHHHHHHHHHHHcC--CCcCCcEEEec
Confidence 000 00011467899999999998854 23356554333
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-21 Score=166.40 Aligned_cols=216 Identities=13% Similarity=0.125 Sum_probs=150.1
Q ss_pred EEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+||||||+|+||++++++|+++| ++|++++|+..... ...+.. .. +.+|+++.+.++++++... + +++|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~--~~---~~~d~~~~~~~~~~~~~~~--~-~~~d 70 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD--LN---IADYMDKEDFLIQIMAGEE--F-GDVE 70 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT--SC---CSEEEEHHHHHHHHHTTCC--C-SSCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc--ce---eccccccHHHHHHHHhccc--c-CCCc
Confidence 48999999999999999999999 89999998764321 111221 11 5689988888777664110 1 2699
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC-----------CCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-----------GSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-----------~~~~~ 166 (272)
+|||||+.... +.++++..+++|+.++.++++++.+ .+. ++|++||...+... .+...
T Consensus 71 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~ 139 (310)
T 1eq2_A 71 AIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNV 139 (310)
T ss_dssp EEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred EEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence 99999996433 1234578899999999999998854 345 99999997654322 23568
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh--hC--HHHHHHHHhc---------CC-CCCCCCHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL--EN--KEFVDKVIAR---------TP-LQRVGEPEE 232 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~--~~--~~~~~~~~~~---------~~-~~~~~~~~e 232 (272)
|+.+|.+.+.+++.++.+ .+++++.++||.+.++...... .. +......... .. ...+..++|
T Consensus 140 Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~D 216 (310)
T 1eq2_A 140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD 216 (310)
T ss_dssp HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred hHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHH
Confidence 999999999999988765 4899999999988776532100 00 1111111111 11 234567899
Q ss_pred HHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 233 VASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 233 ~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++++++.++.... |+.+++.+|..+.
T Consensus 217 va~~~~~~~~~~~----~~~~~i~~~~~~s 242 (310)
T 1eq2_A 217 VADVNLWFLENGV----SGIFNLGTGRAES 242 (310)
T ss_dssp HHHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred HHHHHHHHHhcCC----CCeEEEeCCCccC
Confidence 9999999886432 8899999886554
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.2e-21 Score=172.73 Aligned_cols=225 Identities=16% Similarity=0.071 Sum_probs=155.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEeeCChHHHHHHHHHHH---------------hCCCeEEEEEec
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGL---GAVVHTCSRNEVELNKCLKEWQ---------------SKGFVVSGSVCD 74 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~---G~~v~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~~D 74 (272)
...++|+||||||+|+||++++++|+++ |++|++++|+.+......+... ....++.++.+|
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 4567999999999999999999999999 8999999998654332221111 113578899999
Q ss_pred CC------CHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCe
Q 024125 75 AA------SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGS 148 (272)
Q Consensus 75 ~~------~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ 148 (272)
++ +.++++++++ ++|+|||||+.... +.+++.+++|+.++.++++++ .+.+..+
T Consensus 149 l~~~~~gld~~~~~~~~~--------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa----~~~~~~~ 208 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLAE--------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIA----LTTKLKP 208 (478)
T ss_dssp TTSGGGGCCHHHHHHHHH--------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHH----TSSSCCC
T ss_pred CCCcccCCCHHHHHHHHc--------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHH----HhCCCCe
Confidence 98 5666666653 58999999997533 223467899999999988877 4455579
Q ss_pred EEEecCCCCCCCCCC----------------------ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhh-
Q 024125 149 IVFISSVGGLSHVGS----------------------GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV- 205 (272)
Q Consensus 149 ii~vsS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~- 205 (272)
+|++||...+..... ...|+.||.+.+.+++.++.+. |++++.++||.+..+..
T Consensus 209 ~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~~ 285 (478)
T 4dqv_A 209 FTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTSY 285 (478)
T ss_dssp EEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSSS
T ss_pred EEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCcc
Confidence 999999654332111 1349999999999999998865 79999999998876421
Q ss_pred HhhhhCH----HHHHHHHh--cCC---------------CCCCCCHHHHHHHHHHHhcCC--CCCccccEEEeCCCcC
Q 024125 206 ERLLENK----EFVDKVIA--RTP---------------LQRVGEPEEVASLVAYLCLPA--ASYITGQIISVDGGFT 260 (272)
Q Consensus 206 ~~~~~~~----~~~~~~~~--~~~---------------~~~~~~~~e~a~~~~~l~~~~--~~~~~G~~i~~dgG~~ 260 (272)
....... ........ ..| ...+..++|++++++.++... .....|+++++.++..
T Consensus 286 ~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~ 363 (478)
T 4dqv_A 286 AGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD 363 (478)
T ss_dssp SSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred CCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence 0000000 11111111 111 113467899999999887531 1234588999988765
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-22 Score=165.08 Aligned_cols=198 Identities=15% Similarity=0.117 Sum_probs=144.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+|++|||||+|+||++++++|+++|+ +|++++|+.+. ...++..+.+|+++.+++++++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~-------- 65 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS-------- 65 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence 568999999999999999999999998 99999998754 1235667788887766543322
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+|+||||||.... +.+++++.+++|+.++.++++++. +.+.+++|++||...... +...|+.+|++
T Consensus 66 --~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~ 131 (215)
T 2a35_A 66 --IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADAK--SSIFYNRVKGE 131 (215)
T ss_dssp --CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred --hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHH----HcCCCEEEEECCcccCCC--CccHHHHHHHH
Confidence 8999999996321 234577889999999999888874 445579999999887643 45689999999
Q ss_pred HHHHHHHHHHHHccCCee-EEEeeCCcccChhhH-hhhhCHHHHHHHHhcCC----CCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 174 MNQLTRNLACEWAKDNIR-TNSVAPWYTKTSLVE-RLLENKEFVDKVIARTP----LQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~-v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++.+++. .+++ ++.++||++.++... .+... .. ....+ ...+.+++|+|+.+..++....
T Consensus 132 ~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~--~~---~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-- 197 (215)
T 2a35_A 132 LEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEI--LA---APIARILPGKYHGIEACDLARALWRLALEEG-- 197 (215)
T ss_dssp HHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGG--TT---CCCC----CHHHHHHHHHHHHHHHHHHTCCC--
T ss_pred HHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHH--HH---HhhhhccCCCcCcEeHHHHHHHHHHHHhcCC--
Confidence 9998764 3898 999999999887532 11100 00 00001 1123578999999999986432
Q ss_pred ccccEEEeCCCcCC
Q 024125 248 ITGQIISVDGGFTA 261 (272)
Q Consensus 248 ~~G~~i~~dgG~~~ 261 (272)
++.+++.++..+
T Consensus 198 --~~~~~i~~~~~~ 209 (215)
T 2a35_A 198 --KGVRFVESDELR 209 (215)
T ss_dssp --SEEEEEEHHHHH
T ss_pred --CCceEEcHHHHH
Confidence 677877766443
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-20 Score=158.51 Aligned_cols=199 Identities=15% Similarity=0.067 Sum_probs=146.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
|++|||||+|+||++++++|+++ |++|++++|+.++.+.+. . ..+.++.+|++|.+++.+++ ..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~--------~~ 66 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAF--------AG 66 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHT--------TT
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHH--------hc
Confidence 57999999999999999999998 999999999876654332 1 24567889999999887776 35
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
+|+|||+|+... . + ++|+.++.++++++ ++.+.++||++||..... ....|+.+|.+.+
T Consensus 67 ~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E 125 (287)
T 2jl1_A 67 VSKLLFISGPHY-------D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE---SIIPLAHVHLATE 125 (287)
T ss_dssp CSEEEECCCCCS-------C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG---CCSTHHHHHHHHH
T ss_pred CCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CCCchHHHHHHHH
Confidence 899999998521 1 1 57888888877776 455667999999987642 2347999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHH----hcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVI----ARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
.+++. .+++++.++||++.++....+.. .....-. .......+..++|+++++..++... ..+|+
T Consensus 126 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~ 194 (287)
T 2jl1_A 126 YAIRT-------TNIPYTFLRNALYTDFFVNEGLR--ASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE--GHENK 194 (287)
T ss_dssp HHHHH-------TTCCEEEEEECCBHHHHSSGGGH--HHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS--SCTTE
T ss_pred HHHHH-------cCCCeEEEECCEeccccchhhHH--HHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC--CCCCc
Confidence 98753 58999999999887655211111 1111100 0112235678999999999998643 24799
Q ss_pred EEEeCCCcCCC
Q 024125 252 IISVDGGFTAN 262 (272)
Q Consensus 252 ~i~~dgG~~~~ 262 (272)
.+++.+|..+.
T Consensus 195 ~~~i~~~~~~s 205 (287)
T 2jl1_A 195 TYNLVSNQPWT 205 (287)
T ss_dssp EEEECCSSCBC
T ss_pred EEEecCCCcCC
Confidence 99999986554
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=168.47 Aligned_cols=219 Identities=11% Similarity=0.085 Sum_probs=150.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++++||||||+|+||++++++|+++|++|++++|+.....+..+.+. ...++.++.+|+++.. +
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~- 89 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y- 89 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C-
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h-
Confidence 3678999999999999999999999999999999986432111111111 1235778889998742 2
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC--------------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-------------- 159 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-------------- 159 (272)
..+|+|||||+....... .++++..+++|+.++.++++++.+ .+ .++|++||...+.
T Consensus 90 ~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E~~~~~ 160 (343)
T 2b69_A 90 IEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGH 160 (343)
T ss_dssp CCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCB
T ss_pred cCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCccccccc
Confidence 479999999996422110 123567899999999999998854 23 4999999975432
Q ss_pred --CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC--HHHHHHHHhcCC---------CCC
Q 024125 160 --HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN--KEFVDKVIARTP---------LQR 226 (272)
Q Consensus 160 --~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~ 226 (272)
+..+...|+.+|++.+.+++.++.+. +++++.++||.+.++........ ..+........+ ...
T Consensus 161 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T 2b69_A 161 VNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRA 237 (343)
T ss_dssp CCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEE
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEe
Confidence 23345679999999999999998875 79999999999887653210000 122233322222 123
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 227 VGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 227 ~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+..++|+|++++.++... .|+.+++.+|..+.
T Consensus 238 ~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~s 269 (343)
T 2b69_A 238 FQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHT 269 (343)
T ss_dssp CEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEE
T ss_pred eEeHHHHHHHHHHHHhcC----CCCeEEecCCCCCc
Confidence 457999999999888542 26788888876443
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-21 Score=165.07 Aligned_cols=196 Identities=15% Similarity=0.150 Sum_probs=144.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+++|||||+|+||++++++|+++|++|++++|. .+|++|.+++.++++.. ++|
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~------~~d 58 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI------RPH 58 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH------CCS
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc------CCC
Confidence 389999999999999999999999999999982 37999999998888754 599
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~~~ 166 (272)
+|||+|+..... ...++++..+++|+.++.++++++.+ .+ .++|++||...+.+ ..+...
T Consensus 59 ~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~ 129 (287)
T 3sc6_A 59 IIIHCAAYTKVD----QAEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINI 129 (287)
T ss_dssp EEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSH
T ss_pred EEEECCcccChH----HHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCH
Confidence 999999974321 11245778999999999999998844 33 38999999765432 234578
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC-------CCCCCHHHHHHHHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-------QRVGEPEEVASLVAY 239 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~e~a~~~~~ 239 (272)
|+.+|.+.+.+++.++. +++.++|+.+..+....+. ...........+. ..+..++|+++++..
T Consensus 130 Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 200 (287)
T 3sc6_A 130 YGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFV--KTMIRLGKEREEISVVADQIGSPTYVADLNVMINK 200 (287)
T ss_dssp HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH--HHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHH--HHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHH
Confidence 99999999999887643 4678899988765432221 1222222222222 234459999999999
Q ss_pred HhcCCCCCccccEEEeCCCcCCC
Q 024125 240 LCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++.... ++.+++.+|..+.
T Consensus 201 ~~~~~~----~~~~~i~~~~~~s 219 (287)
T 3sc6_A 201 LIHTSL----YGTYHVSNTGSCS 219 (287)
T ss_dssp HHTSCC----CEEEECCCBSCEE
T ss_pred HHhCCC----CCeEEEcCCCccc
Confidence 996533 6689999886544
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.6e-21 Score=160.40 Aligned_cols=197 Identities=18% Similarity=0.117 Sum_probs=140.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+++|||||+|+||++++++|+ +|++|++++|+.+. + .+ +.+|++|.++++++++.+ ++|
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~~-----~~~Dl~~~~~~~~~~~~~------~~d 59 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------GG-----YKLDLTDFPRLEDFIIKK------RPD 59 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------TC-----EECCTTSHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------CC-----ceeccCCHHHHHHHHHhc------CCC
Confidence 369999999999999999999 48999999998642 0 11 689999999998888654 599
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC----------CChhh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG----------SGSIY 167 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~----------~~~~Y 167 (272)
+||||||.... +.+.+++++.+++|+.++.++++++.+ .+ ++||++||...+.+.+ +...|
T Consensus 60 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y 130 (273)
T 2ggs_A 60 VIINAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYY 130 (273)
T ss_dssp EEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHH
T ss_pred EEEECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHH
Confidence 99999996432 123467889999999999999998843 34 5999999987654432 35789
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHh
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTP------LQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~e~a~~~~~l~ 241 (272)
+.+|++++.+++. +....+|++.+. | ++++...+ ........+ ...+..++|+++++.+++
T Consensus 131 ~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~ 197 (273)
T 2ggs_A 131 GLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIYV------YKTLKEGKTVFAFKGYYSPISARKLASAILELL 197 (273)
T ss_dssp HHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHHH------HHHHHTTCCEEEESCEECCCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHHHHH------HHHHHcCCCEEeecCCCCceEHHHHHHHHHHHH
Confidence 9999999999877 222234444443 3 23332211 122222222 346788999999999998
Q ss_pred cCCCCCccccEEEeCCCcCCC
Q 024125 242 LPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.... +| .+++++ ..+.
T Consensus 198 ~~~~---~g-~~~i~~-~~~s 213 (273)
T 2ggs_A 198 ELRK---TG-IIHVAG-ERIS 213 (273)
T ss_dssp HHTC---CE-EEECCC-CCEE
T ss_pred hcCc---CC-eEEECC-Cccc
Confidence 6432 45 888887 5443
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=9.2e-21 Score=163.62 Aligned_cols=211 Identities=11% Similarity=0.067 Sum_probs=151.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++|+||||||+|+||++++++|+++|++|++++|+. .+|++|.+++++++++. +
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~------~ 55 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE------R 55 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH------C
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc------C
Confidence 357999999999999999999999999999988763 27999999988887643 6
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC---------------
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--------------- 160 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~--------------- 160 (272)
+|+|||+|+..... ....++.+..+++|+.++.++++++. +.+..++|++||...+..
T Consensus 56 ~d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~ 128 (321)
T 1e6u_A 56 IDQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAH----QNDVNKLLFLGSSCIYPKLAKQPMAESELLQGT 128 (321)
T ss_dssp CSEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred CCEEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEccHHHcCCCCCCCcCccccccCC
Confidence 99999999963211 11234567889999999999888874 345579999999765421
Q ss_pred CCC-ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHHHHHHHHh-------cC------
Q 024125 161 VGS-GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDKVIA-------RT------ 222 (272)
Q Consensus 161 ~~~-~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~-------~~------ 222 (272)
..+ ...|+.+|.+.+.+++.++.++ +++++.++||.+..+....... -+........ ..
T Consensus 129 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 205 (321)
T 1e6u_A 129 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG 205 (321)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCC
Confidence 111 2589999999999999998775 7999999999887765321000 0122222211 11
Q ss_pred -CCCCCCCHHHHHHHHHHHhcCCCC------CccccEEEeCCCcCCC
Q 024125 223 -PLQRVGEPEEVASLVAYLCLPAAS------YITGQIISVDGGFTAN 262 (272)
Q Consensus 223 -~~~~~~~~~e~a~~~~~l~~~~~~------~~~G~~i~~dgG~~~~ 262 (272)
....+..++|++++++.++..... ...|+.+++.+|..+.
T Consensus 206 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s 252 (321)
T 1e6u_A 206 TPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCT 252 (321)
T ss_dssp CCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEE
T ss_pred CEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCcc
Confidence 111345799999999988854321 1247889998876544
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-21 Score=166.11 Aligned_cols=203 Identities=15% Similarity=0.100 Sum_probs=146.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+++|||||+|+||++++++|+ +|++|++++|+.+ .+.+|++|.+++.++++.. ++|
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~------~~d 56 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL------RPD 56 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH------CCS
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc------CCC
Confidence 379999999999999999999 8999999998761 2468999999988887643 599
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC-----------CCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-----------GSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~-----------~~~~~ 166 (272)
+|||+|+..... .+.+++++.+++|+.++.++++++ ++.+ .++|++||...+.+. .+...
T Consensus 57 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~ 127 (299)
T 1n2s_A 57 VIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAA----NETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNV 127 (299)
T ss_dssp EEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHH----TTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred EEEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEecccEEeCCCCCCCCCCCCCCCccH
Confidence 999999963211 112346788999999999999887 3444 489999997654322 23568
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC-------CCCCCHHHHHHHHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-------QRVGEPEEVASLVAY 239 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~e~a~~~~~ 239 (272)
|+.+|.+.+.+++.++. +++.++|+.+.++....+. +..........+. ..+..++|+++++..
T Consensus 128 Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 198 (299)
T 1n2s_A 128 YGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFA--KTMLRLAKERQTLSVINDQYGAPTGAELLADCTAH 198 (299)
T ss_dssp HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH--HHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHH--HHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHH
Confidence 99999999999877642 7889999998876432211 1222222222221 233459999999999
Q ss_pred HhcCCCCCc-cccEEEeCCCcCCC
Q 024125 240 LCLPAASYI-TGQIISVDGGFTAN 262 (272)
Q Consensus 240 l~~~~~~~~-~G~~i~~dgG~~~~ 262 (272)
++....... .|+.+++.+|..++
T Consensus 199 ~~~~~~~~~~~~~~~~i~~~~~~s 222 (299)
T 1n2s_A 199 AIRVALNKPEVAGLYHLVAGGTTT 222 (299)
T ss_dssp HHHHHHHCGGGCEEEECCCBSCEE
T ss_pred HHHHhccccccCceEEEeCCCCCC
Confidence 886432123 58899999886544
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=161.27 Aligned_cols=211 Identities=14% Similarity=0.111 Sum_probs=147.1
Q ss_pred EEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 19 TALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+||||||+|+||++++++|+++ |++|++++|+....+ .+.++.+|++|.+++++++++ .++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~------~~~ 63 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK------YSI 63 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH------TTC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh------cCC
Confidence 4899999999999999999998 889999988654321 245678999999998888764 269
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC------------CCC
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV------------GSG 164 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~------------~~~ 164 (272)
|+|||+|+.... ...++++..+++|+.++.++++++. +.+.+++|++||...+... .+.
T Consensus 64 d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~ 134 (317)
T 3ajr_A 64 DAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAK----QHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR 134 (317)
T ss_dssp CEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred cEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence 999999996321 1234577899999999999998874 3455799999997765432 146
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccCh-hhHhh-hhC--HHHHHHHHhcCC---------CCCCCCHH
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS-LVERL-LEN--KEFVDKVIARTP---------LQRVGEPE 231 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~-~~~~~-~~~--~~~~~~~~~~~~---------~~~~~~~~ 231 (272)
..|+.+|.+.+.+++.++.++ +++++.+.|+.+..+ +.... ... ...........+ ...+..++
T Consensus 135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 211 (317)
T 3ajr_A 135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP 211 (317)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHH
T ss_pred chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHH
Confidence 789999999999999988765 799999986544332 10000 000 011111111111 11224689
Q ss_pred HHHHHHHHHhcCC-CCCccccEEEeCCC
Q 024125 232 EVASLVAYLCLPA-ASYITGQIISVDGG 258 (272)
Q Consensus 232 e~a~~~~~l~~~~-~~~~~G~~i~~dgG 258 (272)
|++++++.++... ....+|+.+++.|+
T Consensus 212 Dva~a~~~~l~~~~~~~~~g~~~~i~~~ 239 (317)
T 3ajr_A 212 DALKALVDLYEADRDKLVLRNGYNVTAY 239 (317)
T ss_dssp HHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred HHHHHHHHHHhCCccccccCceEecCCc
Confidence 9999998887543 23345788888764
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.8e-20 Score=157.32 Aligned_cols=215 Identities=15% Similarity=0.076 Sum_probs=148.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++|+||||||+|+||++++++|+++|+ +.. .....+..+.+|++|.+++.++++.
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----------~~~~~~~~~~~D~~d~~~~~~~~~~------ 59 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-----------EDWVFVSSKDADLTDTAQTRALFEK------ 59 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-----------CEEEECCTTTCCTTSHHHHHHHHHH------
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-----------ccccccCceecccCCHHHHHHHHhh------
Confidence 36789999999999999999999999997 100 0001222346899999998888864
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-------------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------- 160 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~------------- 160 (272)
.++|+|||+|+..... ..+.++.+..+++|+.++.++++++ ++.+..++|++||...+..
T Consensus 60 ~~~d~Vih~A~~~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~ 132 (319)
T 4b8w_A 60 VQPTHVIHLAAMVGGL---FRNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCIFPDKTTYPIDETMIHN 132 (319)
T ss_dssp SCCSEEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGGSCSSCCSSBCGGGGGB
T ss_pred cCCCEEEECceecccc---cccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhhcCCCCCCCcccccccc
Confidence 2699999999973211 0122345678999999999988887 4455679999999865422
Q ss_pred ---CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHHHHHH----HHhcCCC-----
Q 024125 161 ---VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDK----VIARTPL----- 224 (272)
Q Consensus 161 ---~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~----~~~~~~~----- 224 (272)
.+....|+.+|.+.+.+++.++++. +++++.++|+.+..+....... .+.+... .....+.
T Consensus 133 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (319)
T 4b8w_A 133 GPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGT 209 (319)
T ss_dssp SCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESC
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCC
Confidence 1122369999999999999998876 7999999999887765321000 0112222 2222221
Q ss_pred ----CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 225 ----QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 225 ----~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
..+..++|++++++.++... ....|+.+++.+|..++
T Consensus 210 g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s 250 (319)
T 4b8w_A 210 GNPRRQFIYSLDLAQLFIWVLREY-NEVEPIILSVGEEDEVS 250 (319)
T ss_dssp SCCEECEEEHHHHHHHHHHHHHHC-CCSSCEEECCCGGGCEE
T ss_pred CCeeEEEEeHHHHHHHHHHHHhcc-ccCCceEEEecCCCcee
Confidence 13357999999999988642 22457888888776544
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.1e-20 Score=156.91 Aligned_cols=195 Identities=12% Similarity=0.104 Sum_probs=137.8
Q ss_pred EEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 19 TALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
++|||||+|+||++++++|+++ |++|++++|+.++.+.+. . ..+.++.+|++|.+++++++ ..+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~--------~~~ 66 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSAL--------QGV 66 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHT--------TTC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHH--------hCC
Confidence 4899999999999999999998 999999999876654332 1 24567889999999887776 468
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|+|||+|+... ..|+.++.++++++ ++.+.++||++||..... ....|+.+|.+.+.
T Consensus 67 d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~sK~~~e~ 123 (286)
T 2zcu_A 67 EKLLLISSSEV----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHADT---SPLGLADEHIETEK 123 (286)
T ss_dssp SEEEECC------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTTT---CCSTTHHHHHHHHH
T ss_pred CEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CcchhHHHHHHHHH
Confidence 99999998521 12566665555554 555567999999987652 23579999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHH----hcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVI----ARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
+++. .+++++.++||++.+++...+ ......-. .......+..++|+++++..++.... .+|+.
T Consensus 124 ~~~~-------~~~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~ 191 (286)
T 2zcu_A 124 MLAD-------SGIVYTLLRNGWYSENYLASA---PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGKV 191 (286)
T ss_dssp HHHH-------HCSEEEEEEECCBHHHHHTTH---HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCE
T ss_pred HHHH-------cCCCeEEEeChHHhhhhHHHh---HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCce
Confidence 8763 389999999998877653211 01111000 01122356789999999999986432 47999
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
++++||..+.
T Consensus 192 ~~i~~~~~~s 201 (286)
T 2zcu_A 192 YELAGDSAWT 201 (286)
T ss_dssp EEECCSSCBC
T ss_pred EEEeCCCcCC
Confidence 9999986554
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=7.8e-20 Score=173.92 Aligned_cols=234 Identities=18% Similarity=0.126 Sum_probs=155.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++++|+||||||+|+||++++++|+++|++|++++|+.....+..+++.. ...++.++.+|+++.+++++++++.
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~--- 83 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY--- 83 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence 457889999999999999999999999999999999865432222222211 1235667889999999988887642
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----------- 160 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~----------- 160 (272)
++|+|||||+...... ..+..++.+++|+.++.++++++ ++.+.++||++||...+..
T Consensus 84 ---~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~ 152 (699)
T 1z45_A 84 ---KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIP 152 (699)
T ss_dssp ---CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBC
T ss_pred ---CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCccccccCCcc
Confidence 6999999999642211 12334678999999999887765 4445579999999764321
Q ss_pred ----CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh--------hC-HHHHHHHHhc--CCC-
Q 024125 161 ----VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL--------EN-KEFVDKVIAR--TPL- 224 (272)
Q Consensus 161 ----~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~--------~~-~~~~~~~~~~--~~~- 224 (272)
..+...|+.+|++++.+++.++.++ ..++++..++|+.+..+...... .. ...+...... .+.
T Consensus 153 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (699)
T 1z45_A 153 EECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLY 231 (699)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCC
T ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceE
Confidence 1234689999999999999998875 45899999998766543211000 00 0111111111 111
Q ss_pred --------------CCCCCHHHHHHHHHHHhcCC----CCCccccEEEeCCCcCC
Q 024125 225 --------------QRVGEPEEVASLVAYLCLPA----ASYITGQIISVDGGFTA 261 (272)
Q Consensus 225 --------------~~~~~~~e~a~~~~~l~~~~----~~~~~G~~i~~dgG~~~ 261 (272)
..+..++|+|++++.++... ...-.|+.+++.+|..+
T Consensus 232 ~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~ 286 (699)
T 1z45_A 232 IFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGS 286 (699)
T ss_dssp CC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCE
T ss_pred EeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCC
Confidence 12346899999998877421 11223678888887644
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.1e-20 Score=168.07 Aligned_cols=217 Identities=13% Similarity=0.056 Sum_probs=153.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH---HHHHHHHHH---------hCCCeEEEEEecCCCHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE---LNKCLKEWQ---------SKGFVVSGSVCDAASPDQREKL 84 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~---~~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~ 84 (272)
.|+||||||+|+||++++++|.+.|++|++++|+... .+.+.+.+. ....++.++.+|+++.+++.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-- 227 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-- 227 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence 5799999999999999999999899999999998763 223322221 12457889999999977765
Q ss_pred HHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC----
Q 024125 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---- 160 (272)
Q Consensus 85 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~---- 160 (272)
.. .++|+|||||+... ....++..+++|+.++.++++++.+ +..++|++||... ..
T Consensus 228 ------~~-~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~v-G~~~~~ 287 (508)
T 4f6l_B 228 ------LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV-GTYFDI 287 (508)
T ss_dssp ------CS-SCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCT-TSEECT
T ss_pred ------Cc-cCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhh-ccCCcc
Confidence 12 57999999999642 1235677889999999999998743 4479999999876 11
Q ss_pred ---------------CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-----hC--HHHHHHH
Q 024125 161 ---------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-----EN--KEFVDKV 218 (272)
Q Consensus 161 ---------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-----~~--~~~~~~~ 218 (272)
..+...|+.+|.+.+.+++.++. .|++++.++||.+.++...... .. ...+...
T Consensus 288 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~ 363 (508)
T 4f6l_B 288 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDL 363 (508)
T ss_dssp TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHH
T ss_pred CCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHH
Confidence 12457899999999999988654 5899999999988776543220 00 1222222
Q ss_pred HhcC--CC------CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 219 IART--PL------QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 219 ~~~~--~~------~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.... +. ..+..++|+|++++.++.... .|+++++.+|..+.
T Consensus 364 ~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s 412 (508)
T 4f6l_B 364 LQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMP 412 (508)
T ss_dssp TTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEE
T ss_pred HHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCC
Confidence 2211 11 124568999999999986433 79999999987654
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-21 Score=162.87 Aligned_cols=201 Identities=15% Similarity=0.138 Sum_probs=145.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++++||||| +|+||++++++|+++|++|++++|+.+.. ...+.++.+|++|.+++.++++ ++
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~ 63 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH-------LR 63 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG-------GC
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc-------CC
Confidence 357899999 59999999999999999999999986542 2356678999999988777663 36
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSG 164 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~ 164 (272)
+|+|||+|+. ...+.+..+++|+.++.++++++ ++.+.+++|++||...+.. ..+.
T Consensus 64 ~d~vih~a~~---------~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~ 130 (286)
T 3gpi_A 64 PEILVYCVAA---------SEYSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK 130 (286)
T ss_dssp CSEEEECHHH---------HHHC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC
T ss_pred CCEEEEeCCC---------CCCCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC
Confidence 9999999985 22445678889999998888876 4556679999999765432 2245
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHh------cCCCCCCCCHHHHHHHHH
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIA------RTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~e~a~~~~ 238 (272)
..|+.+|.+.+.+ +.. ++++.++|+.+..+....+ ...... ......+..++|+++++.
T Consensus 131 ~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 195 (286)
T 3gpi_A 131 DFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRM------IRQAQTPEQWPARNAWTNRIHRDDGAAFIA 195 (286)
T ss_dssp SHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHH------HHHTTCGGGSCSSBCEECEEEHHHHHHHHH
T ss_pred ChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhH------HHHHHhcccCCCcCceeEEEEHHHHHHHHH
Confidence 7899999999987 542 7899999998877653321 111111 111223467899999999
Q ss_pred HHhcCCCCCccccEEEeCCCcCCC
Q 024125 239 YLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 239 ~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.++........|+.+++.+|..+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~s 219 (286)
T 3gpi_A 196 YLIQQRSHAVPERLYIVTDNQPLP 219 (286)
T ss_dssp HHHHHHTTSCCCSEEEECCSCCEE
T ss_pred HHHhhhccCCCCceEEEeCCCCCC
Confidence 998643224568999999886544
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-21 Score=164.59 Aligned_cols=214 Identities=14% Similarity=0.091 Sum_probs=140.3
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh--CCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++||||||+|+||++++++|+++|++|++++|+........+.+.. ....+.++.+|++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------- 68 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------- 68 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence 5679999999999999999999999999999999976510000000000 0011222233332
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------C
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------V 161 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~ 161 (272)
++|+|||+|+........ ++....++ |+.++.++++++.. .+..++|++||...+.. .
T Consensus 69 --~~d~vi~~a~~~~~~~~~----~~~~~~~~-n~~~~~~ll~a~~~----~~v~~~v~~SS~~v~~~~~~~~~~E~~~~ 137 (321)
T 3vps_A 69 --DVRLVYHLASHKSVPRSF----KQPLDYLD-NVDSGRHLLALCTS----VGVPKVVVGSTCEVYGQADTLPTPEDSPL 137 (321)
T ss_dssp --TEEEEEECCCCCCHHHHT----TSTTTTHH-HHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred --cCCEEEECCccCChHHHH----hCHHHHHH-HHHHHHHHHHHHHH----cCCCeEEEecCHHHhCCCCCCCCCCCCCC
Confidence 699999999964321111 11234556 99999988888743 34579999999765432 2
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCe-eEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC---------CCCCCCHH
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNI-RTNSVAPWYTKTSLVERLLENKEFVDKVIARTP---------LQRVGEPE 231 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 231 (272)
.+...|+.+|.+.+.+++.++.+ .++ +++.++|+.+.++......-.+.+........+ ...+..++
T Consensus 138 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 214 (321)
T 3vps_A 138 SPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYIT 214 (321)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHH
Confidence 33578999999999999998876 478 999999998877653210001122222222221 12345799
Q ss_pred HHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 232 EVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 232 e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
|++++++.++..... | .+++.+|..++
T Consensus 215 Dva~~~~~~~~~~~~---g-~~~i~~~~~~s 241 (321)
T 3vps_A 215 DVVDKLVALANRPLP---S-VVNFGSGQSLS 241 (321)
T ss_dssp HHHHHHHHGGGSCCC---S-EEEESCSCCEE
T ss_pred HHHHHHHHHHhcCCC---C-eEEecCCCccc
Confidence 999999999975433 7 99999987554
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=148.45 Aligned_cols=198 Identities=15% Similarity=0.063 Sum_probs=135.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
++||||||+|+||++++++|++. |++|++++|+.++...+. ...+.++.+|++|.+++.+++ ..+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~------~~~v~~~~~D~~d~~~l~~~~--------~~~ 66 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW------RGKVSVRQLDYFNQESMVEAF--------KGM 66 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG------BTTBEEEECCTTCHHHHHHHT--------TTC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh------hCCCEEEEcCCCCHHHHHHHH--------hCC
Confidence 36999999999999999999998 999999999987643321 235778899999999887776 469
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|+|||||+.... . ..|+.++. .+++.+++.+.++||++||....... .|..++...
T Consensus 67 d~vi~~a~~~~~-------~-------~~~~~~~~----~l~~aa~~~gv~~iv~~Ss~~~~~~~----~~~~~~~~~-- 122 (289)
T 3e48_A 67 DTVVFIPSIIHP-------S-------FKRIPEVE----NLVYAAKQSGVAHIIFIGYYADQHNN----PFHMSPYFG-- 122 (289)
T ss_dssp SEEEECCCCCCS-------H-------HHHHHHHH----HHHHHHHHTTCCEEEEEEESCCSTTC----CSTTHHHHH--
T ss_pred CEEEEeCCCCcc-------c-------hhhHHHHH----HHHHHHHHcCCCEEEEEcccCCCCCC----CCccchhHH--
Confidence 999999986321 1 12555554 45555577777899999996643322 233333211
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCC----CCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQR----VGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
.+...+...+++++.++||++.+++...+. ..........+.+. +.+++|+|+.+..++.....+ |+.
T Consensus 123 ---~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g~~ 194 (289)
T 3e48_A 123 ---YASRLLSTSGIDYTYVRMAMYMDPLKPYLP---ELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--GKR 194 (289)
T ss_dssp ---HHHHHHHHHCCEEEEEEECEESTTHHHHHH---HHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--TCE
T ss_pred ---HHHHHHHHcCCCEEEEeccccccccHHHHH---HHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--Cce
Confidence 222333445899999999999888653221 11111111223332 568999999999999765443 999
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
+++. |..+.
T Consensus 195 ~~~~-~~~~s 203 (289)
T 3e48_A 195 YLLS-GYSYD 203 (289)
T ss_dssp EEEC-CEEEE
T ss_pred EEeC-CCcCC
Confidence 9999 76544
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.77 E-value=7.5e-19 Score=150.34 Aligned_cols=205 Identities=15% Similarity=0.043 Sum_probs=137.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||||+|+||++++++|+++| ++|++++|+.++... +.+... .+.++.+|++|.+++.+++ ..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~--~~~~~~~D~~d~~~l~~~~--------~~ 72 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQ--GAEVVQGDQDDQVIMELAL--------NG 72 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHT--TCEEEECCTTCHHHHHHHH--------TT
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHC--CCEEEEecCCCHHHHHHHH--------hc
Confidence 5899999999999999999999998 999999998765421 222222 3567789999999988777 36
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC--CCCCChhhHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--HVGSGSIYGATKAA 173 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~--~~~~~~~Y~~sK~a 173 (272)
+|+||||++.... . ..+.|+.+.. .+++.+++.+.++||++|+..... .......|..+|.+
T Consensus 73 ~d~vi~~a~~~~~----------~--~~~~~~~~~~----~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~ 136 (299)
T 2wm3_A 73 AYATFIVTNYWES----------C--SQEQEVKQGK----LLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGE 136 (299)
T ss_dssp CSEEEECCCHHHH----------T--CHHHHHHHHH----HHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHH
T ss_pred CCEEEEeCCCCcc----------c--cchHHHHHHH----HHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHH
Confidence 9999999984210 0 1234554444 444555666668999966644221 11224679999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHH-HHHhcCCCC----CCCCHHHHHHHHHHHhcCCCCCc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVD-KVIARTPLQ----RVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
++.+++. .|++++.++||++.+++...+........ ......+.+ .+.+++|+++.+..++.... ..
T Consensus 137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~ 208 (299)
T 2wm3_A 137 VEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE-KY 208 (299)
T ss_dssp HHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-HH
T ss_pred HHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh-hh
Confidence 9998764 28999999999998876542211000000 000001211 34589999999999886422 23
Q ss_pred cccEEEeCC
Q 024125 249 TGQIISVDG 257 (272)
Q Consensus 249 ~G~~i~~dg 257 (272)
.|+.+++.|
T Consensus 209 ~g~~~~~~g 217 (299)
T 2wm3_A 209 VGQNIGLST 217 (299)
T ss_dssp TTCEEECCS
T ss_pred CCeEEEeee
Confidence 688999876
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.2e-19 Score=154.16 Aligned_cols=206 Identities=13% Similarity=0.021 Sum_probs=138.2
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEec-CCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD-AASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~ 93 (272)
+.+|++|||||+|+||++++++|+++|++|++++|+.+... .+.+... ..+..+.+| ++|.+++.+++
T Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~-~~v~~v~~D~l~d~~~l~~~~-------- 71 (352)
T 1xgk_A 3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI-PNVTLFQGPLLNNVPLMDTLF-------- 71 (352)
T ss_dssp CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS-TTEEEEESCCTTCHHHHHHHH--------
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc-CCcEEEECCccCCHHHHHHHH--------
Confidence 34688999999999999999999999999999999876542 1223221 256778999 99999988776
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCC-CCCCCCCChhhHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVG-GLSHVGSGSIYGATK 171 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~-~~~~~~~~~~Y~~sK 171 (272)
..+|+||||++.... +.|..+ . .+++.+++.+ .++||++||.. ...+......|+.+|
T Consensus 72 ~~~d~Vi~~a~~~~~---------------~~~~~~-~----~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK 131 (352)
T 1xgk_A 72 EGAHLAFINTTSQAG---------------DEIAIG-K----DLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPK 131 (352)
T ss_dssp TTCSEEEECCCSTTS---------------CHHHHH-H----HHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHH
T ss_pred hcCCEEEEcCCCCCc---------------HHHHHH-H----HHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHH
Confidence 358999999975310 124443 4 4444445555 68999999986 333434557899999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh--------hCHHHHHH-HHhcCCCCCCCCH-HHHHHHHHHHh
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL--------ENKEFVDK-VIARTPLQRVGEP-EEVASLVAYLC 241 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~-~e~a~~~~~l~ 241 (272)
++.+.+++.+ +++++.++||++-+....... ........ .........+.++ +|+++++..++
T Consensus 132 ~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l 204 (352)
T 1xgk_A 132 FTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF 204 (352)
T ss_dssp HHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHH
Confidence 9999988652 899999999976544321100 00000000 0000001123567 89999999988
Q ss_pred cCCCCCccccEEEeCCC
Q 024125 242 LPAASYITGQIISVDGG 258 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG 258 (272)
........|+++++.++
T Consensus 205 ~~~~~~~~g~~~~l~~~ 221 (352)
T 1xgk_A 205 KDGPQKWNGHRIALTFE 221 (352)
T ss_dssp HHCHHHHTTCEEEECSE
T ss_pred hCCchhhCCeEEEEecC
Confidence 64333456899998865
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.3e-18 Score=151.63 Aligned_cols=192 Identities=16% Similarity=0.183 Sum_probs=140.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
++||||||+|+||++++++|+++|+ +|+.++|+ +|.++++++++ ++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~--------~~ 47 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL--------KA 47 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH--------HC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc--------cC
Confidence 4799999999999999999999998 88877764 66777777764 48
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-eEEEecCCCCCCCCCCChhhHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMN 175 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~ii~vsS~~~~~~~~~~~~Y~~sK~a~~ 175 (272)
|+|||+|+..... +.+..+++|+.++.++++++ ++.+.. ++|++||..... ...|+.+|.+.+
T Consensus 48 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E 111 (369)
T 3st7_A 48 DFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESKLQGE 111 (369)
T ss_dssp SEEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHHHHHH
T ss_pred CEEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHHHHHH
Confidence 9999999974432 23346678999998888876 455544 899999987654 578999999999
Q ss_pred HHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC--HHHHHHHHhcCCCC--------CCCCHHHHHHHHHHHhcCCC
Q 024125 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN--KEFVDKVIARTPLQ--------RVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 176 ~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~e~a~~~~~l~~~~~ 245 (272)
.+++.++++. ++++..++|+.+..+........ +.+........+.. .+..++|+|++++.++....
T Consensus 112 ~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~ 188 (369)
T 3st7_A 112 QLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP 188 (369)
T ss_dssp HHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCc
Confidence 9999998886 68899999998877543211000 12233333333222 23458999999999986433
Q ss_pred CCccccEEEeCCCcCCC
Q 024125 246 SYITGQIISVDGGFTAN 262 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~ 262 (272)
. ..|+.+++.+|..+.
T Consensus 189 ~-~~~~~~~i~~~~~~s 204 (369)
T 3st7_A 189 T-IENGVPTVPNVFKVT 204 (369)
T ss_dssp C-EETTEECCSCCEEEE
T ss_pred c-cCCceEEeCCCCcee
Confidence 2 248899998875543
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.4e-18 Score=144.44 Aligned_cols=195 Identities=14% Similarity=0.110 Sum_probs=129.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-------HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-------VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+++|+||||+|+||++++++|+++|++|++++|+. ++.+.+ +++... .+.++.+|++|.+++.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~--~v~~v~~D~~d~~~l~~~~---- 74 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSL--GVILLEGDINDHETLVKAI---- 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHT--TCEEEECCTTCHHHHHHHH----
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhC--CCEEEEeCCCCHHHHHHHH----
Confidence 47899999999999999999999999999999986 444433 333333 3567889999999887777
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCC------CCC
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS------HVG 162 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~------~~~ 162 (272)
..+|+||||++... +.+..+++++ +++.+ ..++|. |..+.. ..+
T Consensus 75 ----~~~d~vi~~a~~~~-------------------~~~~~~l~~a----a~~~g~v~~~v~--S~~g~~~~~~~~~~p 125 (307)
T 2gas_A 75 ----KQVDIVICAAGRLL-------------------IEDQVKIIKA----IKEAGNVKKFFP--SEFGLDVDRHDAVEP 125 (307)
T ss_dssp ----TTCSEEEECSSSSC-------------------GGGHHHHHHH----HHHHCCCSEEEC--SCCSSCTTSCCCCTT
T ss_pred ----hCCCEEEECCcccc-------------------cccHHHHHHH----HHhcCCceEEee--cccccCcccccCCCc
Confidence 36999999999632 2333344444 45555 567773 433321 122
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH------HHHHHHHhcCCCCCCCCHHHHHHH
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK------EFVDKVIARTPLQRVGEPEEVASL 236 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~e~a~~ 236 (272)
....| .+|.+++.+.+. .+++++.++||++.+.+...+.... ..............+.+++|+++.
T Consensus 126 ~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 197 (307)
T 2gas_A 126 VRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF 197 (307)
T ss_dssp HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred chhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence 24679 999999887753 3789999999999887654322110 000000000112234689999999
Q ss_pred HHHHhcCCCCCccccEEEeCC
Q 024125 237 VAYLCLPAASYITGQIISVDG 257 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~dg 257 (272)
+..++.... ..|+.+.+.|
T Consensus 198 ~~~~l~~~~--~~~~~~~~~~ 216 (307)
T 2gas_A 198 TIRAANDPN--TLNKAVHIRL 216 (307)
T ss_dssp HHHHHTCGG--GTTEEEECCC
T ss_pred HHHHHcCcc--ccCceEEEeC
Confidence 999986532 2377777765
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.7e-18 Score=143.34 Aligned_cols=196 Identities=11% Similarity=0.027 Sum_probs=135.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.++|||||+ |+||++++++|+++|++|++++|+.+....+.. ..+.++.+|++|.+ + ..+
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~-~~~ 64 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------L-DGV 64 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------C-TTC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------c-CCC
Confidence 378999998 999999999999999999999999877654432 25778899999832 2 579
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc--CCCCeEEEecCCCCCCC-----------CCC
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA--SGVGSIVFISSVGGLSH-----------VGS 163 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~g~ii~vsS~~~~~~-----------~~~ 163 (272)
|+|||+|+..... .. ..+.++..+++ .+..++|++||...+.. ..+
T Consensus 65 d~vi~~a~~~~~~-----~~----------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p 123 (286)
T 3ius_A 65 THLLISTAPDSGG-----DP----------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTP 123 (286)
T ss_dssp CEEEECCCCBTTB-----CH----------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCC
T ss_pred CEEEECCCccccc-----cH----------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCC
Confidence 9999999964321 11 01344444455 45579999999754322 233
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH-HHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE-FVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
...|+.+|.+.+.+++.+ .+++++.++|+.+..+....+..-.. ....+........+..++|+++++..++.
T Consensus 124 ~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 197 (286)
T 3ius_A 124 TAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMA 197 (286)
T ss_dssp CSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHh
Confidence 467999999999988776 58999999999887765322110000 00000000112244568999999999986
Q ss_pred CCCCCccccEEEeCCCcCCC
Q 024125 243 PAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~~ 262 (272)
... .|+.+++.+|..+.
T Consensus 198 ~~~---~g~~~~i~~~~~~s 214 (286)
T 3ius_A 198 RPD---PGAVYNVCDDEPVP 214 (286)
T ss_dssp SCC---TTCEEEECCSCCBC
T ss_pred CCC---CCCEEEEeCCCCcc
Confidence 543 68999999887654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=143.76 Aligned_cols=201 Identities=14% Similarity=0.070 Sum_probs=135.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh----HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE----VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
++.++||||||+|+||++++++|+++|++|++++|+. ++.+ ..+.+.. ..+.++.+|++|.+++.+++++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~--- 81 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKE--- 81 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHH---
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhh---
Confidence 3467999999999999999999999999999999976 3333 2223333 3567789999999999888864
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCC----CCCCCCh
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGL----SHVGSGS 165 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~----~~~~~~~ 165 (272)
.++|+|||+++.. |+.+..++++++ ++.+ ..++|. |+.... .+..+..
T Consensus 82 ---~~~d~Vi~~a~~~-------------------n~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~e~~~~~p~~ 134 (346)
T 3i6i_A 82 ---HEIDIVVSTVGGE-------------------SILDQIALVKAM----KAVGTIKRFLP-SEFGHDVNRADPVEPGL 134 (346)
T ss_dssp ---TTCCEEEECCCGG-------------------GGGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTTCCCCTTHH
T ss_pred ---CCCCEEEECCchh-------------------hHHHHHHHHHHH----HHcCCceEEee-cccCCCCCccCcCCCcc
Confidence 2699999999861 778887777776 4444 567765 443321 1234557
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH------HHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE------FVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
.|+.+|.+++.+.+. .++.+..++||++.......+..... .............+..++|+++.++.
T Consensus 135 ~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~ 207 (346)
T 3i6i_A 135 NMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMK 207 (346)
T ss_dssp HHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHH
Confidence 899999999887764 48999999999887654322111000 00000001112345689999999999
Q ss_pred HhcCCCCCccccEEEeCC
Q 024125 240 LCLPAASYITGQIISVDG 257 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dg 257 (272)
++.... ..|+.+++-|
T Consensus 208 ~l~~~~--~~~~~~~i~g 223 (346)
T 3i6i_A 208 TVDDVR--TLNKSVHFRP 223 (346)
T ss_dssp HTTCGG--GTTEEEECCC
T ss_pred HHhCcc--ccCeEEEEeC
Confidence 986532 3367777653
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-17 Score=143.45 Aligned_cols=196 Identities=13% Similarity=0.100 Sum_probs=127.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-----HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-----VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++||||||+|+||++++++|+++|++|++++|+. ....+..+.+... .+.++.+|++|.+++.+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~--~v~~v~~D~~d~~~l~~a~------ 75 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSM--GVTIIEGEMEEHEKMVSVL------ 75 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHT--TCEEEECCTTCHHHHHHHH------
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcC--CcEEEEecCCCHHHHHHHH------
Confidence 46799999999999999999999999999999985 1222222333332 4667899999999888777
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCC---C---CCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSH---V---GSG 164 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~---~---~~~ 164 (272)
..+|+||||++... +.+. +.+++.+++.+ .++|| .|..+... . +..
T Consensus 76 --~~~d~vi~~a~~~~-------------------~~~~----~~l~~aa~~~g~v~~~v--~S~~g~~~~~~~~~~p~~ 128 (321)
T 3c1o_A 76 --KQVDIVISALPFPM-------------------ISSQ----IHIINAIKAAGNIKRFL--PSDFGCEEDRIKPLPPFE 128 (321)
T ss_dssp --TTCSEEEECCCGGG-------------------SGGG----HHHHHHHHHHCCCCEEE--CSCCSSCGGGCCCCHHHH
T ss_pred --cCCCEEEECCCccc-------------------hhhH----HHHHHHHHHhCCccEEe--ccccccCccccccCCCcc
Confidence 35999999998521 2333 34444445555 56887 34333211 1 113
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC------HHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN------KEFVDKVIARTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~e~a~~~~ 238 (272)
..| .+|.+++.+++. .+++++.++||++.+.....+... ...............+.+++|+++.+.
T Consensus 129 ~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 200 (321)
T 3c1o_A 129 SVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTI 200 (321)
T ss_dssp HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHH
T ss_pred hHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHH
Confidence 579 999999988753 268888999998876554322110 000000000011123468999999999
Q ss_pred HHhcCCCCCccccEEEeCC
Q 024125 239 YLCLPAASYITGQIISVDG 257 (272)
Q Consensus 239 ~l~~~~~~~~~G~~i~~dg 257 (272)
.++.... ..|+.+.+.|
T Consensus 201 ~~l~~~~--~~g~~~~~~g 217 (321)
T 3c1o_A 201 KVACDPR--CCNRIVIYRP 217 (321)
T ss_dssp HHHHCGG--GTTEEEECCC
T ss_pred HHHhCcc--ccCeEEEEeC
Confidence 9986533 2388888875
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-16 Score=139.60 Aligned_cols=214 Identities=13% Similarity=0.113 Sum_probs=140.9
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-----CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLG-----AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+|+||||||+|+||++++++|+++| ++|++++|+..... ....++.++.+|++|.+++.++++.+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 70 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL--- 70 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence 4789999999999999999999999 99999999765422 11235778899999999887776421
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEE-------EecCCCCCCCC---
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIV-------FISSVGGLSHV--- 161 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii-------~vsS~~~~~~~--- 161 (272)
.++|+|||+|+... ++.+..+++|+.++.++++++.+.. .+..++| ++||...+...
T Consensus 71 --~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~ 137 (364)
T 2v6g_A 71 --TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESH 137 (364)
T ss_dssp --TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred --CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccC
Confidence 24999999999642 2356788999999999999874421 1345776 68886433211
Q ss_pred -----------CCChhhHHHHHHHHHHHHHHHHHHccCC-eeEEEeeCCcccChhhHhhhh--CHH-HHHHH--HhcCCC
Q 024125 162 -----------GSGSIYGATKAAMNQLTRNLACEWAKDN-IRTNSVAPWYTKTSLVERLLE--NKE-FVDKV--IARTPL 224 (272)
Q Consensus 162 -----------~~~~~Y~~sK~a~~~~~~~la~el~~~~-i~v~~v~PG~v~t~~~~~~~~--~~~-~~~~~--~~~~~~ 224 (272)
+....| .+.+.+++.++. ..+ +++..++|+.+..+....... .+. ..... ....+.
T Consensus 138 ~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~ 210 (364)
T 2v6g_A 138 DPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVL 210 (364)
T ss_dssp CSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCB
T ss_pred CCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCce
Confidence 113356 234555544432 245 999999999887754321110 011 12222 122221
Q ss_pred C------------CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 225 Q------------RVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 225 ~------------~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
. ...+++|++++++.++... ...|+.+++.+|..++
T Consensus 211 ~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~s 258 (364)
T 2v6g_A 211 RFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVFK 258 (364)
T ss_dssp CCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCBC
T ss_pred ecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcCC
Confidence 1 2234588999999888532 2368999999886544
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=6e-17 Score=139.12 Aligned_cols=200 Identities=11% Similarity=0.078 Sum_probs=130.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-----HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-----VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++||||||+|+||++++++|+++|++|++++|+. ++.+.+ +.+.. ..+.++.+|++|.+++.+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~--~~~~~~~~D~~d~~~l~~~~------ 74 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFKQ--LGAKLIEASLDDHQRLVDAL------ 74 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHHT--TTCEEECCCSSCHHHHHHHH------
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHHh--CCeEEEeCCCCCHHHHHHHH------
Confidence 46899999999999999999999999999999983 333322 23332 34677899999999887777
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCC------CCCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSH------VGSG 164 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~------~~~~ 164 (272)
..+|+|||+++..... .|+.+..++++++ ++.+ .+++|+ |+...... .+..
T Consensus 75 --~~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (313)
T 1qyd_A 75 --KQVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGS 132 (313)
T ss_dssp --TTCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTT
T ss_pred --hCCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCc
Confidence 3699999999964321 1455555555544 5565 678875 43321111 1335
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH-------HHHHHHHhcCCCCCCCCHHHHHHHH
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK-------EFVDKVIARTPLQRVGEPEEVASLV 237 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~e~a~~~ 237 (272)
..| .+|.+++.+.+. .+++++.++||++.+.+...+.... ..............+.+++|+++.+
T Consensus 133 ~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~ 204 (313)
T 1qyd_A 133 ITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYT 204 (313)
T ss_dssp HHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHH
T ss_pred chH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHH
Confidence 678 999999887752 4788999999988665433221100 0000000000112345799999999
Q ss_pred HHHhcCCCCCccccEEEeCC
Q 024125 238 AYLCLPAASYITGQIISVDG 257 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dg 257 (272)
..++.... ..|+.+.+.|
T Consensus 205 ~~~l~~~~--~~~~~~~~~g 222 (313)
T 1qyd_A 205 IKSIDDPQ--TLNKTMYIRP 222 (313)
T ss_dssp HHHTTCGG--GSSSEEECCC
T ss_pred HHHHhCcc--cCCceEEEeC
Confidence 99986432 2377777765
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=5.3e-17 Score=139.97 Aligned_cols=197 Identities=13% Similarity=0.116 Sum_probs=125.9
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.|+||||||+|+||++++++|+++|++|++++|+.+...+..+++... .+.++.+|++|.+++.+++ ..+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~--~v~~v~~Dl~d~~~l~~a~--------~~~ 80 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL--GAIIVKGELDEHEKLVELM--------KKV 80 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT--TCEEEECCTTCHHHHHHHH--------TTC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC--CCEEEEecCCCHHHHHHHH--------cCC
Confidence 368999999999999999999999999999999875222222333333 3567899999999888777 359
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCC--C---CCChhhHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSH--V---GSGSIYGAT 170 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~--~---~~~~~Y~~s 170 (272)
|+|||+++... +.+. +.+++.+++.+ .+++|+ |+...... . +....| .+
T Consensus 81 d~vi~~a~~~~-------------------~~~~----~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~s 135 (318)
T 2r6j_A 81 DVVISALAFPQ-------------------ILDQ----FKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPFEALI-ER 135 (318)
T ss_dssp SEEEECCCGGG-------------------STTH----HHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HH
T ss_pred CEEEECCchhh-------------------hHHH----HHHHHHHHhcCCCCEEEe-eccccCcccccCCCCcchhH-HH
Confidence 99999998521 2223 34444445555 567774 43321111 1 113468 99
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH---HHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK---EFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
|.+++.+.+. .++.+..++||++...+...+.... ..............+.+++|+++.+..++....
T Consensus 136 K~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-- 206 (318)
T 2r6j_A 136 KRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR-- 206 (318)
T ss_dssp HHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG--
T ss_pred HHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc--
Confidence 9999887753 4788999999987665433221100 000000000111234579999999999986532
Q ss_pred ccccEEEeCC
Q 024125 248 ITGQIISVDG 257 (272)
Q Consensus 248 ~~G~~i~~dg 257 (272)
..|+.+.+.|
T Consensus 207 ~~~~~~~~~g 216 (318)
T 2r6j_A 207 ALNRVVIYRP 216 (318)
T ss_dssp GTTEEEECCC
T ss_pred ccCeEEEecC
Confidence 2367777764
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.6e-16 Score=143.71 Aligned_cols=206 Identities=15% Similarity=0.119 Sum_probs=137.5
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+++||||||+|+||++++++|+++|++|++++|+..+.+ .+.+|+.+. . .+.+ .++
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------------~v~~d~~~~--~-------~~~l-~~~ 202 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------------KRFWDPLNP--A-------SDLL-DGA 202 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------------CEECCTTSC--C-------TTTT-TTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------------ceeecccch--h-------HHhc-CCC
Confidence 689999999999999999999999999999999865421 145676532 1 1122 479
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CCCCCh
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGS 165 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~~~~~ 165 (272)
|+|||||+..... .++.+..+..+++|+.++.++++++. ++.+.+++|++||...+. ...+..
T Consensus 203 D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~ 276 (516)
T 3oh8_A 203 DVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDD 276 (516)
T ss_dssp SEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred CEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence 9999999974332 34556678899999999999999743 344557999999976543 112456
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhc--CCC------CCCCCHHHHHHHH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR--TPL------QRVGEPEEVASLV 237 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~e~a~~~ 237 (272)
.|+.+|...+.+.+. +...|++++.+.||.+.++....+ .......... ... ..+..++|+++++
T Consensus 277 ~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~~~---~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai 349 (516)
T 3oh8_A 277 FLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGGML---PLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIY 349 (516)
T ss_dssp HHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBSHH---HHHHHTTC---CCCCTTSCCEECEEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCChH---HHHHHHHHhCCCcccCCCCceEceEeHHHHHHHH
Confidence 788888887766433 344689999999999988642100 0111111000 011 1345689999999
Q ss_pred HHHhcCCCCCccccEEEeCCCcCCC
Q 024125 238 AYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+.++.... ..| .+++.++..+.
T Consensus 350 ~~~l~~~~--~~g-~~ni~~~~~~s 371 (516)
T 3oh8_A 350 YRAIVDAQ--ISG-PINAVAPNPVS 371 (516)
T ss_dssp HHHHHCTT--CCE-EEEESCSCCEE
T ss_pred HHHHhCcc--cCC-cEEEECCCCCC
Confidence 99986432 334 56777765443
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.6e-16 Score=136.19 Aligned_cols=197 Identities=14% Similarity=0.126 Sum_probs=125.2
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-----HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-----ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++|+||||+|+||++++++|+++|++|++++|+.. ...+..+.+.. ..+.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d~~~l~~~~~----- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK----- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh--CCCEEEEeccCCHHHHHHHHc-----
Confidence 478999999999999999999999999999999742 11222233332 346678999999998887774
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCC----C-CCCCh
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS----H-VGSGS 165 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~----~-~~~~~ 165 (272)
.+|+|||+++... +.+..+ +++.+++.+ .+++|. |+..... + .+...
T Consensus 77 ---~~d~vi~~a~~~~-------------------~~~~~~----l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~ 129 (308)
T 1qyc_A 77 ---NVDVVISTVGSLQ-------------------IESQVN----IIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKS 129 (308)
T ss_dssp ---TCSEEEECCCGGG-------------------SGGGHH----HHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHH
T ss_pred ---CCCEEEECCcchh-------------------hhhHHH----HHHHHHhcCCCceEee-cccccCccccccCCcchh
Confidence 5899999998521 223333 344445555 578873 4433111 1 12235
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH------HHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK------EFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
.| .+|.+++.+.+. .+++++.+.||++.+.+...+.... ..............+.+++|+++.+..
T Consensus 130 ~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 201 (308)
T 1qyc_A 130 VF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIK 201 (308)
T ss_dssp HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHT
T ss_pred HH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHH
Confidence 78 999999887753 2688889999988665432221100 000000000111234578999999998
Q ss_pred HhcCCCCCccccEEEeCC
Q 024125 240 LCLPAASYITGQIISVDG 257 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dg 257 (272)
++.... ..|+.+.+.|
T Consensus 202 ~l~~~~--~~~~~~~~~g 217 (308)
T 1qyc_A 202 AVDDPR--TLNKTLYLRL 217 (308)
T ss_dssp TSSCGG--GTTEEEECCC
T ss_pred HHhCcc--ccCeEEEEeC
Confidence 886432 2377777765
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.6e-13 Score=114.20 Aligned_cols=205 Identities=17% Similarity=0.138 Sum_probs=128.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++||||||+|+||++++++|.++|++|++++|++.. .++. .| .. . .+.+ ..+|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~~~---~~-----~~---~---~~~l-~~~d 53 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GRIT---WD-----EL---A---ASGL-PSCD 53 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TEEE---HH-----HH---H---HHCC-CSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Ceee---cc-----hh---h---Hhhc-cCCC
Confidence 469999999999999999999999999999997532 1221 11 11 0 1123 5799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----------CCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----------~~~~~~ 166 (272)
.+||+|+.........++....+..++.|+.++-++.+++.. ...+..++|+.||...+.. ..+...
T Consensus 54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~--~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~ 131 (298)
T 4b4o_A 54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITK--APQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDF 131 (298)
T ss_dssp EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH--CSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSH
T ss_pred EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHH--hCCCceEEEEEeeeeeecCCCCCcccccCCccccch
Confidence 999999865445555567777788899999998877776532 1223345777777654322 222344
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhc--CC------CCCCCCHHHHHHHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR--TP------LQRVGEPEEVASLVA 238 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~e~a~~~~ 238 (272)
|+..|...+.. ......++++..+.||.+..+-...+ .......... .+ ...+..++|+++++.
T Consensus 132 ~~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~~---~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~ 203 (298)
T 4b4o_A 132 FSNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGAM---GHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILT 203 (298)
T ss_dssp HHHHHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSHHH---HHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHH
T ss_pred hHHHHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCCch---hHHHHHHhcCCcceecccCceeecCcHHHHHHHHH
Confidence 55555444331 23355689999999998877642211 1111111111 11 112345899999999
Q ss_pred HHhcCCCCCccccEEEeCCCcCCC
Q 024125 239 YLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 239 ~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
.++... ...| .+++.++..+.
T Consensus 204 ~~~~~~--~~~g-~yn~~~~~~~t 224 (298)
T 4b4o_A 204 HALEAN--HVHG-VLNGVAPSSAT 224 (298)
T ss_dssp HHHHCT--TCCE-EEEESCSCCCB
T ss_pred HHHhCC--CCCC-eEEEECCCccC
Confidence 888543 2345 78887776543
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=3.7e-12 Score=110.25 Aligned_cols=162 Identities=10% Similarity=0.071 Sum_probs=106.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCCh--HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
++|+||||+|+||++++..|+++|. +|+++++.. ++.+....++......+. .|+++.++..+.+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~---~di~~~~~~~~a~--- 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL---AGLEATDDPKVAF--- 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE---EEEEEESCHHHHT---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc---CCeEeccChHHHh---
Confidence 5799999999999999999999986 899999864 333333334433221221 3444333333333
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC--------CC-
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG--------LS- 159 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~--------~~- 159 (272)
...|+|||+||..... ..+ ..+.+++|+.++.++++++..+- ....+++++|+... ..
T Consensus 79 -----~~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~ 145 (327)
T 1y7t_A 79 -----KDADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAP 145 (327)
T ss_dssp -----TTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred -----CCCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcC
Confidence 4699999999974321 122 34678999999999888875431 13358888888641 11
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccC--Cee-EEEeeCC
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKD--NIR-TNSVAPW 198 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~--~i~-v~~v~PG 198 (272)
+.++...|+.+|...+.+.+.+++.++-. .+| ++.+-|+
T Consensus 146 ~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h 187 (327)
T 1y7t_A 146 GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNH 187 (327)
T ss_dssp TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCS
T ss_pred CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCC
Confidence 24455679999999999999998876332 344 2445553
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=7.2e-12 Score=106.49 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=81.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|++|||||+||+|+++++.|+++|++|++++|+.++.+++.+++... ..+.+..+|+++.+++++++
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~------- 186 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV------- 186 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT-------
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHH-------
Confidence 4578999999999999999999999999999999999999888888777542 12455678999998877666
Q ss_pred CCCccEEEECCCCCCCC-CCCCCCH-HHHHHHHHHHhHHHH
Q 024125 93 NGKLNILVNNVGTNIRK-PTIEYSA-EEYSKIMTTNFESTY 131 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~-~~~~~~~-~~~~~~~~~N~~~~~ 131 (272)
..+|+||||+|..... ++.+.+. ++++..+++|+.+++
T Consensus 187 -~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 187 -KGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp -TTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred -HhCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 3589999999864321 1111111 233345566665554
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.4e-10 Score=92.00 Aligned_cols=152 Identities=14% Similarity=0.093 Sum_probs=90.3
Q ss_pred CCCCCEEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC
Q 024125 14 SLKGMTALVTGG----------------TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77 (272)
Q Consensus 14 ~l~~k~vlItGa----------------~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 77 (272)
+++||+|||||| +|+||+++|+.|+++|++|++++++.. ++ .. .. ...+|+++
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-------~~-~g--~~~~dv~~ 73 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-------TP-PF--VKRVDVMT 73 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-------CC-TT--EEEEECCS
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-------cC-CC--CeEEccCc
Confidence 588999999999 699999999999999999999887542 11 01 11 13568877
Q ss_pred HHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHH--HHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecC
Q 024125 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI--MTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (272)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~--~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS 154 (272)
.++ +++.+.+.+ +++|++|||||+....+.. .+.+.+.+. -+.++.-.+..+.-+++.+.+. ..+.+ .|+
T Consensus 74 ~~~---~~~~v~~~~-~~~Dili~~Aav~d~~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~-~VG- 146 (226)
T 1u7z_A 74 ALE---MEAAVNASV-QQQNIFIGCAAVADYRAAT-VAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY-VVG- 146 (226)
T ss_dssp HHH---HHHHHHHHG-GGCSEEEECCBCCSEEESS-CCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE-EEE-
T ss_pred HHH---HHHHHHHhc-CCCCEEEECCcccCCCCcc-CChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcE-EEE-
Confidence 655 566666777 6899999999986444432 222223330 0223222333333455555543 22332 222
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCC
Q 024125 155 VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198 (272)
Q Consensus 155 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG 198 (272)
.... . +.+.+....+|..+|+.+.+.+|-
T Consensus 147 FaaE---------t------~~l~e~A~~kL~~k~~d~ivaN~~ 175 (226)
T 1u7z_A 147 FAAE---------T------NNVEEYARQKRIRKNLDLICANDV 175 (226)
T ss_dssp EEEE---------S------SSHHHHHHHHHHHHTCSEEEEEEC
T ss_pred cchh---------h------chHHHHHHHHHHhcCCCEEEEeec
Confidence 1111 0 235556667777778777666664
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.97 E-value=4.4e-09 Score=76.45 Aligned_cols=74 Identities=18% Similarity=0.150 Sum_probs=61.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.+++++|+|+ |++|+++++.|.++| ++|++++|+.++.+.+. . ..+....+|+++.+++.+++ .
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~--------~ 68 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--MGVATKQVDAKDEAGLAKAL--------G 68 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--TTCEEEECCTTCHHHHHHHT--------T
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--CCCcEEEecCCCHHHHHHHH--------c
Confidence 4579999999 999999999999999 89999999988776554 2 23456789999988776665 4
Q ss_pred CccEEEECCC
Q 024125 95 KLNILVNNVG 104 (272)
Q Consensus 95 ~id~li~~ag 104 (272)
.+|++|++++
T Consensus 69 ~~d~vi~~~~ 78 (118)
T 3ic5_A 69 GFDAVISAAP 78 (118)
T ss_dssp TCSEEEECSC
T ss_pred CCCEEEECCC
Confidence 6999999996
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.9e-10 Score=92.57 Aligned_cols=91 Identities=20% Similarity=0.251 Sum_probs=63.4
Q ss_pred CCCEEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHH
Q 024125 16 KGMTALVTGG----------------TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79 (272)
Q Consensus 16 ~~k~vlItGa----------------~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 79 (272)
+||+|||||| +|++|.++|+.|+++|++|++++|...... .....+ ...|++
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~~~~--~~~~v~--- 69 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPHPNL--SIREIT--- 69 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCCTTE--EEEECC---
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCCCCe--EEEEHh---
Confidence 5899999999 788999999999999999999998653210 001122 234554
Q ss_pred HHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHH
Q 024125 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119 (272)
Q Consensus 80 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~ 119 (272)
+++++++.+.+.+ +++|++|+||++....+....+.+++
T Consensus 70 s~~em~~~v~~~~-~~~Dili~aAAvsD~~p~~~~~~e~~ 108 (232)
T 2gk4_A 70 NTKDLLIEMQERV-QDYQVLIHSMAVSDYTPVYMTGLEEV 108 (232)
T ss_dssp SHHHHHHHHHHHG-GGCSEEEECSBCCSEEEEEEEEHHHH
T ss_pred HHHHHHHHHHHhc-CCCCEEEEcCccccccchhhcchhhh
Confidence 4555666777777 68999999999866555443344443
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.79 E-value=4.9e-08 Score=86.76 Aligned_cols=81 Identities=22% Similarity=0.206 Sum_probs=69.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCC---CEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLG---AVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++|+|+|+ |+||+++++.|+++| .+|++++|+.++.+++.+++... +.++..+.+|+++.+++++++++.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence 57999999 899999999999998 48999999999999988887653 235778899999999999888764
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
++|+||||++.
T Consensus 76 -~~DvVin~ag~ 86 (405)
T 4ina_A 76 -KPQIVLNIALP 86 (405)
T ss_dssp -CCSEEEECSCG
T ss_pred -CCCEEEECCCc
Confidence 59999999984
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=7.8e-12 Score=112.10 Aligned_cols=46 Identities=20% Similarity=0.208 Sum_probs=40.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~ 59 (272)
+.+.||+++|||++ +||+++++.|...|++|+++++++.+..+...
T Consensus 261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~ 306 (488)
T 3ond_A 261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM 306 (488)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 45899999999987 99999999999999999999999877665443
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=9.6e-09 Score=79.20 Aligned_cols=77 Identities=16% Similarity=0.089 Sum_probs=63.9
Q ss_pred ChHHHHHHHHHHHCCCEEEEeeCChHHHH---HHHHHHHhCCCeEEEEEecCCCH--HHHHHHHHHHHHHcCCCccEEEE
Q 024125 27 RGIGQATVEELAGLGAVVHTCSRNEVELN---KCLKEWQSKGFVVSGSVCDAASP--DQREKLIQEVGSKFNGKLNILVN 101 (272)
Q Consensus 27 ~giG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~id~li~ 101 (272)
+-++.++++.|++.|++|++..|+.+..+ +..+.+.+.+.++..+++|++++ ++++++++.+.+.+ ++ |++||
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLVn 103 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLVH 103 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEEE
Confidence 34779999999999999999888654432 23455666688888999999999 99999999999888 67 99999
Q ss_pred CCCC
Q 024125 102 NVGT 105 (272)
Q Consensus 102 ~ag~ 105 (272)
|||.
T Consensus 104 nAgg 107 (157)
T 3gxh_A 104 CLAN 107 (157)
T ss_dssp CSBS
T ss_pred CCCC
Confidence 9996
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.68 E-value=3.7e-08 Score=86.43 Aligned_cols=107 Identities=18% Similarity=0.181 Sum_probs=74.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++++|+|+|+ |+||+++++.+...|++|++++|+.++++...+.+ +.. +.+|.++.+++++.+
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~-------- 227 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSV-------- 227 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHH--------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHH--------
Confidence 588999999999 99999999999999999999999998876655433 223 345777777766655
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|+|++..... .+..+.+..++.|+ +.++||++++..
T Consensus 228 ~~~DvVi~~~g~~~~~-------------------~~~li~~~~l~~mk--~gg~iV~v~~~~ 269 (369)
T 2eez_A 228 QHADLLIGAVLVPGAK-------------------APKLVTRDMLSLMK--EGAVIVDVAVDQ 269 (369)
T ss_dssp HHCSEEEECCC--------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred hCCCEEEECCCCCccc-------------------cchhHHHHHHHhhc--CCCEEEEEecCC
Confidence 2589999999863210 01223456666674 347999999754
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-07 Score=75.84 Aligned_cols=103 Identities=19% Similarity=0.257 Sum_probs=70.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++||||||+||||+++++.+...|++|++++|++++.+... +.+... ..|.++.+..+.+.+... +++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~~---~~d~~~~~~~~~~~~~~~---~~~ 107 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVEY---VGDSRSVDFADEILELTD---GYG 107 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCSE---EEETTCSTHHHHHHHHTT---TCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCE---EeeCCcHHHHHHHHHHhC---CCC
Confidence 5899999999999999999999999999999999887765432 233332 246666544333333221 136
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
+|++|+|+|. +. .+..++.++. .|+++++++..
T Consensus 108 ~D~vi~~~g~-----------~~---------------~~~~~~~l~~--~G~~v~~g~~~ 140 (198)
T 1pqw_A 108 VDVVLNSLAG-----------EA---------------IQRGVQILAP--GGRFIELGKKD 140 (198)
T ss_dssp EEEEEECCCT-----------HH---------------HHHHHHTEEE--EEEEEECSCGG
T ss_pred CeEEEECCch-----------HH---------------HHHHHHHhcc--CCEEEEEcCCC
Confidence 9999999972 10 2344555544 37999998754
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.61 E-value=8.5e-08 Score=86.26 Aligned_cols=77 Identities=13% Similarity=0.105 Sum_probs=62.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++|+|+|+| +|++|+++++.|++.|++|++++|+.++.+++.+++ ..+..+.+|+++.+++.+++ ..
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l--------~~ 68 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEV--------AK 68 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHH--------TT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHH--------cC
Confidence 468999998 799999999999999999999999987765544322 23567789999998877766 36
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|+||||++.
T Consensus 69 ~DvVIn~a~~ 78 (450)
T 1ff9_A 69 HDLVISLIPY 78 (450)
T ss_dssp SSEEEECCC-
T ss_pred CcEEEECCcc
Confidence 9999999985
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=5.5e-07 Score=76.97 Aligned_cols=84 Identities=20% Similarity=0.229 Sum_probs=65.5
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC---hHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN---EVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~---~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
..++++|++||+|+ ||+|++++..|++.|+ +|+++.|+ .++.+++.+++... +..+ ...++.+.+++.+.+
T Consensus 149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~--~~~~~~~~~~l~~~l- 224 (315)
T 3tnl_A 149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKA--QLFDIEDHEQLRKEI- 224 (315)
T ss_dssp TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEE--EEEETTCHHHHHHHH-
T ss_pred CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCce--EEeccchHHHHHhhh-
Confidence 35689999999998 7999999999999999 89999999 88888888887653 3233 344666666554443
Q ss_pred HHHHHcCCCccEEEECCCCC
Q 024125 87 EVGSKFNGKLNILVNNVGTN 106 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~ 106 (272)
...|+|||+....
T Consensus 225 -------~~aDiIINaTp~G 237 (315)
T 3tnl_A 225 -------AESVIFTNATGVG 237 (315)
T ss_dssp -------HTCSEEEECSSTT
T ss_pred -------cCCCEEEECccCC
Confidence 3689999998754
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.57 E-value=2.5e-08 Score=84.53 Aligned_cols=82 Identities=17% Similarity=0.141 Sum_probs=59.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|+++|||++ |+|+++++.|++.| +|++++|+.++.+++.+++.........+.+|+++. .+.+
T Consensus 124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~ 191 (287)
T 1nvt_A 124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL 191 (287)
T ss_dssp CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC
T ss_pred CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh
Confidence 35789999999997 99999999999999 999999999988888777653210000012333331 2223
Q ss_pred CCCccEEEECCCCCC
Q 024125 93 NGKLNILVNNVGTNI 107 (272)
Q Consensus 93 ~~~id~li~~ag~~~ 107 (272)
+++|+||||++...
T Consensus 192 -~~~DilVn~ag~~~ 205 (287)
T 1nvt_A 192 -DGVDIIINATPIGM 205 (287)
T ss_dssp -TTCCEEEECSCTTC
T ss_pred -CCCCEEEECCCCCC
Confidence 67999999999754
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1.5e-07 Score=81.21 Aligned_cols=79 Identities=18% Similarity=0.252 Sum_probs=59.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|+++||||++||||+++++.+...|++|++++|++++.+.. +++ +... .+|.++.+++.+.+.++. .++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~~---~~d~~~~~~~~~~~~~~~---~~~ 214 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFDA---AFNYKTVNSLEEALKKAS---PDG 214 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTSCSCHHHHHHHHC---TTC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCcE---EEecCCHHHHHHHHHHHh---CCC
Confidence 589999999999999999999999999999999998877655 333 3332 246665334444444432 247
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++|+|+|
T Consensus 215 ~d~vi~~~g 223 (333)
T 1v3u_A 215 YDCYFDNVG 223 (333)
T ss_dssp EEEEEESSC
T ss_pred CeEEEECCC
Confidence 999999998
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.54 E-value=8e-07 Score=76.68 Aligned_cols=152 Identities=9% Similarity=0.050 Sum_probs=98.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCC----hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRN----EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 85 (272)
.++|+||||+|++|++++..|+.+|. +|++++++ +++.+....++.+....+. .|++...+..+.+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al 81 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF 81 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh
Confidence 36899999999999999999999885 79999998 6656655555554211111 1222222222223
Q ss_pred HHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC--------
Q 024125 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG-------- 157 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~-------- 157 (272)
...|+|||+||..... ..+. ...+..|+.....+++.+..+- .+.++||++|....
T Consensus 82 --------~~aD~Vi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~ 145 (329)
T 1b8p_A 82 --------KDADVALLVGARPRGP---GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMK 145 (329)
T ss_dssp --------TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHH
T ss_pred --------CCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHH
Confidence 4689999999974321 1222 3467888888887777764421 14579999998552
Q ss_pred CC-CCCCChhhHHHHHHHHHHHHHHHHHHcc
Q 024125 158 LS-HVGSGSIYGATKAAMNQLTRNLACEWAK 187 (272)
Q Consensus 158 ~~-~~~~~~~Y~~sK~a~~~~~~~la~el~~ 187 (272)
.. +++....|+.++.--..+...+++.+.-
T Consensus 146 ~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv 176 (329)
T 1b8p_A 146 SAPSLPAKNFTAMLRLDHNRALSQIAAKTGK 176 (329)
T ss_dssp TCTTSCGGGEEECCHHHHHHHHHHHHHHHTC
T ss_pred HcCCCCHHHEEEeecHHHHHHHHHHHHHhCc
Confidence 22 3344455888776666777778887743
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.2e-08 Score=93.64 Aligned_cols=98 Identities=15% Similarity=0.173 Sum_probs=64.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc-
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF- 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 92 (272)
++++|++||||| ||+|++++++|++.|++|++++|+.++.+++.+++. .++. ++.+. +.+
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~----~~~dl-----------~~~~ 421 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKAL----SLTDL-----------DNYH 421 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CE----ETTTT-----------TTC-
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Ccee----eHHHh-----------hhcc
Confidence 578999999999 599999999999999999999999998888776652 2221 22221 111
Q ss_pred CCCccEEEECCCCCCC-----CCCCCCCHHHHHHHHHHHhHHH
Q 024125 93 NGKLNILVNNVGTNIR-----KPTIEYSAEEYSKIMTTNFEST 130 (272)
Q Consensus 93 ~~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~N~~~~ 130 (272)
...+|++|||+|+... .++.+.+.+++...+++|+.+.
T Consensus 422 ~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~ 464 (523)
T 2o7s_A 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR 464 (523)
T ss_dssp -CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred ccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence 1358999999997432 2444445555666677776654
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.45 E-value=3.8e-07 Score=82.27 Aligned_cols=79 Identities=14% Similarity=0.146 Sum_probs=61.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++++|+|+|+ |++|+++++.|++. |.+|++++|+.++.+++.+. . .+..+.+|+++.+++.++++
T Consensus 19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~--~~~~~~~D~~d~~~l~~~l~----- 87 (467)
T 2axq_A 19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---S--GSKAISLDVTDDSALDKVLA----- 87 (467)
T ss_dssp ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---G--TCEEEECCTTCHHHHHHHHH-----
T ss_pred cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---c--CCcEEEEecCCHHHHHHHHc-----
Confidence 4577899999997 99999999999998 67999999998887766543 1 24456789999888766652
Q ss_pred cCCCccEEEECCCC
Q 024125 92 FNGKLNILVNNVGT 105 (272)
Q Consensus 92 ~~~~id~li~~ag~ 105 (272)
.+|+||||++.
T Consensus 88 ---~~DvVIn~tp~ 98 (467)
T 2axq_A 88 ---DNDVVISLIPY 98 (467)
T ss_dssp ---TSSEEEECSCG
T ss_pred ---CCCEEEECCch
Confidence 58999999985
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=98.38 E-value=3.3e-06 Score=75.84 Aligned_cols=110 Identities=16% Similarity=0.196 Sum_probs=75.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCC-----------CHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA-----------SPDQREKL 84 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----------~~~~~~~~ 84 (272)
.|++|||+|++|+||.++++.+...|++|+++++++++++... +.+....+...|.. +.++++++
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR----ALGCDLVINRAELGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCCEEEecccccccccccccccccchhhhHH
Confidence 5899999999999999999999999999999999888776543 23333333322211 23455556
Q ss_pred HHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 85 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
.+++.+..+..+|++|+|+|. +. .+..++.++ +.|+++++++..+
T Consensus 296 ~~~v~~~~g~g~Dvvid~~G~-----------~~---------------~~~~~~~l~--~~G~iv~~G~~~~ 340 (447)
T 4a0s_A 296 AKLVVEKAGREPDIVFEHTGR-----------VT---------------FGLSVIVAR--RGGTVVTCGSSSG 340 (447)
T ss_dssp HHHHHHHHSSCCSEEEECSCH-----------HH---------------HHHHHHHSC--TTCEEEESCCTTC
T ss_pred HHHHHHHhCCCceEEEECCCc-----------hH---------------HHHHHHHHh--cCCEEEEEecCCC
Confidence 666666664469999999982 11 133444443 4489999987654
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-06 Score=73.57 Aligned_cols=78 Identities=17% Similarity=0.319 Sum_probs=59.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++.+++.+++...+ .+ ...|. +++ .+
T Consensus 115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~--~~~~~---~~~-------~~-- 178 (271)
T 1nyt_A 115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SI--QALSM---DEL-------EG-- 178 (271)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SE--EECCS---GGG-------TT--
T ss_pred cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Ce--eEecH---HHh-------cc--
Confidence 3578999999998 799999999999999999999999999888877764322 22 12332 111 11
Q ss_pred CCCccEEEECCCCCC
Q 024125 93 NGKLNILVNNVGTNI 107 (272)
Q Consensus 93 ~~~id~li~~ag~~~ 107 (272)
+..|+||||++...
T Consensus 179 -~~~DivVn~t~~~~ 192 (271)
T 1nyt_A 179 -HEFDLIINATSSGI 192 (271)
T ss_dssp -CCCSEEEECCSCGG
T ss_pred -CCCCEEEECCCCCC
Confidence 37999999999743
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=4.6e-07 Score=67.93 Aligned_cols=77 Identities=21% Similarity=0.283 Sum_probs=56.9
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+++++++|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+. ..+ ...+..|.++.+.++++ .. .
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~~--~~~~~~d~~~~~~l~~~------~~-~ 69 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSL------GI-R 69 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TTC--SEEEECCTTCHHHHHTT------TG-G
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhC--CEEEEeCCCCHHHHHhc------CC-C
Confidence 56788999998 99999999999999999999999887654332 222 24467888887655432 12 4
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
+.|++|++++.
T Consensus 70 ~~d~vi~~~~~ 80 (144)
T 2hmt_A 70 NFEYVIVAIGA 80 (144)
T ss_dssp GCSEEEECCCS
T ss_pred CCCEEEECCCC
Confidence 69999999874
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.8e-06 Score=75.01 Aligned_cols=104 Identities=15% Similarity=0.145 Sum_probs=72.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+|++|+||+++++.+...|++|++++|++++.+... + .+... ..|.++.+++.+.+.++.. ++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~---~g~~~---~~d~~~~~~~~~~~~~~~~---~~ 238 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S---IGGEV---FIDFTKEKDIVGAVLKATD---GG 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-H---TTCCE---EEETTTCSCHHHHHHHHHT---SC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-H---cCCce---EEecCccHhHHHHHHHHhC---CC
Confidence 5899999999999999999999999999999999887764332 2 23332 2476654455555554432 36
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
+|++|+|+|. .+ .++.+++.++. .|+++++++..
T Consensus 239 ~D~vi~~~g~----------~~---------------~~~~~~~~l~~--~G~iv~~g~~~ 272 (347)
T 2hcy_A 239 AHGVINVSVS----------EA---------------AIEASTRYVRA--NGTTVLVGMPA 272 (347)
T ss_dssp EEEEEECSSC----------HH---------------HHHHHTTSEEE--EEEEEECCCCT
T ss_pred CCEEEECCCc----------HH---------------HHHHHHHHHhc--CCEEEEEeCCC
Confidence 9999999983 11 23445555543 38999998754
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1.5e-06 Score=75.67 Aligned_cols=79 Identities=18% Similarity=0.204 Sum_probs=56.7
Q ss_pred CC--CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 16 KG--MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 16 ~~--k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.| ++|||||++|+||+++++.+...|+ +|+++++++++.+...+++ +... .+|.++.+.. +.+.+..
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~----~~~~~~~ 227 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFDA---AINYKKDNVA----EQLRESC 227 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCSE---EEETTTSCHH----HHHHHHC
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCce---EEecCchHHH----HHHHHhc
Confidence 46 9999999999999999999999999 9999999987766554322 3332 2466553222 2222222
Q ss_pred CCCccEEEECCC
Q 024125 93 NGKLNILVNNVG 104 (272)
Q Consensus 93 ~~~id~li~~ag 104 (272)
++.+|++|+|+|
T Consensus 228 ~~~~d~vi~~~G 239 (357)
T 2zb4_A 228 PAGVDVYFDNVG 239 (357)
T ss_dssp TTCEEEEEESCC
T ss_pred CCCCCEEEECCC
Confidence 236999999998
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=1.7e-06 Score=74.62 Aligned_cols=79 Identities=18% Similarity=0.251 Sum_probs=57.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+|++|+||.++++.+...|++|+.++|++++.+...+++ +.... .|.++.+.. +.+.+..++.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~~---~~~~~~~~~----~~~~~~~~~~ 218 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDGA---IDYKNEDLA----AGLKRECPKG 218 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSEE---EETTTSCHH----HHHHHHCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCEE---EECCCHHHH----HHHHHhcCCC
Confidence 5899999999999999999999999999999999988877653333 33322 355543322 2222223356
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++|+|+|
T Consensus 219 ~d~vi~~~g 227 (336)
T 4b7c_A 219 IDVFFDNVG 227 (336)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999999998
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.31 E-value=2.2e-06 Score=73.93 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=58.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|+++|||||+|+||+++++.+...|++|++++|++++++...+ + +... ..|.++.+..+++.+.. . +.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g~~~---~~d~~~~~~~~~i~~~~-~--~~~ 214 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---GCHH---TINYSTQDFAEVVREIT-G--GKG 214 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHH-T--TCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCHHHHHHHHHHh-C--CCC
Confidence 58999999999999999999999999999999999877765543 3 2232 23665544333333322 1 136
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|+|+|.
T Consensus 215 ~d~vi~~~g~ 224 (333)
T 1wly_A 215 VDVVYDSIGK 224 (333)
T ss_dssp EEEEEECSCT
T ss_pred CeEEEECCcH
Confidence 9999999984
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.31 E-value=2.7e-06 Score=63.76 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=59.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+.++++|+|+ |.+|+++++.|.++|++|++++++++..+.+.+ . .+.++..|.++++.++++ .. .+
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~------~~-~~ 70 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--GFDAVIADPTDESFYRSL------DL-EG 70 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEECCTTCHHHHHHS------CC-TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--CCcEEECCCCCHHHHHhC------Cc-cc
Confidence 4578999998 779999999999999999999999887765543 2 245678999998876543 11 46
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
.|++|.+.+
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 899998776
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.31 E-value=1.4e-06 Score=74.93 Aligned_cols=104 Identities=20% Similarity=0.231 Sum_probs=71.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++||||||+|+||+++++.+...|++|++++|++++.+...+ + +... .+|.++.+..+++.+... +.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~~---~~~ 209 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEITG---GKK 209 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHTT---TCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHhC---CCC
Confidence 58999999999999999999999999999999999887665543 2 2232 246555443333333221 136
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
+|++|+|+|. . ..+..++.++. .|+++.+++..+
T Consensus 210 ~D~vi~~~g~----~----------------------~~~~~~~~l~~--~G~iv~~g~~~~ 243 (327)
T 1qor_A 210 VRVVYDSVGR----D----------------------TWERSLDCLQR--RGLMVSFGNSSG 243 (327)
T ss_dssp EEEEEECSCG----G----------------------GHHHHHHTEEE--EEEEEECCCTTC
T ss_pred ceEEEECCch----H----------------------HHHHHHHHhcC--CCEEEEEecCCC
Confidence 9999999982 0 02344455543 389999987654
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=2.1e-06 Score=74.74 Aligned_cols=79 Identities=18% Similarity=0.285 Sum_probs=57.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (272)
.|++|||+||+|+||.++++.+...|++|++++|++++++.. +++ +... .+|.++.+..+++. +..+ .
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~----~~~~~~ 230 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSEATL----KFTKGA 230 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHHHHH----HHTTTS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHHHHH----HHhcCC
Confidence 589999999999999999999999999999999998877665 333 2332 24555543333332 2221 3
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|+|+|.
T Consensus 231 ~~d~vi~~~G~ 241 (354)
T 2j8z_A 231 GVNLILDCIGG 241 (354)
T ss_dssp CEEEEEESSCG
T ss_pred CceEEEECCCc
Confidence 69999999984
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.29 E-value=1.8e-05 Score=68.04 Aligned_cols=116 Identities=16% Similarity=0.177 Sum_probs=73.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCCC--eEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGF--VVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++|+||||+|.+|..++..|+++| .+|++++++++ +....++.+... ++.. +++..+..+.+
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al-------- 74 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL-------- 74 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH--------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc--------
Confidence 589999999999999999999998 68999998776 222333433221 2222 12233443333
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|++||....... +. ...+..|+.....+.+.+.++ ...+.|+++|.+.
T Consensus 75 ~gaDvVi~~ag~~~~~g~---~r---~dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SNPv 128 (326)
T 1smk_A 75 TGMDLIIVPAGVPRKPGM---TR---DDLFKINAGIVKTLCEGIAKC---CPRAIVNLISNPV 128 (326)
T ss_dssp TTCSEEEECCCCCCCSSC---CC---SHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSSH
T ss_pred CCCCEEEEcCCcCCCCCC---CH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCch
Confidence 469999999996432211 11 245788888888777776442 2335555555443
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.29 E-value=2.2e-06 Score=72.22 Aligned_cols=82 Identities=16% Similarity=0.075 Sum_probs=60.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++......+.....+..+. .+.+
T Consensus 123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l------ 192 (283)
T 3jyo_A 123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVI------ 192 (283)
T ss_dssp TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHH------
T ss_pred cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHH------
Confidence 3688999999998 7999999999999999 799999999999988888765422222223343332 2223
Q ss_pred cCCCccEEEECCCCC
Q 024125 92 FNGKLNILVNNVGTN 106 (272)
Q Consensus 92 ~~~~id~li~~ag~~ 106 (272)
...|+|||+....
T Consensus 193 --~~~DiVInaTp~G 205 (283)
T 3jyo_A 193 --AAADGVVNATPMG 205 (283)
T ss_dssp --HHSSEEEECSSTT
T ss_pred --hcCCEEEECCCCC
Confidence 2479999998754
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.28 E-value=3e-06 Score=73.67 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=56.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+|++|+||.++++.+...|++|+.++|++++.+.. + +.+... .+|.++.+..+++.+.. .+.+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~---~~ga~~---~~d~~~~~~~~~~~~~~---~~~~ 239 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-L---QNGAHE---VFNHREVNYIDKIKKYV---GEKG 239 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCSE---EEETTSTTHHHHHHHHH---CTTC
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-H---HcCCCE---EEeCCCchHHHHHHHHc---CCCC
Confidence 589999999999999999999999999999999998877633 2 223332 24665544333332221 1136
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++|+|+|
T Consensus 240 ~D~vi~~~G 248 (351)
T 1yb5_A 240 IDIIIEMLA 248 (351)
T ss_dssp EEEEEESCH
T ss_pred cEEEEECCC
Confidence 999999998
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.1e-06 Score=76.13 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=58.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+|++|+||+++++.+...|++|++++|++++++...+++ +... ..|.++.+++.+.+.++. ++.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~---~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRCF---PNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHHC---TTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHHh---CCC
Confidence 5899999999999999999999999999999999988766554222 3332 235554333433444332 246
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++|+|+|
T Consensus 226 ~d~vi~~~g 234 (345)
T 2j3h_A 226 IDIYFENVG 234 (345)
T ss_dssp EEEEEESSC
T ss_pred CcEEEECCC
Confidence 999999998
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=9.7e-06 Score=69.15 Aligned_cols=84 Identities=20% Similarity=0.232 Sum_probs=62.7
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC---hHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN---EVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~---~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
..++++|++||+|+ ||.|++++..|++.|+ +|+++.|+ .++.+++.+++... +..+. ..+..+.+...+.+
T Consensus 143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~~l- 218 (312)
T 3t4e_A 143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVT--VTDLADQHAFTEAL- 218 (312)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHH-
T ss_pred CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceE--EechHhhhhhHhhc-
Confidence 35688999999998 8999999999999998 89999999 88888888877643 33333 34555543322222
Q ss_pred HHHHHcCCCccEEEECCCCC
Q 024125 87 EVGSKFNGKLNILVNNVGTN 106 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~ 106 (272)
...|+|||+....
T Consensus 219 -------~~~DiIINaTp~G 231 (312)
T 3t4e_A 219 -------ASADILTNGTKVG 231 (312)
T ss_dssp -------HHCSEEEECSSTT
T ss_pred -------cCceEEEECCcCC
Confidence 2579999988764
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.8e-05 Score=66.36 Aligned_cols=78 Identities=13% Similarity=0.223 Sum_probs=58.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+ .+. ..|+ +++ . +
T Consensus 115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~--~~~~---~~~---~----~-- 178 (272)
T 1p77_A 115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQ--AVSM---DSI---P----L-- 178 (272)
T ss_dssp CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEE--EEEG---GGC---C----C--
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeE--EeeH---HHh---c----c--
Confidence 4678999999998 799999999999999999999999999988887775422 222 2332 111 0 0
Q ss_pred CCCccEEEECCCCCC
Q 024125 93 NGKLNILVNNVGTNI 107 (272)
Q Consensus 93 ~~~id~li~~ag~~~ 107 (272)
+..|+|||+++...
T Consensus 179 -~~~DivIn~t~~~~ 192 (272)
T 1p77_A 179 -QTYDLVINATSAGL 192 (272)
T ss_dssp -SCCSEEEECCCC--
T ss_pred -CCCCEEEECCCCCC
Confidence 36999999998743
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.14 E-value=7e-05 Score=63.68 Aligned_cols=144 Identities=10% Similarity=-0.002 Sum_probs=84.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeC--ChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSR--NEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r--~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
++|+||||+|.+|.+++..|+.+|. ++.++++ ++++++....++.+. ...+.+.. + +.++ +
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a----~----- 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED----T----- 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG----G-----
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH----h-----
Confidence 3799999999999999999998875 6899998 776655444444332 22222222 2 2111 2
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCC--------CCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGL--------SHV 161 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~--------~~~ 161 (272)
...|++|++||...... .+. ...+..|+..+..+.+.+ .+.. .+.|+++|..... .+.
T Consensus 69 ---~~aDvVi~~ag~~~~~g---~~r---~dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SNPv~~~~~~~~~~~~~ 135 (303)
T 1o6z_A 69 ---AGSDVVVITAGIPRQPG---QTR---IDLAGDNAPIMEDIQSSL----DEHNDDYISLTTSNPVDLLNRHLYEAGDR 135 (303)
T ss_dssp ---TTCSEEEECCCCCCCTT---CCH---HHHHHHHHHHHHHHHHHH----HTTCSCCEEEECCSSHHHHHHHHHHHSSS
T ss_pred ---CCCCEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCChHHHHHHHHHHHcCC
Confidence 46999999999642211 122 245788888887777666 4443 3455555443321 123
Q ss_pred CCChhhHH-HHHHHHHHHHHHHHHHc
Q 024125 162 GSGSIYGA-TKAAMNQLTRNLACEWA 186 (272)
Q Consensus 162 ~~~~~Y~~-sK~a~~~~~~~la~el~ 186 (272)
+.....+. +-.=...+-..+++.+.
T Consensus 136 p~~rviG~gt~Ld~~r~~~~la~~l~ 161 (303)
T 1o6z_A 136 SREQVIGFGGRLDSARFRYVLSEEFD 161 (303)
T ss_dssp CGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred CHHHeeecccchhHHHHHHHHHHHhC
Confidence 33333444 22223445556666663
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=7.7e-06 Score=70.91 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=56.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN- 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 93 (272)
.|++|||+|++|+||+.+++.+... |++|+++++++++.+... ++ +.... .|.++.+..++ +.+...
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~---g~~~~---~~~~~~~~~~~----~~~~~~~ 238 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---GADYV---INASMQDPLAE----IRRITES 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHH----HHHHTTT
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCCEE---ecCCCccHHHH----HHHHhcC
Confidence 5899999999999999999999998 999999999988776553 33 33322 35554332222 222221
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+++|++|+|+|.
T Consensus 239 ~~~d~vi~~~g~ 250 (347)
T 1jvb_A 239 KGVDAVIDLNNS 250 (347)
T ss_dssp SCEEEEEESCCC
T ss_pred CCceEEEECCCC
Confidence 379999999984
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=2.9e-05 Score=66.38 Aligned_cols=146 Identities=14% Similarity=0.109 Sum_probs=89.5
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeC--ChHHHHHHHHHHHh---C-CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSR--NEVELNKCLKEWQS---K-GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r--~~~~~~~~~~~~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+|+||||+|++|++++..|+.+|. ++.++++ ++++++....++.+ . +..+.+...| | +..+.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~~al----- 72 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENLRII----- 72 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCGGGG-----
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chHHHh-----
Confidence 699999999999999999998875 6888998 76655443333322 1 1222222211 0 011112
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC--------CCCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL--------SHVG 162 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~--------~~~~ 162 (272)
...|+|||+||...... .+. ...+..|+..+..+.+++..+ ..+.|+++|.+... .+.+
T Consensus 73 ---~gaD~Vi~~Ag~~~~~g---~~r---~dl~~~N~~i~~~i~~~i~~~----~~~~vlv~SNPv~~~t~~~~k~~~~p 139 (313)
T 1hye_A 73 ---DESDVVIITSGVPRKEG---MSR---MDLAKTNAKIVGKYAKKIAEI----CDTKIFVITNPVDVMTYKALVDSKFE 139 (313)
T ss_dssp ---TTCSEEEECCSCCCCTT---CCH---HHHHHHHHHHHHHHHHHHHHH----CCCEEEECSSSHHHHHHHHHHHHCCC
T ss_pred ---CCCCEEEECCCCCCCCC---CcH---HHHHHHHHHHHHHHHHHHHHh----CCeEEEEecCcHHHHHHHHHHhhCcC
Confidence 46999999999742211 122 346888999988888877543 23466666654421 1244
Q ss_pred CChhhHH-HHHHHHHHHHHHHHHHc
Q 024125 163 SGSIYGA-TKAAMNQLTRNLACEWA 186 (272)
Q Consensus 163 ~~~~Y~~-sK~a~~~~~~~la~el~ 186 (272)
....++. +..-...+...+++.+.
T Consensus 140 ~~rviG~gt~LD~~r~~~~la~~lg 164 (313)
T 1hye_A 140 RNQVFGLGTHLDSLRFKVAIAKFFG 164 (313)
T ss_dssp TTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred hhcEEEeCccHHHHHHHHHHHHHhC
Confidence 4455666 55556666677777774
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.08 E-value=2.3e-05 Score=58.19 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=55.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+++++|+|+ |.+|+.+++.|.+.|++|++++|+++..+.+.+. .+ +..+..|.++.+.+.+. .. ...
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~--~~~~~~d~~~~~~l~~~------~~-~~~ 70 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---ID--ALVINGDCTKIKTLEDA------GI-EDA 70 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CS--SEEEESCTTSHHHHHHT------TT-TTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cC--cEEEEcCCCCHHHHHHc------Cc-ccC
Confidence 468999987 9999999999999999999999998776655432 12 33456788877654321 12 468
Q ss_pred cEEEECCC
Q 024125 97 NILVNNVG 104 (272)
Q Consensus 97 d~li~~ag 104 (272)
|++|.+.+
T Consensus 71 d~vi~~~~ 78 (140)
T 1lss_A 71 DMYIAVTG 78 (140)
T ss_dssp SEEEECCS
T ss_pred CEEEEeeC
Confidence 99999975
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.07 E-value=1e-05 Score=68.67 Aligned_cols=79 Identities=18% Similarity=0.271 Sum_probs=57.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++......+ . +.+++.+ .
T Consensus 137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~----~---~~~~~~~-------~ 201 (297)
T 2egg_A 137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAY----F---SLAEAET-------R 201 (297)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCE----E---CHHHHHH-------T
T ss_pred CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCce----e---eHHHHHh-------h
Confidence 3578999999998 7999999999999998 99999999999888876653211111 1 1222222 2
Q ss_pred cCCCccEEEECCCCCC
Q 024125 92 FNGKLNILVNNVGTNI 107 (272)
Q Consensus 92 ~~~~id~li~~ag~~~ 107 (272)
. ...|+||++.+...
T Consensus 202 ~-~~aDivIn~t~~~~ 216 (297)
T 2egg_A 202 L-AEYDIIINTTSVGM 216 (297)
T ss_dssp G-GGCSEEEECSCTTC
T ss_pred h-ccCCEEEECCCCCC
Confidence 2 46899999998643
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=1.1e-05 Score=70.53 Aligned_cols=100 Identities=22% Similarity=0.270 Sum_probs=66.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh---HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+++|++|||+|+ |++|..+++.+...|++|+++++++ ++.+.. +++ +.... | ++ ++.+.+.+ .
T Consensus 178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~---ga~~v----~-~~--~~~~~~~~-~- 243 (366)
T 2cdc_A 178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET---KTNYY----N-SS--NGYDKLKD-S- 243 (366)
T ss_dssp SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH---TCEEE----E-CT--TCSHHHHH-H-
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh---CCcee----c-hH--HHHHHHHH-h-
Confidence 345999999999 9999999999988999999999987 665433 333 33221 4 43 22222222 1
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHH-HHHHHHHHcCCCCeEEEecCCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC-QLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~-~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
. +.+|++|+++|... .+ +.+++.|+. .|++++++...
T Consensus 244 -~-~~~d~vid~~g~~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~ 281 (366)
T 2cdc_A 244 -V-GKFDVIIDATGADV-------------------------NILGNVIPLLGR--NGVLGLFGFST 281 (366)
T ss_dssp -H-CCEEEEEECCCCCT-------------------------HHHHHHGGGEEE--EEEEEECSCCC
T ss_pred -C-CCCCEEEECCCChH-------------------------HHHHHHHHHHhc--CCEEEEEecCC
Confidence 1 46999999998521 12 445555543 38999998754
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.8e-05 Score=68.75 Aligned_cols=79 Identities=22% Similarity=0.370 Sum_probs=57.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+||+|+||.++++.+...|++|+++++++++.+...+ + +.... .|.++.+..+.+. +.. ++.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~~---~~~~~~~~~~~~~-~~~---~~g 235 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---GAKRG---INYRSEDFAAVIK-AET---GQG 235 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHH-HHH---SSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEE---EeCCchHHHHHHH-HHh---CCC
Confidence 58999999999999999999999999999999999988765543 2 33322 3444433222222 222 357
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|+|+|.
T Consensus 236 ~Dvvid~~g~ 245 (353)
T 4dup_A 236 VDIILDMIGA 245 (353)
T ss_dssp EEEEEESCCG
T ss_pred ceEEEECCCH
Confidence 9999999984
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1.4e-05 Score=68.85 Aligned_cols=79 Identities=22% Similarity=0.186 Sum_probs=55.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (272)
.|++|||+||+|+||.++++.+...|++|+.+++++++++... + .+.... .|.++.+..+ ++.+..+ .
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~~---~~~~~~~~~~----~~~~~~~~~ 216 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-E---YGAEYL---INASKEDILR----QVLKFTNGK 216 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---TTCSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---cCCcEE---EeCCCchHHH----HHHHHhCCC
Confidence 5899999999999999999999999999999999988776433 2 333322 3444433222 2222221 3
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|+|+|.
T Consensus 217 g~D~vid~~g~ 227 (334)
T 3qwb_A 217 GVDASFDSVGK 227 (334)
T ss_dssp CEEEEEECCGG
T ss_pred CceEEEECCCh
Confidence 59999999984
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.03 E-value=2.9e-05 Score=67.30 Aligned_cols=79 Identities=15% Similarity=0.155 Sum_probs=55.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
++++||+||+|+||..+++.+...|++|+.+++++++.+... ++ +.... .|.++.+ +.+.+.+.... ..+
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~-~~~~v~~~~~~--~g~ 234 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAHV---LNEKAPD-FEATLREVMKA--EQP 234 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSEE---EETTSTT-HHHHHHHHHHH--HCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EECCcHH-HHHHHHHHhcC--CCC
Confidence 489999999999999999988888999999999988876554 22 33322 2444332 22223233222 269
Q ss_pred cEEEECCCC
Q 024125 97 NILVNNVGT 105 (272)
Q Consensus 97 d~li~~ag~ 105 (272)
|++|+|+|.
T Consensus 235 D~vid~~g~ 243 (349)
T 3pi7_A 235 RIFLDAVTG 243 (349)
T ss_dssp CEEEESSCH
T ss_pred cEEEECCCC
Confidence 999999984
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.9e-05 Score=67.85 Aligned_cols=79 Identities=18% Similarity=0.199 Sum_probs=56.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (272)
.|++|||+||+|++|..+++.+...|++|+.+++++++++... ++ +.... .|.++.+..++ +.+..+ .
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~----~~~~~~~~ 208 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWET---IDYSHEDVAKR----VLELTDGK 208 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHH----HHHHTTTC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EeCCCccHHHH----HHHHhCCC
Confidence 5899999999999999999999889999999999988876554 22 33322 34444332222 222222 3
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|+|+|.
T Consensus 209 g~Dvvid~~g~ 219 (325)
T 3jyn_A 209 KCPVVYDGVGQ 219 (325)
T ss_dssp CEEEEEESSCG
T ss_pred CceEEEECCCh
Confidence 69999999984
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.00 E-value=2.1e-05 Score=68.01 Aligned_cols=104 Identities=19% Similarity=0.245 Sum_probs=70.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.++++||+|++|++|+.+++.+...|++|+.+++++++.+... ++ +... ..|.++.+ +.+.+.+... +.+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~-~~~~~~~~~~--~~~ 235 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPD-WPKEVRRLTG--GKG 235 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTT-HHHHHHHHTT--TTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCccc-HHHHHHHHhC--CCC
Confidence 5899999999999999999999999999999999988876654 23 2222 24665543 2222222211 136
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
+|++|+|+|. . . .+.+++.++. .|+++.+++..+
T Consensus 236 ~d~vi~~~g~-~-------~------------------~~~~~~~l~~--~G~~v~~g~~~~ 269 (343)
T 2eih_A 236 ADKVVDHTGA-L-------Y------------------FEGVIKATAN--GGRIAIAGASSG 269 (343)
T ss_dssp EEEEEESSCS-S-------S------------------HHHHHHHEEE--EEEEEESSCCCS
T ss_pred ceEEEECCCH-H-------H------------------HHHHHHhhcc--CCEEEEEecCCC
Confidence 9999999982 1 0 2344455544 379999987654
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.97 E-value=6.1e-05 Score=57.16 Aligned_cols=77 Identities=13% Similarity=0.023 Sum_probs=57.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+.++|+|+ |.+|+.+++.|.+.|++|++++++ +++.+.+.+... ..+.++..|.++++.+++.- . .+
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a~------i-~~ 71 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAG------I-DR 71 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHT------T-TT
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc---CCCeEEEcCCCCHHHHHHcC------h-hh
Confidence 467889986 999999999999999999999997 455444443321 23567789999988765441 1 46
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
.|.+|.+.+
T Consensus 72 ad~vi~~~~ 80 (153)
T 1id1_A 72 CRAILALSD 80 (153)
T ss_dssp CSEEEECSS
T ss_pred CCEEEEecC
Confidence 899998876
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.97 E-value=3.9e-05 Score=66.90 Aligned_cols=78 Identities=21% Similarity=0.231 Sum_probs=58.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+++++|+|+|+ |++|+++++.+...|++|++++|+.++++.+.+.... .+. ++..+.+++.+.+
T Consensus 164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~---~~~~~~~~~~~~~-------- 228 (361)
T 1pjc_A 164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAV-------- 228 (361)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHH--------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeE---eeeCCHHHHHHHH--------
Confidence 477899999999 9999999999999999999999999988877655432 111 1223344443322
Q ss_pred CCccEEEECCCCC
Q 024125 94 GKLNILVNNVGTN 106 (272)
Q Consensus 94 ~~id~li~~ag~~ 106 (272)
...|++|++++..
T Consensus 229 ~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 229 AEADLLIGAVLVP 241 (361)
T ss_dssp HTCSEEEECCCCT
T ss_pred cCCCEEEECCCcC
Confidence 2589999999863
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.3e-05 Score=69.24 Aligned_cols=79 Identities=16% Similarity=0.150 Sum_probs=55.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (272)
.|++|||+|++|+||..+++.+...|++|+.+++++++.+...+ + +.... .|.++.+.. +.+.+..+ .
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~---~~~~~~~~~----~~~~~~~~~~ 212 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYV---IDTSTAPLY----ETVMELTNGI 212 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EETTTSCHH----HHHHHHTTTS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEE---EeCCcccHH----HHHHHHhCCC
Confidence 58999999999999999999888899999999998887765543 2 33322 244443222 22222222 2
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|+|+|.
T Consensus 213 g~Dvvid~~g~ 223 (340)
T 3gms_A 213 GADAAIDSIGG 223 (340)
T ss_dssp CEEEEEESSCH
T ss_pred CCcEEEECCCC
Confidence 69999999984
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.96 E-value=6.8e-05 Score=63.03 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=59.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+++...+ .+.....+ + +
T Consensus 122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~--~---l---------- 184 (281)
T 3o8q_A 122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE--Q---L---------- 184 (281)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG--G---C----------
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH--H---h----------
Confidence 5688999999998 6999999999999996 99999999999999888876543 23333221 1 0
Q ss_pred cCCCccEEEECCCCC
Q 024125 92 FNGKLNILVNNVGTN 106 (272)
Q Consensus 92 ~~~~id~li~~ag~~ 106 (272)
....|+|||+....
T Consensus 185 -~~~aDiIInaTp~g 198 (281)
T 3o8q_A 185 -KQSYDVIINSTSAS 198 (281)
T ss_dssp -CSCEEEEEECSCCC
T ss_pred -cCCCCEEEEcCcCC
Confidence 03589999998764
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.95 E-value=5.2e-05 Score=68.21 Aligned_cols=85 Identities=15% Similarity=0.231 Sum_probs=62.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEec----------CCCHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD----------AASPDQREKLI 85 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D----------~~~~~~~~~~~ 85 (272)
.|++|||+|++|++|...++.+...|++|+++++++++++.+. ++ +....+...+ .++.++++++.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-hh---CCcEEEecCcCcccccccccccchHHHHHHH
Confidence 5889999999999999999988889999999998888776553 33 3332222111 24566677777
Q ss_pred HHHHHHcCC-CccEEEECCC
Q 024125 86 QEVGSKFNG-KLNILVNNVG 104 (272)
Q Consensus 86 ~~~~~~~~~-~id~li~~ag 104 (272)
+++.+..++ .+|++|.++|
T Consensus 304 ~~i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp HHHHHHHTSCCEEEEEECSC
T ss_pred HHHHHHhCCCCCcEEEEcCC
Confidence 777766543 6999999998
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=2.5e-05 Score=68.23 Aligned_cols=99 Identities=19% Similarity=0.267 Sum_probs=68.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+|+ |+||..+++.+...|++|+.+++++++.+...++ .+... ..|..+.+.++++ . +.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~~---v~~~~~~~~~~~~-------~-~~ 251 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGADS---FLVSRDQEQMQAA-------A-GT 251 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCSE---EEETTCHHHHHHT-------T-TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCce---EEeccCHHHHHHh-------h-CC
Confidence 6899999996 9999999999988999999999998877655432 23332 2355555433221 2 47
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
+|++|+++|... .++..++.++. .|+++++++..
T Consensus 252 ~D~vid~~g~~~-------------------------~~~~~~~~l~~--~G~iv~~g~~~ 285 (366)
T 1yqd_A 252 LDGIIDTVSAVH-------------------------PLLPLFGLLKS--HGKLILVGAPE 285 (366)
T ss_dssp EEEEEECCSSCC-------------------------CSHHHHHHEEE--EEEEEECCCCS
T ss_pred CCEEEECCCcHH-------------------------HHHHHHHHHhc--CCEEEEEccCC
Confidence 999999998521 11234455543 38999998754
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.94 E-value=1e-05 Score=69.99 Aligned_cols=78 Identities=23% Similarity=0.337 Sum_probs=55.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC-
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG- 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~- 94 (272)
.|++|||+|++|+||..+++.+...|++|+.+++++++.+...+ + +.... .|.. +++ .+.+.+..++
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~~v---~~~~--~~~---~~~v~~~~~~~ 226 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V---GADIV---LPLE--EGW---AKAVREATGGA 226 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSEE---EESS--TTH---HHHHHHHTTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEE---ecCc--hhH---HHHHHHHhCCC
Confidence 58999999999999999999999999999999999888764443 3 33322 2333 222 2233333323
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|+|+|.
T Consensus 227 g~Dvvid~~g~ 237 (342)
T 4eye_A 227 GVDMVVDPIGG 237 (342)
T ss_dssp CEEEEEESCC-
T ss_pred CceEEEECCch
Confidence 69999999984
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.91 E-value=5.2e-05 Score=65.46 Aligned_cols=101 Identities=19% Similarity=0.244 Sum_probs=68.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+|+ |++|..+++.+...|++|+.+++++++.+... +.+... ..|.++.+ +.+.+.++ . +.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~---~~d~~~~~-~~~~~~~~---~-~~ 230 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----ELGADL---VVNPLKED-AAKFMKEK---V-GG 230 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTCSE---EECTTTSC-HHHHHHHH---H-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HCCCCE---EecCCCcc-HHHHHHHH---h-CC
Confidence 5789999999 88999999999999999999999988876543 223332 24555432 22222222 2 47
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
+|++|+++|.. + .++..++.++. .|+++.+++..
T Consensus 231 ~d~vid~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~~ 264 (339)
T 1rjw_A 231 VHAAVVTAVSK----------P---------------AFQSAYNSIRR--GGACVLVGLPP 264 (339)
T ss_dssp EEEEEESSCCH----------H---------------HHHHHHHHEEE--EEEEEECCCCS
T ss_pred CCEEEECCCCH----------H---------------HHHHHHHHhhc--CCEEEEecccC
Confidence 99999999841 1 12444555544 37999998754
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.90 E-value=4.5e-05 Score=66.58 Aligned_cols=76 Identities=18% Similarity=0.218 Sum_probs=58.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+.-+.++|+|.|| |++|+.+++.|++ ..+|.+.+++.++++...+ .+..+.+|++|.+++.+++
T Consensus 12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-------~~~~~~~d~~d~~~l~~~~------- 75 (365)
T 3abi_A 12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-------FATPLKVDASNFDKLVEVM------- 75 (365)
T ss_dssp ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-------TSEEEECCTTCHHHHHHHH-------
T ss_pred ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-------cCCcEEEecCCHHHHHHHH-------
Confidence 3444557999998 9999999998865 4789999999887765532 3445678999999887777
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
...|+||++++.
T Consensus 76 -~~~DvVi~~~p~ 87 (365)
T 3abi_A 76 -KEFELVIGALPG 87 (365)
T ss_dssp -TTCSEEEECCCG
T ss_pred -hCCCEEEEecCC
Confidence 468999999874
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=4e-05 Score=66.79 Aligned_cols=103 Identities=16% Similarity=0.223 Sum_probs=69.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+||+|++|..+++.+...|++|+.+++++++.+...+ .+.... .|.++. ++.+.+.+ ..+..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~~---~~~~~~-~~~~~~~~---~~~~g 231 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCDRP---INYKTE-PVGTVLKQ---EYPEG 231 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEE---EETTTS-CHHHHHHH---HCTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCcEE---EecCCh-hHHHHHHH---hcCCC
Confidence 58899999999999999999999999999999999877665432 333322 243332 22222322 22246
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
+|++|+|+|. +. ++.+++.++. .|+++.+++..+
T Consensus 232 ~D~vid~~g~-----------~~---------------~~~~~~~l~~--~G~iv~~g~~~~ 265 (362)
T 2c0c_A 232 VDVVYESVGG-----------AM---------------FDLAVDALAT--KGRLIVIGFISG 265 (362)
T ss_dssp EEEEEECSCT-----------HH---------------HHHHHHHEEE--EEEEEECCCGGG
T ss_pred CCEEEECCCH-----------HH---------------HHHHHHHHhc--CCEEEEEeCCCC
Confidence 9999999982 11 2244444544 379999987654
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=6.7e-05 Score=65.82 Aligned_cols=78 Identities=17% Similarity=0.165 Sum_probs=58.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+.+++|+|+|+ |+||+.+++.+...|++|++++|+.++++...+.+ +..+ .++.++.+++.+.+
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~---~~~~~~~~~l~~~l-------- 229 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRI---HTRYSSAYELEGAV-------- 229 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSS---EEEECCHHHHHHHH--------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCee---EeccCCHHHHHHHH--------
Confidence 588999999998 99999999999999999999999998877665433 2222 12344455554444
Q ss_pred CCccEEEECCCCC
Q 024125 94 GKLNILVNNVGTN 106 (272)
Q Consensus 94 ~~id~li~~ag~~ 106 (272)
...|++|++++..
T Consensus 230 ~~aDvVi~~~~~p 242 (377)
T 2vhw_A 230 KRADLVIGAVLVP 242 (377)
T ss_dssp HHCSEEEECCCCT
T ss_pred cCCCEEEECCCcC
Confidence 2589999999853
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00035 Score=60.70 Aligned_cols=83 Identities=19% Similarity=0.129 Sum_probs=57.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||+|+ |++|...++.....|++ |+.+++++++.+...+ + . ..+.....|..+.+++.+.+.+... +.
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-~--~~~~~~~~~~~~~~~~~~~v~~~t~--g~ 251 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-C--PEVVTHKVERLSAEESAKKIVESFG--GI 251 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-C--TTCEEEECCSCCHHHHHHHHHHHTS--SC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-c--hhcccccccccchHHHHHHHHHHhC--CC
Confidence 4789999998 99999999988888997 9999999888765543 3 2 2333334454555555444433321 23
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.++|.
T Consensus 252 g~Dvvid~~g~ 262 (363)
T 3m6i_A 252 EPAVALECTGV 262 (363)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 69999999984
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00011 Score=63.56 Aligned_cols=78 Identities=15% Similarity=0.198 Sum_probs=55.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+||+|++|..+++.+...|++|+.+++++++.+...+ + +.... .|..+ +. .+++.+..+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---i~~~~--~~---~~~~~~~~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GADIV---LNHKE--SL---LNQFKTQGIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCSEE---ECTTS--CH---HHHHHHHTCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEE---EECCc--cH---HHHHHHhCCCC
Confidence 58999999999999999999998899999999998887665543 3 33322 23332 22 22222223346
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++++|+|.
T Consensus 218 ~Dvv~d~~g~ 227 (346)
T 3fbg_A 218 VDYVFCTFNT 227 (346)
T ss_dssp EEEEEESSCH
T ss_pred ccEEEECCCc
Confidence 9999999983
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=3.6e-05 Score=58.66 Aligned_cols=78 Identities=15% Similarity=0.121 Sum_probs=55.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+..+++++|.|+ |.+|+.+++.|.+.|++|++++|++++.+.+.+ ..+ ...+..|.++.+.+.+. ..
T Consensus 16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g--~~~~~~d~~~~~~l~~~------~~- 82 (155)
T 2g1u_A 16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFS--GFTVVGDAAEFETLKEC------GM- 82 (155)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCC--SEEEESCTTSHHHHHTT------TG-
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCC--CcEEEecCCCHHHHHHc------Cc-
Confidence 356789999996 999999999999999999999999877543321 122 33456788776543321 11
Q ss_pred CCccEEEECCC
Q 024125 94 GKLNILVNNVG 104 (272)
Q Consensus 94 ~~id~li~~ag 104 (272)
...|++|.+.+
T Consensus 83 ~~ad~Vi~~~~ 93 (155)
T 2g1u_A 83 EKADMVFAFTN 93 (155)
T ss_dssp GGCSEEEECSS
T ss_pred ccCCEEEEEeC
Confidence 36899999887
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00019 Score=62.15 Aligned_cols=103 Identities=16% Similarity=0.227 Sum_probs=68.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+... ++ +.... .|.++.+ + .+++.+..++
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~-~---~~~v~~~~~g 234 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GADYV---INPFEED-V---VKEVMDITDG 234 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCSEE---ECTTTSC-H---HHHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCEE---ECCCCcC-H---HHHHHHHcCC
Confidence 7899999999 9999999999888999 9999999987766543 33 22221 3444322 2 2222222222
Q ss_pred -CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q 024125 95 -KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (272)
Q Consensus 95 -~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~ 157 (272)
.+|++|+++|. .+ .++.+++.++. .|+++.+++...
T Consensus 235 ~g~D~vid~~g~----------~~---------------~~~~~~~~l~~--~G~iv~~g~~~~ 271 (348)
T 2d8a_A 235 NGVDVFLEFSGA----------PK---------------ALEQGLQAVTP--AGRVSLLGLYPG 271 (348)
T ss_dssp SCEEEEEECSCC----------HH---------------HHHHHHHHEEE--EEEEEECCCCSS
T ss_pred CCCCEEEECCCC----------HH---------------HHHHHHHHHhc--CCEEEEEccCCC
Confidence 59999999984 11 12445555544 379999987543
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.71 E-value=8.1e-05 Score=58.21 Aligned_cols=78 Identities=21% Similarity=0.261 Sum_probs=57.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++.+++++|.| .|.+|+.+++.|.+. |++|+++++++++.+.+. ..+ +..+..|.++.+.+.++ ...
T Consensus 36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g--~~~~~gd~~~~~~l~~~-----~~~ 103 (183)
T 3c85_A 36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG--RNVISGDATDPDFWERI-----LDT 103 (183)
T ss_dssp CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT--CCEEECCTTCHHHHHTB-----CSC
T ss_pred CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC--CCEEEcCCCCHHHHHhc-----cCC
Confidence 45677899998 599999999999999 999999999988766543 223 33456788887654332 001
Q ss_pred CCCccEEEECCC
Q 024125 93 NGKLNILVNNVG 104 (272)
Q Consensus 93 ~~~id~li~~ag 104 (272)
...|++|.+.+
T Consensus 104 -~~ad~vi~~~~ 114 (183)
T 3c85_A 104 -GHVKLVLLAMP 114 (183)
T ss_dssp -CCCCEEEECCS
T ss_pred -CCCCEEEEeCC
Confidence 46899998776
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00011 Score=63.43 Aligned_cols=76 Identities=24% Similarity=0.413 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+||+|+||..+++.+...|++|+.+ +++++++.. +++ +... +| .+. +..+.+.+... +..
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~----i~-~~~-~~~~~~~~~~~--~~g 216 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP----ID-ASR-EPEDYAAEHTA--GQG 216 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE----EE-TTS-CHHHHHHHHHT--TSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE----ec-cCC-CHHHHHHHHhc--CCC
Confidence 58999999999999999999999999999988 777765543 232 3333 33 222 22222323221 136
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++|+|+|
T Consensus 217 ~D~vid~~g 225 (343)
T 3gaz_A 217 FDLVYDTLG 225 (343)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999999998
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00026 Score=52.85 Aligned_cols=73 Identities=14% Similarity=0.111 Sum_probs=56.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+.++|.|. |.+|+.+++.|.+.|++|+++++++++.+.+.+ . .+..+..|.++++.++++- . .+.|
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a~------i-~~ad 73 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLAH------L-ECAK 73 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHTT------G-GGCS
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhcC------c-ccCC
Confidence 45777786 889999999999999999999999988766543 2 3456788999988654431 1 3689
Q ss_pred EEEECCC
Q 024125 98 ILVNNVG 104 (272)
Q Consensus 98 ~li~~ag 104 (272)
.+|.+.+
T Consensus 74 ~vi~~~~ 80 (140)
T 3fwz_A 74 WLILTIP 80 (140)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9988776
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00082 Score=58.14 Aligned_cols=82 Identities=23% Similarity=0.300 Sum_probs=52.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC-HHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||+|+ |++|..+++.+...|++|+.+++++++.+... +.+.... .|.++ .+..+++.+......+.
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGADVT---LVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEE---EECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----HhCCCEE---EcCcccccHHHHHHHHhccccCC
Confidence 5789999997 89999999988889999999999888766443 2333322 23332 22122222211100113
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|+++|.
T Consensus 240 g~D~vid~~g~ 250 (352)
T 1e3j_A 240 LPNVTIDCSGN 250 (352)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 69999999984
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00034 Score=60.39 Aligned_cols=118 Identities=13% Similarity=0.112 Sum_probs=73.4
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
+.+++|.|+|++|.+|..++..++.+|. +|++++.++++++....++.+.. .++.+ . ++. .+.+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~---~~al---- 74 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDI---KEAL---- 74 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCH---HHHH----
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCH---HHHh----
Confidence 3568999999999999999999999984 89999999988776655555421 12211 1 122 1122
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCe-EEEecCCC
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGS-IVFISSVG 156 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~-ii~vsS~~ 156 (272)
...|++|.+||.... + -++-...++.|+.-...+.+.+..+ .+.+. ++++|...
T Consensus 75 ----~dADvVvitaG~p~k-p-----G~~R~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 75 ----TDAKYIVSSGGAPRK-E-----GMTREDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIFNPA 129 (343)
T ss_dssp ----TTEEEEEECCC-------------CHHHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECSSSH
T ss_pred ----CCCCEEEEccCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEecCch
Confidence 469999999996321 1 1122345667766655555554332 34464 67777543
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00018 Score=59.43 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=60.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhC--CCeEEEEE
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSK--GFVVSGSV 72 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~~ 72 (272)
|++++|+|.|+ ||+|.++++.|++.|. ++.+++++. .+.+.+.+.+.+. ..++..+.
T Consensus 29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 67889999996 6999999999999998 899999987 6777777777653 34555555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 73 ~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
.+++ .+.+.+++ ...|+||.+..
T Consensus 108 ~~~~-~~~~~~~~--------~~~DvVi~~~d 130 (249)
T 1jw9_B 108 ALLD-DAELAALI--------AEHDLVLDCTD 130 (249)
T ss_dssp SCCC-HHHHHHHH--------HTSSEEEECCS
T ss_pred ccCC-HhHHHHHH--------hCCCEEEEeCC
Confidence 5565 33343333 36899998875
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.64 E-value=3.4e-05 Score=58.01 Aligned_cols=70 Identities=13% Similarity=0.176 Sum_probs=53.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+++++|.|+ |++|+.+++.|.+.|++|++++|+.++.+++.+++. ..+ .+..+.+ +.+ ...
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~----~~~~~~~---~~~--------~~~ 81 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEY----VLINDID---SLI--------KNN 81 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEE----EECSCHH---HHH--------HTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---Cce----EeecCHH---HHh--------cCC
Confidence 899999996 999999999999999999999999998887776653 121 1233332 223 258
Q ss_pred cEEEECCCC
Q 024125 97 NILVNNVGT 105 (272)
Q Consensus 97 d~li~~ag~ 105 (272)
|+||++.+.
T Consensus 82 Divi~at~~ 90 (144)
T 3oj0_A 82 DVIITATSS 90 (144)
T ss_dssp SEEEECSCC
T ss_pred CEEEEeCCC
Confidence 999999875
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00019 Score=57.77 Aligned_cols=73 Identities=10% Similarity=0.024 Sum_probs=57.8
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
+++|+|+ |.+|+++++.|.++|.+|++++++++..+++.+.. .+.++..|.++.+.++++- . ...|+
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~------i-~~ad~ 68 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAE------V-SKNDV 68 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHT------C-CTTCE
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcC------c-ccCCE
Confidence 5899996 89999999999999999999999998877655332 3456789999988765431 1 46899
Q ss_pred EEECCC
Q 024125 99 LVNNVG 104 (272)
Q Consensus 99 li~~ag 104 (272)
+|.+.+
T Consensus 69 vi~~~~ 74 (218)
T 3l4b_C 69 VVILTP 74 (218)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 997765
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00015 Score=60.58 Aligned_cols=77 Identities=16% Similarity=0.142 Sum_probs=58.4
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
..++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+++.. ..+.... ..+ +. .
T Consensus 115 ~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~--~~~---l~-------~ 179 (272)
T 3pwz_A 115 GEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISR--YEA---LE-------G 179 (272)
T ss_dssp CCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEEC--SGG---GT-------T
T ss_pred CCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEee--HHH---hc-------c
Confidence 35688999999998 6999999999999996 999999999999988887754 2233332 211 10 0
Q ss_pred HcCCCccEEEECCCCC
Q 024125 91 KFNGKLNILVNNVGTN 106 (272)
Q Consensus 91 ~~~~~id~li~~ag~~ 106 (272)
...|+|||+....
T Consensus 180 ---~~~DivInaTp~g 192 (272)
T 3pwz_A 180 ---QSFDIVVNATSAS 192 (272)
T ss_dssp ---CCCSEEEECSSGG
T ss_pred ---cCCCEEEECCCCC
Confidence 2589999988653
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0035 Score=52.51 Aligned_cols=42 Identities=21% Similarity=0.137 Sum_probs=36.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 60 (272)
++|.|.|+ |.+|..+|+.|++.|++|++++|+++.++...+.
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 67788875 7899999999999999999999999888776655
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00028 Score=59.74 Aligned_cols=74 Identities=20% Similarity=0.245 Sum_probs=53.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+|++|++|..+++.+...|++|+.+++++++.+... + .+.... .|.++.++ +.+.+ +.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~~---~~~~~~~~---~~~~~-----~~ 189 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAEEA---ATYAEVPE---RAKAW-----GG 189 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCSEE---EEGGGHHH---HHHHT-----TS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCEE---EECCcchh---HHHHh-----cC
Confidence 5899999999999999999999899999999999888766543 2 233322 34443122 22222 46
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|+ +|.
T Consensus 190 ~d~vid-~g~ 198 (302)
T 1iz0_A 190 LDLVLE-VRG 198 (302)
T ss_dssp EEEEEE-CSC
T ss_pred ceEEEE-CCH
Confidence 999999 873
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00015 Score=62.66 Aligned_cols=77 Identities=17% Similarity=0.242 Sum_probs=53.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+...+ + ... ..|..+. ++.+.+.++. +.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~~---v~~~~~~-~~~~~~~~~~---~~ 230 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----ADR---LVNPLEE-DLLEVVRRVT---GS 230 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CSE---EECTTTS-CHHHHHHHHH---SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HHh---ccCcCcc-CHHHHHHHhc---CC
Confidence 7899999999 9999999998888999 99999998877654322 1 111 2344432 2333333332 24
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.++|.
T Consensus 231 g~D~vid~~g~ 241 (343)
T 2dq4_A 231 GVEVLLEFSGN 241 (343)
T ss_dssp CEEEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 69999999983
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0017 Score=55.74 Aligned_cols=117 Identities=11% Similarity=0.089 Sum_probs=71.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--E-----EEEeeCCh--HHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--V-----VHTCSRNE--VELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~-----v~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
++|.||||+|.||++++..|+..|. + ++++++++ +.++....++.+.. ..+.-+.. .++. .+.+
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~-~~~~---~~~~-- 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA-TDKE---EIAF-- 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE-ESCH---HHHT--
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEE-cCCc---HHHh--
Confidence 5799999999999999999998775 4 99999864 45555555565432 11111111 1111 1112
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCC-eEEEecCCC
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVG-SIVFISSVG 156 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g-~ii~vsS~~ 156 (272)
...|++|++||...... .+ -...++.|+.....+...+ .+. ..+ +++++|...
T Consensus 78 ------~daDvVvitAg~prkpG---~t---R~dll~~N~~i~~~i~~~i----~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 78 ------KDLDVAILVGSMPRRDG---ME---RKDLLKANVKIFKCQGAAL----DKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp ------TTCSEEEECCSCCCCTT---CC---TTTTHHHHHHHHHHHHHHH----HHHSCTTCEEEECSSSH
T ss_pred ------CCCCEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEEcCCch
Confidence 47999999998642211 11 1245677777766555555 443 335 588887653
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0018 Score=55.19 Aligned_cols=115 Identities=15% Similarity=0.097 Sum_probs=71.2
Q ss_pred EEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhCCC--eEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGF--VVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+|.|+|++|.+|..++..|+++| .+|+++++++ .+....++.+... ++.... ..+| .++.+ .
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~-~t~d---~~~a~--------~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL-GPEQ---LPDCL--------K 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE-SGGG---HHHHH--------T
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec-CCCC---HHHHh--------C
Confidence 68999999999999999999888 6899999987 3333334443221 222211 0012 22223 4
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
..|++|+++|...... .+. ...+..|+.....+.+.+.++ .+.+.||++|-+.
T Consensus 68 ~aDvVvi~ag~~~~~g---~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv 120 (314)
T 1mld_A 68 GCDVVVIPAGVPRKPG---MTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISNPV 120 (314)
T ss_dssp TCSEEEECCSCCCCTT---CCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCH
T ss_pred CCCEEEECCCcCCCCC---CcH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCc
Confidence 6899999999743221 111 124566766666666655443 3557888887654
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00035 Score=61.83 Aligned_cols=73 Identities=16% Similarity=0.218 Sum_probs=54.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++.|++++|.|+ |++|+.+++.+...|+ +|++++|+.++.+++.+++. ..+ .+.. ++.+.+
T Consensus 164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g---~~~----~~~~---~l~~~l------- 225 (404)
T 1gpj_A 164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA----VRFD---ELVDHL------- 225 (404)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE----CCGG---GHHHHH-------
T ss_pred cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Cce----ecHH---hHHHHh-------
Confidence 468999999998 9999999999999998 99999999988766665552 221 2222 222222
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
...|+||++.+.
T Consensus 226 -~~aDvVi~at~~ 237 (404)
T 1gpj_A 226 -ARSDVVVSATAA 237 (404)
T ss_dssp -HTCSEEEECCSS
T ss_pred -cCCCEEEEccCC
Confidence 258999999864
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00028 Score=59.87 Aligned_cols=37 Identities=30% Similarity=0.353 Sum_probs=32.4
Q ss_pred CCCCCE-EEEeCCCC-----------------h-HHHHHHHHHHHCCCEEEEeeCC
Q 024125 14 SLKGMT-ALVTGGTR-----------------G-IGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 14 ~l~~k~-vlItGa~~-----------------g-iG~~ia~~l~~~G~~v~~~~r~ 50 (272)
++.||+ ||||+|.. | .|.++|++++++|+.|+++.+.
T Consensus 33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 367888 99998875 5 9999999999999999988774
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00049 Score=59.80 Aligned_cols=86 Identities=17% Similarity=0.157 Sum_probs=51.4
Q ss_pred CC-CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCH--HHHHHHHHHHHHHc
Q 024125 16 KG-MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP--DQREKLIQEVGSKF 92 (272)
Q Consensus 16 ~~-k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 92 (272)
.| .+|||+|++|++|...++.....|++|+.++++.++..+..+.+++.+....+ |..+. +++.+.+.++..+.
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCccchHHHHHHHHHHhhcc
Confidence 47 89999999999999999887778999888887655422222222233433222 21110 12222222222001
Q ss_pred CCCccEEEECCC
Q 024125 93 NGKLNILVNNVG 104 (272)
Q Consensus 93 ~~~id~li~~ag 104 (272)
++.+|++|.++|
T Consensus 243 ~~g~Dvvid~~G 254 (364)
T 1gu7_A 243 GGEAKLALNCVG 254 (364)
T ss_dssp TCCEEEEEESSC
T ss_pred CCCceEEEECCC
Confidence 246999999998
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=5.7e-05 Score=63.29 Aligned_cols=45 Identities=16% Similarity=0.220 Sum_probs=39.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCL 58 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~ 58 (272)
.++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.
T Consensus 113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la 158 (277)
T 3don_A 113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS 158 (277)
T ss_dssp TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 4678999999997 7999999999999999 8999999988755443
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0016 Score=54.13 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=51.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|+++|.|+ ||.|++++..|++.|.+|+++.|+.++.+++. ++. +... +..+ . ...
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~~--~~~~--------------l-~~~ 173 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDCF--MEPP--------------K-SAF 173 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEEE--SSCC--------------S-SCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeEe--cHHH--------------h-ccC
Confidence 899999997 89999999999999999999999999888877 542 1221 2221 1 158
Q ss_pred cEEEECCCCCC
Q 024125 97 NILVNNVGTNI 107 (272)
Q Consensus 97 d~li~~ag~~~ 107 (272)
|+|||+.....
T Consensus 174 DiVInaTp~Gm 184 (269)
T 3phh_A 174 DLIINATSASL 184 (269)
T ss_dssp SEEEECCTTCC
T ss_pred CEEEEcccCCC
Confidence 99999987643
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.006 Score=52.21 Aligned_cols=116 Identities=12% Similarity=0.052 Sum_probs=74.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
..++|.|+|+ |.+|.+++..|+..|. +|+++++++++++....++.+. ...+.....| .+
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~---------- 69 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE---------- 69 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----------
Confidence 3578999996 9999999999999986 8999999998887766556542 1222322222 11
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
.+ ...|++|.++|.... + ..+. ...++.|+.-...+.+.+..+ .+.+.++++|.+.
T Consensus 70 -a~-~~aDvVvi~ag~p~k-p--G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPv 125 (326)
T 3pqe_A 70 -DC-KDADIVCICAGANQK-P--GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPV 125 (326)
T ss_dssp -GG-TTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred -Hh-CCCCEEEEecccCCC-C--CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChH
Confidence 12 468999999996321 1 1122 345666765555555544332 3457888888654
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0008 Score=58.76 Aligned_cols=76 Identities=18% Similarity=0.293 Sum_probs=51.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+||+|++|..+++.+...|++|+.++ ++++.+.. + +.+.... .|.++.+- .+++.+ . +.
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~---~lGa~~v---~~~~~~~~----~~~~~~-~-~g 248 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-R---KLGADDV---IDYKSGSV----EEQLKS-L-KP 248 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-H---HTTCSEE---EETTSSCH----HHHHHT-S-CC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-H---HcCCCEE---EECCchHH----HHHHhh-c-CC
Confidence 589999999999999999998888999998888 44554332 2 3343322 24443222 222222 2 46
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|+|+|.
T Consensus 249 ~D~vid~~g~ 258 (375)
T 2vn8_A 249 FDFILDNVGG 258 (375)
T ss_dssp BSEEEESSCT
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00065 Score=59.07 Aligned_cols=78 Identities=15% Similarity=0.210 Sum_probs=53.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+| +|++|...++.+...|++|+.+++++++.+... ++ +.... .| .+.+++.+.+.++.. +..
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~-~~~~~~~~~v~~~~~--g~g 257 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-AL---GADHG---IN-RLEEDWVERVYALTG--DRG 257 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HH---TCSEE---EE-TTTSCHHHHHHHHHT--TCC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-Hc---CCCEE---Ec-CCcccHHHHHHHHhC--CCC
Confidence 588999999 899999999988889999999999988776543 23 33322 23 222223223333322 126
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++|.|+|
T Consensus 258 ~D~vid~~g 266 (363)
T 3uog_A 258 ADHILEIAG 266 (363)
T ss_dssp EEEEEEETT
T ss_pred ceEEEECCC
Confidence 999999998
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0029 Score=54.38 Aligned_cols=76 Identities=20% Similarity=0.263 Sum_probs=53.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+|+ |++|...++.+...|++|+.+++++++.+... +.+.... .|..+.+-.+.+. +.. +.
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---i~~~~~~~~~~~~----~~~-g~ 232 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR----RLGAEVA---VNARDTDPAAWLQ----KEI-GG 232 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEE---EETTTSCHHHHHH----HHH-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----HcCCCEE---EeCCCcCHHHHHH----HhC-CC
Confidence 5889999997 89999999988889999999999988876443 2343332 2444332222222 223 57
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++|.++|
T Consensus 233 ~d~vid~~g 241 (340)
T 3s2e_A 233 AHGVLVTAV 241 (340)
T ss_dssp EEEEEESSC
T ss_pred CCEEEEeCC
Confidence 999999987
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0015 Score=54.94 Aligned_cols=90 Identities=9% Similarity=0.228 Sum_probs=64.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh------------------HHHHHHHHHHHhC--CCeEEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE------------------VELNKCLKEWQSK--GFVVSGSV 72 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~------------------~~~~~~~~~~~~~--~~~~~~~~ 72 (272)
.|++++|+|.|+ ||+|.++++.|++.|. ++.++|.+. .+.+..++.+.+. ..++..+.
T Consensus 33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~ 111 (292)
T 3h8v_A 33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN 111 (292)
T ss_dssp GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence 467889999987 7999999999999997 899998765 4555566666543 45666677
Q ss_pred ecCCCHHHHHHHHHHHHHH-c--CCCccEEEECCC
Q 024125 73 CDAASPDQREKLIQEVGSK-F--NGKLNILVNNVG 104 (272)
Q Consensus 73 ~D~~~~~~~~~~~~~~~~~-~--~~~id~li~~ag 104 (272)
.++++.+.++.+++.+... . ....|+||.+..
T Consensus 112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D 146 (292)
T 3h8v_A 112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD 146 (292)
T ss_dssp CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence 7787777777666544321 0 025899997765
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0011 Score=56.86 Aligned_cols=118 Identities=8% Similarity=-0.007 Sum_probs=68.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
++-.+++|.|+|+ |.+|.+++..|+..|. +|+++++++++++....++.+.. ..+.... | +.+
T Consensus 5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~~-------- 72 (326)
T 3vku_A 5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EYS-------- 72 (326)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG--------
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cHH--------
Confidence 3456789999996 9999999999999887 89999999988877666665431 1222222 2 111
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
.+ ...|++|.+||..... -++-...++.|+.-.. .+.+.+.+. +.+.++++|.+.
T Consensus 73 ---a~-~~aDiVvi~ag~~~kp------G~tR~dL~~~N~~I~~----~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 73 ---DA-KDADLVVITAGAPQKP------GETRLDLVNKNLKILK----SIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp ---GG-TTCSEEEECCCCC----------------------CHH----HHHHHHHTTTCCSEEEECSSSH
T ss_pred ---Hh-cCCCEEEECCCCCCCC------CchHHHHHHHHHHHHH----HHHHHHHhcCCceEEEEccCch
Confidence 12 4689999999963211 1122344555654444 444444443 457888887654
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0049 Score=52.51 Aligned_cols=118 Identities=16% Similarity=0.055 Sum_probs=73.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC--hHHHHHHHHHHHh------CCCeEEEEEecCCCHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN--EVELNKCLKEWQS------KGFVVSGSVCDAASPDQREK 83 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~--~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~ 83 (272)
|..+.++|.|+|+ |.+|..++..++.+|. +|++++++ ++..+....++.+ ...++.. ..| .+
T Consensus 4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~~---- 74 (315)
T 3tl2_A 4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---YA---- 74 (315)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---GG----
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---HH----
Confidence 4456788999997 9999999999999998 99999998 5555443333322 1122221 112 11
Q ss_pred HHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 84 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
.+ ...|++|.++|...... .+. ...++.|+.-.-.+.+.+.++ .+.+.++++|.+.
T Consensus 75 -------a~-~~aDvVIiaag~p~kpg---~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNPv 130 (315)
T 3tl2_A 75 -------DT-ADSDVVVITAGIARKPG---MSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNPV 130 (315)
T ss_dssp -------GG-TTCSEEEECCSCCCCTT---CCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred -------Hh-CCCCEEEEeCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCChH
Confidence 12 57999999999742211 222 345666765555555555432 3557888888543
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0017 Score=56.74 Aligned_cols=79 Identities=19% Similarity=0.246 Sum_probs=54.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCC--CHHHHHHHHHHHHHHc
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA--SPDQREKLIQEVGSKF 92 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~ 92 (272)
.|++|||+| +|++|..+++.+...| ++|+.+++++++.+... +.+.... .|.. +.+++.+ ++.+..
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~~~~~~~~---~v~~~~ 263 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----EIGADLT---LNRRETSVEERRK---AIMDIT 263 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----HTTCSEE---EETTTSCHHHHHH---HHHHHT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH----HcCCcEE---EeccccCcchHHH---HHHHHh
Confidence 488999999 8999999999888899 59999999988766543 2333322 2333 2334333 333333
Q ss_pred CC-CccEEEECCCC
Q 024125 93 NG-KLNILVNNVGT 105 (272)
Q Consensus 93 ~~-~id~li~~ag~ 105 (272)
++ .+|++|.++|.
T Consensus 264 ~g~g~Dvvid~~g~ 277 (380)
T 1vj0_A 264 HGRGADFILEATGD 277 (380)
T ss_dssp TTSCEEEEEECSSC
T ss_pred CCCCCcEEEECCCC
Confidence 23 59999999984
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00032 Score=60.07 Aligned_cols=75 Identities=24% Similarity=0.233 Sum_probs=49.7
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
+|||+|++|++|..+++.+...|++|+.+++++++.+... +.+.... .|.++.+ .+.++++ .++.+|+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~----~lGa~~~---i~~~~~~--~~~~~~~---~~~~~d~ 219 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKEV---LAREDVM--AERIRPL---DKQRWAA 219 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSEE---EECC-----------C---CSCCEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HcCCcEE---EecCCcH--HHHHHHh---cCCcccE
Confidence 7999999999999999988889999999999877765543 2333322 2444332 1222222 1246999
Q ss_pred EEECCCC
Q 024125 99 LVNNVGT 105 (272)
Q Consensus 99 li~~ag~ 105 (272)
+|+|+|.
T Consensus 220 vid~~g~ 226 (328)
T 1xa0_A 220 AVDPVGG 226 (328)
T ss_dssp EEECSTT
T ss_pred EEECCcH
Confidence 9999984
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.24 E-value=0.011 Score=50.61 Aligned_cols=119 Identities=11% Similarity=0.019 Sum_probs=76.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
....++|.|+|+ |.+|.+++..++.+|. +|+++++++++++....++.+.. ........ .|.++
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~-------- 84 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV-------- 84 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG--------
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH--------
Confidence 346789999997 9999999999999987 89999999988887766665431 11111211 12211
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
+ ...|++|.+||...... .+. .+.++.|+.=...+.+.+.++ .+.+.++++|...
T Consensus 85 ---~-~~aDiVvi~aG~~~kpG---~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPv 139 (331)
T 4aj2_A 85 ---T-ANSKLVIITAGARQQEG---ESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPV 139 (331)
T ss_dssp ---G-TTEEEEEECCSCCCCTT---CCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred ---h-CCCCEEEEccCCCCCCC---ccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChH
Confidence 1 57999999999742211 121 235666665555555555442 4557888888654
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00094 Score=58.10 Aligned_cols=78 Identities=18% Similarity=0.138 Sum_probs=53.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||+||+|++|...++.+.. .|++|+.+++++++.+.+. +.+.... .|.++ +. .+++.+..++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~----~lGad~v---i~~~~--~~---~~~v~~~~~~ 238 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK----SLGAHHV---IDHSK--PL---AAEVAALGLG 238 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----HTTCSEE---ECTTS--CH---HHHHHTTCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH----HcCCCEE---EeCCC--CH---HHHHHHhcCC
Confidence 588999999999999988876655 5889999999988766543 2343322 23332 22 2333333334
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.|+|.
T Consensus 239 g~Dvvid~~g~ 249 (363)
T 4dvj_A 239 APAFVFSTTHT 249 (363)
T ss_dssp CEEEEEECSCH
T ss_pred CceEEEECCCc
Confidence 79999999983
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0038 Score=54.35 Aligned_cols=78 Identities=23% Similarity=0.365 Sum_probs=53.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH---H
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS---K 91 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~ 91 (272)
.|++|||+|+ |++|...++.....|+ +|+.+++++++.+.. +++ +.... .|.++.+ +.+.+.+ .
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~----~~~~i~~~~~~ 249 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV---GATAT---VDPSAGD----VVEAIAGPVGL 249 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSEE---ECTTSSC----HHHHHHSTTSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCEE---ECCCCcC----HHHHHHhhhhc
Confidence 4889999998 8999999998888999 899999988876533 333 33222 3443332 1223332 2
Q ss_pred cCCCccEEEECCCC
Q 024125 92 FNGKLNILVNNVGT 105 (272)
Q Consensus 92 ~~~~id~li~~ag~ 105 (272)
.++.+|++|.++|.
T Consensus 250 ~~gg~Dvvid~~G~ 263 (370)
T 4ej6_A 250 VPGGVDVVIECAGV 263 (370)
T ss_dssp STTCEEEEEECSCC
T ss_pred cCCCCCEEEECCCC
Confidence 23479999999984
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0018 Score=56.45 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=53.7
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
-.|++|||+|++|++|...++.....|++|+.+. ++++.+ ..+ +.+.... .|..+.+ +.+++.+..++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~---~lGa~~v---i~~~~~~----~~~~v~~~t~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAK---SRGAEEV---FDYRAPN----LAQTIRTYTKN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHH---HTTCSEE---EETTSTT----HHHHHHHHTTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHH---HcCCcEE---EECCCch----HHHHHHHHccC
Confidence 4689999999999999999998888999988876 565554 222 3343322 2444332 22333333335
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
++|++|.++|.
T Consensus 231 ~~d~v~d~~g~ 241 (371)
T 3gqv_A 231 NLRYALDCITN 241 (371)
T ss_dssp CCCEEEESSCS
T ss_pred CccEEEECCCc
Confidence 69999999984
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.011 Score=50.49 Aligned_cols=115 Identities=10% Similarity=-0.007 Sum_probs=71.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC------CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+.++|.|+|+ |.+|.+++..|+..|. +|+++++++++.+....++.+. ..++.. ..| .+ .+
T Consensus 6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~----a~--- 73 (324)
T 3gvi_A 6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YA----AI--- 73 (324)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GG----GG---
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HH----HH---
Confidence 4578999998 9999999999999998 9999999988765444444321 223321 122 11 11
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|.++|...... ..-...+..|..-...+.+.+..+ .+.+.++++|...
T Consensus 74 -----~~aDiVIiaag~p~k~G------~~R~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtNPv 127 (324)
T 3gvi_A 74 -----EGADVVIVTAGVPRKPG------MSRDDLLGINLKVMEQVGAGIKKY---APEAFVICITNPL 127 (324)
T ss_dssp -----TTCSEEEECCSCCCC-----------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred -----CCCCEEEEccCcCCCCC------CCHHHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCCCc
Confidence 46899999999632211 111234555655554444444332 3557888888654
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0018 Score=56.09 Aligned_cols=78 Identities=23% Similarity=0.252 Sum_probs=53.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|||+|+ |++|...++..... |++|+.+++++++.+... +.+.... .|.++. +.+.+.++.. +.
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~--~~~~v~~~~~--g~ 253 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADHV---VDARRD--PVKQVMELTR--GR 253 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSEE---EETTSC--HHHHHHHHTT--TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----HhCCCEE---Eeccch--HHHHHHHHhC--CC
Confidence 5889999999 89999999888788 999999999888766543 2333322 344443 3233333321 12
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.++|.
T Consensus 254 g~Dvvid~~G~ 264 (359)
T 1h2b_A 254 GVNVAMDFVGS 264 (359)
T ss_dssp CEEEEEESSCC
T ss_pred CCcEEEECCCC
Confidence 69999999984
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0061 Score=51.38 Aligned_cols=114 Identities=9% Similarity=-0.071 Sum_probs=69.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHh----CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQS----KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++|.|+|+ |.+|.+++..|+++|. +|.+.++++++++....++.+ ......+... +|.++ +
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a----~------ 67 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL----L------ 67 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG----G------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH----h------
Confidence 36889999 9999999999999987 899999999887633333322 1112222211 12221 2
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
...|++|.++|...... .+. ...+..|..-. +.+.+.+.+. +.+.++++|...
T Consensus 68 --~~aDiVViaag~~~kpG---~~R---~dl~~~N~~i~----~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 68 --KGSEIIVVTAGLARKPG---MTR---LDLAHKNAGII----KDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp --TTCSEEEECCCCCCCSS---CCH---HHHHHHHHHHH----HHHHHHHHTTSTTCEEEECSSSH
T ss_pred --CCCCEEEECCCCCCCCC---CcH---HHHHHHHHHHH----HHHHHHHHhhCCCeEEEEeCCcc
Confidence 46899999999742211 222 23455564433 4455555554 457888888654
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0012 Score=57.77 Aligned_cols=80 Identities=23% Similarity=0.237 Sum_probs=54.3
Q ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTG-GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItG-a~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|||.| |+|++|...++.+...|++|+.+++++++.+...+ .+.... .|..+.+ +.+.+.++... .
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~---~~~~~~~-~~~~v~~~t~~--~ 239 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA----QGAVHV---CNAASPT-FMQDLTEALVS--T 239 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH----TTCSCE---EETTSTT-HHHHHHHHHHH--H
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh----CCCcEE---EeCCChH-HHHHHHHHhcC--C
Confidence 578899997 99999999999888889999999999887665542 333322 2333322 22222222222 2
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.|.|.
T Consensus 240 g~d~v~d~~g~ 250 (379)
T 3iup_A 240 GATIAFDATGG 250 (379)
T ss_dssp CCCEEEESCEE
T ss_pred CceEEEECCCc
Confidence 59999999984
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00057 Score=57.31 Aligned_cols=46 Identities=20% Similarity=0.190 Sum_probs=40.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~ 59 (272)
.++++|++||+|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+
T Consensus 118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~ 164 (282)
T 3fbt_A 118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG 164 (282)
T ss_dssp CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 4678999999997 6999999999999998 89999999988776654
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00097 Score=57.85 Aligned_cols=75 Identities=17% Similarity=0.230 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.+|||+|+ |++|...++.+...|++|+.+++++++.+...++ .+.... .|..+.+.++ + .. +.
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~---lGa~~v---i~~~~~~~~~----~---~~-~g 244 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD---LGADDY---VIGSDQAKMS----E---LA-DS 244 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT---SCCSCE---EETTCHHHHH----H---ST-TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH---cCCcee---eccccHHHHH----H---hc-CC
Confidence 6899999995 9999999998888899999999988776554422 233221 3444443222 1 12 46
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|.++|.
T Consensus 245 ~D~vid~~g~ 254 (357)
T 2cf5_A 245 LDYVIDTVPV 254 (357)
T ss_dssp EEEEEECCCS
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=97.07 E-value=0.007 Score=52.29 Aligned_cols=79 Identities=23% Similarity=0.297 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCC--CHHHHHHHHHHHHHHc
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA--SPDQREKLIQEVGSKF 92 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~ 92 (272)
.|++|||+|+ |++|...++.....|+ +|+.+++++++.+... +.+.... .|.. +.++. .+++.+..
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~v---i~~~~~~~~~~---~~~i~~~~ 239 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK----EIGADLV---LQISKESPQEI---ARKVEGQL 239 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCSEE---EECSSCCHHHH---HHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCCCEE---EcCcccccchH---HHHHHHHh
Confidence 4789999996 8999999988888899 8999999888765443 2333322 2333 22332 22333322
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
+..+|++|.++|.
T Consensus 240 ~~g~D~vid~~g~ 252 (356)
T 1pl8_A 240 GCKPEVTIECTGA 252 (356)
T ss_dssp TSCCSEEEECSCC
T ss_pred CCCCCEEEECCCC
Confidence 2369999999983
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0099 Score=51.79 Aligned_cols=45 Identities=20% Similarity=0.150 Sum_probs=39.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~ 59 (272)
.+.+++|+|.|+ |.+|..+++.+...|++|++++|+.++++...+
T Consensus 181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 467899999999 799999999999999999999999988776653
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0021 Score=53.00 Aligned_cols=80 Identities=11% Similarity=0.197 Sum_probs=56.0
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhC--CCeEEEEE
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSK--GFVVSGSV 72 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~~ 72 (272)
|++++|+|.|+ ||+|.++++.|++.|. ++.+++++. .+.+.+.+.+.+. ..++..+.
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 67899999998 6799999999999998 788886542 5566666666653 34555555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 73 ~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
.+++ .+.+.+++ ...|+||++..
T Consensus 105 ~~~~-~~~~~~~~--------~~~DvVi~~~d 127 (251)
T 1zud_1 105 QRLT-GEALKDAV--------ARADVVLDCTD 127 (251)
T ss_dssp SCCC-HHHHHHHH--------HHCSEEEECCS
T ss_pred ccCC-HHHHHHHH--------hcCCEEEECCC
Confidence 4454 34444444 24799998864
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00049 Score=56.85 Aligned_cols=43 Identities=19% Similarity=0.256 Sum_probs=37.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCL 58 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~ 58 (272)
++++ +++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.
T Consensus 106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la 149 (253)
T 3u62_A 106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD 149 (253)
T ss_dssp CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 4678 8999997 8999999999999998 8999999988766554
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.03 Score=47.54 Aligned_cols=117 Identities=15% Similarity=0.080 Sum_probs=72.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC-C--CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEe-cCCCHHHHHHHHHHHHHHcC
Q 024125 18 MTALVTGGTRGIGQATVEELAGL-G--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC-DAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~-G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~ 93 (272)
++|.|+||+|.+|.+++..|+++ + .++++++.++ +.+....++......+..... ...+.++ +
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~----~-------- 67 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA----L-------- 67 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHH----H--------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHH----h--------
Confidence 36889999999999999999875 5 4899999887 444444455543222222211 1112222 2
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|.+||..... ..+ -.+.++.|..-...+.+.+.++ .+.+.++++|.+.
T Consensus 68 ~~aDivii~ag~~rkp---G~~---R~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPv 121 (312)
T 3hhp_A 68 EGADVVLISAGVARKP---GMD---RSDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNPV 121 (312)
T ss_dssp TTCSEEEECCSCSCCT---TCC---HHHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCH
T ss_pred CCCCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCcc
Confidence 5799999999973221 122 2456667766665555555443 3557888887643
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.003 Score=55.75 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=38.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~ 57 (272)
.+.+++|+|+|+ |.+|+.+++.+...|++|++++++.++++..
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 367999999996 8999999999999999999999998887665
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0013 Score=56.08 Aligned_cols=73 Identities=25% Similarity=0.205 Sum_probs=51.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
|+ |||+|++|++|...++.+...|++|+.+++++++.+...+ + +....+...|... ++++ .++.+
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~vi~~~~~~~-------~~~~---~~~~~ 212 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L---GANRILSRDEFAE-------SRPL---EKQLW 212 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H---TCSEEEEGGGSSC-------CCSS---CCCCE
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEEEecCCHHH-------HHhh---cCCCc
Confidence 45 9999999999999999888899999999999888765543 2 3333332222211 1111 12469
Q ss_pred cEEEECCC
Q 024125 97 NILVNNVG 104 (272)
Q Consensus 97 d~li~~ag 104 (272)
|+++.++|
T Consensus 213 d~v~d~~g 220 (324)
T 3nx4_A 213 AGAIDTVG 220 (324)
T ss_dssp EEEEESSC
T ss_pred cEEEECCC
Confidence 99999987
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0016 Score=51.96 Aligned_cols=42 Identities=29% Similarity=0.343 Sum_probs=37.5
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 60 (272)
+++|+||+|.+|+++++.|+++|++|++++|+.++.+++.+.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~ 43 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE 43 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 688999999999999999999999999999998887766554
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0029 Score=55.09 Aligned_cols=74 Identities=19% Similarity=0.256 Sum_probs=53.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.+|||+|+ |++|..+++.+...|++|+.+++++++.+...+ + +... ..|..+.+.+ +++. +.
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l---Ga~~---vi~~~~~~~~----~~~~----~g 257 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L---GADE---VVNSRNADEM----AAHL----KS 257 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSE---EEETTCHHHH----HTTT----TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCcE---EeccccHHHH----HHhh----cC
Confidence 5889999998 899999999888889999999999888765542 3 3222 2355554322 2221 46
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|.++|.
T Consensus 258 ~Dvvid~~g~ 267 (369)
T 1uuf_A 258 FDFILNTVAA 267 (369)
T ss_dssp EEEEEECCSS
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.022 Score=48.58 Aligned_cols=117 Identities=9% Similarity=-0.018 Sum_probs=72.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+.++|.|+|+ |.+|.+++..|+.+|. +|+++++++++.+....++.+. +....+...+ +.+ .+
T Consensus 4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~~----a~----- 71 (321)
T 3p7m_A 4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DYK----DL----- 71 (321)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGG----GG-----
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CHH----HH-----
Confidence 3468889995 9999999999999987 9999999988776555555432 1122221111 111 11
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|.++|...... .+. ...+..|..-...+.+.+..+ .+.+.++++|.+.
T Consensus 72 ---~~aDvVIi~ag~p~k~G---~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv 125 (321)
T 3p7m_A 72 ---ENSDVVIVTAGVPRKPG---MSR---DDLLGINIKVMQTVGEGIKHN---CPNAFVICITNPL 125 (321)
T ss_dssp ---TTCSEEEECCSCCCCTT---CCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred ---CCCCEEEEcCCcCCCCC---CCH---HHHHHHhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence 46899999999742211 222 234556665555555554332 3457888887544
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00041 Score=60.18 Aligned_cols=84 Identities=19% Similarity=0.258 Sum_probs=49.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.+|||+|++|++|...++.....|++++.+.+..+..++..+.+++.+....+ |..+. ..++ +.++.... +.
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~-~~~~-~~~~~~~~-~~ 240 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TEEEL-RRPE-MKNFFKDM-PQ 240 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---EHHHH-HSGG-GGGTTSSS-CC
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---ecCcc-hHHH-HHHHHhCC-CC
Confidence 5899999999999999999877778998877765543322222233344443222 21110 0111 11111111 24
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|.++|.
T Consensus 241 ~Dvvid~~g~ 250 (357)
T 1zsy_A 241 PRLALNCVGG 250 (357)
T ss_dssp CSEEEESSCH
T ss_pred ceEEEECCCc
Confidence 8999999983
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0039 Score=54.32 Aligned_cols=79 Identities=20% Similarity=0.255 Sum_probs=53.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (272)
.|++|||+|+ |++|..+++.+...|+ +|+.+++++++++... +.+.... .|.++ .+++.+.+.++. +
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~~~~~~~~~~~~~---~ 260 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGATDF---VNPNDHSEPISQVLSKMT---N 260 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCCEE---ECGGGCSSCHHHHHHHHH---T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HhCCceE---EeccccchhHHHHHHHHh---C
Confidence 5789999995 9999999998888999 8999999988876543 2233322 23332 112333333332 2
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+.+|++|+++|.
T Consensus 261 ~g~D~vid~~g~ 272 (374)
T 1cdo_A 261 GGVDFSLECVGN 272 (374)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 479999999984
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0011 Score=53.84 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=55.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.+.++|.|+ |.+|+.+++.|.+.|. |++++++++..+.+. . .+.++..|.++.+.++++- . ...
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a~------i-~~a 72 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKAN------V-RGA 72 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHTT------C-TTC
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhcC------c-chh
Confidence 467889997 8999999999999999 999999887765443 2 3567789999987665431 1 468
Q ss_pred cEEEECCC
Q 024125 97 NILVNNVG 104 (272)
Q Consensus 97 d~li~~ag 104 (272)
|.+|.+.+
T Consensus 73 d~vi~~~~ 80 (234)
T 2aef_A 73 RAVIVDLE 80 (234)
T ss_dssp SEEEECCS
T ss_pred cEEEEcCC
Confidence 99987765
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0033 Score=55.42 Aligned_cols=78 Identities=27% Similarity=0.307 Sum_probs=53.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|||+|+ |++|...++.....|+ +|+.+++++++++... ++ +.... .|..+.+ + .+++.+..++
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~-~---~~~i~~~t~g 280 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-EL---GADHV---IDPTKEN-F---VEAVLDYTNG 280 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HH---TCSEE---ECTTTSC-H---HHHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hc---CCCEE---EcCCCCC-H---HHHHHHHhCC
Confidence 5889999998 8999999998888899 8999999988766443 33 33322 2333322 2 2233333323
Q ss_pred -CccEEEECCCC
Q 024125 95 -KLNILVNNVGT 105 (272)
Q Consensus 95 -~id~li~~ag~ 105 (272)
.+|++|.++|.
T Consensus 281 ~g~D~vid~~g~ 292 (404)
T 3ip1_A 281 LGAKLFLEATGV 292 (404)
T ss_dssp CCCSEEEECSSC
T ss_pred CCCCEEEECCCC
Confidence 59999999984
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.046 Score=46.68 Aligned_cols=115 Identities=12% Similarity=0.014 Sum_probs=73.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC-----CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK-----GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
..++|.|+|+ |.+|..++..++.+|. +|++++.++++.+....++.+. ..++. ...|..+
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~t~d~~~----------- 86 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIV-SGKDYSV----------- 86 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEE-EESSSCS-----------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEE-EcCCHHH-----------
Confidence 4578999999 9999999999999987 8999999998877665555432 11221 1233321
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
+ ...|++|.+||......-. . .+.+..|+.-.-.+.+.+.++ .+.+.++++|...
T Consensus 87 ---~-~daDiVIitaG~p~kpG~t--R----~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPv 141 (330)
T 3ldh_A 87 ---S-AGSKLVVITAGARQQEGES--R----LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELG 141 (330)
T ss_dssp ---C-SSCSEEEECCSCCCCSSCC--T----TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred ---h-CCCCEEEEeCCCCCCCCCC--H----HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCcc
Confidence 1 4789999999974322111 1 124444544444444444332 3557888888654
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.025 Score=48.07 Aligned_cols=116 Identities=9% Similarity=0.076 Sum_probs=70.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
..++|.|+|+ |.+|..++..|+.+|. +|++++.++++++....++.+. +..+.+. .| +.++ +
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~a----~---- 72 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYSD----C---- 72 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGGG----G----
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHHH----h----
Confidence 3468999998 9999999999998884 8999999987776544444321 1222222 22 2221 2
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|.++|...... .+. ...+..|..-...+.+.+.++ .+.+.|+++|...
T Consensus 73 ----~~aDvVvi~ag~~~~~g---~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv 126 (317)
T 3d0o_A 73 ----HDADLVVICAGAAQKPG---ETR---LDLVSKNLKIFKSIVGEVMAS---KFDGIFLVATNPV 126 (317)
T ss_dssp ----TTCSEEEECCCCCCCTT---CCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred ----CCCCEEEECCCCCCCCC---CcH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCcH
Confidence 46999999998742211 122 233455554444444444332 3457777776544
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0027 Score=54.64 Aligned_cols=77 Identities=22% Similarity=0.261 Sum_probs=53.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|++|||+|+ |++|...++.+... |++|+.+++++++.+...+ + +.... .|..+. +..++++.+ +
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---i~~~~~---~~~~~~~~~--g 236 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE-L---GADYV---SEMKDA---ESLINKLTD--G 236 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-H---TCSEE---ECHHHH---HHHHHHHHT--T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-h---CCCEE---eccccc---hHHHHHhhc--C
Confidence 6899999999 89999999988888 9999999999887765432 3 22221 232220 122333332 2
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
..+|++|.++|.
T Consensus 237 ~g~D~vid~~g~ 248 (344)
T 2h6e_A 237 LGASIAIDLVGT 248 (344)
T ss_dssp CCEEEEEESSCC
T ss_pred CCccEEEECCCC
Confidence 369999999984
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0038 Score=54.30 Aligned_cols=79 Identities=18% Similarity=0.276 Sum_probs=52.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (272)
.|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+... ++ +.... .|.++ .+++.+.+.++ .+
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~v~~~---~~ 258 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GATEC---INPQDFSKPIQEVLIEM---TD 258 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCSEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCceE---eccccccccHHHHHHHH---hC
Confidence 5789999996 9999999998888899 8999999888876543 33 32222 23322 11222223322 22
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+.+|++|.++|.
T Consensus 259 ~g~D~vid~~g~ 270 (373)
T 2fzw_A 259 GGVDYSFECIGN 270 (373)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCc
Confidence 469999999984
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0048 Score=53.75 Aligned_cols=79 Identities=19% Similarity=0.204 Sum_probs=53.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (272)
.|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+... +.+.... .|.++ .+++.+.+.++. +
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~v---i~~~~~~~~~~~~v~~~~---~ 263 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK----ALGATDC---LNPRELDKPVQDVITELT---A 263 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCSEE---ECGGGCSSCHHHHHHHHH---T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HhCCcEE---EccccccchHHHHHHHHh---C
Confidence 5789999996 9999999998888899 8999999988866543 2233322 23322 112222233322 2
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+.+|++|.++|.
T Consensus 264 ~g~Dvvid~~G~ 275 (376)
T 1e3i_A 264 GGVDYSLDCAGT 275 (376)
T ss_dssp SCBSEEEESSCC
T ss_pred CCccEEEECCCC
Confidence 479999999984
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0048 Score=52.09 Aligned_cols=73 Identities=22% Similarity=0.381 Sum_probs=52.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++.+++++|.|+ |.||+++++.+...|++|++++|+.++.+...+ .+..+ . +. +++++++
T Consensus 153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g~~~--~--~~---~~l~~~l------- 213 (300)
T 2rir_A 153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE----MGLVP--F--HT---DELKEHV------- 213 (300)
T ss_dssp SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCEE--E--EG---GGHHHHS-------
T ss_pred CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCCeE--E--ch---hhHHHHh-------
Confidence 5789999999996 899999999999999999999999876554332 23221 1 11 1222222
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
...|+|+++...
T Consensus 214 -~~aDvVi~~~p~ 225 (300)
T 2rir_A 214 -KDIDICINTIPS 225 (300)
T ss_dssp -TTCSEEEECCSS
T ss_pred -hCCCEEEECCCh
Confidence 468999998874
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.002 Score=54.96 Aligned_cols=73 Identities=19% Similarity=0.282 Sum_probs=49.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+||+|++|...++.+...|++|+.+++. ++ .+..+++ +.... .|..+.+.+.+. . ..
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~~~~~l---Ga~~~---i~~~~~~~~~~~-------~-~g 215 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HAFLKAL---GAEQC---INYHEEDFLLAI-------S-TP 215 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HHHHHHH---TCSEE---EETTTSCHHHHC-------C-SC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HHHHHHc---CCCEE---EeCCCcchhhhh-------c-cC
Confidence 58999999999999999999988899999888753 33 2333333 33322 244333212111 1 46
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|++|.+.|
T Consensus 216 ~D~v~d~~g 224 (321)
T 3tqh_A 216 VDAVIDLVG 224 (321)
T ss_dssp EEEEEESSC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0042 Score=54.12 Aligned_cols=79 Identities=19% Similarity=0.286 Sum_probs=53.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (272)
.|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+... +.+.... .|.++ .+++.+.+.++ .+
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~~~~~~~~~~~~---~~ 259 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK----EVGATEC---VNPQDYKKPIQEVLTEM---SN 259 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCSEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HhCCceE---ecccccchhHHHHHHHH---hC
Confidence 5789999995 9999999998888999 8999999988776543 2233322 23332 11222233332 22
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+.+|++|.++|.
T Consensus 260 ~g~D~vid~~g~ 271 (374)
T 2jhf_A 260 GGVDFSFEVIGR 271 (374)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEECCCC
Confidence 469999999984
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0045 Score=53.83 Aligned_cols=78 Identities=14% Similarity=0.225 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+... ++ +.... .|..+.+ +.+++.+..++
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~----~~~~~~~~~~g 257 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL---GATHV---INSKTQD----PVAAIKEITDG 257 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH---TCSEE---EETTTSC----HHHHHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc---CCCEE---ecCCccC----HHHHHHHhcCC
Confidence 4789999995 8999999988777899 6999999888766543 33 33322 2333222 12223332324
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.++|.
T Consensus 258 g~D~vid~~g~ 268 (371)
T 1f8f_A 258 GVNFALESTGS 268 (371)
T ss_dssp CEEEEEECSCC
T ss_pred CCcEEEECCCC
Confidence 69999999983
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0026 Score=55.56 Aligned_cols=79 Identities=14% Similarity=0.154 Sum_probs=53.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (272)
.|.+|||+|+ |++|...++.+...|+ +|+.+++++++++... +.+.... .|..+ .+++.+.+ .+..+
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~v---i~~~~~~~~~~~~i---~~~~~ 261 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----KFGVNEF---VNPKDHDKPIQEVI---VDLTD 261 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----TTTCCEE---ECGGGCSSCHHHHH---HHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCCcEE---EccccCchhHHHHH---HHhcC
Confidence 4889999998 9999999998888899 8999999988876432 3343322 23321 12222223 23233
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+.+|++|.++|.
T Consensus 262 gg~D~vid~~g~ 273 (378)
T 3uko_A 262 GGVDYSFECIGN 273 (378)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 579999999984
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0043 Score=53.97 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (272)
.|++|||+|+ |++|..+++.....|+ +|+.+++++++.+... +.+.... .|.++ .+++.+.+. +..+
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~v---i~~~~~~~~~~~~i~---~~t~ 259 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGATEC---LNPKDYDKPIYEVIC---EKTN 259 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTCSEE---ECGGGCSSCHHHHHH---HHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH----HcCCcEE---EecccccchHHHHHH---HHhC
Confidence 4789999995 9999999988777899 8999999888766543 2333322 23321 012222222 2222
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+.+|++|.++|.
T Consensus 260 gg~Dvvid~~g~ 271 (373)
T 1p0f_A 260 GGVDYAVECAGR 271 (373)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 479999999984
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0021 Score=55.77 Aligned_cols=75 Identities=16% Similarity=0.137 Sum_probs=51.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+|+ |++|..+++.+...|++|+.+++++++.+...+ + +.... .|..+..+ ..+++. ++
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---~~~~~~~~---~~~~~~----~~ 243 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M---GADHY---IATLEEGD---WGEKYF----DT 243 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EEGGGTSC---HHHHSC----SC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c---CCCEE---EcCcCchH---HHHHhh----cC
Confidence 5889999999 999999999888889999999998887665442 3 33322 23322201 122221 36
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|.++|.
T Consensus 244 ~D~vid~~g~ 253 (360)
T 1piw_A 244 FDLIVVCASS 253 (360)
T ss_dssp EEEEEECCSC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.014 Score=49.55 Aligned_cols=114 Identities=12% Similarity=0.071 Sum_probs=68.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++|.|+|+ |.+|..++..++.+|. +|+++++++++++....++.+. .........|. .++
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~~a----------- 66 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--YGP----------- 66 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--SGG-----------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--HHH-----------
Confidence 36889996 9999999999999886 8999999988766544444421 11222221221 111
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
+ ...|++|.++|...... ++-...++.|+.-. +.+.+.+.+. +.+.++++|.+.
T Consensus 67 ~-~~aDvVii~ag~~~kpG------~~R~dl~~~N~~i~----~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 67 T-EDSDVCIITAGLPRSPG------MSRDDLLAKNTEIV----GGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp G-TTCSEEEECCCC-------------CHHHHHHHHHHH----HHHHHHHHTTCTTCEEEECCSSH
T ss_pred h-CCCCEEEECCCCCCCCC------CCHHHHHHhhHHHH----HHHHHHHHHhCCCcEEEecCCch
Confidence 2 46899999999732111 11234455565444 4444444443 457888887654
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0068 Score=53.25 Aligned_cols=78 Identities=21% Similarity=0.289 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||+|+ |++|...++.....|+ +|+.+++++++++... +.+.. . .|..+.+.+.+.+.++ .++
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~--~--i~~~~~~~~~~~~~~~---~~g 252 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DAGFE--T--IDLRNSAPLRDQIDQI---LGK 252 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TTTCE--E--EETTSSSCHHHHHHHH---HSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCc--E--EcCCCcchHHHHHHHH---hCC
Confidence 5889999996 9999999987777899 8999999988765432 33433 2 3443322111112222 223
Q ss_pred -CccEEEECCCC
Q 024125 95 -KLNILVNNVGT 105 (272)
Q Consensus 95 -~id~li~~ag~ 105 (272)
.+|++|.++|.
T Consensus 253 ~g~Dvvid~~g~ 264 (398)
T 2dph_A 253 PEVDCGVDAVGF 264 (398)
T ss_dssp SCEEEEEECSCT
T ss_pred CCCCEEEECCCC
Confidence 59999999985
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0024 Score=56.14 Aligned_cols=78 Identities=26% Similarity=0.319 Sum_probs=52.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||+|+ |++|...++.....|+ +|+.+++++++++... +.+.. . .|.++.+.+.+.+.++ .++
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~----~lGa~--~--i~~~~~~~~~~~v~~~---t~g 252 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFE--I--ADLSLDTPLHEQIAAL---LGE 252 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCE--E--EETTSSSCHHHHHHHH---HSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH----HcCCc--E--EccCCcchHHHHHHHH---hCC
Confidence 5889999995 9999999988878899 7899999888766543 23443 1 3443322222222222 222
Q ss_pred -CccEEEECCCC
Q 024125 95 -KLNILVNNVGT 105 (272)
Q Consensus 95 -~id~li~~ag~ 105 (272)
.+|++|.++|.
T Consensus 253 ~g~Dvvid~~G~ 264 (398)
T 1kol_A 253 PEVDCAVDAVGF 264 (398)
T ss_dssp SCEEEEEECCCT
T ss_pred CCCCEEEECCCC
Confidence 59999999985
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0075 Score=51.06 Aligned_cols=114 Identities=12% Similarity=0.088 Sum_probs=65.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++|.|+|+ |.+|..++..|+..|. +|+++++++++++....++.... ....+.. + +.++ +
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~--~~~a----~------- 65 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-G--GHSE----L------- 65 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-E--CGGG----G-------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-C--CHHH----h-------
Confidence 36889998 9999999999999998 99999999887765554543321 1111111 1 2111 1
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|.+++...... ..-...+..|+.-...+.+.+.++ .+.+.++++|-..
T Consensus 66 -~~aDvVIi~~~~~~~~g------~~r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP~ 119 (304)
T 2v6b_A 66 -ADAQVVILTAGANQKPG------ESRLDLLEKNADIFRELVPQITRA---APDAVLLVTSNPV 119 (304)
T ss_dssp -TTCSEEEECC------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSSH
T ss_pred -CCCCEEEEcCCCCCCCC------CcHHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCch
Confidence 46899999998632111 111234455555555555555443 3446677766543
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0084 Score=51.11 Aligned_cols=115 Identities=10% Similarity=0.001 Sum_probs=68.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++|.|+|+ |.+|..++..|+.+|. +|++++.++++++....++.+.. ..+.+. . .+.++
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~a----------- 71 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYSD----------- 71 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHHH-----------
Confidence 357889998 9999999999999987 89999999877665555554321 122111 1 11111
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
+ ...|++|.++|..... ..+ -...+..|+.-...+.+.+.++ .+.+.|+++|...
T Consensus 72 ~-~~aDvVii~~g~p~k~---g~~---r~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv 126 (318)
T 1y6j_A 72 V-KDCDVIVVTAGANRKP---GET---RLDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNPV 126 (318)
T ss_dssp G-TTCSEEEECCCC---------C---HHHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSSH
T ss_pred h-CCCCEEEEcCCCCCCC---CcC---HHHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCcH
Confidence 2 4799999999863211 112 2245666666665555655443 4557777776543
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.064 Score=46.13 Aligned_cols=118 Identities=15% Similarity=0.095 Sum_probs=68.8
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCCh--HHHHHHHHHHHhCC--CeEEEEEecCCCHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNE--VELNKCLKEWQSKG--FVVSGSVCDAASPDQREK 83 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~ 83 (272)
++.-+|.|+||+|+||+.++..|++... ++.+++..+ +.++-..-+++... ........ ++.. .
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~---~ 96 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR---V 96 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH---H
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH---H
Confidence 4456899999999999999999987543 688998765 33344444454421 12222221 1221 1
Q ss_pred HHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCeEEEecCC
Q 024125 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS--GVGSIVFISSV 155 (272)
Q Consensus 84 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~ii~vsS~ 155 (272)
. + ...|++|.+||...... .+. ++.++.|..=. +.+.+.+.+. +..+|+.+|..
T Consensus 97 a-------~-~~advVvi~aG~prkpG---mtR---~DLl~~Na~I~----~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 97 A-------F-DGVAIAIMCGAFPRKAG---MER---KDLLEMNARIF----KEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp H-------T-TTCSEEEECCCCCCCTT---CCH---HHHHHHHHHHH----HHHHHHHHHHSCTTCEEEECSSS
T ss_pred H-------h-CCCCEEEECCCCCCCCC---CCH---HHHHHHhHHHH----HHHHHHHHhhccCceEEEEeCCC
Confidence 1 2 57999999999742221 233 34566665444 4444444442 33466666654
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.037 Score=47.25 Aligned_cols=116 Identities=6% Similarity=0.005 Sum_probs=72.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+.++|.|+|+ |.+|..++..++.++. +|++++.++++++....++.+. ...+.+. .| +.++ +
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a----~----- 74 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD----A----- 74 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG----G-----
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH----h-----
Confidence 3478999999 9999999999998875 8999999998887766666543 1222222 22 2211 1
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|..+|...... .+ -...+..|+.-...+.+.+.++ .+.+.|+++|-+.
T Consensus 75 ---~~aDvVii~ag~~~k~g---~~---R~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv 128 (326)
T 2zqz_A 75 ---KDADLVVITAGAPQKPG---ET---RLDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPV 128 (326)
T ss_dssp ---GGCSEEEECCCCC--------C---HHHHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSH
T ss_pred ---CCCCEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcH
Confidence 46899999998732111 12 2234555555544444444332 3567888887654
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.027 Score=47.77 Aligned_cols=72 Identities=14% Similarity=0.065 Sum_probs=51.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC------CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
++|.|+|+ |.+|..++..++..|. +|+++++++++++....++.+. ..++.. ..| .++ +
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d---~~a----~----- 68 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-TNN---YAD----T----- 68 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESC---GGG----G-----
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-CCC---HHH----H-----
Confidence 57999999 9999999999999996 8999999988776555555432 122221 122 111 1
Q ss_pred HcCCCccEEEECCCCC
Q 024125 91 KFNGKLNILVNNVGTN 106 (272)
Q Consensus 91 ~~~~~id~li~~ag~~ 106 (272)
...|++|.++|..
T Consensus 69 ---~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 69 ---ANSDVIVVTSGAP 81 (309)
T ss_dssp ---TTCSEEEECCCC-
T ss_pred ---CCCCEEEEcCCCC
Confidence 4689999999873
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0065 Score=53.21 Aligned_cols=44 Identities=20% Similarity=0.187 Sum_probs=38.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
.+.+++|+|+|+ |.+|+.+++.+...|++|++++|+.++.+...
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE 212 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 578999999996 89999999999999999999999887766543
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0045 Score=53.43 Aligned_cols=78 Identities=21% Similarity=0.250 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|||+|+ |++|...++.....|+ +|+.+++++++++... ++ +.... .|.++.+ +.+++.+..++
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~----~~~~v~~~t~g 233 (352)
T 3fpc_A 166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EY---GATDI---INYKNGD----IVEQILKATDG 233 (352)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HH---TCCEE---ECGGGSC----HHHHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-Hh---CCceE---EcCCCcC----HHHHHHHHcCC
Confidence 4789999985 8999999988878899 7999999888765443 33 33322 2332222 22233333323
Q ss_pred -CccEEEECCCC
Q 024125 95 -KLNILVNNVGT 105 (272)
Q Consensus 95 -~id~li~~ag~ 105 (272)
.+|++|.++|.
T Consensus 234 ~g~D~v~d~~g~ 245 (352)
T 3fpc_A 234 KGVDKVVIAGGD 245 (352)
T ss_dssp CCEEEEEECSSC
T ss_pred CCCCEEEECCCC
Confidence 59999999985
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0076 Score=52.93 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=39.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
.+.+.+|+|.|+ |.+|..+++.+...|++|++++++.++++...
T Consensus 187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 230 (405)
T 4dio_A 187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA 230 (405)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 367889999999 79999999999999999999999998876654
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0026 Score=54.90 Aligned_cols=69 Identities=29% Similarity=0.397 Sum_probs=50.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+|+ |++|...++.+...|++|+.+++++++.+... +.+....+ ++.+.+. ..
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v~-----~~~~~~~-----------~~ 234 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL----SMGVKHFY-----TDPKQCK-----------EE 234 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH----HTTCSEEE-----SSGGGCC-----------SC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----hcCCCeec-----CCHHHHh-----------cC
Confidence 5899999997 99999999988889999999999888776443 23433322 2222211 26
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|.++|.
T Consensus 235 ~D~vid~~g~ 244 (348)
T 3two_A 235 LDFIISTIPT 244 (348)
T ss_dssp EEEEEECCCS
T ss_pred CCEEEECCCc
Confidence 9999999985
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.059 Score=46.09 Aligned_cols=78 Identities=10% Similarity=-0.074 Sum_probs=53.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC------CCeEEEEEecCCCHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~ 85 (272)
|....++|.|.|+ |.+|.+++..|+..|. +|++.++++++++.....+... ..++.. . +|.+ +.+
T Consensus 5 ~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---ea~ 76 (331)
T 1pzg_A 5 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYE---AAL 76 (331)
T ss_dssp CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHH---HHH
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHH---HHh
Confidence 3344568999998 9999999999999997 9999999988777644333221 122221 1 2322 122
Q ss_pred HHHHHHcCCCccEEEECCCCC
Q 024125 86 QEVGSKFNGKLNILVNNVGTN 106 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~ 106 (272)
...|++|.++|..
T Consensus 77 --------~~aDiVi~a~g~p 89 (331)
T 1pzg_A 77 --------TGADCVIVTAGLT 89 (331)
T ss_dssp --------TTCSEEEECCSCS
T ss_pred --------CCCCEEEEccCCC
Confidence 4689999999864
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.036 Score=46.56 Aligned_cols=114 Identities=8% Similarity=-0.083 Sum_probs=70.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHh----CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQS----KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++|-|+|+ |+||+.++..|+.++. ++++++.++++.+....++.+ ..........+ |.++
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~~----------- 66 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYSL----------- 66 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGGG-----------
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHHH-----------
Confidence 35788895 9999999999998875 799999998777655555543 12222222221 1221
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
+ ..-|++|..||...... .+. ++.++.|..= .+.+.+.+.+. +.+.++.+|.+.
T Consensus 67 ~-~~aDvVvitAG~prkpG---mtR---~dLl~~Na~I----~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 67 L-KGSEIIVVTAGLARKPG---MTR---LDLAHKNAGI----IKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp G-TTCSEEEECCCCCCCSS---SCH---HHHHHHHHHH----HHHHHHHHHTTSTTCEEEECSSSH
T ss_pred h-CCCCEEEEecCCCCCCC---Cch---HHHHHHHHHH----HHHHHHHHHhcCCceEEEEecCcc
Confidence 1 46899999999743221 233 3456666543 44555555554 446777777643
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.63 E-value=0.005 Score=53.45 Aligned_cols=47 Identities=23% Similarity=0.303 Sum_probs=41.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 61 (272)
+++||+|+|.|. |.+|+.+++.|.+.|++|++.+++.+++++..+++
T Consensus 170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ 216 (364)
T 1leh_A 170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 216 (364)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 689999999997 78999999999999999999999988877776654
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0048 Score=54.61 Aligned_cols=58 Identities=22% Similarity=0.189 Sum_probs=42.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 81 (272)
+..|+|.|. |.+|+.+++.|.++|..|++++++++..+.+.+ .+ +.++..|.++.+.+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g--~~vi~GDat~~~~L 61 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG--MKVFYGDATRMDLL 61 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT--CCCEESCTTCHHHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC--CeEEEcCCCCHHHH
Confidence 356888886 889999999999999999999999988765542 12 22345566555543
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0057 Score=52.46 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=31.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~ 50 (272)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence 367899999987 6999999999999998 78888764
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0096 Score=51.15 Aligned_cols=78 Identities=21% Similarity=0.261 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.++||+|+ |++|...++..... |++|+.+++++++.+... +.+....+ |..+ + ..+.+.++... .
T Consensus 171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~----~lGa~~~i---~~~~-~-~~~~v~~~t~g--~ 238 (345)
T 3jv7_A 171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR----EVGADAAV---KSGA-G-AADAIRELTGG--Q 238 (345)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH----HTTCSEEE---ECST-T-HHHHHHHHHGG--G
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCCEEE---cCCC-c-HHHHHHHHhCC--C
Confidence 5889999998 99999988877666 679999999988876443 23333322 2222 2 22222222211 2
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|+++.++|.
T Consensus 239 g~d~v~d~~G~ 249 (345)
T 3jv7_A 239 GATAVFDFVGA 249 (345)
T ss_dssp CEEEEEESSCC
T ss_pred CCeEEEECCCC
Confidence 69999999984
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.024 Score=48.10 Aligned_cols=114 Identities=15% Similarity=0.068 Sum_probs=72.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++|.|+|+ |.+|..++..++.++ .+|++++.++++++....++.+. ...+.+. .+ +.++ +
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a----~------- 65 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD----L------- 65 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG----G-------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH----h-------
Confidence 46889998 999999999999887 48999999998888766666542 1122222 22 2222 2
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|..+|...... .+.. ..+..|..-...+.+.+.++ .+.+.|+++|-+.
T Consensus 66 -~~aD~Vii~ag~~~~~g---~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv 119 (310)
T 2xxj_A 66 -EGARAVVLAAGVAQRPG---ETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPV 119 (310)
T ss_dssp -TTEEEEEECCCCCCCTT---CCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred -CCCCEEEECCCCCCCCC---cCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence 47999999998742211 2222 34555555444444444332 4557888887654
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.029 Score=48.04 Aligned_cols=79 Identities=15% Similarity=0.182 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|++|||+|+ |++|...++.+...|+. ++.+++++++++..+ +.+....+.. +-.+.. +..+++.+. .
T Consensus 160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~----~lGa~~~i~~-~~~~~~---~~~~~~~~~--~ 228 (346)
T 4a2c_A 160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK----SFGAMQTFNS-SEMSAP---QMQSVLREL--R 228 (346)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCSEEEET-TTSCHH---HHHHHHGGG--C
T ss_pred CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH----HcCCeEEEeC-CCCCHH---HHHHhhccc--C
Confidence 5899999987 89999999988889985 567788887755332 3343333222 222222 233333222 4
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
..|+++.++|.
T Consensus 229 g~d~v~d~~G~ 239 (346)
T 4a2c_A 229 FNQLILETAGV 239 (346)
T ss_dssp SSEEEEECSCS
T ss_pred Ccccccccccc
Confidence 68999999983
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.037 Score=47.12 Aligned_cols=113 Identities=9% Similarity=0.028 Sum_probs=69.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++|.|+|+ |.+|..++..++.++. +|++++.++++++....++.+. ...+.+. .| +.++ +
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~~a-----------~ 70 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EYSD-----------C 70 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CGGG-----------G
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CHHH-----------h
Confidence 68999998 9999999999998876 8999999998888766666543 1222222 22 2211 2
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
...|++|..+|...... ..-...+..|+.-. +.+.+.+.+. +.+.++++|-+.
T Consensus 71 -~~aDvVii~ag~~~~~g------~~R~dl~~~n~~i~----~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 71 -KDADLVVITAGAPQKPG------ESRLDLVNKNLNIL----SSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp -TTCSEEEECCCC----------------CHHHHHHHH----HHHHHHHHHTTCCSEEEECSSSH
T ss_pred -CCCCEEEECCCCCCCCC------CCHHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEeCCcH
Confidence 47999999998732111 11122344454444 4444444443 557888887654
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0057 Score=52.88 Aligned_cols=76 Identities=14% Similarity=0.199 Sum_probs=50.8
Q ss_pred CCCCEEEEeCCCChHHHHH-HHHH-HHCCCE-EEEeeCChH---HHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQAT-VEEL-AGLGAV-VHTCSRNEV---ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~i-a~~l-~~~G~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+++++|||+|+ |++|... ++.+ ...|++ |+.++++++ +.+... +.+.... |..+. ++.+ +.++
T Consensus 171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~~v----~~~~~-~~~~-i~~~ 239 (357)
T 2b5w_A 171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----ELDATYV----DSRQT-PVED-VPDV 239 (357)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----HTTCEEE----ETTTS-CGGG-HHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----HcCCccc----CCCcc-CHHH-HHHh
Confidence 44599999999 9999999 7766 567997 999999877 655432 2333321 44332 2222 3333
Q ss_pred HHHcCCCccEEEECCCC
Q 024125 89 GSKFNGKLNILVNNVGT 105 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~ 105 (272)
. +.+|++|.++|.
T Consensus 240 ---~-gg~Dvvid~~g~ 252 (357)
T 2b5w_A 240 ---Y-EQMDFIYEATGF 252 (357)
T ss_dssp ---S-CCEEEEEECSCC
T ss_pred ---C-CCCCEEEECCCC
Confidence 2 479999999983
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.035 Score=47.26 Aligned_cols=114 Identities=8% Similarity=0.012 Sum_probs=68.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++.|.|+ |.+|.+++..|++.|. +|+++++++++++....++... ........ ++.+. +
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~~----~------- 65 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYAD----L------- 65 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGGG----G-------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHHH----h-------
Confidence 36889998 9999999999999998 9999999988877665444321 11111111 22221 2
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|.+++..... ..+.. ..+..|+.-...+.+.+.++ .+.+.+|+++...
T Consensus 66 -~~aDvViiav~~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~~~~~ii~~tNp~ 119 (319)
T 1a5z_A 66 -KGSDVVIVAAGVPQKP---GETRL---QLLGRNARVMKEIARNVSKY---APDSIVIVVTNPV 119 (319)
T ss_dssp -TTCSEEEECCCCCCCS---SCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred -CCCCEEEEccCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCCcH
Confidence 4689999999863311 11111 23444544444444444333 2446777776543
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.02 Score=47.60 Aligned_cols=162 Identities=13% Similarity=0.132 Sum_probs=92.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEE-EeeCChHHH--H-----------------HHHHHHHhCCCeEEEEEecC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGL-GAVVH-TCSRNEVEL--N-----------------KCLKEWQSKGFVVSGSVCDA 75 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~-G~~v~-~~~r~~~~~--~-----------------~~~~~~~~~~~~~~~~~~D~ 75 (272)
..+|.|+|++|.+|+.+++.+.+. |.+|+ +++++.+.. . .+.+.+ . ..++ ..|.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l-~-~~Dv---VIDf 79 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK-D-DFDV---FIDF 79 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT-T-SCSE---EEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHh-c-CCCE---EEEc
Confidence 358999999999999999998865 66665 556554220 0 000001 1 2233 3578
Q ss_pred CCHHHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHH----------H----hHHHHHHHHHHHHHH
Q 024125 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT----------N----FESTYHLCQLVYPLL 141 (272)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~----------N----~~~~~~l~~~~~~~~ 141 (272)
+.++...+.+..+.+. ++++++-..|. +.++.+++.+. | +.-.+.+++.+.++|
T Consensus 80 t~p~~~~~~~~~a~~~---G~~vVigTtG~---------~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~ 147 (273)
T 1dih_A 80 TRPEGTLNHLAFCRQH---GKGMVIGTTGF---------DEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVM 147 (273)
T ss_dssp SCHHHHHHHHHHHHHT---TCEEEECCCCC---------CHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhC---CCCEEEECCCC---------CHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhc
Confidence 8898888887777654 47787766653 34443333321 1 112344555565555
Q ss_pred HcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHc---------------cCCeeEEEeeCCcc
Q 024125 142 KASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA---------------KDNIRTNSVAPWYT 200 (272)
Q Consensus 142 ~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~---------------~~~i~v~~v~PG~v 200 (272)
... -.|=.+= ......-..+|+.++...+.+.+.+...+. +.+|.|.++.-|-+
T Consensus 148 ~~~--~dieiiE---~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~v 216 (273)
T 1dih_A 148 GDY--TDIEIIE---AHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDI 216 (273)
T ss_dssp TTT--SEEEEEE---EECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTC
T ss_pred CCC--CCEEEEE---eecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCC
Confidence 311 1221111 122233356789999888888766554321 34688888885533
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0049 Score=53.37 Aligned_cols=81 Identities=19% Similarity=0.186 Sum_probs=57.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhC--CCeEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSK--GFVVSGS 71 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~ 71 (272)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+...+.+.+. ..++..+
T Consensus 115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI 193 (353)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence 356889999998 7999999999999998 888888753 2445555555543 3466666
Q ss_pred EecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
..+++...++.. + ...|+||.+..
T Consensus 194 ~~~i~~~~~~~~--------~-~~~DlVvd~~D 217 (353)
T 3h5n_A 194 ALNINDYTDLHK--------V-PEADIWVVSAD 217 (353)
T ss_dssp ECCCCSGGGGGG--------S-CCCSEEEECCC
T ss_pred ecccCchhhhhH--------h-ccCCEEEEecC
Confidence 666665543222 2 57899998764
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.078 Score=44.86 Aligned_cols=112 Identities=14% Similarity=0.071 Sum_probs=69.6
Q ss_pred EEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhC------CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+|.|.|+ |.+|..++..|++. |.+|+++++++++++....++.+. ..++.. ..| .++ +
T Consensus 2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d---~~~----l----- 67 (310)
T 1guz_A 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-SND---YAD----T----- 67 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-ESC---GGG----G-----
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-CCC---HHH----H-----
Confidence 6889998 99999999999986 679999999988777554333321 112221 122 111 1
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
...|++|.+++..... ..+ -...+..|+.-...+.+.+.++ .+.+.+++++...
T Consensus 68 ---~~aDvViiav~~p~~~---g~~---r~dl~~~n~~i~~~i~~~i~~~---~~~~~viv~tNP~ 121 (310)
T 1guz_A 68 ---ANSDIVIITAGLPRKP---GMT---REDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSNPL 121 (310)
T ss_dssp ---TTCSEEEECCSCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCSSH
T ss_pred ---CCCCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEEcCch
Confidence 4689999999853211 111 2245556666555556665554 2446778876543
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0036 Score=52.16 Aligned_cols=39 Identities=26% Similarity=0.453 Sum_probs=35.6
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+++||+++|.|.++-+|+.+++.|++.|++|.++.|+.
T Consensus 156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t 194 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT 194 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence 468999999999999999999999999999999987643
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.011 Score=49.79 Aligned_cols=50 Identities=24% Similarity=0.189 Sum_probs=37.8
Q ss_pred cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 024125 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (272)
Q Consensus 9 ~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~ 59 (272)
+.|.|.-+-++|.|.|+ |.+|..++..|++.|++|++++|+++.++...+
T Consensus 7 ~~~~~~~~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~ 56 (302)
T 1f0y_A 7 SASAKKIIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK 56 (302)
T ss_dssp -----CCCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred ccccccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 33444333467899988 899999999999999999999999988776543
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0061 Score=50.82 Aligned_cols=46 Identities=26% Similarity=0.252 Sum_probs=39.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~ 59 (272)
.++++++++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.+
T Consensus 125 ~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~ 170 (275)
T 2hk9_A 125 PEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ 170 (275)
T ss_dssp TTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT
T ss_pred CCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence 3578999999996 799999999999999999999999887766543
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0075 Score=54.18 Aligned_cols=75 Identities=16% Similarity=0.217 Sum_probs=58.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.++++|.|+ |.+|+++|+.|.++|.+|++++++++..+.+.+++ .+..+..|.++++-++++= . ...
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Ag------i-~~a 69 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAG------A-QDA 69 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHT------T-TTC
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcC------C-CcC
Confidence 356788887 68999999999999999999999999887766543 4667889999998665441 1 468
Q ss_pred cEEEECCC
Q 024125 97 NILVNNVG 104 (272)
Q Consensus 97 d~li~~ag 104 (272)
|.+|.+.+
T Consensus 70 d~~ia~t~ 77 (461)
T 4g65_A 70 DMLVAVTN 77 (461)
T ss_dssp SEEEECCS
T ss_pred CEEEEEcC
Confidence 88876544
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0027 Score=54.05 Aligned_cols=83 Identities=17% Similarity=0.102 Sum_probs=54.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+++|++++|.|++.-+|+-+++.|++.|++|.+++|+..+..+..+++...... ......++.+++++.+
T Consensus 173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~--~t~~~~t~~~~L~e~l------- 243 (320)
T 1edz_A 173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHH--VEDLGEYSEDLLKKCS------- 243 (320)
T ss_dssp CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCE--EEEEEECCHHHHHHHH-------
T ss_pred CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhccc--ccccccccHhHHHHHh-------
Confidence 4789999999999988999999999999999999988743321111111110011 1111113345555555
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
..-|+||.+.|.
T Consensus 244 -~~ADIVIsAtg~ 255 (320)
T 1edz_A 244 -LDSDVVITGVPS 255 (320)
T ss_dssp -HHCSEEEECCCC
T ss_pred -ccCCEEEECCCC
Confidence 357999999885
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.069 Score=44.46 Aligned_cols=82 Identities=13% Similarity=0.096 Sum_probs=57.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHHHHHHHHHHH--------h--CCCeEEEEEecCCCHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVELNKCLKEWQ--------S--KGFVVSGSVCDAASPDQREK 83 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~---~v~~~~r~~~~~~~~~~~~~--------~--~~~~~~~~~~D~~~~~~~~~ 83 (272)
.+++.|.|+ |-+|.++++.|++.|. +|++++|++++.+++.+++. + ...++.++.+ .++.+++
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~ 78 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM 78 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence 366888877 8999999999999998 89999999988877765321 0 1234444433 3456677
Q ss_pred HHHHHHHH-cCCCcc-EEEECCC
Q 024125 84 LIQEVGSK-FNGKLN-ILVNNVG 104 (272)
Q Consensus 84 ~~~~~~~~-~~~~id-~li~~ag 104 (272)
+++++... + +.+ +||++++
T Consensus 79 vl~~l~~~~l--~~~~iiiS~~a 99 (280)
T 3tri_A 79 VCEELKDILS--ETKILVISLAV 99 (280)
T ss_dssp HHHHHHHHHH--TTTCEEEECCT
T ss_pred HHHHHHhhcc--CCCeEEEEecC
Confidence 77777665 5 234 7777655
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.11 Score=44.23 Aligned_cols=72 Identities=13% Similarity=0.070 Sum_probs=51.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC------CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
++|.|+|+ |.+|..++..|+..|. +|+++++++++++.....+... ..++.. ..| .++ +
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d---~~a----l----- 70 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNT---YDD----L----- 70 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECC---GGG----G-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-CCC---HHH----h-----
Confidence 57899998 9999999999999998 8999999988777555444321 222221 122 211 1
Q ss_pred HcCCCccEEEECCCCC
Q 024125 91 KFNGKLNILVNNVGTN 106 (272)
Q Consensus 91 ~~~~~id~li~~ag~~ 106 (272)
...|++|.++|..
T Consensus 71 ---~~aD~Vi~a~g~p 83 (322)
T 1t2d_A 71 ---AGADVVIVTAGFT 83 (322)
T ss_dssp ---TTCSEEEECCSCS
T ss_pred ---CCCCEEEEeCCCC
Confidence 4689999999863
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.008 Score=49.82 Aligned_cols=36 Identities=14% Similarity=0.171 Sum_probs=33.9
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
++||+++|.|.++-+|+.+++.|++.|++|.++.++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 899999999999999999999999999999998764
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.011 Score=48.90 Aligned_cols=47 Identities=32% Similarity=0.368 Sum_probs=40.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 61 (272)
.++++ +++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.+++
T Consensus 113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~ 159 (263)
T 2d5c_A 113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF 159 (263)
T ss_dssp CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 46788 9999997 77999999999999999999999998877776654
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.023 Score=52.37 Aligned_cols=89 Identities=11% Similarity=0.123 Sum_probs=55.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhC--CCeEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSK--GFVVSGS 71 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~ 71 (272)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+...+.+.+. ..++..+
T Consensus 323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~ 401 (615)
T 4gsl_A 323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 401 (615)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence 367899999998 6999999999999998 888888753 3455566666554 3455555
Q ss_pred EecC-------CCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 72 VCDA-------ASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 72 ~~D~-------~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
..++ ++.+...--.+.+.+.+ ...|+||+|..
T Consensus 402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll-~~~DlVvd~tD 440 (615)
T 4gsl_A 402 KLSIPMIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVD 440 (615)
T ss_dssp CCCCCCTTCCCSCHHHHHHHHHHHHHHH-HHCSEEEECCS
T ss_pred eccccccCccccchhhhcCCHHHHHHHh-hcCCEEEecCC
Confidence 4433 22211000011111222 35899998876
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.028 Score=46.23 Aligned_cols=86 Identities=13% Similarity=0.126 Sum_probs=57.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHH--------hC--CCeEEEEEecCCCHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQ--------SK--GFVVSGSVCDAASPDQREK 83 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~--------~~--~~~~~~~~~D~~~~~~~~~ 83 (272)
+.++++.|.|+ |.+|..+++.|.+.|.+ |.+++|++++.+++.+.+. +. ..++.++ ......+.+
T Consensus 8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~---av~~~~~~~ 83 (266)
T 3d1l_A 8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIV---SLKDSAFAE 83 (266)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEE---CCCHHHHHH
T ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEE---ecCHHHHHH
Confidence 34567889996 99999999999999998 8899999988877665421 10 1122222 122445677
Q ss_pred HHHHHHHHcCCCccEEEECCCC
Q 024125 84 LIQEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 84 ~~~~~~~~~~~~id~li~~ag~ 105 (272)
+++++.... .+=.+++++.+.
T Consensus 84 v~~~l~~~~-~~~~ivv~~s~~ 104 (266)
T 3d1l_A 84 LLQGIVEGK-REEALMVHTAGS 104 (266)
T ss_dssp HHHHHHTTC-CTTCEEEECCTT
T ss_pred HHHHHHhhc-CCCcEEEECCCC
Confidence 777776543 233467777654
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=96.13 E-value=0.067 Score=45.37 Aligned_cols=40 Identities=15% Similarity=-0.086 Sum_probs=35.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKC 57 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~ 57 (272)
.++|.|.|+ |.+|..++..|++.|. +|++.+++++.++..
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~ 44 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK 44 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence 367999998 8999999999999998 999999998776653
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0042 Score=53.02 Aligned_cols=40 Identities=30% Similarity=0.326 Sum_probs=35.0
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
+|||+|++|++|..+++.+...|++|+.+++++++.+...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~ 192 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK 192 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 7999999999999999988888999999999877765443
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.015 Score=48.86 Aligned_cols=72 Identities=18% Similarity=0.317 Sum_probs=51.6
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++.||+++|.|+ |.||+++++.+...|++|++++|+.++.+... +.+..+ . +. +++++++
T Consensus 151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g~~~--~--~~---~~l~~~l------- 211 (293)
T 3d4o_A 151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA----EMGMEP--F--HI---SKAAQEL------- 211 (293)
T ss_dssp SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTSEE--E--EG---GGHHHHT-------
T ss_pred CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCCCee--c--Ch---hhHHHHh-------
Confidence 4689999999995 89999999999999999999999987654332 223222 1 21 1222222
Q ss_pred CCCccEEEECCC
Q 024125 93 NGKLNILVNNVG 104 (272)
Q Consensus 93 ~~~id~li~~ag 104 (272)
...|+|+++..
T Consensus 212 -~~aDvVi~~~p 222 (293)
T 3d4o_A 212 -RDVDVCINTIP 222 (293)
T ss_dssp -TTCSEEEECCS
T ss_pred -cCCCEEEECCC
Confidence 46899999875
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0079 Score=50.13 Aligned_cols=39 Identities=31% Similarity=0.331 Sum_probs=35.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+++||+++|.|.++-+|+.+++.|++.|++|.++.++.
T Consensus 157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T 195 (286)
T 4a5o_A 157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT 195 (286)
T ss_dssp CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence 468999999999999999999999999999999987643
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0093 Score=50.07 Aligned_cols=39 Identities=21% Similarity=0.230 Sum_probs=35.6
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+++||+++|.|.++-+|+.+++.|++.|++|.++.|+.
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT 199 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 468999999999999999999999999999999998743
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.18 Score=43.04 Aligned_cols=72 Identities=11% Similarity=0.014 Sum_probs=50.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC------CCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
++|.|+|+ |.+|..++..|+..|. +|++.++++++++.....+... ..++.. ..| .++ +
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d---~~a----l----- 80 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENN---YEY----L----- 80 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESC---GGG----G-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCC---HHH----H-----
Confidence 58999998 9999999999999998 9999999988777543333221 122321 122 111 1
Q ss_pred HcCCCccEEEECCCCC
Q 024125 91 KFNGKLNILVNNVGTN 106 (272)
Q Consensus 91 ~~~~~id~li~~ag~~ 106 (272)
...|++|.++|..
T Consensus 81 ---~~aD~VI~avg~p 93 (328)
T 2hjr_A 81 ---QNSDVVIITAGVP 93 (328)
T ss_dssp ---TTCSEEEECCSCC
T ss_pred ---CCCCEEEEcCCCC
Confidence 4689999999864
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.031 Score=47.90 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=49.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|||+|+ |++|...+..+... |++|+.+++++++++... +.+....+ |.++.+..+ ++.+..++
T Consensus 163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~----~~Ga~~~i---~~~~~~~~~----~v~~~t~g 230 (348)
T 4eez_A 163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK----KIGADVTI---NSGDVNPVD----EIKKITGG 230 (348)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH----HTTCSEEE---EC-CCCHHH----HHHHHTTS
T ss_pred CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh----hcCCeEEE---eCCCCCHHH----HhhhhcCC
Confidence 5889999987 77887777777765 679999999988765333 33444333 333332222 22222223
Q ss_pred -CccEEEECCCC
Q 024125 95 -KLNILVNNVGT 105 (272)
Q Consensus 95 -~id~li~~ag~ 105 (272)
.+|.++.+++.
T Consensus 231 ~g~d~~~~~~~~ 242 (348)
T 4eez_A 231 LGVQSAIVCAVA 242 (348)
T ss_dssp SCEEEEEECCSC
T ss_pred CCceEEEEeccC
Confidence 48899988873
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.072 Score=45.07 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=68.2
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+|.|+|+ |.+|..++..++..|. +|++.++++++++....++.+. .....+... +|.++ +
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a----~-------- 65 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYED----M-------- 65 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGGG----G--------
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHHH----h--------
Confidence 3778998 9999999999998887 7999999988776655554431 112222221 12211 2
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecCCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVG 156 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS~~ 156 (272)
...|++|..+|...... .+.. ..+..|..-. +.+.+.+.+ .+.+.+|++|-..
T Consensus 66 ~~aD~Vi~~ag~~~k~G---~~r~---dl~~~n~~i~----~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 66 RGSDIVLVTAGIGRKPG---MTRE---QLLEANANTM----ADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp TTCSEEEECCSCCCCSS---CCTH---HHHHHHHHHH----HHHHHHHHHHCTTCEEEECCSSH
T ss_pred CCCCEEEEeCCCCCCCC---CcHH---HHHHHHHHHH----HHHHHHHHHHCCCeEEEEeCCch
Confidence 47999999999743221 1211 2344444433 444444443 3557888887643
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.039 Score=46.03 Aligned_cols=84 Identities=17% Similarity=0.059 Sum_probs=56.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH-------HHh--CCCeEEEEEecCCCHHHHHHHH---
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-------WQS--KGFVVSGSVCDAASPDQREKLI--- 85 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~--- 85 (272)
+++.|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+. +.+ ...++.+ .-+.+...+++++
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi--~~vp~~~~~~~v~~~~ 78 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTF--AMLADPAAAEEVCFGK 78 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEE--ECCSSHHHHHHHHHST
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEE--EEcCCHHHHHHHHcCc
Confidence 56788875 8999999999999999999999998887665431 000 0123332 3344566777777
Q ss_pred HHHHHHcCCCccEEEECCCC
Q 024125 86 QEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~ 105 (272)
+.+.... .+-.++|++.+.
T Consensus 79 ~~l~~~l-~~~~~vi~~st~ 97 (287)
T 3pef_A 79 HGVLEGI-GEGRGYVDMSTV 97 (287)
T ss_dssp TCHHHHC-CTTCEEEECSCC
T ss_pred chHhhcC-CCCCEEEeCCCC
Confidence 6666554 334567777543
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.035 Score=44.12 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=51.6
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
..+.++.+++.|.| .|.+|.++++.|++.|.+|++++|+++ .....++.++.+- ...++++++++..
T Consensus 13 ~~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~---~~~~~~v~~~l~~ 79 (209)
T 2raf_A 13 ENLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP---YPALAALAKQYAT 79 (209)
T ss_dssp -------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC---HHHHHHHHHHTHH
T ss_pred cccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC---cHHHHHHHHHHHH
Confidence 34567889999999 799999999999999999999999865 1112345444332 5667778877766
Q ss_pred HcCCCccEEEECCC
Q 024125 91 KFNGKLNILVNNVG 104 (272)
Q Consensus 91 ~~~~~id~li~~ag 104 (272)
.. . -.++++++.
T Consensus 80 ~~-~-~~~vi~~~~ 91 (209)
T 2raf_A 80 QL-K-GKIVVDITN 91 (209)
T ss_dssp HH-T-TSEEEECCC
T ss_pred hc-C-CCEEEEECC
Confidence 55 2 235666554
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=95.96 E-value=0.016 Score=53.31 Aligned_cols=60 Identities=12% Similarity=0.126 Sum_probs=44.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhC--CCeEEEE
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN-------------------EVELNKCLKEWQSK--GFVVSGS 71 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~-------------------~~~~~~~~~~~~~~--~~~~~~~ 71 (272)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+ ..+.+...+.+.+. ..++..+
T Consensus 324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~ 402 (598)
T 3vh1_A 324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 402 (598)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence 467899999987 6999999999999998 78888653 24566666666653 3455555
Q ss_pred Eec
Q 024125 72 VCD 74 (272)
Q Consensus 72 ~~D 74 (272)
..+
T Consensus 403 ~~~ 405 (598)
T 3vh1_A 403 KLS 405 (598)
T ss_dssp CCC
T ss_pred ecc
Confidence 544
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0085 Score=49.94 Aligned_cols=38 Identities=29% Similarity=0.410 Sum_probs=34.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
.+++||+++|.|.++-+|+.+++.|.+.|++|.++.|+
T Consensus 157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 194 (285)
T 3l07_A 157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF 194 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 46899999999999999999999999999999888764
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.016 Score=51.77 Aligned_cols=79 Identities=23% Similarity=0.293 Sum_probs=54.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++|+++|.|. |+.|.++|+.|.++|++|.+.+++........+.+++.+..+.. ... .++ .+
T Consensus 5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~--g~~--~~~---~~------- 69 (451)
T 3lk7_A 5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVC--GSH--PLE---LL------- 69 (451)
T ss_dssp CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEE--SCC--CGG---GG-------
T ss_pred hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEE--CCC--hHH---hh-------
Confidence 4678999999999 78999999999999999999998654222334455555655432 111 110 11
Q ss_pred CCC-ccEEEECCCCCC
Q 024125 93 NGK-LNILVNNVGTNI 107 (272)
Q Consensus 93 ~~~-id~li~~ag~~~ 107 (272)
.. .|.||..+|+..
T Consensus 70 -~~~~d~vv~spgi~~ 84 (451)
T 3lk7_A 70 -DEDFCYMIKNPGIPY 84 (451)
T ss_dssp -GSCEEEEEECTTSCT
T ss_pred -cCCCCEEEECCcCCC
Confidence 23 899999999743
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=95.91 E-value=0.0098 Score=50.93 Aligned_cols=71 Identities=13% Similarity=0.091 Sum_probs=55.6
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHH-HHHHHHHcCCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKL-IQEVGSKFNGK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~~~~~~ 95 (272)
.+.++|.|. |.+|+.+++.|.++|. |++++++++..+ ..+ ..+.++..|.++++.++++ + .+
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a~i--------~~ 177 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKANV--------RG 177 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHTCS--------TT
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhcCh--------hh
Confidence 457999996 8999999999999999 999999988776 332 2456788999999876644 2 46
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
.|.++.+.+
T Consensus 178 a~~vi~~~~ 186 (336)
T 1lnq_A 178 ARAVIVDLE 186 (336)
T ss_dssp EEEEEECCS
T ss_pred ccEEEEcCC
Confidence 888887664
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.16 Score=43.00 Aligned_cols=113 Identities=15% Similarity=0.127 Sum_probs=67.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCC----CeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.++|.|+|+ |.+|..++..++..|. +|+++++++++++....++.+.. ..+.+.. | +.++
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~~a---------- 71 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DYDD---------- 71 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CGGG----------
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cHHH----------
Confidence 368999999 9999999999998875 89999999876665444443321 1222222 2 1111
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSV 155 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS~ 155 (272)
+ ...|++|.+++........ .. ..+..|.. +.+.+.+.+.+ .+.+.++++|-.
T Consensus 72 -l-~~aDvViia~~~~~~~g~~--r~----dl~~~n~~----i~~~i~~~i~~~~p~a~~iv~tNP 125 (316)
T 1ldn_A 72 -C-RDADLVVICAGANQKPGET--RL----DLVDKNIA----IFRSIVESVMASGFQGLFLVATNP 125 (316)
T ss_dssp -T-TTCSEEEECCSCCCCTTTC--SG----GGHHHHHH----HHHHHHHHHHHHTCCSEEEECSSS
T ss_pred -h-CCCCEEEEcCCCCCCCCCC--HH----HHHHcChH----HHHHHHHHHHHHCCCCEEEEeCCc
Confidence 1 4689999999874322211 11 12334433 33444444444 344667776653
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.23 Score=43.10 Aligned_cols=119 Identities=13% Similarity=0.038 Sum_probs=68.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--E---EEEeeC----ChHHHHHHHHHHHhCCC-eEEEEEecCCCHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA--V---VHTCSR----NEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~--~---v~~~~r----~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~ 85 (272)
+..+|.|+||+|.||.+++..++..+. + +++.+- +++.++...-++++... -..-+..- ++. .
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~-~~~------y 103 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDP------Y 103 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH------H
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEe-cCC------H
Confidence 346799999999999999999998764 2 666433 44445555556654321 11111110 111 1
Q ss_pred HHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc--CCCCeEEEecCCC
Q 024125 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA--SGVGSIVFISSVG 156 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~g~ii~vsS~~ 156 (272)
+ .+ ...|++|..||.... + ..+ -...++.|+.=. +.+.+.+.+ .+.+.|+.+|...
T Consensus 104 ~----~~-~daDvVVitag~prk-p--G~t---R~DLl~~N~~I~----k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 104 E----VF-EDVDWALLIGAKPRG-P--GME---RAALLDINGQIF----ADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp H----HT-TTCSEEEECCCCCCC-T--TCC---HHHHHHHHHHHH----HHHHHHHHHHSCTTCEEEECSSSH
T ss_pred H----Hh-CCCCEEEEcCCCCCC-C--CCC---HHHHHHHHHHHH----HHHHHHHHHhcCCCeEEEEecCch
Confidence 1 12 579999999986321 1 122 234566665444 444444454 3557888887643
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.035 Score=47.17 Aligned_cols=86 Identities=7% Similarity=0.049 Sum_probs=56.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH-------HHh--CCCeEEEEEecCCCHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-------WQS--KGFVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~~ 86 (272)
+.++|.|.|. |.+|..+++.|++.|++|++++|++++.+++.+. +.+ ...++.+ .-+.+...++.++.
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi--~~vp~~~~~~~v~~ 106 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVV--SMLENGAVVQDVLF 106 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEE--ECCSSHHHHHHHHT
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEE--EECCCHHHHHHHHc
Confidence 4568888865 8999999999999999999999999887765432 110 1223333 23445566666665
Q ss_pred --HHHHHcCCCccEEEECCCC
Q 024125 87 --EVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 87 --~~~~~~~~~id~li~~ag~ 105 (272)
.+.+.. .+-.+||++...
T Consensus 107 ~~~~~~~l-~~~~~vi~~st~ 126 (320)
T 4dll_A 107 AQGVAAAM-KPGSLFLDMASI 126 (320)
T ss_dssp TTCHHHHC-CTTCEEEECSCC
T ss_pred chhHHhhC-CCCCEEEecCCC
Confidence 555544 344667776653
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.037 Score=45.22 Aligned_cols=77 Identities=17% Similarity=0.130 Sum_probs=53.5
Q ss_pred EEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 19 TALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
+|.|.|++|.+|+.+++.+.+. +.+|+.+....+.++++.. ...++ ..|.+.++...+.+..+.+. +++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~Dv---vIDfT~p~a~~~~~~~a~~~---g~~ 71 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTEV---VIDFTHPDVVMGNLEFLIDN---GIH 71 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCCE---EEECSCTTTHHHHHHHHHHT---TCE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCcE---EEEccChHHHHHHHHHHHHc---CCC
Confidence 6899999999999999999876 7887654433333333322 12343 46888888887777766553 588
Q ss_pred EEEECCCC
Q 024125 98 ILVNNVGT 105 (272)
Q Consensus 98 ~li~~ag~ 105 (272)
+|+-..|.
T Consensus 72 ~VigTTG~ 79 (245)
T 1p9l_A 72 AVVGTTGF 79 (245)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 88877763
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=95.83 E-value=0.013 Score=48.88 Aligned_cols=40 Identities=23% Similarity=0.268 Sum_probs=35.8
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
..+++||+++|.|++.-+|+-+++.|++.|++|.++.++.
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 193 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT 193 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 3468999999999999999999999999999999987554
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=95.83 E-value=0.064 Score=45.38 Aligned_cols=114 Identities=11% Similarity=0.070 Sum_probs=66.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++|.|.|+ |.+|..++..|++.|. +|.+++|++++.+....++... ......... ++.+. +
T Consensus 8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~----~------- 73 (319)
T 1lld_A 8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI----C------- 73 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG----G-------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHHH----h-------
Confidence 67999998 9999999999999998 9999999987765322222111 001111111 12111 1
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV 155 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~ 155 (272)
...|+||.+++..... ..+. ...+..|..-...+++.+.++ .+...|++++-.
T Consensus 74 -~~aD~Vii~v~~~~~~---g~~r---~~~~~~n~~~~~~~~~~i~~~---~~~~~vi~~~Np 126 (319)
T 1lld_A 74 -RDADMVVITAGPRQKP---GQSR---LELVGATVNILKAIMPNLVKV---APNAIYMLITNP 126 (319)
T ss_dssp -TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSS
T ss_pred -CCCCEEEECCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCceEEEecCc
Confidence 4689999999853221 1122 234555555554555555442 233566666543
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.019 Score=47.79 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=40.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~ 61 (272)
.+++++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+++
T Consensus 118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~ 163 (271)
T 1npy_A 118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 163 (271)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 4688999995 7999999999999997 7999999999988887766
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.015 Score=62.51 Aligned_cols=82 Identities=17% Similarity=0.247 Sum_probs=53.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC-
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG- 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~- 94 (272)
.|.+|||.||+|++|.+.++.....|++|+.+++++++.+.+.+.+...+.... .|.++.+ +.+++.+..++
T Consensus 1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v---~~~~~~~----~~~~i~~~t~g~ 1739 (2512)
T 2vz8_A 1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCF---ANSRDTS----FEQHVLRHTAGK 1739 (2512)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTE---EESSSSH----HHHHHHHTTTSC
T ss_pred CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEE---ecCCCHH----HHHHHHHhcCCC
Confidence 588999999999999999988888899999999988876655543211122211 1333322 22333332222
Q ss_pred CccEEEECCC
Q 024125 95 KLNILVNNVG 104 (272)
Q Consensus 95 ~id~li~~ag 104 (272)
.+|+++++.+
T Consensus 1740 GvDvVld~~g 1749 (2512)
T 2vz8_A 1740 GVDLVLNSLA 1749 (2512)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEECCC
Confidence 5899988764
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.027 Score=47.31 Aligned_cols=84 Identities=6% Similarity=-0.006 Sum_probs=57.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH-------HHhC-CCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-------WQSK-GFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~-------~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++|.|.| .|.+|..+++.|++.|++|++++|++++.+++.+. +.+. ..++ +..-+.+...++++++.+.
T Consensus 16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDv--vi~~vp~~~~~~~v~~~l~ 92 (296)
T 3qha_A 16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADL--IHITVLDDAQVREVVGELA 92 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSE--EEECCSSHHHHHHHHHHHH
T ss_pred CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCE--EEEECCChHHHHHHHHHHH
Confidence 5677777 58999999999999999999999998876665432 1110 1233 3333555677777887776
Q ss_pred HHcCCCccEEEECCCC
Q 024125 90 SKFNGKLNILVNNVGT 105 (272)
Q Consensus 90 ~~~~~~id~li~~ag~ 105 (272)
... .+-.++|++...
T Consensus 93 ~~l-~~g~ivv~~st~ 107 (296)
T 3qha_A 93 GHA-KPGTVIAIHSTI 107 (296)
T ss_dssp TTC-CTTCEEEECSCC
T ss_pred Hhc-CCCCEEEEeCCC
Confidence 654 344677777653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 272 | ||||
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 5e-90 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 7e-89 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 9e-82 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 2e-78 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 5e-76 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 2e-75 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 1e-73 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 2e-73 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 2e-72 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 9e-72 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 9e-72 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 1e-70 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-70 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 4e-70 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 9e-69 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 1e-68 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 9e-68 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 2e-67 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 2e-67 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 2e-67 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 8e-67 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 2e-66 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 2e-65 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 2e-65 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 4e-65 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 8e-65 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 1e-64 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 7e-64 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 3e-63 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 2e-62 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 2e-62 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 2e-62 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 3e-62 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 4e-62 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 6e-62 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 8e-62 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 8e-61 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 6e-60 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 7e-60 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 1e-58 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 3e-58 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 3e-58 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 4e-57 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 8e-57 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 1e-56 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 5e-56 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 4e-53 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 9e-52 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 2e-51 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 2e-50 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 3e-50 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 1e-48 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 1e-48 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 2e-44 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 1e-42 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 4e-42 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 7e-42 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 9e-42 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 2e-39 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 5e-38 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 2e-37 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 3e-36 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 5e-33 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 6e-33 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 3e-24 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 7e-17 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 3e-16 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 1e-12 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 1e-06 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-05 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 4e-05 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 6e-05 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-05 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-04 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 3e-04 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-04 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 5e-04 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 6e-04 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 0.001 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 0.003 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 0.003 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 0.004 |
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 265 bits (678), Expect = 5e-90
Identities = 160/255 (62%), Positives = 194/255 (76%), Gaps = 1/255 (0%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
S RWSLK T LVTGGT+GIG A VEE AG GAV+HTC+RNE ELN+CL +WQ KGF V+
Sbjct: 1 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVT 60
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
GSVCDA+ +REKL+Q V S F GKL+IL+NN+G KPT++Y+AE++S ++TN ES
Sbjct: 61 GSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLES 120
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
YHL QL +PLLKASG G+I+F+SS+ G+ GSIY ATK A+NQL RNLACEWA D
Sbjct: 121 AYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDG 180
Query: 190 IRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
IR N+VAP T L E + ++ EF VI+R PL R GEPEEV+SLVA+LC+PAASYIT
Sbjct: 181 IRANAVAPAVIATPLAEAVYDD-EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYIT 239
Query: 250 GQIISVDGGFTANGF 264
GQ I VDGG T NGF
Sbjct: 240 GQTICVDGGLTVNGF 254
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 262 bits (671), Expect = 7e-89
Identities = 152/259 (58%), Positives = 190/259 (73%), Gaps = 4/259 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ RW+L+G TALVTGG+RGIG VEELA LGA V+TCSRN+ ELN CL +W+SKGF V
Sbjct: 1 AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 60
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
SVCD +S +R++L+ V + F+GKLNILVNN G I K +Y+ E+YS IM+ NFE+
Sbjct: 61 ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEA 120
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
YHL L +P LKAS G++VFISSV G V ++YGATK AM+QLTR LA EWAKDN
Sbjct: 121 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 180
Query: 190 IRTNSVAPWYTKTSLVERLL---ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
IR N V P TSLVE + E KE ++K+I R L+R+GEP+E+A++VA+LC PAAS
Sbjct: 181 IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAAS 240
Query: 247 YITGQIISVDGGFTAN-GF 264
Y+TGQII VDGG AN GF
Sbjct: 241 YVTGQIIYVDGGLMANCGF 259
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 244 bits (624), Expect = 9e-82
Identities = 152/256 (59%), Positives = 193/256 (75%), Gaps = 4/256 (1%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSLKG TALVTGG++GIG A VEELAGLGA V+TCSRNE EL++CL+ W+ KG V GS
Sbjct: 1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 60
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCD S +R+KL+Q V F+GKLNILVNN G I K +++ ++Y+ IM TNFE+ Y
Sbjct: 61 VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ YPLLKAS G+++F+SS+ G S + S S+Y A+K A+NQ+T++LACEWAKDNIR
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 180
Query: 192 TNSVAPWYTKTSLVERLL----ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
NSVAP T LVE + KE +D I +TP+ R G+P+EV++L+A+LC PAASY
Sbjct: 181 VNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 240
Query: 248 ITGQIISVDGGFTANG 263
ITGQII DGGFTANG
Sbjct: 241 ITGQIIWADGGFTANG 256
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 235 bits (601), Expect = 2e-78
Identities = 78/252 (30%), Positives = 118/252 (46%), Gaps = 11/252 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G LVTGG RGIG+A + A GA+V C E + + F D
Sbjct: 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP-EGKEVAEAIGGAFFQ-----VD 56
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+R + ++E G++++LVNN + E+ +++ N + HL
Sbjct: 57 LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
L ++ G G+IV ++SV GL + Y A+K + LTR+LA + A IR N+
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 175
Query: 195 VAPWYTKTSLVERLL----ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
VAP T V + + + L+R+G+PEEVA V +L AS+ITG
Sbjct: 176 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 235
Query: 251 QIISVDGGFTAN 262
I+ VDGG TA+
Sbjct: 236 AILPVDGGMTAS 247
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 229 bits (585), Expect = 5e-76
Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 3/247 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK A++TGG GIG+A E A GA + + ++ G V CD
Sbjct: 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE--AAIRNLGRRVLTVKCD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ P E ++V S F G+ +ILVNN G P E + E++ K N +S + +
Sbjct: 61 VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P +K +G G I+ ++S + + + Y +TKAA TR LA + KD I N+
Sbjct: 120 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 179
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
+AP +T+ E + F + R+ P ++ A+L AS+ITGQ ++
Sbjct: 180 IAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLA 239
Query: 255 VDGGFTA 261
VDGG
Sbjct: 240 VDGGMVR 246
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 227 bits (580), Expect = 2e-75
Identities = 75/250 (30%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ G+ ALVTG +GIG+ TV+ L GA V +R +L KE V
Sbjct: 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVC----V 57
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D D EK + +G +++LVNN I +P +E + E + + + N S + +
Sbjct: 58 DLGDWDATEKALGGIG-----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 112
Query: 134 CQLVYPLL-KASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q+V + GSIV +SS+ + Y +TK AM LT+ +A E IR
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
NSV P T + +++ + EF K+ R PL++ E E+V + + +L ++ +G
Sbjct: 173 NSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGG 232
Query: 253 ISVDGGFTAN 262
I VD G+ A+
Sbjct: 233 ILVDAGYLAS 242
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 223 bits (570), Expect = 1e-73
Identities = 90/252 (35%), Positives = 141/252 (55%), Gaps = 3/252 (1%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGS 71
+ L+G ALVTGG+RG+G + LA G V SRN E ++ ++ K G
Sbjct: 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 60
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
CD ++ ++ +KL++ V KF GKL+ +VN G N R P E+ +E+ +++ N TY
Sbjct: 61 RCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 119
Query: 132 HLCQLVYPLLKASGVGSIVFIS-SVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
++C+ + LL+ S SI+ I + + S Y A+K + LT+ LA EW + I
Sbjct: 120 YVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 179
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
R N +AP + +T + E + + E +D ++ R PL R G PE++ + +L A Y+TG
Sbjct: 180 RVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTG 239
Query: 251 QIISVDGGFTAN 262
QII VDGG+TAN
Sbjct: 240 QIIFVDGGWTAN 251
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 222 bits (567), Expect = 2e-73
Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 10/249 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G LVTG +GIG+ TV+ L GA V SR + +L+ ++E V
Sbjct: 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVC----V 59
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + E+ + VG +++LVNN + +P +E + E + + N + +
Sbjct: 60 DLGDWEATERALGSVG-----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 134 CQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q+V L A GV +IV +SS V + S+Y +TK A++ LT+ +A E IR
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N+V P TS+ + + ++ R PL + E E V + + +L + TG
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGST 234
Query: 253 ISVDGGFTA 261
+ V+GGF A
Sbjct: 235 LPVEGGFWA 243
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 220 bits (562), Expect = 2e-72
Identities = 76/249 (30%), Positives = 112/249 (44%), Gaps = 7/249 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G T ++TGG RG+G + GA V + E +E D
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQ---HLD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ ++++ +F G ++ LVNN G + S E + K++ N +
Sbjct: 60 VTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V P +K +G GSIV ISS GL + S YGA+K + L++ A E D IR NS
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVG-EPEEVASLVAYLCLPAASYITGQII 253
V P T T + + TP+ RVG EP E+A V L +SY+TG +
Sbjct: 179 VHPGMTYTPMTAET--GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAEL 236
Query: 254 SVDGGFTAN 262
+VDGG+T
Sbjct: 237 AVDGGWTTG 245
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 219 bits (558), Expect = 9e-72
Identities = 76/254 (29%), Positives = 113/254 (44%), Gaps = 10/254 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G ALVTGG G+G V+ L G GA V NE + E + V D
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV---RHD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+S ++ V + G LN+LVNN G + E++S+++ N ES + C
Sbjct: 61 VSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD--NIRT 192
Q +K +G GSI+ ++SV + + Y A+KAA++ LTR A K IR
Sbjct: 120 QQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178
Query: 193 NSVAPWYTKTSLVERLLEN---KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
NS+ P T +++ L KE V R PE +A LV +L +S ++
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238
Query: 250 GQIISVDGGFTANG 263
G + D G
Sbjct: 239 GSELHADNSILGMG 252
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 219 bits (559), Expect = 9e-72
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 16/261 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGS 71
A++TG + GIG+AT A GA V R+ L + ++ + G V+
Sbjct: 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNF 127
V D + +++++ KF GKL+ILVNN G I K S E Y + N
Sbjct: 63 VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S L + P L ++ + S GL Y KAA++Q TRN A + +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDK-------VIARTPLQRVGEPEEVASLVAYL 240
IR NS++P T + +E K + P +G+P+++A ++A+L
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 241
Query: 241 C-LPAASYITGQIISVDGGFT 260
+SYI G + VDGG +
Sbjct: 242 ADRKTSSYIIGHQLVVDGGSS 262
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 216 bits (550), Expect = 1e-70
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 6/250 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A++TGGT GIG A + GA V R+ K K + + D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
++ D KL F G ++ LVNN G + K E + E+ K++ N + +
Sbjct: 63 SSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 135 QLVYPLLKASGVGSI-VFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--KDNIR 191
+L +K G+G+ + +SS+ G S Y A+K A+ ++++ A + A ++R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
N+V P Y KT LV+ L E +TP+ +GEP ++A + YL + + TG
Sbjct: 182 VNTVHPGYIKTPLVDDLPG-AEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGS 240
Query: 252 IISVDGGFTA 261
VDGG+TA
Sbjct: 241 EFVVDGGYTA 250
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 214 bits (547), Expect = 2e-70
Identities = 75/247 (30%), Positives = 121/247 (48%), Gaps = 9/247 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK L+TG GIG+AT+E A GA + C E L + + + V D
Sbjct: 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV-----MD 57
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A P E+ E + G+L+ +V+ G + E++ ++ N ++ +
Sbjct: 58 VADPASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA 116
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ ++ GSIV +S L ++G + Y A+ A + LTR LA E + IR N+
Sbjct: 117 KAASEAMREKNPGSIVLTASRVYLGNLGQ-ANYAASMAGVVGLTRTLALELGRWGIRVNT 175
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
+AP + +T + ++ E + +K IA TPL R G+P EVA +L +S+ITGQ++
Sbjct: 176 LAPGFIETRMTAKVPE--KVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLF 233
Query: 255 VDGGFTA 261
VDGG T
Sbjct: 234 VDGGRTI 240
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 214 bits (546), Expect = 4e-70
Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 12/251 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G +VTGG RGIG V GA V C ++E +E F++ CD
Sbjct: 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL----CD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFESTYHL 133
D + L+ E +F +L+ +VNN G + E SA+ + +++ N TY L
Sbjct: 60 VTQEDDVKTLVSETIRRFG-RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+L P L+ S G+++ ISS+ G Y ATK A+ +T+ LA + + +R N
Sbjct: 119 TKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 177
Query: 194 SVAPWYTKTSLVERLL----ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
++P T L E L + + + + + PL R+G+P EV + +L A++ T
Sbjct: 178 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCT 236
Query: 250 GQIISVDGGFT 260
G + V GG
Sbjct: 237 GIELLVTGGAE 247
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 211 bits (537), Expect = 9e-69
Identities = 70/248 (28%), Positives = 130/248 (52%), Gaps = 3/248 (1%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+ + ALVTG RGIG+ + LA + V SR + + + E +S G+ SG
Sbjct: 6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + ++ ++I ++ ++ ++ILVNN G + +E+ ++ TN S ++
Sbjct: 66 GDVSKKEEISEVINKILTEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFY 124
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ Q + + + G I+ ISS+ GL+ + Y ++KA + T++LA E A NI
Sbjct: 125 ITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 184
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N++AP + + + +++ E + +I+ P R+G PEEVA+L +L + YI G++
Sbjct: 185 NAIAPGFISSDMTDKISE--QIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRV 242
Query: 253 ISVDGGFT 260
+DGG +
Sbjct: 243 FVIDGGLS 250
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 210 bits (537), Expect = 1e-68
Identities = 61/252 (24%), Positives = 102/252 (40%), Gaps = 11/252 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF--VVSGSV 72
+ ALVTG + GIG A L G V C+R + + E +S G+ +
Sbjct: 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD ++ + + + S+ ++I +NN G + S + + N +
Sbjct: 68 CDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSI 126
Query: 133 LCQLVYPLLKASGV--GSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEW--A 186
+ Y +K V G I+ I+S+ G + Y ATK A+ LT L E A
Sbjct: 127 CTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA 186
Query: 187 KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246
+ +IR ++P +T +L + + +K A + +PE+VA V Y+ A
Sbjct: 187 QTHIRATCISPGVVETQFAFKLHD--KDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAH 244
Query: 247 YITGQIISVDGG 258
G I G
Sbjct: 245 IQIGDIQMRPTG 256
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 209 bits (533), Expect = 9e-68
Identities = 72/262 (27%), Positives = 114/262 (43%), Gaps = 16/262 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGS 71
T ++TG + GIG+ T A GA V R+ L + + G V+
Sbjct: 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKP----TIEYSAEEYSKIMTTNF 127
V D + D ++++I +F GK+++LVNN G I + + Y K + N
Sbjct: 63 VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
++ + + V P L AS + S V G Y KAA++Q TR+ A + AK
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181
Query: 188 DNIRTNSVAPWYTKTSLVERLL-------ENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
IR NSV+P +T + + F+ P+ G+PE +A+++ +L
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241
Query: 241 CLPAAS-YITGQIISVDGGFTA 261
S YI GQ I DGG +
Sbjct: 242 ADRNLSFYILGQSIVADGGTSL 263
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 208 bits (530), Expect = 2e-67
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 12/256 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
S T +VTGG RGIG A +A GA V R+ + + ++ + G
Sbjct: 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD ++ D K IQ++ + G ++ L+ N G ++ KP E + E+++ + N ++
Sbjct: 66 CDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124
Query: 133 LCQLVYPLLKASGVGSIVFISS--------VGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
C+ V L + ++S L+ + Y ++KAA + L + LA E
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184
Query: 185 WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
WA IR N+++P Y T + +K+ D + PL R +PEE+ L
Sbjct: 185 WASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDH 242
Query: 245 ASYITGQIISVDGGFT 260
A+Y+TG +DGG
Sbjct: 243 ATYMTGGEYFIDGGQL 258
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 209 bits (533), Expect = 2e-67
Identities = 87/261 (33%), Positives = 128/261 (49%), Gaps = 9/261 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-----SKGFVVS 69
L+G A+VTGG GIG+A V+EL LG+ V SR L E Q +K V
Sbjct: 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
C+ + ++ L++ F GK+N LVNN G P S++ + ++ TN
Sbjct: 70 PIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 128
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
T+++C+ VY GSIV I + GA +A + LT++LA EWA
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLA-VHSGAARAGVYNLTKSLALEWACSG 187
Query: 190 IRTNSVAPWYTKTSLVERLL--ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
IR N VAP + + F + + P +R+G PEEV+S+V +L PAAS+
Sbjct: 188 IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF 247
Query: 248 ITGQIISVDGGFTANGFNPGI 268
ITGQ + VDGG + + +
Sbjct: 248 ITGQSVDVDGGRSLYTHSYEV 268
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 208 bits (530), Expect = 2e-67
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 14/260 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGS 71
G + ++TG + GIG++ A GA V RNE L + ++ G ++
Sbjct: 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFES 129
V D ++ +I +KF GK++ILVNN G N+ T + E Y K NF++
Sbjct: 62 VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ Q L + + S V G Y KAA++Q TR A + +
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180
Query: 190 IRTNSVAPWYTKTSLVERLLEN-------KEFVDKVIARTPLQRVGEPEEVASLVAYLC- 241
+R NSV+P T + + F+ P+ G+PEE+A+++ +L
Sbjct: 181 VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 240
Query: 242 LPAASYITGQIISVDGGFTA 261
+SYI GQ I DGG T
Sbjct: 241 RNLSSYIIGQSIVADGGSTL 260
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 206 bits (525), Expect = 8e-67
Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 12/256 (4%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
ALVTG T GIG L G V C+R E L LKE + G G CD
Sbjct: 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
S + E L+ V ++ G +++LVNN G T E + E + ++ TN + + +
Sbjct: 62 SVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 120
Query: 137 VYPL--LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
V + G G IV I+S GG V + Y A+K + T+ L E A+ I N+
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180
Query: 195 VAPWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
V P + +T + + E+ +E D++ AR P+ R +P EVA +VAYL P A
Sbjct: 181 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 240
Query: 246 SYITGQIISVDGGFTA 261
+ +T Q ++V GG
Sbjct: 241 AAVTAQALNVCGGLGN 256
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 205 bits (523), Expect = 2e-66
Identities = 83/254 (32%), Positives = 131/254 (51%), Gaps = 3/254 (1%)
Query: 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV 67
F S L G A++TG GIG+ A GA V N N + E Q G
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
CD S + L SK GK++ILVNN G KP + ++ + N
Sbjct: 62 AFACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNV 119
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S +HL QLV P ++ +G G I+ I+S+ + + + Y ++KAA + L RN+A + +
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
NIR N +AP T ++ ++ E K++ TP++R+G+P+++A+ +LC PAAS+
Sbjct: 180 KNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW 238
Query: 248 ITGQIISVDGGFTA 261
++GQI++V GG
Sbjct: 239 VSGQILTVSGGGVQ 252
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 202 bits (515), Expect = 2e-65
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 15/251 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ++T +GIGQA A GA V NE +L + K + V
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV------- 56
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D +K + + +L++L N G ++ +++ M N S Y +
Sbjct: 57 ---LDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113
Query: 135 QLVYPLLKASGVGSIVFISSV-GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P + A G+I+ +SSV + V + +Y TKAA+ LT+++A ++ + IR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173
Query: 194 SVAPWYTKTSLVERLLENKE----FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249
V P T ++ ++ + + + R R EE+A L YL ++Y+T
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233
Query: 250 GQIISVDGGFT 260
G + +DGG++
Sbjct: 234 GNPVIIDGGWS 244
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 203 bits (517), Expect = 2e-65
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 14/259 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSV 72
SL+G ALVTG RGIG+ EL G V N E + + + G +
Sbjct: 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 74
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
+ + ++ +E F GKL+I+ +N G + + EE+ ++ T N +
Sbjct: 75 ANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 133
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ + Y L+ G ++ + G V ++Y +K A+ R +A + A I
Sbjct: 134 VAREAYKHLEIGGRLILMGSIT-GQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITV 192
Query: 193 NSVAPWYTKTSLVERLLENKEFVDK-----------VIARTPLQRVGEPEEVASLVAYLC 241
N VAP KT + + + + +PL+RVG P ++A +V +L
Sbjct: 193 NVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA 252
Query: 242 LPAASYITGQIISVDGGFT 260
++TG++I +DGG
Sbjct: 253 SNDGGWVTGKVIGIDGGAC 271
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 201 bits (513), Expect = 4e-65
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 14/256 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
TA+VT G + L+ G V + + ++ + F + S
Sbjct: 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSE 55
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
+ +LI+ V S + G++++LV+N +P +Y+ E+Y + + L V
Sbjct: 56 QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+K G I+FI+S S Y + +A L L+ E + NI ++ P
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 174
Query: 198 WYTKTSLVERLLE------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
Y + N E V V T LQR+G +E+ LVA+L + Y+TGQ
Sbjct: 175 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 234
Query: 252 IISVDGGFTANGFNPG 267
+ + GGF PG
Sbjct: 235 VFWLAGGFPMIERWPG 250
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 201 bits (513), Expect = 8e-65
Identities = 68/267 (25%), Positives = 109/267 (40%), Gaps = 20/267 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LKG L+TGG G+G+A V+ GA V ++ L + + G V G V D
Sbjct: 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVGD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY-----SAEEYSKIMTTNFES 129
S + +++ ++F GK++ L+ N G + + ++ N +
Sbjct: 60 VRSLEDQKQAASRCVARF-GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
H + P L AS G+++F S G G G +Y A K A+ L R LA E A
Sbjct: 119 YIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PY 176
Query: 190 IRTNSVAPWYTKTSLV--------ERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241
+R N V + L + + D + + P+ R+ E EE +
Sbjct: 177 VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFA 236
Query: 242 LPA-ASYITGQIISVDGGFTANGFNPG 267
A+ TG +++ DGG GF G
Sbjct: 237 TRGDAAPATGALLNYDGGLGVRGFFSG 263
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 201 bits (512), Expect = 1e-64
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 8/255 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+ A++TGG GIG+ T + GA V + K S V+S CD
Sbjct: 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTYH 132
+ L+ +K GKL+I+ NVG P +E E++ ++M N +
Sbjct: 63 VTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ + ++ + GSIVF +S+ + G +Y ATK A+ LT +L E + IR
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIAR---TPLQRVGEPEEVASLVAYLCLPAASYI 248
N V+P+ + L+ + + +A + E+VA VAYL + Y+
Sbjct: 182 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 241
Query: 249 TGQIISVDGGFTANG 263
+G + +DGG+T
Sbjct: 242 SGLNLVIDGGYTRTN 256
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 198 bits (505), Expect = 7e-64
Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 4/256 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVC 73
L+G ++TG + G+G++ A A V R+ E E N L+E + G
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D L+Q +F GKL++++NN G + E S +++K++ TN +
Sbjct: 65 DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 134 CQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ G+++ +SSV Y A+K M +T LA E+A IR
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
N++ P T + + E V + P+ +GEPEE+A++ A+L ASY+TG
Sbjct: 184 NNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGIT 243
Query: 253 ISVDGGFTAN-GFNPG 267
+ DGG T F G
Sbjct: 244 LFADGGMTLYPSFQAG 259
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 196 bits (500), Expect = 3e-63
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 11/247 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ALV+GG RG+G + V + GA V + E E V D
Sbjct: 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
P Q + + + F G L++LVNN G +Y+ E+ +I+ N +
Sbjct: 61 VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V +K +G GSI+ ISS+ GL+ + Y ATK A+ LT++ A E IR NS
Sbjct: 120 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 179
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
+ P KT + + + E+ I +T L R EP EV++LV YL +SY TG
Sbjct: 180 IHPGLVKTPMTDWVPED-------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV 232
Query: 255 VDGGFTA 261
VDGG A
Sbjct: 233 VDGGTVA 239
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 195 bits (496), Expect = 2e-62
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G AL TG RGIG+ EL GA VV + + + E + G
Sbjct: 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + P + L + S F G L+ +++N G + +E + E + K+ N + +
Sbjct: 64 DISKPSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q + G I+ S ++ + + ++Y +KAA+ R A + + N
Sbjct: 123 AQQGLKHCRRGGRI-ILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVN 181
Query: 194 SVAPWYTKTSLVERL-----------LENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
+AP KT + + + ++ + + PL+R+G P ++ V+ LC
Sbjct: 182 CIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQ 241
Query: 243 PAASYITGQIISVDGG 258
+ +I GQ+I + GG
Sbjct: 242 EESEWINGQVIKLTGG 257
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 196 bits (499), Expect = 2e-62
Identities = 73/250 (29%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
S +G A +TGG G+G+ L+ LGA SR L ++ S+ G V
Sbjct: 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY- 131
CD PD + + E+ G NI++NN N PT S + I T
Sbjct: 82 CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 140
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
++ L+KA + + I+++ + G + KA + ++++LA EW K +R
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 200
Query: 192 TNSVAPWYTKTSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
N + P KT L+ F ++I R P R+G EE+A+L A+LC AS+I G
Sbjct: 201 FNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWING 260
Query: 251 QIISVDGGFT 260
+I DGG
Sbjct: 261 AVIKFDGGEE 270
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 194 bits (495), Expect = 2e-62
Identities = 72/246 (29%), Positives = 114/246 (46%), Gaps = 9/246 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G T LVTG GIG+A ++ A GA + R E L + + +++ V V D
Sbjct: 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VAD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ P E + E +F G+L+ + + G + E + K++ N ++ +
Sbjct: 60 VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 118
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ +L+ GS+V SV GL G Y A K + L R LA E A+ +R N
Sbjct: 119 RKAGEVLE--EGGSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNV 175
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
+ P +T + L ++ + +PL R G PEEVA +L ++YITGQ +
Sbjct: 176 LLPGLIQTPMTAGLPP--WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALY 233
Query: 255 VDGGFT 260
VDGG +
Sbjct: 234 VDGGRS 239
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 194 bits (494), Expect = 3e-62
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 14/258 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G LVTG IG AT LA G + N L K + KG VCD
Sbjct: 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
S + + V F + N P +Y ++++++++T N +H+
Sbjct: 63 VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V + G IV +S+ G+ + + YG +K A+ LT A + A NIR N+
Sbjct: 123 KAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNA 182
Query: 195 VAPWYTKTSLVERLL--------------ENKEFVDKVIARTPLQRVGEPEEVASLVAYL 240
++P Y + + K ++I P++R G+ E+ +VA+L
Sbjct: 183 ISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFL 242
Query: 241 CLPAASYITGQIISVDGG 258
+S++TG + + GG
Sbjct: 243 LGDDSSFMTGVNLPIAGG 260
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 195 bits (498), Expect = 4e-62
Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 26/256 (10%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKCLKEWQSKG 65
G LVTG G+G+A A GA+V + +K ++E + +G
Sbjct: 5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT 125
+ + EKL++ F G+++++VNN G + S E++ I
Sbjct: 65 GKAVANYDS---VEAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRV 120
Query: 126 NFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
+ ++ + + + +K G I+ +S G+ + Y A K + L L E
Sbjct: 121 HLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEG 180
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
K+NI N++AP + E L +PE VA LV +LC +
Sbjct: 181 RKNNIHCNTIAPNAGSRMTETVMPE------------DLVEALKPEYVAPLVLWLCHESC 228
Query: 246 SYITGQIISVDGGFTA 261
G + V G+
Sbjct: 229 -EENGGLFEVGAGWIG 243
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 194 bits (493), Expect = 6e-62
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 13/259 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW--QSKGFVVSGSV 72
LKG A+VTG T GIG LA GA + + + ++ G V
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + L+ + G+++ILVNN G ++ E++ I+ N + +H
Sbjct: 62 ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
P +K G G I+ I+S GL + S Y A K + T+ A E A I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 193 NSVAPWYTKTSLVERLL----------ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
N++ P + +T LVE+ + + + + + P + PE++ +L
Sbjct: 181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240
Query: 243 PAASYITGQIISVDGGFTA 261
AA+ ITG +SVDGG+TA
Sbjct: 241 DAAAQITGTTVSVDGGWTA 259
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 193 bits (492), Expect = 8e-62
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 10/256 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF--VVSGSV 72
L+TGG G+G+AT LA GA + + L V +V
Sbjct: 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + Q E + +F G+++ NN G + PT ++A E+ K+++ N +
Sbjct: 62 ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ V +++ G G +V +SVGG+ +G+ S Y A K + LTRN A E+ + IR
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180
Query: 192 TNSVAPWYTKTSLVERLLEN------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245
N++AP T +VE ++ ++ ++ I P +R GE E+A++VA+L A
Sbjct: 181 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240
Query: 246 SYITGQIISVDGGFTA 261
SY+ ++ +DGG +A
Sbjct: 241 SYVNATVVPIDGGQSA 256
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 190 bits (483), Expect = 8e-61
Identities = 75/247 (30%), Positives = 124/247 (50%), Gaps = 17/247 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
++ LV +RGIG+A + L+ GA V C+RNE L + + VCD
Sbjct: 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 52
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
K + + K +++ILV N G E + E++ + + + F + +
Sbjct: 53 L------RKDLDLLFEKV-KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 105
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P +K G G IV I+S +S + + + + A+ + L+ E A I N
Sbjct: 106 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 165
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
VAP +T+T V+ LL + +V ++ P++R+ +PEE+AS+VA+LC ASY+TGQ I
Sbjct: 166 VAPGWTETERVKELLSEE-KKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIV 224
Query: 255 VDGGFTA 261
VDGG +
Sbjct: 225 VDGGLSK 231
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 188 bits (478), Expect = 6e-60
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 5/243 (2%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+VTG +RGIG+A L G V+ +R+ + K+ ++ G D +
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
E +++ + G ++++VNN G I ++ +++ N + Q
Sbjct: 64 ADVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
++ G I+ I+SV GL + Y A KA + ++ A E A NI N V P
Sbjct: 123 KIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPG 182
Query: 199 YTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL-PAASYITGQIISVDG 257
+ + + +L E + K++ PL R G+PE VA LV +L L PAASYITGQ ++DG
Sbjct: 183 FIASDMTAKLGE--DMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG 240
Query: 258 GFT 260
G
Sbjct: 241 GIA 243
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 188 bits (477), Expect = 7e-60
Identities = 77/246 (31%), Positives = 121/246 (49%), Gaps = 6/246 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+G ALVTG +RGIG+A E LA GA V + +E + G + +V D
Sbjct: 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
AS + + I+ G+++ILVNN G + EE++ I+ TN S + L
Sbjct: 62 PASIESVLEKIR----AEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V + G I+ I SV G G + Y A KA + +++LA E A I N
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 177
Query: 195 VAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254
VAP + +T + + + ++A+ P R+G +E+A+ VA+L A+YITG+ +
Sbjct: 178 VAPGFIETDMTRA--LSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLH 235
Query: 255 VDGGFT 260
V+GG
Sbjct: 236 VNGGMY 241
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 184 bits (469), Expect = 1e-58
Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 14/248 (5%)
Query: 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSG 70
++ + LVTGG RGIG A + LA G V R G
Sbjct: 1 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----------G 49
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D D ++ V + +LV+N G + + + E++ K++ N
Sbjct: 50 VEVDVTDSDAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGA 108
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ + Q ++ + G ++FI SV GL +G+ + Y A+KA + + R++A E +K N+
Sbjct: 109 FRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANV 168
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
N VAP Y T + L E + + P +RVG P EVA +V++L ASYI+G
Sbjct: 169 TANVVAPGYIDTDMTRALDERIQ--QGALQFIPAKRVGTPAEVAGVVSFLASEDASYISG 226
Query: 251 QIISVDGG 258
+I VDGG
Sbjct: 227 AVIPVDGG 234
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (468), Expect = 3e-58
Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 24/258 (9%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVC 73
G ALVTG +GIG+A E L GA V N +C + C
Sbjct: 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A Q ++V F G+L+ILVNN G N K + K + N S
Sbjct: 62 DVADQQQLRDTFRKVVDHF-GRLDILVNNAGVNNEKN--------WEKTLQINLVSVISG 112
Query: 134 CQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN--LACEWAKD 188
L + G I+ +SS+ GL V +Y A+K + TR+ LA
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS 172
Query: 189 NIRTNSVAPWYTKTSLVERLLENK------EFVDKVIARTPLQRVGEPEEVASLVAYLCL 242
+R N++ P + T+++E + + + E+ D + + +P +A+ + L
Sbjct: 173 GVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE 232
Query: 243 PAASYITGQIISVDGGFT 260
A + G I+ +
Sbjct: 233 DDA--LNGAIMKITTSKG 248
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 184 bits (467), Expect = 3e-58
Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 10/255 (3%)
Query: 15 LKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L G ALV G T R +G A +L GA V + E L ++
Sbjct: 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKLAEALGGALLFR 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKP----TIEYSAEEYSKIMTTNFE 128
D ++ + L V + G L+ LV+ + R+ I+ +++ + +
Sbjct: 65 ADVTQDEELDALFAGV-KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
S + + PLL+ G IV ++ V ++ KAA+ R LA E
Sbjct: 124 SLVAVARRAEPLLREGGG--IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPK 181
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
+R N+++ +T + + D+V PL+R EEV +L +L P AS I
Sbjct: 182 GVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGI 241
Query: 249 TGQIISVDGGFTANG 263
TG+++ VD G+ G
Sbjct: 242 TGEVVYVDAGYHIMG 256
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 181 bits (460), Expect = 4e-57
Identities = 65/254 (25%), Positives = 97/254 (38%), Gaps = 11/254 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG +GIG+A L G V N+ E G D +
Sbjct: 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
DQ +++ G +++VNN G P + E K+ N + Q
Sbjct: 63 DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121
Query: 139 PL-LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
K G I+ S G ++Y ++K A+ LT+ A + A I N P
Sbjct: 122 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 181
Query: 198 WYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
KT + + + R L R+ EPE+VA+ V+YL P + Y+
Sbjct: 182 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 241
Query: 249 TGQIISVDGGFTAN 262
TGQ + +DGG N
Sbjct: 242 TGQSLLIDGGMVFN 255
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (457), Expect = 8e-57
Identities = 54/240 (22%), Positives = 92/240 (38%), Gaps = 16/240 (6%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
R S+ G L+TG GIG+ T E A L + + N+ L + + + G V
Sbjct: 2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 61
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
V D ++ + ++V ++ G ++ILVNN G + K N + +
Sbjct: 62 VVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 120
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK---D 188
+ P + + G IV ++S G V Y ++K A + L E A
Sbjct: 121 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
++T + P + T ++ T L EPEEV + + + L I
Sbjct: 181 GVKTTCLCPNFVNTGFIKN------------PSTSLGPTLEPEEVVNRLMHGILTEQKMI 228
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 179 bits (456), Expect = 1e-56
Identities = 46/253 (18%), Positives = 79/253 (31%), Gaps = 17/253 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC--LKEWQSKGFVVSGS 71
L + GIG T EL LK K + +
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
+ +KL++++ + ++IL+N G + + + NF
Sbjct: 62 YDVTVPVAESKKLLKKIFDQL-KTVDILINGAGI--------LDDHQIERTIAINFTGLV 112
Query: 132 HLCQLVYPLLKAS---GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ + G I I SV G + + +Y A+KAA+ T +LA
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172
Query: 189 NIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248
+ S+ P T+T LV + V+ +A L + E +
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLD-VEPRVAELLLSHPTQTSEQCG--QNFVKAIEANK 229
Query: 249 TGQIISVDGGFTA 261
G I +D G
Sbjct: 230 NGAIWKLDLGTLE 242
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 178 bits (453), Expect = 5e-56
Identities = 67/254 (26%), Positives = 103/254 (40%), Gaps = 14/254 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G TAL+TG RGIG+A E GA V N E + D
Sbjct: 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAI---ALD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
++ + E+ ++ G ++ILVNN P +E + E Y ++ N T +
Sbjct: 60 VTDQASIDRCVAELLDRW-GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMM 118
Query: 135 QLVYPLL-KASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q V + G I+ ++S G +Y ATKAA+ LT++ + I N
Sbjct: 119 QAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 178
Query: 194 SVAPWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244
++AP + + E +V A P R+G E++ + +L P
Sbjct: 179 AIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE 238
Query: 245 ASYITGQIISVDGG 258
A YI Q +VDGG
Sbjct: 239 ADYIVAQTYNVDGG 252
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 170 bits (432), Expect = 4e-53
Identities = 57/248 (22%), Positives = 98/248 (39%), Gaps = 21/248 (8%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L+TG +GIG+A E A V+ SR +L K E +++G +
Sbjct: 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + +L + ++ G ++ LVNN G + + E++ M TN + T+
Sbjct: 64 ADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L Q ++ L++ G I FI+SV SIY +K L + K N+R
Sbjct: 123 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 182
Query: 193 NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252
V P T + ++ + + PE++A+ V L + + +I
Sbjct: 183 TDVQPGAVYTPMWGKVDDE-----------MQALMMMPEDIAAPVVQAYLQPSRTVVEEI 231
Query: 253 I--SVDGG 258
I G
Sbjct: 232 ILRPTSGD 239
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 167 bits (423), Expect = 9e-52
Identities = 54/251 (21%), Positives = 94/251 (37%), Gaps = 25/251 (9%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+ALVTGG G+G+A L G V +G + D
Sbjct: 3 SALVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTRE 50
Query: 79 DQREKLIQEVGSKFNGK--LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+ + + + ++ + I + E + +++ N T+++ +L
Sbjct: 51 EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110
Query: 137 VYPL------LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
G IV +SV + Y A+K + LT A E A I
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLVAYLCLPAASYIT 249
R +VAP T L++ L E + + A+ P R+G PEE A+LV ++ +
Sbjct: 171 RVVTVAPGLFDTPLLQGLPE--KAKASLAAQVPFPPRLGRPEEYAALVLHIL--ENPMLN 226
Query: 250 GQIISVDGGFT 260
G+++ +DG
Sbjct: 227 GEVVRLDGALR 237
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 167 bits (422), Expect = 2e-51
Identities = 50/258 (19%), Positives = 110/258 (42%), Gaps = 11/258 (4%)
Query: 15 LKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L G LVTG I + + GA + +N+ +L ++E+ ++
Sbjct: 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQ 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKP-----TIEYSAEEYSKIMTTNF 127
CD A + + E+G + K + V+++G + E + +
Sbjct: 62 CDVAEDASIDTMFAELGKVWP-KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S + + +L +++ +S +G + + ++ G KA++ R +A
Sbjct: 121 YSFVAMAKACRSMLNPGS--ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGP 178
Query: 188 DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247
+ +R N+++ +T + + ++ + A TP++R E+V + A+LC ++
Sbjct: 179 EGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG 238
Query: 248 ITGQIISVDGGFTANGFN 265
I+G+++ VDGGF+ N
Sbjct: 239 ISGEVVHVDGGFSIAAMN 256
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 164 bits (415), Expect = 2e-50
Identities = 58/265 (21%), Positives = 91/265 (34%), Gaps = 28/265 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC----- 73
A++TGG R IG + L G V R+ + L + S +C
Sbjct: 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62
Query: 74 -DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT------- 125
++ D E +I F G+ ++LVNN P + +
Sbjct: 63 LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121
Query: 126 ----NFESTYHLCQLVYPLLKASGVGSIVF-----ISSVGGLSHVGSGSIYGATKAAMNQ 176
N + L + G + + +Y K A+
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVAS 235
LTR A E A +IR N+VAP + +E ++ + PL Q ++A
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAAQIAD 237
Query: 236 LVAYLCLPAASYITGQIISVDGGFT 260
+A+L A YITG + VDGG
Sbjct: 238 AIAFLVSKDAGYITGTTLKVDGGLI 262
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 163 bits (414), Expect = 3e-50
Identities = 47/258 (18%), Positives = 92/258 (35%), Gaps = 19/258 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGL---GAVVHTCSRNEVELNKCLKEWQSKG----- 65
L ++TG +RG G+A +LA L G+V+ +R+E L + +E ++
Sbjct: 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNV---GTNIRKPTIEYSAEEYSKI 122
+ + + A + ++E+ + +L+NN G + E +
Sbjct: 63 VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRN 180
N S L + S S ++ + +Y A KAA + L +
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERLLE---NKEFVDKVIARTPLQRVGEPEEVASLV 237
LA E ++R S AP + + E + E K+ + + A +
Sbjct: 183 LAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240
Query: 238 AYLCLPAASYITGQIISV 255
L ++ +G +
Sbjct: 241 LGLL-QKDTFQSGAHVDF 257
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (403), Expect = 1e-48
Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 13/251 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
S+KG+ A++TGG G+G AT E L G GA K+ + V
Sbjct: 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTN--IRKPTIEYSAEEYSKIMTTNFESTY 131
L + + + +N V + K ++ E++ +++ N T+
Sbjct: 62 SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121
Query: 132 HLCQLVYPLLKAS------GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
++ +LV + + G I+ +SV + Y A+K + +T +A +
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 181
Query: 186 AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLVAYLCLPA 244
A IR ++AP T L+ L E + + + ++ P R+G+P E A LV +
Sbjct: 182 APIGIRVMTIAPGLFGTPLLTSLPE--KVCNFLASQVPFPSRLGDPAEYAHLVQAII--E 237
Query: 245 ASYITGQIISV 255
++ G++I +
Sbjct: 238 NPFLNGEVIRL 248
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 159 bits (403), Expect = 1e-48
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 39/264 (14%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
+++G GIG AT + L G + + E+ + D ++ +
Sbjct: 4 IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTAE 46
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE--------------------YSAEEY 119
R++ I +V +K + ++ LV G + +
Sbjct: 47 GRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQ 106
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLT 178
+ + ++ HL PL A G + V G Y +K A+
Sbjct: 107 PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV 166
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIAR-TPLQRVGEPEEVASLV 237
R A W + +R N++AP T+T L++ L++ + + + P+ R EP E+AS++
Sbjct: 167 RKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVI 226
Query: 238 AYLCLPAASYITGQIISVDGGFTA 261
A+L PAASY+ G I +DGG A
Sbjct: 227 AFLMSPAASYVHGAQIVIDGGIDA 250
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (377), Expect = 2e-44
Identities = 55/258 (21%), Positives = 95/258 (36%), Gaps = 14/258 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L+G +VTG ++GIG+ LA +GA V +R++ L K + G + +
Sbjct: 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 70
Query: 74 D-AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
E+ + + G G L++L+ N TN K M NF S
Sbjct: 71 GTMEDMTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVV 129
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD--NI 190
L P+LK S GSIV +SS+ G + Y A+K A++ ++ E++ N+
Sbjct: 130 LTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 188
Query: 191 RTNSVAPWYTKTSLVERLLENK---------EFVDKVIARTPLQRVGEPEEVASLVAYLC 241
T + + E ++I L++ + + L
Sbjct: 189 SITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 248
Query: 242 LPAASYITGQIISVDGGF 259
+ I + S
Sbjct: 249 RNPSRKILEFLYSTSYNM 266
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (366), Expect = 1e-42
Identities = 48/256 (18%), Positives = 84/256 (32%), Gaps = 27/256 (10%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSR------NEVELNKCLKEWQSKGFVVSGSVC 73
L+TG + GIG LA + + L + + +
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + V ++LV N G + P + + ++ N T +
Sbjct: 65 DVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q P +K G G ++ SVGGL + +Y A+K A+ L +LA + +
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181
Query: 194 SVAPWYTKTSLVERLLENKEFVDKV---------------IARTPLQRVGEPEEVASLVA 238
+ T+ +E++L + E V + + PEEVA +
Sbjct: 182 LIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL 241
Query: 239 YLCL---PAASYITGQ 251
P Y T +
Sbjct: 242 TALRAPKPTLRYFTTE 257
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 142 bits (358), Expect = 4e-42
Identities = 36/251 (14%), Positives = 70/251 (27%), Gaps = 28/251 (11%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ LV GG +G V+ V + E E +
Sbjct: 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTD 50
Query: 76 ASPDQREKLIQEVGSKF-NGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ +Q +++ EVG + K++ ++ G + + + + ++
Sbjct: 51 SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--KDNIR 191
L G + + L YG K A++QL ++LA + +
Sbjct: 111 SHLATK--HLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAA 168
Query: 192 TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251
+V P T K + E + +G
Sbjct: 169 AIAVLPVTLDT----------PMNRKSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGS 218
Query: 252 IISV--DGGFT 260
+I V G T
Sbjct: 219 LIQVVTTDGKT 229
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 142 bits (359), Expect = 7e-42
Identities = 50/253 (19%), Positives = 95/253 (37%), Gaps = 6/253 (2%)
Query: 15 LKGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
LKG L+ G + I + GA + NE L K ++ +
Sbjct: 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYE 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + + L V G L+ +V++V ++ E T E + +
Sbjct: 62 LDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120
Query: 133 LCQLVYPLLKASGVGSIVFISSV--GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ LK ++ G ++ ++ G KAA+ R LA + K +I
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHI 180
Query: 191 RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250
R N+++ +T + + + + PL++ EEV + YL +S ++G
Sbjct: 181 RVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSG 240
Query: 251 QIISVDGGFTANG 263
++ VD G+ G
Sbjct: 241 EVHFVDAGYHVMG 253
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (359), Expect = 9e-42
Identities = 63/283 (22%), Positives = 98/283 (34%), Gaps = 68/283 (24%)
Query: 20 ALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTGG +GIG A V +L L V +R+ +++ Q++G D
Sbjct: 6 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
L + ++ G L++LVNN G + + M TNF T +C +
Sbjct: 66 QSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGA----------------------------- 169
PL+K G +V +SS+ + + S S
Sbjct: 125 PLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182
Query: 170 ------------TKAAMNQLTRNLACEWAK----DNIRTNSVAPWYTKTSLVERLLENKE 213
TK + L+R A + ++ D I N+ P + +T +
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP------ 236
Query: 214 FVDKVIARTPLQRVGEPEEVASLVAYLCL--PAASYITGQIIS 254
+ PEE A YL L P A GQ +S
Sbjct: 237 -----------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS 268
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 136 bits (343), Expect = 2e-39
Identities = 59/281 (20%), Positives = 99/281 (35%), Gaps = 45/281 (16%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG------------- 65
ALVTG + +G++ E L G V R+ E N ++
Sbjct: 5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64
Query: 66 -----FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
+ + +L+ + + G+ ++LVNN + P + + +
Sbjct: 65 VATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHE 123
Query: 121 K--------------IMTTNFESTYHLCQLVY------PLLKASGVGSIVFISSVGGLSH 160
+ +N + Y L + P SI+ +
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183
Query: 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIA 220
+ +IY K A+ LTR+ A E A IR N V P + + +
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM----PPAVWEGHRS 239
Query: 221 RTPL-QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFT 260
+ PL QR EV+ +V +LC A YITG + VDGG++
Sbjct: 240 KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 280
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 131 bits (330), Expect = 5e-38
Identities = 30/244 (12%), Positives = 75/244 (30%), Gaps = 27/244 (11%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
+V GG +G A +E G V + + + +
Sbjct: 5 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWTE 54
Query: 80 QREKLIQEVGSKF-NGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
Q + ++++ S +++ + G + + + ++ + S+ +L
Sbjct: 55 QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLA 114
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK--DNIRTNSV 195
G + + + S YG KAA++ LT +LA + + DN ++
Sbjct: 115 TT--HLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTI 172
Query: 196 APWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLV-AYLCLPAASYITGQIIS 254
P T K + ++ + + ++ +G ++
Sbjct: 173 MPVTLDT----------PMNRKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLK 222
Query: 255 VDGG 258
+
Sbjct: 223 ITTE 226
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 130 bits (328), Expect = 2e-37
Identities = 50/261 (19%), Positives = 87/261 (33%), Gaps = 42/261 (16%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
+ +VTG RGIG V++L + +R+ + + S+ V+
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVL---PLTVT 61
Query: 77 SPDQREKLIQEVGSKFNGK-LNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLC 134
+ + +VG L++L+NN G + E + ++ + N S L
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 135 QLVYPLLKASGVGSIVFISSV------------------GGLSHVGSGSIYGATKAAMNQ 176
Q + PLLK + SV S Y +KAA+N
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASL 236
R LA + DN+ + P + +T K A T + A L
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQT----------NLGGKNAALTV------EQSTAEL 225
Query: 237 VAYLCLPAASYITGQIISVDG 257
++ S+ G+ +
Sbjct: 226 ISSFNKLDNSH-NGRFFMRNL 245
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 128 bits (322), Expect = 3e-36
Identities = 49/285 (17%), Positives = 89/285 (31%), Gaps = 35/285 (12%)
Query: 14 SLKGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK------- 64
L+G A + G G G A + LA GA + + + K
Sbjct: 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64
Query: 65 -------------------------GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99
V + +S ++ + V F ++
Sbjct: 65 PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124
Query: 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS 159
+ + ++ + + ++ + + G SI
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184
Query: 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDN-IRTNSVAPWYTKTSLVERLLENKEFVDKV 218
G G + KAA+ TR LA E + IR N+++ + + + ++
Sbjct: 185 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYS 244
Query: 219 IARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANG 263
P+Q+ +EV + A+L P AS ITG I VD G + G
Sbjct: 245 YNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 289
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 119 bits (297), Expect = 5e-33
Identities = 47/259 (18%), Positives = 88/259 (33%), Gaps = 37/259 (14%)
Query: 19 TALVTGGTRGIGQATVEELAGL---GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ L+TG RG+G V+ L L + T RN + + L++ + D
Sbjct: 4 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 62
Query: 76 ASPDQREKLIQEVG--SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ D +KL+ ++ +K G + N ++E + TN L
Sbjct: 63 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122
Query: 134 CQLVYPLLKASGVGSIVF--------------ISSVGGLSHVGSGSIYGATKAAMNQLTR 179
+ PLLK + + I + G Y +K+A+N T+
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
+L+ + I S+ P + KT + + PL ++ ++
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGG-------------SSAPLDVPTSTGQIVQTISK 229
Query: 240 LCLPAASYITGQIISVDGG 258
L G ++ DG
Sbjct: 230 L----GEKQNGGFVNYDGT 244
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 119 bits (298), Expect = 6e-33
Identities = 37/260 (14%), Positives = 68/260 (26%), Gaps = 15/260 (5%)
Query: 15 LKGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L G LV+G I GA + + + L + + + +
Sbjct: 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
KL+ +V+++G + + +
Sbjct: 64 VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 123
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC--EWAKDNI 190
+ I + + T A + N E K +
Sbjct: 124 YSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGV 183
Query: 191 RTNSVAPWYTKTSLVERLLEN----------KEFVDKVIARTPLQR-VGEPEEVASLVAY 239
R+N VA +T + ++ + + R P+ + + VA V
Sbjct: 184 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA 243
Query: 240 LCLPAASYITGQIISVDGGF 259
L TG II DGG
Sbjct: 244 LLSDWLPATTGDIIYADGGA 263
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 97.7 bits (241), Expect = 3e-24
Identities = 47/324 (14%), Positives = 92/324 (28%), Gaps = 82/324 (25%)
Query: 20 ALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNK--------------------- 56
+ G T G G +EL+ + V
Sbjct: 5 CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64
Query: 57 -----------CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGT 105
+ + E + + K+ GK+N+LV+++
Sbjct: 65 NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLAN 123
Query: 106 --NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163
++K + S + Y ++ + S LC+ ++K + + +
Sbjct: 124 AKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGYG 183
Query: 164 GSIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKT-------------------- 202
G + KAA+ TR LA + NIR N+++ K+
Sbjct: 184 G-GMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQN 242
Query: 203 -----------------------SLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY 239
S + ++ PL++ ++ S+ ++
Sbjct: 243 KNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASF 302
Query: 240 LCLPAASYITGQIISVDGGFTANG 263
L + ITGQ I VD G
Sbjct: 303 LLSRESRAITGQTIYVDNGLNIMF 326
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 74.5 bits (182), Expect = 7e-17
Identities = 30/183 (16%), Positives = 60/183 (32%), Gaps = 15/183 (8%)
Query: 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
K++ S+KG A+V GT +G + LAG GA V C R + + V
Sbjct: 15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK-V 73
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
+ + + A R + ++ + + + + +
Sbjct: 74 NVTAAETADDASRAEAVKGA--------HFVFTAGAIGLE----LLPQAAWQNESSIEIV 121
Query: 129 STYHLCQ-LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+ Y+ L + A+ G G +G G +A + +L + +
Sbjct: 122 ADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIG-GLKLKLHRACIAKLFESSEGVFDA 180
Query: 188 DNI 190
+ I
Sbjct: 181 EEI 183
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 73.2 bits (178), Expect = 3e-16
Identities = 24/194 (12%), Positives = 58/194 (29%), Gaps = 4/194 (2%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M + GGT +G+ LA LG + SR E + E++ S +
Sbjct: 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
+ + + ++ + K + + S ++V
Sbjct: 61 AAEACDIAVLTIPWEHA-IDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIV 119
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+L++ V S + +++ + + ++ + + +
Sbjct: 120 AEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179
Query: 198 WYTKTSLVERLLEN 211
S RL+E+
Sbjct: 180 GPLSNS---RLVES 190
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 63.9 bits (154), Expect = 1e-12
Identities = 43/240 (17%), Positives = 76/240 (31%), Gaps = 31/240 (12%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV---ELNKCLKEWQSKG 65
W G T LVTGGT G+G LA GA + SR+ + + E ++ G
Sbjct: 3 DDEWKPTG-TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG 61
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT 125
+ + CD + +L+ +G + T + E +
Sbjct: 62 ARTTVAACDVTDRESVRELLGGIGDDVPLSAVF--HAAATLDDGTVDTLTGERIERASRA 119
Query: 126 NFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
+L +L L + + V SS Y A ++ LA +
Sbjct: 120 KVLGARNLHELTREL----DLTAFVLFSSFASAFGAPGLGGYAPGNAYLD----GLAQQR 171
Query: 186 AKDNIRTNSVAP-WYTKTSLVERLLENKEFVDKVIARTPLQRVG----EPEEVASLVAYL 240
D + +VA + + + E + ++ +R G PE +
Sbjct: 172 RSDGLPATAVAWGTWAGSGMAEGPVADR-----------FRRHGVIEMPPETACRALQNA 220
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 46.3 bits (109), Expect = 1e-06
Identities = 30/183 (16%), Positives = 48/183 (26%), Gaps = 33/183 (18%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSR--------NEVELNKCLKEWQSKGFVVSG 70
AL+TG T G E L G VH R + + K + G
Sbjct: 3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
+ D ++ + + +Q + V + S E + T
Sbjct: 63 DLSDTSNLTRILREVQ-------------PDEVYNLGAMSHVAVSFESPEYTADVDAMGT 109
Query: 131 YHLCQLVYPLLKASGVGSIVFISS--VGGLSH---------VGSGSIYGATKAAMNQLTR 179
L + + L S+ + GL S Y K +T
Sbjct: 110 LRLLEAIR-FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITV 168
Query: 180 NLA 182
N
Sbjct: 169 NYR 171
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (99), Expect = 2e-05
Identities = 32/183 (17%), Positives = 46/183 (25%), Gaps = 34/183 (18%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSR--------NEVELNKCLKEWQSKGF-VVSG 70
AL+TG T G E L G VH R L K + + G
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
+ D K+I EV + + ++ S + + T
Sbjct: 64 DLTD---STCLVKIINEVK----------PTEIYNLGAQSHVKISFDLAEYTADVDGVGT 110
Query: 131 YHLCQLVYPLLKASGVGSIVFISS--VGGLSH---------VGSGSIYGATKAAMNQLTR 179
L V S+ + G S YGA K +
Sbjct: 111 LRLLDAVK-TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVV 169
Query: 180 NLA 182
N
Sbjct: 170 NFR 172
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 42.1 bits (97), Expect = 4e-05
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-----FVVSG 70
+G LVTG + VE+L G V +R+ +L K W +K V
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69
Query: 71 SVCD 74
+
Sbjct: 70 DMLK 73
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 41.4 bits (95), Expect = 6e-05
Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV--VSGSV 72
+G VTG T G L +GA V S + + + + G +
Sbjct: 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDI 65
Query: 73 CDAASPDQREK 83
D + +
Sbjct: 66 RDQNKLLESIR 76
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 41.3 bits (96), Expect = 8e-05
Identities = 43/277 (15%), Positives = 83/277 (29%), Gaps = 52/277 (18%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
M L+TGG IG A V + V + N S+ + D
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+ ++ ++ + + +++ + ++ S + + TN TY L ++
Sbjct: 61 DSAEITRIFEQY------QPDAVMHLAA----ESHVDRSITGPAAFIETNIVGTYALLEV 110
Query: 137 -----VYPLLKASGVGSIVFISSV---GGLSHVGSG------------------SIYGAT 170
IS+ G L H S Y A+
Sbjct: 111 ARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSAS 170
Query: 171 KAAMNQLTRNLACEWAKDNIRT---NSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRV 227
KA+ + L R + I T N+ P++ L+ + + PL
Sbjct: 171 KASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPL------VILNALEGKPLPIY 224
Query: 228 GEPEE------VASLVAYLCLPAASYITGQIISVDGG 258
G+ ++ V L + G+ ++ G
Sbjct: 225 GKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGH 261
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 39.4 bits (91), Expect = 2e-04
Identities = 46/230 (20%), Positives = 70/230 (30%), Gaps = 30/230 (13%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVTGG IG V +L V + +G+ + A
Sbjct: 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS----------LTYAGNRANLAP 50
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D +L G + L I E + + E+ Q +
Sbjct: 51 VDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTL 110
Query: 138 YPLLKASGVGSIVFIS--SVGGLSHVGSG---------SIYGATKAAMNQLTRNLACEWA 186
+GVG +V +S V G GS S Y A+KA + + R +
Sbjct: 111 LQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYG 170
Query: 187 KD--NIR-TNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEV 233
D R N+ P+ L+ FV ++ L G+ V
Sbjct: 171 LDVRITRCCNNYGPYQHPEKLIPL------FVTNLLDGGTLPLYGDGANV 214
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (91), Expect = 3e-04
Identities = 27/178 (15%), Positives = 51/178 (28%), Gaps = 39/178 (21%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
L+TGG +G ++L G V + ++ W + + + D
Sbjct: 5 LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW------IGHENFELINHDV 58
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
E L EV ++ L + K + TN T ++ L
Sbjct: 59 VEPLYIEVDQIYH-----LASPAS-------PPNYMYNPIKTLKTNTIGTLNMLGLA--- 103
Query: 141 LKASGVGSIVFISS----------------VGGLSHVGSGSIYGATKAAMNQLTRNLA 182
K G ++ S+ G ++ +G + Y K +
Sbjct: 104 -KRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM 159
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 38.8 bits (89), Expect = 4e-04
Identities = 30/181 (16%), Positives = 51/181 (28%), Gaps = 21/181 (11%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC---LKEWQSKGF-VVSGS 71
+ +VTGG IG V + VH +++ L+ +V G
Sbjct: 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGD 60
Query: 72 VCDAASPDQREKLIQEV----------GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
+ DA D+ + S + I N +GT E K
Sbjct: 61 IADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTY-------TLLEAARK 113
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ PL + ++ S Y +TKAA + + +
Sbjct: 114 YDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAW 173
Query: 182 A 182
Sbjct: 174 V 174
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 38.5 bits (88), Expect = 5e-04
Identities = 10/62 (16%), Positives = 19/62 (30%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ T V G T G + + A +G V + L + + G + +
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN 61
Query: 76 AS 77
Sbjct: 62 VP 63
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 38.4 bits (88), Expect = 6e-04
Identities = 15/174 (8%), Positives = 41/174 (23%), Gaps = 3/174 (1%)
Query: 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
+ W + + +TG I L G V + N+ + E
Sbjct: 7 REQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKK---NEHMTEDMFCDEFH 63
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
+ + + + + V + + ++ + + N
Sbjct: 64 LVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGI 123
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
+ + + + +G K A +L ++
Sbjct: 124 KRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYN 177
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.3 bits (85), Expect = 0.001
Identities = 8/43 (18%), Positives = 13/43 (30%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57
+ + G T G T+ + G V R+ L
Sbjct: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE 43
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 36.3 bits (82), Expect = 0.003
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55
M L+TG +G+ ++L G V ++++
Sbjct: 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDIT 39
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 36.0 bits (82), Expect = 0.003
Identities = 24/169 (14%), Positives = 40/169 (23%), Gaps = 31/169 (18%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-------VVSGSVC 73
+ G +G A +L G V R ELN F V +
Sbjct: 6 FIAGHRGMVGSAIRRQLEQRGDVE-LVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAK 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ + NI+ ++ K S+ Y K+ + L
Sbjct: 65 VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELL 124
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
+ P + Y K A +L +
Sbjct: 125 QGTLEP-----------------------TNEPYAIAKIAGIKLCESYN 150
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 35.6 bits (80), Expect = 0.004
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQ 62
T LVTG + GQ ++L V R+ K E
Sbjct: 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD 50
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 272 | |||
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.89 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.82 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.81 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.81 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.81 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.8 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.77 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.77 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.77 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.77 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.76 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.76 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.75 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.75 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.74 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.74 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.74 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.74 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.73 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.72 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.71 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.68 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.63 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.6 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.43 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.4 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.38 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.28 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.24 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.21 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.19 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 99.07 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.28 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 98.25 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.23 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.11 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.09 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 98.01 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 98.0 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.95 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.94 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.92 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.91 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.87 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.86 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.83 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.77 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.74 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.73 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.67 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.65 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.64 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.61 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.58 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.57 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.55 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.5 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.45 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.44 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 97.43 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.41 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.36 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.31 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.3 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.26 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.25 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.25 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.23 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.22 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.21 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.2 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.19 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.17 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.16 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.16 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.13 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.12 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.09 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.07 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.03 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.98 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.98 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.95 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.95 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.94 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.92 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.92 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.91 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.9 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.9 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.88 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.86 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.82 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.79 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.78 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.7 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.68 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.55 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.48 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 96.34 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 96.34 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.31 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.21 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.11 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.04 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 95.87 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.84 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.8 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 95.69 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 95.59 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.51 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.51 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 95.4 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.37 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.2 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.2 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.2 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.13 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 95.13 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.99 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 94.78 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 94.78 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 94.78 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 94.75 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 94.71 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 94.6 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 94.59 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 94.38 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 94.35 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.34 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 94.33 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 94.25 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 94.17 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.15 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 94.06 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 94.06 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.94 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 93.9 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 93.82 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.77 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 93.74 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 93.74 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 93.72 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 93.68 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 93.52 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 93.48 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 93.42 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 93.32 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 93.05 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 92.99 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 92.93 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 92.71 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 92.61 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 92.58 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 92.49 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 92.33 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 92.26 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 92.18 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 92.06 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 92.03 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 92.0 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 91.95 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 91.9 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 91.87 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 91.62 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 91.44 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 91.37 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 91.37 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 91.35 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 91.25 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 91.15 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 91.0 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 90.97 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 90.92 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 90.88 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 90.71 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 90.52 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 90.42 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 90.32 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 90.27 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 90.19 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 90.14 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 89.89 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 89.86 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 89.78 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 89.67 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 89.59 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 89.55 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 89.48 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 89.4 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 88.93 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 88.83 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 88.75 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 88.67 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 88.53 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 88.36 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 87.79 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 87.76 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 87.72 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 87.7 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 87.05 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 87.02 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 86.87 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 86.86 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 86.62 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 86.52 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 86.21 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 85.74 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 85.2 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 85.05 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 84.72 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 84.65 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 84.65 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 84.5 | |
| d1c4oa2 | 174 | Nucleotide excision repair enzyme UvrB {Thermus th | 84.25 | |
| d1peya_ | 119 | Sporulation response regulator Spo0F {Bacillus sub | 84.0 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 83.91 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 83.79 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 83.72 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 83.66 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 83.58 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 83.56 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 83.52 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 83.47 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 83.4 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 82.97 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 82.89 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 82.81 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 82.8 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 82.6 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 82.23 | |
| d1cjca1 | 225 | Adrenodoxin reductase of mitochondrial p450 system | 82.22 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 82.12 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 82.04 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 81.56 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 81.47 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 81.42 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 81.25 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 80.87 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 80.77 |
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=2.5e-59 Score=392.78 Aligned_cols=251 Identities=59% Similarity=0.937 Sum_probs=238.1
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++|+||++|||||++|||+++|+.|+++|++|++++|+++++++..+++...+.++..+.+|++|+++++++++++.++
T Consensus 3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||
T Consensus 83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 162 (259)
T d2ae2a_ 83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK 162 (259)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence 85589999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH---HHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK---EFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+|+++|+|++|.||+++|||||+|+||+++|+|.+....++ +...+.....|++++.+|+|+|+++.||+|+.+.|+
T Consensus 163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~i 242 (259)
T d2ae2a_ 163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 242 (259)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence 99999999999999999999999999999999988766553 345666778999999999999999999999999999
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
|||+|.+|||++.+
T Consensus 243 tG~~i~VDGG~~a~ 256 (259)
T d2ae2a_ 243 TGQIIYVDGGLMAN 256 (259)
T ss_dssp CSCEEEESTTGGGC
T ss_pred cCcEEEECCCeEee
Confidence 99999999999875
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.3e-59 Score=392.58 Aligned_cols=249 Identities=36% Similarity=0.597 Sum_probs=235.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++|+||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+ .+.++..+++|++++++++++++++.++
T Consensus 1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 80 (251)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999998888754 4778889999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC-CCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~-~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||+....++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||+++|..+ ..+.++..+|++|
T Consensus 81 ~-g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~as 159 (251)
T d1vl8a_ 81 F-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS 159 (251)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHH
Confidence 9 7999999999998889999999999999999999999999999999999999899999999765 4467788999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+++|+|+++.|++++|||||+|+||+++|+|......+++..+......|++++.+|+|+|+++.||+|+++.|+||
T Consensus 160 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG 239 (251)
T d1vl8a_ 160 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTG 239 (251)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred HHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcC
Confidence 99999999999999999999999999999999999988888888888889999999999999999999999999999999
Q ss_pred cEEEeCCCcCCC
Q 024125 251 QIISVDGGFTAN 262 (272)
Q Consensus 251 ~~i~~dgG~~~~ 262 (272)
|+|.+|||++.+
T Consensus 240 ~~i~vDGG~ta~ 251 (251)
T d1vl8a_ 240 QIIFVDGGWTAN 251 (251)
T ss_dssp CEEEESTTGGGC
T ss_pred cEEEeCcCeeCc
Confidence 999999999864
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.9e-59 Score=390.03 Aligned_cols=251 Identities=33% Similarity=0.508 Sum_probs=236.2
Q ss_pred ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 8 ~~~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
+.+..|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.++..+++|+++++++++++++
T Consensus 2 ~~~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~ 81 (255)
T d1fmca_ 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF 81 (255)
T ss_dssp CCGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Confidence 44567889999999999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+.+++ +++|++|||||.....++ +.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+.++..+|
T Consensus 82 ~~~~~-g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y 159 (255)
T d1fmca_ 82 AISKL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSY 159 (255)
T ss_dssp HHHHH-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHH
T ss_pred HHHHc-CCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccc
Confidence 99999 799999999998777665 7899999999999999999999999999999998999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+.+|+|++|.|++++|||||+|+||+++|++..... .++..+......|++++++|+|+|+++.||+|+.+.|
T Consensus 160 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~ 238 (255)
T d1fmca_ 160 ASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW 238 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred hhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 999999999999999999999999999999999999987664 3566777888899999999999999999999999999
Q ss_pred ccccEEEeCCCcCC
Q 024125 248 ITGQIISVDGGFTA 261 (272)
Q Consensus 248 ~~G~~i~~dgG~~~ 261 (272)
+|||+|.+|||+..
T Consensus 239 itG~~i~vDGG~~~ 252 (255)
T d1fmca_ 239 VSGQILTVSGGGVQ 252 (255)
T ss_dssp CCSCEEEESTTSCC
T ss_pred CcCCEEEECcCccc
Confidence 99999999999854
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=6.9e-59 Score=390.24 Aligned_cols=254 Identities=27% Similarity=0.387 Sum_probs=238.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++++.+.++..+++|++|+++++++++++.+++
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 69999999999999999999999999999999999975 56788888888888899999999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-eEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||+..+.++.+.+.++|++++++|+.++++++++++|+|.+++.+ +||++||..+..+.++..+|++||
T Consensus 84 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asK 162 (261)
T d1geea_ 84 -GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK 162 (261)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred -CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCC
Confidence 799999999999888999999999999999999999999999999999887655 589999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+|+.+|+|++|.||+++|||||+|+||+++|+|......+++.........|++++.+|+|+|+++.||+|+.+.|+|||
T Consensus 163 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~ 242 (261)
T d1geea_ 163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242 (261)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred ccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCC
Confidence 99999999999999999999999999999999998877777788888889999999999999999999999999999999
Q ss_pred EEEeCCCcCCC-CCCCCC
Q 024125 252 IISVDGGFTAN-GFNPGI 268 (272)
Q Consensus 252 ~i~~dgG~~~~-~~~~~~ 268 (272)
+|.+|||+++. .+.+|.
T Consensus 243 ~i~vDGG~sl~p~~~~g~ 260 (261)
T d1geea_ 243 TLFADGGMTLYPSFQAGR 260 (261)
T ss_dssp EEEESTTGGGCGGGGGGC
T ss_pred eEEECCCeeCCCCCCCCC
Confidence 99999999986 555543
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5e-59 Score=389.26 Aligned_cols=248 Identities=28% Similarity=0.458 Sum_probs=232.1
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
..++|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++++.+.++..+++|++|+++++++++++.+
T Consensus 4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 83 (251)
T d2c07a1 4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT 83 (251)
T ss_dssp CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 34679999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
++ +++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++.|+|||+||..+..+.++..+|++|
T Consensus 84 ~~-g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~as 162 (251)
T d2c07a1 84 EH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS 162 (251)
T ss_dssp HC-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred hc-CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHH
Confidence 99 79999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+++|+|++|.||+++|||||+|+||+++|+|.... .++..+......|++++.+|+|+|+++.||+++.+.|+||
T Consensus 163 Kaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG 240 (251)
T d2c07a1 163 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYING 240 (251)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence 99999999999999999999999999999999998765 3566778888899999999999999999999999999999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
|+|.+|||++.
T Consensus 241 ~~i~vDGG~sp 251 (251)
T d2c07a1 241 RVFVIDGGLSP 251 (251)
T ss_dssp CEEEESTTSCC
T ss_pred cEEEECCCcCc
Confidence 99999999873
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.6e-59 Score=393.77 Aligned_cols=253 Identities=63% Similarity=1.036 Sum_probs=205.1
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.+++|+||++|||||++|||+++|+.|+++|++|++++|+++++++..+++...+.++..+.+|++++++++++++++.+
T Consensus 2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d1xq1a_ 2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 81 (259)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
++++++|++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|++|
T Consensus 82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as 161 (259)
T d1xq1a_ 82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT 161 (259)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccc
Confidence 98668999999999988899999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+.+|+|++|.|++++|||||+|+||+++|+|...... ++..+......|++++.+|+|+|+++.||+|+.+.|+||
T Consensus 162 Kaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG 240 (259)
T d1xq1a_ 162 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD-DEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITG 240 (259)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTTCCS
T ss_pred ccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 9999999999999999999999999999999999876543 344556667889999999999999999999999999999
Q ss_pred cEEEeCCCcCCCCC
Q 024125 251 QIISVDGGFTANGF 264 (272)
Q Consensus 251 ~~i~~dgG~~~~~~ 264 (272)
|+|.+|||++++|+
T Consensus 241 ~~i~vDGG~s~~g~ 254 (259)
T d1xq1a_ 241 QTICVDGGLTVNGF 254 (259)
T ss_dssp CEEECCCCEEETTE
T ss_pred cEEEeCCCEECCCC
Confidence 99999999999854
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.7e-59 Score=386.19 Aligned_cols=242 Identities=31% Similarity=0.473 Sum_probs=229.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++. .++..+.+|++++++++++++++.+++
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 76 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEF- 76 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhccc-
Confidence 5899999999999999999999999999999999999999999888774 367788999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+|||+||..+..+.++..+|++||+|
T Consensus 77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 156 (243)
T d1q7ba_ 77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG 156 (243)
T ss_dssp CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+++|+|++|.||+++|||||+|+||+++|+|..... ++.........|++++.+|+|+|+++.||+|+.+.|+|||+|
T Consensus 157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~--~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i 234 (243)
T d1q7ba_ 157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS--DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL 234 (243)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC--HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh--hhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence 999999999999999999999999999999987763 455677788899999999999999999999999999999999
Q ss_pred EeCCCcCC
Q 024125 254 SVDGGFTA 261 (272)
Q Consensus 254 ~~dgG~~~ 261 (272)
.+|||+++
T Consensus 235 ~vdGG~~~ 242 (243)
T d1q7ba_ 235 HVNGGMYM 242 (243)
T ss_dssp EESTTSSC
T ss_pred EECCCeEe
Confidence 99999886
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=1e-57 Score=382.57 Aligned_cols=248 Identities=29% Similarity=0.477 Sum_probs=229.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+++|++|+++++++++++.++
T Consensus 1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999999999999988887654 557889999999999999999999999
Q ss_pred cCCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||+. ...++.+.+.++|++++++|+.++++++|+++|+|++++.|+|||+||..+..+.++..+|++|
T Consensus 81 ~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as 159 (258)
T d1iy8a_ 81 F-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA 159 (258)
T ss_dssp H-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred h-CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence 9 7999999999975 4567889999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
|+|+.+|+|++|.||+++|||||+|+||+++|+|....... .+..+.+....|++++.+|+|+|+++.||+|+.
T Consensus 160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~ 239 (258)
T d1iy8a_ 160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD 239 (258)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 99999999999999999999999999999999998655321 345666778899999999999999999999999
Q ss_pred CCCccccEEEeCCCcCCC
Q 024125 245 ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~~~ 262 (272)
+.|+|||+|.+|||++..
T Consensus 240 s~~itG~~i~VDGG~saa 257 (258)
T d1iy8a_ 240 ASYVNATVVPIDGGQSAA 257 (258)
T ss_dssp GTTCCSCEEEESTTTTTB
T ss_pred hcCCcCceEEcCcchhcc
Confidence 999999999999999864
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=4.7e-58 Score=382.44 Aligned_cols=246 Identities=30% Similarity=0.393 Sum_probs=213.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|+||++|||||++|||+++|+.|+++|++|++++|++++ +..+.+++.+.++..+.+|++|+++++++++++.+++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~- 78 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF- 78 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-
Confidence 4889999999999999999999999999999999998653 2334456667889999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||+....++.+.+.++|++++++|+.++++++|+++|+|++++.|+|||+||..+..+.++..+|++||+|
T Consensus 79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 158 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAA 158 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhcc
Confidence 79999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+.+|+|++|.||+++|||||+|+||+++|+|..................|++++.+|+|+|+++.||+|+.+.|+|||+|
T Consensus 159 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i 238 (247)
T d2ew8a1 159 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTL 238 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence 99999999999999999999999999999998765433322222233458899999999999999999999999999999
Q ss_pred EeCCCcCCC
Q 024125 254 SVDGGFTAN 262 (272)
Q Consensus 254 ~~dgG~~~~ 262 (272)
.+|||++.|
T Consensus 239 ~vDGG~~~h 247 (247)
T d2ew8a1 239 AVDGGMVRH 247 (247)
T ss_dssp EESSSCCCC
T ss_pred EECCCEecC
Confidence 999999865
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=1.2e-57 Score=382.47 Aligned_cols=244 Identities=34% Similarity=0.516 Sum_probs=229.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+.++..+++|++|+++++++++++.+++ ++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~ 79 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GP 79 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence 48999999999999999999999999999999999999999999999888899999999999999999999999999 79
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH--HHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL--LKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~--~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+|++|||||+....++.+.+.++|++++++|+.++++++|+++|+ |.+++.|+||+++|..+..+.++..+|++||+|
T Consensus 80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaa 159 (257)
T d2rhca1 80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG 159 (257)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHH
Confidence 999999999998899999999999999999999999999999997 566677899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCC
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~ 244 (272)
+.+|+|++|.||+++|||||+|+||+++|+|...... .++..+.+....|++++.+|+|+|+++.||+|+.
T Consensus 160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~ 239 (257)
T d2rhca1 160 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 239 (257)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 9999999999999999999999999999999866532 2456677788899999999999999999999999
Q ss_pred CCCccccEEEeCCCcC
Q 024125 245 ASYITGQIISVDGGFT 260 (272)
Q Consensus 245 ~~~~~G~~i~~dgG~~ 260 (272)
+.|+|||+|.+|||.+
T Consensus 240 s~~itG~~i~vDGG~~ 255 (257)
T d2rhca1 240 AAAVTAQALNVCGGLG 255 (257)
T ss_dssp GTTCCSCEEEESTTCC
T ss_pred hcCCcCceEEECcCcc
Confidence 9999999999999974
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=3.8e-57 Score=379.15 Aligned_cols=252 Identities=60% Similarity=0.991 Sum_probs=233.3
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+++|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+..+.++.+|+++.++++++++++.++
T Consensus 1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 80 (258)
T d1ae1a_ 1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 80 (258)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++++|++|||||.....++.+++.++|++++++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|+++|
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK 160 (258)
T d1ae1a_ 81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK 160 (258)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHH
Confidence 86689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE----NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
+|+++|+|.+|+||+++|||||+|+||+++|+|...... ..+..+.+....|++++.+|+|+|+++.||+|+++.|
T Consensus 161 ~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~ 240 (258)
T d1ae1a_ 161 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 240 (258)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence 999999999999999999999999999999999765543 2467777788899999999999999999999999999
Q ss_pred ccccEEEeCCCcCCCC
Q 024125 248 ITGQIISVDGGFTANG 263 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~ 263 (272)
+||++|.+|||++.+|
T Consensus 241 itG~~i~vDGG~s~~g 256 (258)
T d1ae1a_ 241 ITGQIIWADGGFTANG 256 (258)
T ss_dssp CCSCEEEESTTGGGCS
T ss_pred CcCcEEEeCCCeeccC
Confidence 9999999999999985
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=3.2e-57 Score=379.45 Aligned_cols=246 Identities=28% Similarity=0.374 Sum_probs=227.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|.|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++ +.++..+++|++++++++++++++.+++
T Consensus 1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 77 (256)
T d1k2wa_ 1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 5689999999999999999999999999999999999999998888776 4578889999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+ ++.|+||++||..+..+.++..+|++||
T Consensus 78 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 156 (256)
T d1k2wa_ 78 -GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK 156 (256)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred -CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence 79999999999988899999999999999999999999999999998655 4568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh---------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE---------NKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+|+++|+|++|.||+++|||||+|+||+++|+|...... ..+....+....|++++.+|+|+|+++.||+|
T Consensus 157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S 236 (256)
T d1k2wa_ 157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLAT 236 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999765432 12445666778999999999999999999999
Q ss_pred CCCCCccccEEEeCCCcCCC
Q 024125 243 PAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~~ 262 (272)
+++.|+|||+|.+|||++|.
T Consensus 237 ~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 237 PEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp GGGTTCCSCEEEESTTSSCC
T ss_pred chhCCccCceEEECcchhhC
Confidence 99999999999999998874
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1.6e-57 Score=382.31 Aligned_cols=246 Identities=29% Similarity=0.431 Sum_probs=219.4
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|+||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++.+ .+.++.++++|++|+++++++++++.+++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999997 5667777777754 46789999999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||+....++.+.+.++|+++|++|+.++++++++++|+|++++.|+||++||..+..+.++..+|++||+
T Consensus 82 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 160 (260)
T d1x1ta1 82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred -CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence 7999999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----------KEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
|+.+|+|++|.|++++|||||+|+||+++|+|....... ....+.+....|++++.+|+|+|+++.||+|
T Consensus 161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S 240 (260)
T d1x1ta1 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999998655332 1122334567899999999999999999999
Q ss_pred CCCCCccccEEEeCCCcCC
Q 024125 243 PAASYITGQIISVDGGFTA 261 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~ 261 (272)
+.+.|+|||+|.+|||++.
T Consensus 241 ~~a~~itG~~i~vDGG~ta 259 (260)
T d1x1ta1 241 DAAAQITGTTVSVDGGWTA 259 (260)
T ss_dssp GGGTTCCSCEEEESTTGGG
T ss_pred hhhCCCcCCEEEECcchhc
Confidence 9999999999999999875
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.2e-57 Score=376.15 Aligned_cols=241 Identities=30% Similarity=0.415 Sum_probs=223.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|+|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++ +...+.+|++|+++++++++++.+++
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 75 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL 75 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999999888777654 35578999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||+....++.+.+.++|++++++|+.++++++|+++|+|++++.+.|+++||. +..+.++..+|++||+
T Consensus 76 -g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~Y~asKa 153 (242)
T d1ulsa_ 76 -GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQANYAASMA 153 (242)
T ss_dssp -SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHHHHHHHH
T ss_pred -CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCCcchHHHHH
Confidence 79999999999998999999999999999999999999999999999999887888887774 5677888999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
|+++|+|++|.||+++|||||+|+||+++|+|.... +++..+......|++++.+|+|+|+++.||+|+++.|+|||+
T Consensus 154 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~ 231 (242)
T d1ulsa_ 154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQV 231 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcE
Confidence 999999999999999999999999999999998765 345667778889999999999999999999999999999999
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
|.+|||++++
T Consensus 232 i~vDGG~t~g 241 (242)
T d1ulsa_ 232 LFVDGGRTIG 241 (242)
T ss_dssp EEESTTTTTT
T ss_pred EEECCCccCC
Confidence 9999999985
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=3.1e-57 Score=376.67 Aligned_cols=241 Identities=28% Similarity=0.430 Sum_probs=227.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+++|||||++|||+++|++|+++|++|++. .|+++.++++.++++..+.++..+++|++|+++++++++++.+++ +++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 80 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI 80 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence 589999999999999999999999999886 567888889999998888899999999999999999999999999 799
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++.|+|||+||..+..+.++...|++||+|+.+
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ 160 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG 160 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-cCCCCCccccEEEe
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC-LPAASYITGQIISV 255 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~-~~~~~~~~G~~i~~ 255 (272)
|+|+++.||+++|||||+|+||+++|+|.... .++..+......|++++.+|+|+|+++.||+ ++.+.|+|||+|.+
T Consensus 161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~v 238 (244)
T d1edoa_ 161 FSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTI 238 (244)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEE
T ss_pred ChHHHHHHHhhhCcEEEEEecceeccHHHHHh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEe
Confidence 99999999999999999999999999998876 3566777888899999999999999999996 89999999999999
Q ss_pred CCCcCC
Q 024125 256 DGGFTA 261 (272)
Q Consensus 256 dgG~~~ 261 (272)
|||+++
T Consensus 239 dGG~si 244 (244)
T d1edoa_ 239 DGGIAI 244 (244)
T ss_dssp STTTTC
T ss_pred CCCeeC
Confidence 999875
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=6.2e-57 Score=377.59 Aligned_cols=244 Identities=27% Similarity=0.345 Sum_probs=228.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.++..+++|++|+++++++++++.+++ +++|
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 80 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD 80 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence 678999999999999999999999999999999999999999999888899999999999999999999999999 7999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecCCCCCCCCCCChhhHHHHHHHHH
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~ 176 (272)
++|||||+....++.+.+.++|++++++|+.++++++|+++|+|.+++ .++|+++||..+..+.++...|++||+|+++
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 160 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG 160 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence 999999998889999999999999999999999999999999876654 5789999999999999999999999999999
Q ss_pred HHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---------KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 177 ~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
|+|++|.||+++|||||+|+||+++|+|....... ......+....|++++.+|+|+|+++.||+|+++.|
T Consensus 161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~ 240 (255)
T d1gega_ 161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 240 (255)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence 99999999999999999999999999998765332 234556677899999999999999999999999999
Q ss_pred ccccEEEeCCCcCCC
Q 024125 248 ITGQIISVDGGFTAN 262 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~ 262 (272)
+|||+|.+|||+.++
T Consensus 241 itG~~i~vDGG~~~n 255 (255)
T d1gega_ 241 MTGQSLLIDGGMVFN 255 (255)
T ss_dssp CCSCEEEESSSSSCC
T ss_pred ccCcEEEecCCEEeC
Confidence 999999999999875
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=5.4e-57 Score=374.74 Aligned_cols=238 Identities=34% Similarity=0.437 Sum_probs=223.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++. .++..+++|++|+++++++++++.+++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 78 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF- 78 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh-
Confidence 4889999999999999999999999999999999999999988887764 467788999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++++++|+.++++++|.++|+|++++.|+||++||..+..+.++..+|++||+|
T Consensus 79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 158 (244)
T d1nffa_ 79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA 158 (244)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHH
Confidence 68999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+++|+|++|.||+++|||||+|+||+++|+|.....+. ....|++++.+|+|+|+++.||+++++.|+|||+|
T Consensus 159 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-------~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i 231 (244)
T d1nffa_ 159 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEF 231 (244)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-------CSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-------HHhccccCCCCHHHHHHHHHHHhChhhCCCcCCEE
Confidence 99999999999999999999999999999997654322 34579999999999999999999999999999999
Q ss_pred EeCCCcCCC
Q 024125 254 SVDGGFTAN 262 (272)
Q Consensus 254 ~~dgG~~~~ 262 (272)
.+|||++.+
T Consensus 232 ~vDGG~~ag 240 (244)
T d1nffa_ 232 VVDGGTVAG 240 (244)
T ss_dssp EESTTGGGS
T ss_pred EECCCeecc
Confidence 999999876
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=1.1e-56 Score=375.09 Aligned_cols=245 Identities=31% Similarity=0.450 Sum_probs=226.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. +.++.++.+|++|+++++++++++.+++
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF- 80 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 48999999999999999999999999999999999999999999888754 4578889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-eEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++.| +||++||..+..+.++...|++||+
T Consensus 81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa 160 (251)
T d1zk4a1 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG 160 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence 799999999999999999999999999999999999999999999999988754 8999999999999999999999999
Q ss_pred HHHHHHHHHHHH--HccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 173 AMNQLTRNLACE--WAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 173 a~~~~~~~la~e--l~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+.+|+|++|.| ++++|||||+|+||+++|+|...... ++.........|++++.+|+|+|+++.||+|+++.|+||
T Consensus 161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG 239 (251)
T d1zk4a1 161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-AEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATG 239 (251)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-HHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence 999999999998 67899999999999999999877643 344444556789999999999999999999999999999
Q ss_pred cEEEeCCCcCC
Q 024125 251 QIISVDGGFTA 261 (272)
Q Consensus 251 ~~i~~dgG~~~ 261 (272)
|+|.+|||++.
T Consensus 240 ~~i~vDGG~ta 250 (251)
T d1zk4a1 240 SEFVVDGGYTA 250 (251)
T ss_dssp CEEEESTTGGG
T ss_pred cEEEECccccc
Confidence 99999999975
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1e-56 Score=374.21 Aligned_cols=242 Identities=32% Similarity=0.458 Sum_probs=219.7
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|+||++|||||++|||+++|+.|+++|++|++++|+++..+ ..+++ + ..++++|++|.++++++++++.+++
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~~~- 74 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI---G--GAFFQVDLEDERERVRFVEEAAYAL- 74 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH---T--CEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHhc-
Confidence 378999999999999999999999999999999999987643 33333 2 3457899999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||...+.++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||..+..+.++..+|++||+|
T Consensus 75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 154 (248)
T d2d1ya1 75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG 154 (248)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence 79999999999998999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
+++|+|++|+||+++|||||+|+||+++|+|....... .+.........|++++.+|+|+++++.||+++.+.|+|
T Consensus 155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~it 234 (248)
T d2d1ya1 155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT 234 (248)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence 99999999999999999999999999999998765332 23445567788999999999999999999999999999
Q ss_pred ccEEEeCCCcCCC
Q 024125 250 GQIISVDGGFTAN 262 (272)
Q Consensus 250 G~~i~~dgG~~~~ 262 (272)
||+|.+|||++..
T Consensus 235 G~~i~vDGG~tas 247 (248)
T d2d1ya1 235 GAILPVDGGMTAS 247 (248)
T ss_dssp SCEEEESTTGGGB
T ss_pred CcEEEcCcCcccc
Confidence 9999999999865
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=1.8e-57 Score=379.78 Aligned_cols=243 Identities=32% Similarity=0.424 Sum_probs=225.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++..+++|++++++++++++++.+++
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 77 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF- 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc-
Confidence 689999999999999999999999999999999999999888777665 4578899999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++..+|++||+|
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 157 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG 157 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCC-CHHHHHHHHHHHhcCCCCCccccE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVG-EPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
+.+|+|++|.|++++|||||+|+||+++|+|..+.... ..+......|+++++ .|+|+|+++.||+|+++.|+|||+
T Consensus 158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~--~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~ 235 (254)
T d1hdca_ 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR--QGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE 235 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC--CSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHH--HHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCce
Confidence 99999999999999999999999999999998765432 233344567899997 699999999999999999999999
Q ss_pred EEeCCCcCCC
Q 024125 253 ISVDGGFTAN 262 (272)
Q Consensus 253 i~~dgG~~~~ 262 (272)
|.+|||++.+
T Consensus 236 i~vDGG~t~g 245 (254)
T d1hdca_ 236 LAVDGGWTTG 245 (254)
T ss_dssp EEESTTTTTS
T ss_pred EEeCCCccCC
Confidence 9999999875
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=5.2e-57 Score=373.60 Aligned_cols=235 Identities=31% Similarity=0.494 Sum_probs=211.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+|+||++|||||++|||+++|++|+++|++|++++|+++.. .++..+++|++|+++++++++++.+++
T Consensus 3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 71 (237)
T d1uzma1 3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEHQ 71 (237)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999999999999987542 345678999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+|||+||..+..+.++..+|++||+
T Consensus 72 -g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 150 (237)
T d1uzma1 72 -GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA 150 (237)
T ss_dssp -SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred -CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHH
Confidence 7999999999999899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccE
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQI 252 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~ 252 (272)
|+++|+|+++.|++++|||||+|+||+++|+|.+.+ ++...+......|++++.+|||+|+++.||+++++.|+|||+
T Consensus 151 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~ 228 (237)
T d1uzma1 151 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAV 228 (237)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence 999999999999999999999999999999998876 345566778889999999999999999999999999999999
Q ss_pred EEeCCCcCC
Q 024125 253 ISVDGGFTA 261 (272)
Q Consensus 253 i~~dgG~~~ 261 (272)
|.+|||.+|
T Consensus 229 i~vdGG~~m 237 (237)
T d1uzma1 229 IPVDGGMGM 237 (237)
T ss_dssp EEESTTTTC
T ss_pred EEECCCCCC
Confidence 999999875
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=5.9e-57 Score=378.67 Aligned_cols=244 Identities=28% Similarity=0.448 Sum_probs=228.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++++.+.++..+.+|++++++++++++++.+++
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF- 80 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 5899999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred CCccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||... ..++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||..+..+.++..+|++||+
T Consensus 81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa 160 (260)
T d1zema1 81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG 160 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence 79999999999764 47899999999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-------------C-HHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-------------N-KEFVDKVIARTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~~~e~a~~~~ 238 (272)
|+++|+|++|.||+++|||||+|+||+++|+|...... . +...+.+....|++++++|+|+|+++.
T Consensus 161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~ 240 (260)
T d1zema1 161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 240 (260)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999998754321 1 234566677899999999999999999
Q ss_pred HHhcCCCCCccccEEEeCCC
Q 024125 239 YLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 239 ~l~~~~~~~~~G~~i~~dgG 258 (272)
||+|+.+.|+|||+|.+|||
T Consensus 241 fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 241 FLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp HHHSGGGTTCCSCEEEESCC
T ss_pred HHhCchhcCccCCeEEeCCC
Confidence 99999999999999999998
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-56 Score=371.79 Aligned_cols=240 Identities=31% Similarity=0.431 Sum_probs=223.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++. .+..+.+|++|++++++++++ +
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~----~ 72 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALGG----I 72 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTT----C
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHH----c
Confidence 57999999999999999999999999999999999999998888776653 466789999999998777654 5
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK-ASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||+....++.+.+.++|++.+++|+.+++.++++++|.|. ++..|+||++||..+..+.++..+|+++|
T Consensus 73 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK 151 (242)
T d1cyda_ 73 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK 151 (242)
T ss_dssp -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence 7999999999998889999999999999999999999999999999865 44568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+|+.+|+|+++.|++++|||||+|+||+++|+|......+++.........|++++.+|+|+++++.||+++++.|+|||
T Consensus 152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~ 231 (242)
T d1cyda_ 152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGG 231 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSS
T ss_pred HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCc
Confidence 99999999999999999999999999999999999888778888888899999999999999999999999999999999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
+|.+|||++.
T Consensus 232 ~i~vDGG~~a 241 (242)
T d1cyda_ 232 GILVDAGYLA 241 (242)
T ss_dssp EEEESTTGGG
T ss_pred eEEeCcchhc
Confidence 9999999875
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-56 Score=373.24 Aligned_cols=242 Identities=30% Similarity=0.442 Sum_probs=221.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++ .++.++.+|++|+++++++++++.+++
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~- 77 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF- 77 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc-
Confidence 589999999999999999999999999999999999999888877665 357788999999999999999999999
Q ss_pred CCccEEEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 94 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+++|++|||||.. ...++++.+.++|++++++|+.++++++++++|+|++++ |+||++||..+..+.++..+|++||+
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asKa 156 (250)
T d1ydea1 78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKG 156 (250)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHHh
Confidence 7999999999975 456778899999999999999999999999999998765 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
|+.+|+|++|.|++++|||||+|+||+++|+|....... .+...+.....|++++.+|+|+|+++.||+|+ +.|+
T Consensus 157 al~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~i 235 (250)
T d1ydea1 157 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFC 235 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTC
T ss_pred hHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCC
Confidence 999999999999999999999999999999998765432 23456666778999999999999999999996 7899
Q ss_pred cccEEEeCCCcCCC
Q 024125 249 TGQIISVDGGFTAN 262 (272)
Q Consensus 249 ~G~~i~~dgG~~~~ 262 (272)
|||+|.+|||++++
T Consensus 236 tG~~i~vDGG~~lG 249 (250)
T d1ydea1 236 TGIELLVTGGAELG 249 (250)
T ss_dssp CSCEEEESTTTTSC
T ss_pred cCCeEEECCCcccC
Confidence 99999999999985
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-56 Score=369.53 Aligned_cols=240 Identities=29% Similarity=0.426 Sum_probs=222.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+.|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++. .+..+.+|++|++++++++++ +
T Consensus 3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~----~ 74 (244)
T d1pr9a_ 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALGS----V 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTT----C
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHH----h
Confidence 46899999999999999999999999999999999999999888877653 466788999999998877754 5
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL-KASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.| ++++.|+||++||..+..+.++...|++||
T Consensus 75 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK 153 (244)
T d1pr9a_ 75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK 153 (244)
T ss_dssp -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhH
Confidence 799999999999999999999999999999999999999999999975 455679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+|+++|+|++|.||+++|||||+|+||+++|+|.+....+++.........|++++.+|+|+|+.+.||+|+.+.|+|||
T Consensus 154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~ 233 (244)
T d1pr9a_ 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGS 233 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCCc
Confidence 99999999999999999999999999999999998887777778888889999999999999999999999999999999
Q ss_pred EEEeCCCcCC
Q 024125 252 IISVDGGFTA 261 (272)
Q Consensus 252 ~i~~dgG~~~ 261 (272)
+|.+|||++.
T Consensus 234 ~i~vDGG~~A 243 (244)
T d1pr9a_ 234 TLPVEGGFWA 243 (244)
T ss_dssp EEEESTTGGG
T ss_pred EEEECccHhh
Confidence 9999999973
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=1.7e-55 Score=368.09 Aligned_cols=245 Identities=31% Similarity=0.367 Sum_probs=222.1
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++ +.+...+++|++++++++++++++.+++
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~- 78 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL- 78 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh-
Confidence 589999999999999999999999999999999999999999888776 4567888999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||+..+.++.+.+.++|++++++|+.++++++++++|+|++++ |+|||+||..+..+.++..+|++||+|
T Consensus 79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~~~~Y~asKaa 157 (253)
T d1hxha_ 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAA 157 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccccccccchhHH
Confidence 7999999999998889999999999999999999999999999999997654 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccC--CeeEEEeeCCcccChhhHhhhhCH---HHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 174 MNQLTRNLACEWAKD--NIRTNSVAPWYTKTSLVERLLENK---EFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 174 ~~~~~~~la~el~~~--~i~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
+.+|+|++|.|++++ +||||+|+||+++|+|.....+.. +.........|.+++.+|+|+|+++.||+|+++.|+
T Consensus 158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~i 237 (253)
T d1hxha_ 158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM 237 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCC
Confidence 999999999999874 599999999999999987655432 223223344577899999999999999999999999
Q ss_pred cccEEEeCCCcCCCC
Q 024125 249 TGQIISVDGGFTANG 263 (272)
Q Consensus 249 ~G~~i~~dgG~~~~~ 263 (272)
|||+|.+|||++--|
T Consensus 238 tG~~i~VDGG~~~~g 252 (253)
T d1hxha_ 238 SGSELHADNSILGMG 252 (253)
T ss_dssp CSCEEEESSSCTTTT
T ss_pred cCcEEEECccHhhCc
Confidence 999999999986443
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=9.5e-55 Score=366.92 Aligned_cols=248 Identities=27% Similarity=0.412 Sum_probs=221.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+ .+.++.+|++|+++++++++++.+++
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH- 80 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 5899999999999999999999999999999999999999999998886544 46778999999999999999999999
Q ss_pred CCccEEEECCCCCCCC--CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCC-hhhHHH
Q 024125 94 GKLNILVNNVGTNIRK--PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGAT 170 (272)
Q Consensus 94 ~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~-~~Y~~s 170 (272)
+++|++|||||..... .+.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||++||..+..+.++. ..|++|
T Consensus 81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as 160 (268)
T d2bgka1 81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT 160 (268)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence 7999999999985444 4778899999999999999999999999999999988999999999988766554 589999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-HHHHHHH--HhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-KEFVDKV--IARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
|+|+++|+|++|.||+++|||||+|+||+++|+|..+.... .+..+.. ....|.+++.+|+|+|+++.||+|+++.|
T Consensus 161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~ 240 (268)
T d2bgka1 161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY 240 (268)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCC
Confidence 99999999999999999999999999999999998765443 2222222 23457889999999999999999999999
Q ss_pred ccccEEEeCCCcCCCC
Q 024125 248 ITGQIISVDGGFTANG 263 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~ 263 (272)
+|||+|.+|||++...
T Consensus 241 itGq~i~VDGG~t~~~ 256 (268)
T d2bgka1 241 VSGLNLVIDGGYTRTN 256 (268)
T ss_dssp CCSCEEEESTTGGGCC
T ss_pred ccCceEEECcCcccCC
Confidence 9999999999998753
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=3.3e-55 Score=368.16 Aligned_cols=247 Identities=30% Similarity=0.455 Sum_probs=225.5
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.|+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++..+++|++++++++++++++.+
T Consensus 4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (260)
T d1h5qa_ 4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA 83 (260)
T ss_dssp EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999999888877754 477899999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecCCCCCC-------CCC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLS-------HVG 162 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS~~~~~-------~~~ 162 (272)
++ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+ +..++|++++|..... +.+
T Consensus 84 ~~-g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~ 162 (260)
T d1h5qa_ 84 DL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL 162 (260)
T ss_dssp HS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred Hh-CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCc
Confidence 99 79999999999998999999999999999999999999999999999854 4557888887765543 345
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+...|+++|+|+.+|+|++|.||+++|||||+|+||+++|++.... .++..+......|++++++|+|+|+++.||+|
T Consensus 163 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S 240 (260)
T d1h5qa_ 163 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLS 240 (260)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS
T ss_pred cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhc
Confidence 6789999999999999999999999999999999999999998765 45677778889999999999999999999999
Q ss_pred CCCCCccccEEEeCCCcCC
Q 024125 243 PAASYITGQIISVDGGFTA 261 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG~~~ 261 (272)
+.+.|+|||+|.+|||+++
T Consensus 241 ~~s~~itG~~i~VDGG~~~ 259 (260)
T d1h5qa_ 241 DHATYMTGGEYFIDGGQLI 259 (260)
T ss_dssp GGGTTCCSCEEEECTTGGG
T ss_pred chhCCCcCceEEECCCeec
Confidence 9999999999999999875
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=5.7e-55 Score=367.51 Aligned_cols=246 Identities=30% Similarity=0.444 Sum_probs=210.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++..+++|+++.++++++++++.+
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999988753 4689999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCC----CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCC-CCCCCCCCCh
Q 024125 91 KFNGKLNILVNNVGTNIRK----PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV-GGLSHVGSGS 165 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~-~~~~~~~~~~ 165 (272)
++ +++|++|||||...+. ++.+.+.++|++++++|+.+++.++++++|+|++++ |.+|+++|. ++..+.++..
T Consensus 82 ~~-g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~ 159 (264)
T d1spxa_ 82 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP 159 (264)
T ss_dssp HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred Hh-CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCch
Confidence 99 7999999999975433 455678899999999999999999999999998876 566666554 5678889999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-------HHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-------KEFVDKVIARTPLQRVGEPEEVASLVA 238 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~a~~~~ 238 (272)
.|++||+|+++|+|++|.||+++|||||+|+||+++|+|......+ ...........|++++++|+|+|+++.
T Consensus 160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~ 239 (264)
T d1spxa_ 160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA 239 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 9999999999999999999999999999999999999997654322 223445567799999999999999999
Q ss_pred HHhcC-CCCCccccEEEeCCCcCC
Q 024125 239 YLCLP-AASYITGQIISVDGGFTA 261 (272)
Q Consensus 239 ~l~~~-~~~~~~G~~i~~dgG~~~ 261 (272)
||+|+ .+.|+|||+|.+|||+++
T Consensus 240 fL~S~~~s~~itG~~i~vDGG~sl 263 (264)
T d1spxa_ 240 FLADRKTSSYIIGHQLVVDGGSSL 263 (264)
T ss_dssp HHHCHHHHTTCCSCEEEESTTGGG
T ss_pred HHhCCcccCCccCceEEeCCChhh
Confidence 99995 589999999999999986
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=7.1e-55 Score=368.36 Aligned_cols=248 Identities=29% Similarity=0.397 Sum_probs=219.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+.+ .++..+++|++++++++++++++.+
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999997653 4689999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCC----CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 91 KFNGKLNILVNNVGTNIRKPT----IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
++ +++|++|||||...+.++ .+.+.++|++++++|+.+++.++++++|+|++++.+.|+++||.++..+.++...
T Consensus 82 ~~-g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~ 160 (272)
T d1xkqa_ 82 QF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY 160 (272)
T ss_dssp HH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHH
T ss_pred Hh-CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcch
Confidence 99 799999999998766555 3567789999999999999999999999998876444444455677889999999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH-------HHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE-------FVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
|++||+|+.+|+|++|.||+++|||||+|+||+++|+|......... .........|++++++|+|+|+++.|
T Consensus 161 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~f 240 (272)
T d1xkqa_ 161 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF 240 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876654322 22333456799999999999999999
Q ss_pred HhcCC-CCCccccEEEeCCCcCCC
Q 024125 240 LCLPA-ASYITGQIISVDGGFTAN 262 (272)
Q Consensus 240 l~~~~-~~~~~G~~i~~dgG~~~~ 262 (272)
|+|++ +.|+|||+|.+|||+++.
T Consensus 241 L~S~~as~~iTG~~i~vDGG~~l~ 264 (272)
T d1xkqa_ 241 LADRNLSFYILGQSIVADGGTSLV 264 (272)
T ss_dssp HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HhCcchhCCccCeEEEeCcCHHHh
Confidence 99965 579999999999999886
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=1.2e-54 Score=367.12 Aligned_cols=248 Identities=29% Similarity=0.421 Sum_probs=223.2
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+.+ .++..+.+|++++++++++++++.+
T Consensus 1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 80 (274)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999998764 4689999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCC--CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 91 KFNGKLNILVNNVGTNIRK--PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
++ +++|++|||||..... ...+.+.++|++++++|+.+++.++|+++|+|++++.++|+++||..+..+.++...|+
T Consensus 81 ~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~ 159 (274)
T d1xhla_ 81 KF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYA 159 (274)
T ss_dssp HH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHH
T ss_pred Hc-CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceeh
Confidence 99 7999999999975443 44556889999999999999999999999999999889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHH-------HHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKE-------FVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
+||+|+.+|+|++|.|++++|||||+|+||+++|++......... .........|++++++|+|+|+++.||+
T Consensus 160 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~ 239 (274)
T d1xhla_ 160 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 239 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999876543321 2222335579999999999999999999
Q ss_pred cC-CCCCccccEEEeCCCcCCC
Q 024125 242 LP-AASYITGQIISVDGGFTAN 262 (272)
Q Consensus 242 ~~-~~~~~~G~~i~~dgG~~~~ 262 (272)
|+ .+.|+|||+|.+|||+++-
T Consensus 240 S~d~s~~itG~~i~vDGG~~l~ 261 (274)
T d1xhla_ 240 DRNLSSYIIGQSIVADGGSTLV 261 (274)
T ss_dssp CHHHHTTCCSCEEEESTTGGGC
T ss_pred CCccccCccCcEEEeCcCHHHh
Confidence 95 6899999999999999875
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-54 Score=368.61 Aligned_cols=248 Identities=35% Similarity=0.504 Sum_probs=227.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-----CCeEEEEEecCCCHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-----GFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
-.|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++..+.+|++|++++++++++
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~ 87 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 87 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence 3589999999999999999999999999999999999999999998888643 56899999999999999999999
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+.+++ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++|| .+..+.++...|
T Consensus 88 ~~~~~-G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y 165 (297)
T d1yxma1 88 TLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHS 165 (297)
T ss_dssp HHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHH
T ss_pred HHHHh-CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccc
Confidence 99999 6999999999998899999999999999999999999999999999999998899999866 455678889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN--KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
++||+|+.+|+|++|.||+++|||||+|+||+++|++....... ++..+......|++++++|+|+|+++.||+|+.+
T Consensus 166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s 245 (297)
T d1yxma1 166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA 245 (297)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999999999999999999999999999999997544322 3345556677899999999999999999999999
Q ss_pred CCccccEEEeCCCcCCC
Q 024125 246 SYITGQIISVDGGFTAN 262 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~ 262 (272)
.|+|||+|.+|||+++.
T Consensus 246 ~~iTG~~i~VDGG~sl~ 262 (297)
T d1yxma1 246 SFITGQSVDVDGGRSLY 262 (297)
T ss_dssp TTCCSCEEEESTTGGGC
T ss_pred cCcCCcEEEeCcChhhh
Confidence 99999999999999885
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=3.4e-54 Score=364.79 Aligned_cols=252 Identities=27% Similarity=0.392 Sum_probs=222.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.++..+.+|+++.++++++++++.+++
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999999999988877665 3578889999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCC-----CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 93 NGKLNILVNNVGTNIRKPT-----IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~-----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++|++|||||+...... .+.+.++|++++++|+.+++.++|+++|+|++++ |+||+++|..+..+.++...|
T Consensus 78 -g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y 155 (276)
T d1bdba_ 78 -GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLY 155 (276)
T ss_dssp -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHH
T ss_pred -CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchH
Confidence 799999999997544322 3444567999999999999999999999998765 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh--------hCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL--------ENKEFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
++||+|+.+|+|++|.||++. ||||+|+||+++|+|..... ...+..+......|++|+++|+|+++++.|
T Consensus 156 ~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~f 234 (276)
T d1bdba_ 156 TAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF 234 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 999999999999999999875 99999999999999854322 122345666778899999999999999999
Q ss_pred Hhc-CCCCCccccEEEeCCCcCCCCCCCCCCC
Q 024125 240 LCL-PAASYITGQIISVDGGFTANGFNPGIRL 270 (272)
Q Consensus 240 l~~-~~~~~~~G~~i~~dgG~~~~~~~~~~~~ 270 (272)
|++ +.+.|+|||+|.+|||++++|+..|...
T Consensus 235 L~S~~~a~~itG~~i~VDGG~~~~g~~~~~~~ 266 (276)
T d1bdba_ 235 FATRGDAAPATGALLNYDGGLGVRGFFSGAGG 266 (276)
T ss_dssp HHCHHHHTTCSSCEEEESSSGGGCCSSCSCSC
T ss_pred HcCCcccCCeeCcEEEECcChhhcceeCCCCC
Confidence 998 4689999999999999999988877654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=4.7e-54 Score=359.42 Aligned_cols=243 Identities=26% Similarity=0.318 Sum_probs=221.2
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.... +..+|+++.++++++++++.+++ +++|+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~-G~iDi 74 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAY-GQVDV 74 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHH-SCCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHc-CCCCE
Confidence 799999999999999999999999999999998888777654332 23589999999999999999999 79999
Q ss_pred EEECCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHH
Q 024125 99 LVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (272)
Q Consensus 99 li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 177 (272)
+|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++++.|+|||+||..+..+.++..+|++||+|+++|
T Consensus 75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l 154 (252)
T d1zmta1 75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL 154 (252)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence 99999975 45788999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCeeEEEeeCCcccChhhHhhh------hCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERLL------ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 178 ~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+|++|.||+++|||||+|+||+++|++..... ..++..+......|++|+++|+|+|+++.||+|+++.|+|||
T Consensus 155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~ 234 (252)
T d1zmta1 155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 234 (252)
T ss_dssp HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTC
T ss_pred HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence 99999999999999999999999999864432 245677778888999999999999999999999999999999
Q ss_pred EEEeCCCcCCCCCCCCC
Q 024125 252 IISVDGGFTANGFNPGI 268 (272)
Q Consensus 252 ~i~~dgG~~~~~~~~~~ 268 (272)
+|.+|||+++-+-++|.
T Consensus 235 ~i~vdGG~~~~~~~p~~ 251 (252)
T d1zmta1 235 VFWLAGGFPMIERWPGM 251 (252)
T ss_dssp EEEESTTCCCCCCCTTC
T ss_pred eEEECCCceeCCCCCcC
Confidence 99999999998777763
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.3e-53 Score=356.35 Aligned_cols=247 Identities=25% Similarity=0.283 Sum_probs=215.1
Q ss_pred CCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.+|+||++|||||+| |||+++|++|+++|++|++++|+++..++..+ +.....+...+++|++|+++++++++++.+
T Consensus 4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (256)
T d1ulua_ 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK-LAEALGGALLFRADVTQDEELDALFAGVKE 82 (256)
T ss_dssp ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH-hhhccCcccccccccCCHHHHHHHHHHHHH
Confidence 579999999999987 99999999999999999999998765555443 334445667789999999999999999999
Q ss_pred HcCCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 91 KFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
++ +++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+++ |+||++||..+..+.++...
T Consensus 83 ~~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~~~~~~~~~~ 159 (256)
T d1ulua_ 83 AF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKVVPKYNV 159 (256)
T ss_dssp HH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGGTSBCTTCHH
T ss_pred hc-CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHhcCCCCCchH
Confidence 99 79999999999753 3456778899999999999999999999999999764 89999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAAS 246 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~ 246 (272)
|++||+|+++|+|++|.||+++|||||+|+||+++|++.......++..+......|++++.+|+|+|+++.||+|+++.
T Consensus 160 Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~ 239 (256)
T d1ulua_ 160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLAS 239 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence 99999999999999999999999999999999999999887766677788888899999999999999999999999999
Q ss_pred CccccEEEeCCCcCCCC
Q 024125 247 YITGQIISVDGGFTANG 263 (272)
Q Consensus 247 ~~~G~~i~~dgG~~~~~ 263 (272)
|+|||+|.+|||+++-|
T Consensus 240 ~itG~~i~VDGG~~~~G 256 (256)
T d1ulua_ 240 GITGEVVYVDAGYHIMG 256 (256)
T ss_dssp TCCSCEEEESTTGGGBC
T ss_pred CccCCeEEECcCEeCcC
Confidence 99999999999999864
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=1.1e-52 Score=352.52 Aligned_cols=245 Identities=24% Similarity=0.409 Sum_probs=221.8
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++|+||++|||||++|||+++|+.|+++|++|+++ .|+++..++..+++++.+.++..+++|++|+++++++++++.++
T Consensus 2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 45999999999999999999999999999999886 56667788889999988889999999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCC-CCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~-~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|+++ +++++++|..+ ..+.++...|+++
T Consensus 82 ~-g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~as 158 (259)
T d1ja9a_ 82 F-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGS 158 (259)
T ss_dssp H-SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHH
T ss_pred c-CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHH
Confidence 9 689999999999999999999999999999999999999999999999765 57777766655 4468899999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-----------HHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-----------KEFVDKVIARTPLQRVGEPEEVASLVAY 239 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~e~a~~~~~ 239 (272)
|+|+++|+|++|.|++++|||||+|+||+++|+|....... .+..+......|++++++|+|+++++.|
T Consensus 159 K~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~f 238 (259)
T d1ja9a_ 159 KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSA 238 (259)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999998654211 2345666788999999999999999999
Q ss_pred HhcCCCCCccccEEEeCCCcC
Q 024125 240 LCLPAASYITGQIISVDGGFT 260 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~ 260 (272)
|+++.+.|+||++|.+|||+.
T Consensus 239 L~S~~a~~itG~~i~vDGG~~ 259 (259)
T d1ja9a_ 239 LCQEESEWINGQVIKLTGGGI 259 (259)
T ss_dssp HHSGGGTTCCSCEEEESTTCC
T ss_pred HhCchhcCCcCceEEeCCCCC
Confidence 999999999999999999974
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=3e-53 Score=352.02 Aligned_cols=239 Identities=28% Similarity=0.400 Sum_probs=213.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.|+||++|||||++|||+++|++|+++|++|++++|+.+++++..++ .+.++.++++|++++++++++++++.+++
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~i~~~~~~i~~~~- 77 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVADVSDPKAVEAVFAEALEEF- 77 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CCSSEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---cCCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 47899999999999999999999999999999999999887766544 45678889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+++|++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|+++ +.|+++||.+ ..+.++...|+++|+|
T Consensus 78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~a-~~~~~~~~~Y~~sK~a 154 (241)
T d2a4ka1 78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSVA-GLGAFGLAHYAAGKLG 154 (241)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCCT-TCCHHHHHHHHHCSSH
T ss_pred CCccEeccccccccccchhhhhccccccccccccccccccccccccccccc--cceeeccccc-cccccCccccchhhHH
Confidence 799999999999889999999999999999999999999999999988654 4566665554 4555788999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEE
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQII 253 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i 253 (272)
+++|+|++|+||+++|||||+|+||+++|+|.... .++...+.....|++++.+|+|+|+++.||+|+.+.|+||++|
T Consensus 155 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i 232 (241)
T d2a4ka1 155 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQAL 232 (241)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh--hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceE
Confidence 99999999999999999999999999999998755 3456777788899999999999999999999999999999999
Q ss_pred EeCCCcCC
Q 024125 254 SVDGGFTA 261 (272)
Q Consensus 254 ~~dgG~~~ 261 (272)
.+|||+++
T Consensus 233 ~vDGG~s~ 240 (241)
T d2a4ka1 233 YVDGGRSI 240 (241)
T ss_dssp EESTTTTT
T ss_pred EeCCCccc
Confidence 99999986
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=4.4e-52 Score=351.39 Aligned_cols=248 Identities=26% Similarity=0.423 Sum_probs=222.8
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.+.+|+||++|||||++|||++++++|+++|++|++++|+ ++.++++.+++++.+.++..+.+|++|+++++++++++.
T Consensus 12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 91 (272)
T d1g0oa_ 12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV 91 (272)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence 3456999999999999999999999999999999999876 667788888888888899999999999999999999999
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhH
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYG 168 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~ 168 (272)
+.+ +++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|+|.++ +++++++|..+. .+.++...|+
T Consensus 92 ~~~-g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~~Y~ 168 (272)
T d1g0oa_ 92 KIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYS 168 (272)
T ss_dssp HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCHHHH
T ss_pred HHh-CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccccccchhhHH
Confidence 999 799999999999999999999999999999999999999999999999765 688888887654 4577778899
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---------HHH--HHHHHhcCCCCCCCCHHHHHHHH
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---------KEF--VDKVIARTPLQRVGEPEEVASLV 237 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~e~a~~~ 237 (272)
++|+|+++|+|++|.||+++|||||+|+||+++|+|....... .+. ........|++++.+|+|+|+++
T Consensus 169 asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v 248 (272)
T d1g0oa_ 169 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV 248 (272)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999998665332 111 22345678999999999999999
Q ss_pred HHHhcCCCCCccccEEEeCCCcCC
Q 024125 238 AYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
.||+++.+.|+||++|.+|||++|
T Consensus 249 ~fL~s~~s~~itG~~i~vDGG~~m 272 (272)
T d1g0oa_ 249 CFLASNDGGWVTGKVIGIDGGACM 272 (272)
T ss_dssp HHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHhCchhcCccCceEeECCCCCC
Confidence 999999999999999999999875
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.2e-52 Score=345.55 Aligned_cols=230 Identities=33% Similarity=0.493 Sum_probs=208.5
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
|+||++|||||++|||+++|+.|+++|++|++++|+++.+++. +. .++.+|+++. ++.+.+++ +
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~~--~~~~~Dv~~~------~~~~~~~~-g 65 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------GH--RYVVCDLRKD------LDLLFEKV-K 65 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------CS--EEEECCTTTC------HHHHHHHS-C
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------CC--cEEEcchHHH------HHHHHHHh-C
Confidence 7899999999999999999999999999999999998765432 22 3467999864 34455566 7
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||+++|..+..+.++...|++||+|+
T Consensus 66 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal 145 (234)
T d1o5ia_ 66 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL 145 (234)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence 99999999999888899999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 175 ~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
.+|+|++|.||+++|||||+|+||+++|++...... ++..+......|++++.+|+|+|+++.||+|+++.|+|||+|.
T Consensus 146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~ 224 (234)
T d1o5ia_ 146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS-EEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIV 224 (234)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC-HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEE
Confidence 999999999999999999999999999999877653 4556777888999999999999999999999999999999999
Q ss_pred eCCCcCC
Q 024125 255 VDGGFTA 261 (272)
Q Consensus 255 ~dgG~~~ 261 (272)
+|||++.
T Consensus 225 vDGG~s~ 231 (234)
T d1o5ia_ 225 VDGGLSK 231 (234)
T ss_dssp ESTTCCC
T ss_pred ECccccc
Confidence 9999874
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-53 Score=351.95 Aligned_cols=240 Identities=26% Similarity=0.346 Sum_probs=214.7
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+. +.++.++.+|++++++++++++++.+++
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999999999999999888654 4688999999999999999999999999
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCeEEEecCCCCCCCCCCChhhHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIYGA 169 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~ii~vsS~~~~~~~~~~~~Y~~ 169 (272)
+++|++|||||.... ++|++++++|+.+++.+++.++|+|.+++ .|+||++||..+..+.++..+|++
T Consensus 81 -G~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a 151 (254)
T d2gdza1 81 -GRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA 151 (254)
T ss_dssp -SCCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred -CCcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence 799999999998432 45889999999999999999999998764 378999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHccCCeeEEEeeCCcccChhhHhhhhC------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 170 TKAAMNQLTRN--LACEWAKDNIRTNSVAPWYTKTSLVERLLEN------KEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 170 sK~a~~~~~~~--la~el~~~~i~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
||+|+.+|+|+ |+.||+++|||||+|+||+++|+|....... .+..+.+....|++++.+|+|+|++++||+
T Consensus 152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~ 231 (254)
T d2gdza1 152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 231 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 99999999997 6889999999999999999999998765432 123455566778899999999999999999
Q ss_pred cCCCCCccccEEEeCCCcCCCCCC
Q 024125 242 LPAASYITGQIISVDGGFTANGFN 265 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~~~~~ 265 (272)
++ +++||++|.||||+.++..|
T Consensus 232 s~--~~itG~~i~VdGG~~~~~~~ 253 (254)
T d2gdza1 232 ED--DALNGAIMKITTSKGIHFQD 253 (254)
T ss_dssp HC--TTCSSCEEEEETTTEEEECC
T ss_pred cC--CCCCCCEEEECCCCeeeccc
Confidence 86 45999999999999887644
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-52 Score=345.78 Aligned_cols=237 Identities=27% Similarity=0.406 Sum_probs=212.0
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
|+||++|||||++|||+++++.|+++|++|++++|++++++++.++ ..+....+|+.+.+.++...+ .+ +
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~-----~~~~~~~~d~~~~~~~~~~~~----~~-~ 73 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-----PGIQTRVLDVTKKKQIDQFAN----EV-E 73 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS-----TTEEEEECCTTCHHHHHHHHH----HC-S
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-----cCCceeeeecccccccccccc----cc-c
Confidence 8999999999999999999999999999999999999877655432 346678889988776665554 44 6
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAA 173 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~~sK~a 173 (272)
++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+. .+.+....|+++|+|
T Consensus 74 ~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaa 153 (245)
T d2ag5a1 74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAA 153 (245)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHH
T ss_pred cceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHH
Confidence 8999999999998899999999999999999999999999999999999988999999998774 577888999999999
Q ss_pred HHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 174 ~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
+++|+|++|.|++++|||||+|+||+++|++....... ...........|++++.+|+|+++++.||+++++.|+|
T Consensus 154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iT 233 (245)
T d2ag5a1 154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233 (245)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCc
Confidence 99999999999999999999999999999998754331 23456667889999999999999999999999999999
Q ss_pred ccEEEeCCCcCC
Q 024125 250 GQIISVDGGFTA 261 (272)
Q Consensus 250 G~~i~~dgG~~~ 261 (272)
||+|.+|||++|
T Consensus 234 G~~i~VDGG~sl 245 (245)
T d2ag5a1 234 GNPVIIDGGWSL 245 (245)
T ss_dssp SCEEEECTTGGG
T ss_pred CceEEeCCCcCC
Confidence 999999999986
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=1.8e-51 Score=340.91 Aligned_cols=230 Identities=24% Similarity=0.340 Sum_probs=213.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCE-------EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAV-------VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~-------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
++||||||++|||+++|++|+++|++ |++++|+.++++++.+++++.+.++..+.+|++|+++++++++++.+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999997 99999999999999999998888999999999999999999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
++ +++|++|||||.....++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus 82 ~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as 160 (240)
T d2bd0a1 82 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS 160 (240)
T ss_dssp HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred Hc-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence 99 79999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
|+|+.+|+|+++.|++++|||||+|+||+++|+|....... ...++.+|+|+|+.++||+++.+.+++|
T Consensus 161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-----------~~~~~~~PedvA~~v~~l~s~~~~~~~~ 229 (240)
T d2bd0a1 161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-----------MQALMMMPEDIAAPVVQAYLQPSRTVVE 229 (240)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-----------TGGGSBCHHHHHHHHHHHHTSCTTEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-----------hHhcCCCHHHHHHHHHHHHcCCccCccC
Confidence 99999999999999999999999999999999997654321 1235678999999999999988888888
Q ss_pred c-EEEeCCCc
Q 024125 251 Q-IISVDGGF 259 (272)
Q Consensus 251 ~-~i~~dgG~ 259 (272)
+ .+..+||-
T Consensus 230 ~~~i~p~~G~ 239 (240)
T d2bd0a1 230 EIILRPTSGD 239 (240)
T ss_dssp EEEEEETTCC
T ss_pred CEEEEecCCC
Confidence 7 55678773
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=338.69 Aligned_cols=242 Identities=25% Similarity=0.324 Sum_probs=216.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC--CeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++++.+ .++..++||++++++++++++++.++
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~ 86 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 86 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 4899999999999999999999999999999999999999999999998764 58889999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCeEEEecCCCCCCC--CCCChhh
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSH--VGSGSIY 167 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~ii~vsS~~~~~~--~~~~~~Y 167 (272)
+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+... .+....|
T Consensus 87 ~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y 165 (257)
T d1xg5a_ 87 H-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY 165 (257)
T ss_dssp H-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred c-CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHH
Confidence 9 7999999999999999999999999999999999999999999999998764 589999999988654 4456779
Q ss_pred HHHHHHHHHHHHHHHHHH--ccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC
Q 024125 168 GATKAAMNQLTRNLACEW--AKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el--~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~ 245 (272)
+++|+|+.+|+|+|+.|| .++||+||+|+||+++|++....... ..+......|.+++.+|+|+|+++.||+++.+
T Consensus 166 ~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~--~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 166 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK--DPEKAAATYEQMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT--CHHHHHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh--hHHHHHhcCCCCCCcCHHHHHHHHHHHhCChh
Confidence 999999999999999998 78899999999999999998776432 23445566799999999999999999999999
Q ss_pred CCccccEEEeCCC
Q 024125 246 SYITGQIISVDGG 258 (272)
Q Consensus 246 ~~~~G~~i~~dgG 258 (272)
.|+|||++..++|
T Consensus 244 ~~itG~i~i~~~g 256 (257)
T d1xg5a_ 244 HIQIGDIQMRPTG 256 (257)
T ss_dssp TEEEEEEEEEETT
T ss_pred cCeECCEEEEeCC
Confidence 9999997544444
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=3.3e-50 Score=343.61 Aligned_cols=249 Identities=29% Similarity=0.398 Sum_probs=223.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++..+.+|+++.++++++++.+.++
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 100 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 100 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence 6899999999999999999999999999999999999999999988887643 678889999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+ +++|++|||||.....++.+.+.+++++.+.+|+.+.+.+.+...+.+... ..+.+++++|..+..+.++..+|++|
T Consensus 101 ~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysas 179 (294)
T d1w6ua_ 101 A-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASA 179 (294)
T ss_dssp T-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred c-cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHH
Confidence 9 799999999999888899999999999999999999999998887777654 55678888998888888999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcc
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYIT 249 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~ 249 (272)
|+|+++|+|++|.||+++|||||+|+||+++|++...... .+..........|++++++|+|+|+++.||+++.+.|+|
T Consensus 180 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~it 259 (294)
T d1w6ua_ 180 KAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWIN 259 (294)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCCC
Confidence 9999999999999999999999999999999999876543 345677788889999999999999999999999999999
Q ss_pred ccEEEeCCCcCCC
Q 024125 250 GQIISVDGGFTAN 262 (272)
Q Consensus 250 G~~i~~dgG~~~~ 262 (272)
|++|.+|||+++-
T Consensus 260 G~~i~vDGG~~l~ 272 (294)
T d1w6ua_ 260 GAVIKFDGGEEVL 272 (294)
T ss_dssp SCEEEESTTHHHH
T ss_pred CcEEEECCChhhe
Confidence 9999999997643
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-50 Score=346.45 Aligned_cols=235 Identities=25% Similarity=0.381 Sum_probs=209.2
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC---------ChHHHHHHHHHHHhCCCeEEEEEecCCCHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR---------NEVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 81 (272)
|+|+|+||++|||||++|||+++|++|+++|++|++++| +.+.+++..+++...... ..+|+++.+++
T Consensus 1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~ 77 (302)
T d1gz6a_ 1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAG 77 (302)
T ss_dssp CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGH
T ss_pred CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccc---cccccchHHHH
Confidence 578999999999999999999999999999999999865 456677777777765544 45788888999
Q ss_pred HHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC
Q 024125 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV 161 (272)
Q Consensus 82 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~ 161 (272)
+++++++.+++ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+|||+||..+..+.
T Consensus 78 ~~~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~ 156 (302)
T d1gz6a_ 78 EKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN 156 (302)
T ss_dssp HHHHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHc-CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC
Confidence 99999999999 79999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
++...|++||+|+.+|+++++.|++++|||||+|+||++.|.+..... .+.. +..+|+|+|++++||+
T Consensus 157 ~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~--~~~~----------~~~~PedvA~~v~fL~ 224 (302)
T d1gz6a_ 157 FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP--EDLV----------EALKPEYVAPLVLWLC 224 (302)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC--HHHH----------HHSCGGGTHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc--HhhH----------hcCCHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999887755432 2211 2347999999999999
Q ss_pred cCCCCCccccEEEeCCCcCCC
Q 024125 242 LPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 242 ~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++.+ ++||++|.+|||+.-.
T Consensus 225 S~~a-~itG~~i~vdGG~~~~ 244 (302)
T d1gz6a_ 225 HESC-EENGGLFEVGAGWIGK 244 (302)
T ss_dssp STTC-CCCSCEEEEETTEEEE
T ss_pred CCCc-CCCCcEEEeCCCceeE
Confidence 9764 7999999999997654
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=1.2e-48 Score=326.55 Aligned_cols=238 Identities=18% Similarity=0.177 Sum_probs=199.7
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-CCeEEEEEecCC-CHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAA-SPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~-~~~~~~~~~~~~~~ 90 (272)
|+|+||+||||||++|||+++|++|+++|++|++++|+.++.++..+..... +.++.++.+|++ +.++++++++++.+
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999988777666555444333 558999999998 67889999999999
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC---CCCeEEEecCCCCCCCCCCChhh
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS---GVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
++ +++|+||||||.. +.++|++++++|+.|+++++++++|+|.++ ..|+||++||..+..+.++...|
T Consensus 81 ~~-g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y 151 (254)
T d1sbya1 81 QL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY 151 (254)
T ss_dssp HH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred Hc-CCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence 99 6999999999963 456789999999999999999999999765 35899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+.+|+++|+.||.++|||||+|+||+++|+|.+......+............+..+||++|+.++++.+ .+
T Consensus 152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~---~~ 228 (254)
T d1sbya1 152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE---AN 228 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH---HC
T ss_pred HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhh---CC
Confidence 999999999999999999999999999999999999987654332222222222233445689999999887774 33
Q ss_pred ccccEEEeCCCcCCC
Q 024125 248 ITGQIISVDGGFTAN 262 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~ 262 (272)
.||++|.+|||++..
T Consensus 229 ~tG~vi~vdgG~l~~ 243 (254)
T d1sbya1 229 KNGAIWKLDLGTLEA 243 (254)
T ss_dssp CTTCEEEEETTEEEE
T ss_pred CCCCEEEECCCEeCc
Confidence 599999999996433
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-47 Score=321.07 Aligned_cols=239 Identities=21% Similarity=0.198 Sum_probs=212.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHH---CCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAG---LGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~---~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
.|+||++|||||++|||+++|++|++ +|++|++++|++++++++.+++... +.++..+++|++++++++++++.+
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~ 82 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 58999999999999999999999986 7999999999999999999998754 568999999999999999999988
Q ss_pred HHHc---CCCccEEEECCCCC---CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCeEEEecCCCCCCC
Q 024125 89 GSKF---NGKLNILVNNVGTN---IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSH 160 (272)
Q Consensus 89 ~~~~---~~~id~li~~ag~~---~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~ii~vsS~~~~~~ 160 (272)
.+.. ++.+|++|||||.. ..+++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+
T Consensus 83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~ 162 (259)
T d1oaaa_ 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence 7632 24789999999974 345678899999999999999999999999999998875 479999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh---hCHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL---ENKEFVDKVIARTPLQRVGEPEEVASLV 237 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e~a~~~ 237 (272)
.++...|++||+|+++|+|+|+.| ++|||||+|+||+++|+|..... .+++....+....+.+++.+|+|+|+.+
T Consensus 163 ~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i 240 (259)
T d1oaaa_ 163 YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999999999999999999999999 67999999999999999986543 2355666666777889999999999999
Q ss_pred HHHhcCCCCCccccEEEe
Q 024125 238 AYLCLPAASYITGQIISV 255 (272)
Q Consensus 238 ~~l~~~~~~~~~G~~i~~ 255 (272)
++|+++ ..|+||++|++
T Consensus 241 ~~ll~~-~s~~TG~~idv 257 (259)
T d1oaaa_ 241 LGLLQK-DTFQSGAHVDF 257 (259)
T ss_dssp HHHHHH-CCSCTTEEEET
T ss_pred HHHhhh-ccCCCCCeEEe
Confidence 999985 56999999986
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-48 Score=319.06 Aligned_cols=219 Identities=24% Similarity=0.294 Sum_probs=201.6
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+.+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++..+.||++|.++++++++++.++
T Consensus 2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+ +++|++|||||.....++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||..+..+.++.++|++||
T Consensus 82 ~-g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK 160 (244)
T d1yb1a_ 82 I-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK 160 (244)
T ss_dssp T-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred c-CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence 9 689999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcc---CCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 172 AAMNQLTRNLACEWAK---DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 172 ~a~~~~~~~la~el~~---~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
+|+.+|+++|+.|+++ +||+|++|+||+++|+|.+... . +.....+|+++++.+...+..
T Consensus 161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~---~---------~~~~~~~pe~va~~i~~~~~~ 223 (244)
T d1yb1a_ 161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS---T---------SLGPTLEPEEVVNRLMHGILT 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH---H---------HHCCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC---c---------cccCCCCHHHHHHHHHHHHhc
Confidence 9999999999999976 5899999999999999875421 1 123456899999999876643
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.7e-47 Score=319.55 Aligned_cols=247 Identities=20% Similarity=0.293 Sum_probs=218.0
Q ss_pred CCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|+||++|||||+| |||+++|+.|+++|++|++++|+++..+... ++............|+++..++.+.++++.+.+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVE-EFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 81 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHH-HHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence 7899999999999 8999999999999999999999876555444 444444456677899999999999999999998
Q ss_pred CCCccEEEECCCCCCCCCC-----CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhh
Q 024125 93 NGKLNILVNNVGTNIRKPT-----IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~-----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y 167 (272)
+++|++||||+......+ .....+.|...+++|+.+.+.+++++.|.|++. +.|+++||..+..+.++...|
T Consensus 82 -~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Ii~iss~~~~~~~~~~~~Y 158 (258)
T d1qsga_ 82 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SALLTLSYLGAERAIPNYNVM 158 (258)
T ss_dssp -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSBCTTTTHH
T ss_pred -cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEecchhhccCCCCcHHH
Confidence 799999999987544433 245667799999999999999999999988543 689999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 024125 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASY 247 (272)
Q Consensus 168 ~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~ 247 (272)
++||+|+++|+|++|+||+++|||||+|+||+++|++...........+......|++++.+|||+++++.||+++.+.|
T Consensus 159 ~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~ 238 (258)
T d1qsga_ 159 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG 238 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 99999999999999999999999999999999999998876555666777788899999999999999999999999999
Q ss_pred ccccEEEeCCCcCCCCCC
Q 024125 248 ITGQIISVDGGFTANGFN 265 (272)
Q Consensus 248 ~~G~~i~~dgG~~~~~~~ 265 (272)
+||++|.+|||+++.|+.
T Consensus 239 itG~~i~vDGG~~i~g~~ 256 (258)
T d1qsga_ 239 ISGEVVHVDGGFSIAAMN 256 (258)
T ss_dssp CCSCEEEESTTGGGBCSC
T ss_pred ccCceEEECcCHHHhcCC
Confidence 999999999999999874
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-46 Score=309.69 Aligned_cols=234 Identities=24% Similarity=0.373 Sum_probs=202.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++. .......+|+.+.+.++...+++...+
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG---NNCVFAPADVTSEKDVQTALALAKGKF- 77 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---CCccccccccccccccccccccccccc-
Confidence 6899999999999999999999999999999999999999888877763 467788999999999999999999888
Q ss_pred CCccEEEECCCCCCCC------CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCeEEEecCCCCCCCC
Q 024125 94 GKLNILVNNVGTNIRK------PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISSVGGLSHV 161 (272)
Q Consensus 94 ~~id~li~~ag~~~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~ii~vsS~~~~~~~ 161 (272)
..+|.+++++++.... ++.+.+.++|++++++|+.+++++++++.|+|..+ +.|+||++||..+..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~ 157 (248)
T d2o23a1 78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 157 (248)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence 6899999998764433 44567889999999999999999999999998654 45899999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLVAYL 240 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~a~~~~~l 240 (272)
++..+|++||+|+++|+|+++.|++++|||||+|+||+++|+|..... .+..+......|+ +++++|+|+|+++.||
T Consensus 158 ~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~--~~~~~~~~~~~pl~~R~g~peevA~~v~fL 235 (248)
T d2o23a1 158 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP--EKVCNFLASQVPFPSRLGDPAEYAHLVQAI 235 (248)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC--HHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987653 2344556667776 8999999999999999
Q ss_pred hcCCCCCccccEEEe
Q 024125 241 CLPAASYITGQIISV 255 (272)
Q Consensus 241 ~~~~~~~~~G~~i~~ 255 (272)
++ ++|+|||+|+|
T Consensus 236 ~s--~~~itGq~I~v 248 (248)
T d2o23a1 236 IE--NPFLNGEVIRL 248 (248)
T ss_dssp HH--CTTCCSCEEEE
T ss_pred Hh--CCCCCceEeEC
Confidence 96 58999999986
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=4.8e-45 Score=309.74 Aligned_cols=240 Identities=24% Similarity=0.302 Sum_probs=200.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhC-CCeEEE-----------------EEecCCCH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSK-GFVVSG-----------------SVCDAASP 78 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~-----------------~~~D~~~~ 78 (272)
-++|||||++|||+++|++|+++|++|++++| +++..+++.+++... +..... ..+|+++.
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 37899999999999999999999999998765 566677777777643 333333 35669999
Q ss_pred HHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHH--------------HHHHHHhHHHHHHHHHHHHHHH--
Q 024125 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS--------------KIMTTNFESTYHLCQLVYPLLK-- 142 (272)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~--------------~~~~~N~~~~~~l~~~~~~~~~-- 142 (272)
++++++++++.+++ +++|++|||||...+.++.+.+.++|+ ..+.+|+.+++.+.+.+.+.+.
T Consensus 83 ~~v~~~~~~~~~~~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 83 TRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHh-CCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 99999999999999 799999999999888887776665544 4789999999999999888753
Q ss_pred ----cCCCCeEEEecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHH
Q 024125 143 ----ASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKV 218 (272)
Q Consensus 143 ----~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~ 218 (272)
+.+.++|++++|.....+.++..+|++||+|+++|+|++|+||+++|||||+|+||++.+... . .++..+..
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~--~--~~~~~~~~ 237 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD--M--PPAVWEGH 237 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG--S--CHHHHHHH
T ss_pred HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc--C--CHHHHHHH
Confidence 344578999999999999999999999999999999999999999999999999998665432 1 34566677
Q ss_pred HhcCCC-CCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 219 IARTPL-QRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 219 ~~~~~~-~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
....|+ +++.+|+|+++++.||+++++.|+|||+|.+|||+++.
T Consensus 238 ~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 238 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp HTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 777885 89999999999999999999999999999999999875
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=4.1e-45 Score=316.34 Aligned_cols=245 Identities=20% Similarity=0.209 Sum_probs=203.6
Q ss_pred CCCEEEEeC--CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC------------CCeEEEEE---------
Q 024125 16 KGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK------------GFVVSGSV--------- 72 (272)
Q Consensus 16 ~~k~vlItG--a~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~--------- 72 (272)
.+|++|||| +++|||+++|+.|+++|++|+++++............... ........
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 379999999 5589999999999999999999998876655444332211 01112222
Q ss_pred -----------ecCCCHHHHHHHHHHHHHHcCCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Q 024125 73 -----------CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139 (272)
Q Consensus 73 -----------~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (272)
+|+++.++++++++++.+.+ +++|++|||||... ..++.+.+.++|++.+++|+++++.++|+++|
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~ 159 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHh-CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence 36678888999999999999 79999999999754 35788899999999999999999999999999
Q ss_pred HHHcCCCCeEEEecCCCCCCCCCC-ChhhHHHHHHHHHHHHHHHHHHcc-CCeeEEEeeCCcccChhhHhh---------
Q 024125 140 LLKASGVGSIVFISSVGGLSHVGS-GSIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVERL--------- 208 (272)
Q Consensus 140 ~~~~~~~g~ii~vsS~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~el~~-~~i~v~~v~PG~v~t~~~~~~--------- 208 (272)
+|+++ |+||++||..+..+.|+ ...|+++|+|+++|+|++|.||++ +|||||+|+||+++|+..+.+
T Consensus 160 ~m~~~--GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~ 237 (329)
T d1uh5a_ 160 IMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN 237 (329)
T ss_dssp GEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred hcccc--cccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence 99654 89999999998888776 567999999999999999999986 699999999999999543221
Q ss_pred ----------------------------------hhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEE
Q 024125 209 ----------------------------------LENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIIS 254 (272)
Q Consensus 209 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~ 254 (272)
...+...+......|++++.+|+|+|++++||+|+.+.|+|||+|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~ 317 (329)
T d1uh5a_ 238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY 317 (329)
T ss_dssp ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEE
Confidence 1113456667778999999999999999999999999999999999
Q ss_pred eCCCcCCCC
Q 024125 255 VDGGFTANG 263 (272)
Q Consensus 255 ~dgG~~~~~ 263 (272)
+|||+++-+
T Consensus 318 VDGG~~~~g 326 (329)
T d1uh5a_ 318 VDNGLNIMF 326 (329)
T ss_dssp ESTTGGGCS
T ss_pred ECCCccccc
Confidence 999998765
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=6.7e-45 Score=310.80 Aligned_cols=250 Identities=25% Similarity=0.291 Sum_probs=205.0
Q ss_pred CCCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC---------C---CeEEEEEec---
Q 024125 12 RWSLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK---------G---FVVSGSVCD--- 74 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~D--- 74 (272)
+++|+||++|||||+| |||+++|+.|+++|++|++++|+.............. . ..-....+|
T Consensus 3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T d1d7oa_ 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence 5789999999999876 9999999999999999999999765544333222111 0 011222333
Q ss_pred -----------------CCCHHHHHHHHHHHHHHcCCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHH
Q 024125 75 -----------------AASPDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQ 135 (272)
Q Consensus 75 -----------------~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 135 (272)
.++..+++++++++.+++ +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++
T Consensus 83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~-G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~ 161 (297)
T d1d7oa_ 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHh-CCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence 345566788999999999 79999999999743 4678899999999999999999999999
Q ss_pred HHHHHHHcCCCCeEEEecCCCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHc-cCCeeEEEeeCCcccChhhHhhhhCHH
Q 024125 136 LVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWA-KDNIRTNSVAPWYTKTSLVERLLENKE 213 (272)
Q Consensus 136 ~~~~~~~~~~~g~ii~vsS~~~~-~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~i~v~~v~PG~v~t~~~~~~~~~~~ 213 (272)
+++|.|.++ +.++++++.... ...+....|+++|+++.++++.++.+++ ++|||||+|+||+++|++.......++
T Consensus 162 ~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~ 239 (297)
T d1d7oa_ 162 HFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT 239 (297)
T ss_dssp HHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHH
T ss_pred HHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHH
Confidence 999988765 455665555443 3456777899999999999999999996 579999999999999999876544456
Q ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCCCC
Q 024125 214 FVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANGF 264 (272)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~~~ 264 (272)
..+......|++++.+|+|+|+++.||+|+.+.|+|||+|.+|||+++.|+
T Consensus 240 ~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~ 290 (297)
T d1d7oa_ 240 MIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGV 290 (297)
T ss_dssp HHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCC
Confidence 677788889999999999999999999999999999999999999998765
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-45 Score=310.41 Aligned_cols=234 Identities=20% Similarity=0.238 Sum_probs=191.2
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEE---EeeCChHHH---HHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVH---TCSRNEVEL---NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~---~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
.|+||||||++|||+++|+.|+++|++|+ .+.|+.+.. ++..+++...+.++..+.+|++|.++++++++++.+
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 47899999999999999999999998644 455654443 444444555577899999999999999999988743
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
+++|+++||||.....++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus 82 ---g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~as 158 (285)
T d1jtva_ 82 ---GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCAS 158 (285)
T ss_dssp ---SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred ---cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHH
Confidence 68999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHH---------HHHH------HhcCCCCCCCCHHHHHH
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEF---------VDKV------IARTPLQRVGEPEEVAS 235 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~---------~~~~------~~~~~~~~~~~~~e~a~ 235 (272)
|+|+.+|+++|+.||+++||+||+|+||+++|+|.......++. ..++ ....+.++..+|+|+|+
T Consensus 159 Kaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~ 238 (285)
T d1jtva_ 159 KFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238 (285)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHH
Confidence 99999999999999999999999999999999998765433211 1111 11234456779999999
Q ss_pred HHHHHhcCC---CCCccccEE
Q 024125 236 LVAYLCLPA---ASYITGQII 253 (272)
Q Consensus 236 ~~~~l~~~~---~~~~~G~~i 253 (272)
.+++++... ..|++|+.+
T Consensus 239 ~v~~~~~~~~p~~ry~~g~~~ 259 (285)
T d1jtva_ 239 VFLTALRAPKPTLRYFTTERF 259 (285)
T ss_dssp HHHHHHHCSSCCSEEESCSTT
T ss_pred HHHHHHhCCCCCeEEecHHHH
Confidence 999999643 457777643
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=2.4e-44 Score=304.01 Aligned_cols=250 Identities=22% Similarity=0.272 Sum_probs=207.2
Q ss_pred CCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa~~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|+||++|||||+| |||+++|++|+++|++|++++|+++ +++..+++.+.+....+..+|+++.++++++++++.+.+
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 81 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence 7899999999765 9999999999999999999999864 444455555556677778999999999999999999999
Q ss_pred CCCccEEEECCCCCCCC----CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhH
Q 024125 93 NGKLNILVNNVGTNIRK----PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~ 168 (272)
+++|++|||+|..... ...+...+.+...+.++..+...+.+...+.+ +..+.|+++|+.....+.+....|+
T Consensus 82 -g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~ 158 (274)
T d2pd4a1 82 -GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMG 158 (274)
T ss_dssp -SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHH
T ss_pred -CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhh
Confidence 7999999999975443 22334455566666666666665555554432 2234677778877788888889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCc
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYI 248 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~ 248 (272)
++|+|+++++|+++.|++++|||||+|+||+++|++.......++.........|.+++.+|+|+|+++.||+|+.+.|+
T Consensus 159 asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~i 238 (274)
T d2pd4a1 159 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGV 238 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCC
Confidence 99999999999999999999999999999999999987776556666667778999999999999999999999999999
Q ss_pred cccEEEeCCCcCCCCCCCCC
Q 024125 249 TGQIISVDGGFTANGFNPGI 268 (272)
Q Consensus 249 ~G~~i~~dgG~~~~~~~~~~ 268 (272)
|||+|.+|||+++.|+.+.-
T Consensus 239 tG~~i~vDGG~~~~g~~~~~ 258 (274)
T d2pd4a1 239 SGEVHFVDAGYHVMGMGAVE 258 (274)
T ss_dssp CSCEEEESTTGGGBSSCCCT
T ss_pred cCceEEECCChhhccCCccc
Confidence 99999999999998877643
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=6.7e-44 Score=295.62 Aligned_cols=228 Identities=24% Similarity=0.295 Sum_probs=196.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|++|||||++|||+++|++|+++|++|++++|+++. .+....++|+++......+..+..... ..
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~ 66 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA--PL 66 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS--CE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc--cc
Confidence 6999999999999999999999999999999998642 355677899999999999998887775 46
Q ss_pred cEEEECCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH------HcCCCCeEEEecCCCCCCCCCCChh
Q 024125 97 NILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL------KASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 97 d~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~------~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
+.++++++... .......+.+.|++++++|+.+++.+++.+.+.+ .+++.|+|||+||..+..+.++..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~ 146 (241)
T d1uaya_ 67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 146 (241)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchh
Confidence 66666666432 2344557789999999999999999999999985 4455689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhcCCC
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL-QRVGEPEEVASLVAYLCLPAA 245 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~a~~~~~l~~~~~ 245 (272)
|+++|+|+++|+|++|.||+++|||||+|+||+++|++..... .+.........|. +++++|+|+|+++.||++ +
T Consensus 147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--~ 222 (241)
T d1uaya_ 147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--EKAKASLAAQVPFPPRLGRPEEYAALVLHILE--N 222 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--C
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh--hhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--C
Confidence 9999999999999999999999999999999999999987653 3444555555665 899999999999999997 4
Q ss_pred CCccccEEEeCCCcCCC
Q 024125 246 SYITGQIISVDGGFTAN 262 (272)
Q Consensus 246 ~~~~G~~i~~dgG~~~~ 262 (272)
.|+|||+|.+|||++|.
T Consensus 223 ~~iTG~~i~VDGG~~m~ 239 (241)
T d1uaya_ 223 PMLNGEVVRLDGALRMA 239 (241)
T ss_dssp TTCCSCEEEESTTCCCC
T ss_pred CCCCCCEEEECCcccCC
Confidence 79999999999999874
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-43 Score=299.46 Aligned_cols=220 Identities=29% Similarity=0.393 Sum_probs=193.2
Q ss_pred CC-EEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 17 GM-TALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 17 ~k-~vlItGa~~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
|| ++|||||++|||+++|++|+++ |++|++++|+.+++++..+++++.+.++.++.+|++|.++++++++++.+++ +
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g 80 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-G 80 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-C
Confidence 45 4599999999999999999986 8999999999999999999999888889999999999999999999999999 7
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC---------------
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--------------- 159 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~--------------- 159 (272)
++|++|||||+....+..+.+.++|+++|++|++|++.+++.++|+|+++ |+||++||..+..
T Consensus 81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~~~k~~~ 158 (275)
T d1wmaa1 81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRS 158 (275)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceeccccccchhhhhhhcc
Confidence 99999999999888888888889999999999999999999999999764 8999999965422
Q ss_pred --------------------------CCCCChhhHHHHHHHHHHHHHHHHHHcc----CCeeEEEeeCCcccChhhHhhh
Q 024125 160 --------------------------HVGSGSIYGATKAAMNQLTRNLACEWAK----DNIRTNSVAPWYTKTSLVERLL 209 (272)
Q Consensus 160 --------------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~----~~i~v~~v~PG~v~t~~~~~~~ 209 (272)
...+...|++||+++.+|++.++++|++ .||+||+++||+++|+|....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~- 237 (275)
T d1wmaa1 159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK- 237 (275)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT-
T ss_pred cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc-
Confidence 1223457999999999999999999866 489999999999999996432
Q ss_pred hCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--cCCCCCccccEEEeCC
Q 024125 210 ENKEFVDKVIARTPLQRVGEPEEVASLVAYLC--LPAASYITGQIISVDG 257 (272)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~--~~~~~~~~G~~i~~dg 257 (272)
...+|+|+|+++++++ +++..+++|++++ |.
T Consensus 238 ----------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~ 270 (275)
T d1wmaa1 238 ----------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK 270 (275)
T ss_dssp ----------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred ----------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence 2348999999999987 4566788999987 54
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=3.8e-42 Score=289.01 Aligned_cols=241 Identities=24% Similarity=0.265 Sum_probs=201.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhC-CCeEEEEEecC----CCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSK-GFVVSGSVCDA----ASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~D~----~~~~~~~~~~~~~~~~ 91 (272)
-++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++... +.+.....+|. +..+.++++++++.++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999998655 45666666544 45666666544 3467788889999999
Q ss_pred cCCCccEEEECCCCCCCCCCCC-----------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----CCCeEEEecCC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIE-----------YSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-----GVGSIVFISSV 155 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~-----------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~ii~vsS~ 155 (272)
+ +++|++|||||+..+.++.+ ...+.+...+..|+.+.+...+...+.+... ..+.+++++|.
T Consensus 82 ~-g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (266)
T d1mxha_ 82 F-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA 160 (266)
T ss_dssp H-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred h-CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence 9 79999999999876655432 2344577888999999999888888777543 34688899999
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCC-CCHHHHH
Q 024125 156 GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRV-GEPEEVA 234 (272)
Q Consensus 156 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~a 234 (272)
.+..+.++...|++||+|+++|+|+++.|++++|||||+|+||+++|++.. ..+..+.+....|+++. ++|||+|
T Consensus 161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~----~~~~~~~~~~~~pl~r~~~~peeva 236 (266)
T d1mxha_ 161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAAQIA 236 (266)
T ss_dssp GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS----CHHHHHHHHTTCTTTSCCBCHHHHH
T ss_pred cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC----CHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999998753 24556677788898665 7999999
Q ss_pred HHHHHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 235 SLVAYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 235 ~~~~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
++++||+++++.|+|||+|.+|||++|..
T Consensus 237 ~~v~fL~s~~s~~itG~~i~vDGG~~l~~ 265 (266)
T d1mxha_ 237 DAIAFLVSKDAGYITGTTLKVDGGLILAR 265 (266)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred HHHHHHhCchhCCccCCeEEECccHhhhC
Confidence 99999999999999999999999999863
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=4.2e-42 Score=289.20 Aligned_cols=244 Identities=19% Similarity=0.172 Sum_probs=204.2
Q ss_pred CCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa--~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|+||++||||| ++|||+++|++|+++|++|++++|+.++..+... +..+.+...+++|++++++++.+++.+.+.+
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~--~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~ 81 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT--DRLPAKAPLLELDVQNEEHLASLAGRVTEAI 81 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH--TTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH--HHcCCceeeEeeecccccccccccchhhhcc
Confidence 78999999994 5799999999999999999999999877643322 2335567778999999999999999998875
Q ss_pred C--CCccEEEECCCCCC-----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCCh
Q 024125 93 N--GKLNILVNNVGTNI-----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (272)
Q Consensus 93 ~--~~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~ 165 (272)
+ +++|+++||+|... ..++.+.+.+++.+.+.+|+...+...+...+.+.. +.+++++|.....+.+...
T Consensus 82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~p~~~ 158 (268)
T d2h7ma1 82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAMPAYN 158 (268)
T ss_dssp CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCCTTTH
T ss_pred ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccCcccc
Confidence 2 46999999999643 235567888999999999999999888887665432 4566667777778888999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----------HHHHHHHHhcCCCCC-CCCHHHHH
Q 024125 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----------KEFVDKVIARTPLQR-VGEPEEVA 234 (272)
Q Consensus 166 ~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~e~a 234 (272)
.|+++|+|+.+|+|+++.|++++|||||+|+||+++|++...+... ....+......|+++ +.+|+|++
T Consensus 159 ~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva 238 (268)
T d2h7ma1 159 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVA 238 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHH
T ss_pred hhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999998765432 123344556688766 89999999
Q ss_pred HHHHHHhcCCCCCccccEEEeCCCcCCCC
Q 024125 235 SLVAYLCLPAASYITGQIISVDGGFTANG 263 (272)
Q Consensus 235 ~~~~~l~~~~~~~~~G~~i~~dgG~~~~~ 263 (272)
+++.||+|+...|+||++|.+|||++...
T Consensus 239 ~~v~fL~Sd~a~~iTG~~i~vDGG~~~~~ 267 (268)
T d2h7ma1 239 KTVCALLSDWLPATTGDIIYADGGAHTQL 267 (268)
T ss_dssp HHHHHHHSSSCTTCCSEEEEESTTGGGCC
T ss_pred HHHHHHhCchhcCccCCEEEECcCccccc
Confidence 99999999999999999999999998753
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=1.4e-42 Score=289.15 Aligned_cols=224 Identities=22% Similarity=0.232 Sum_probs=185.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHH---HCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH--H
Q 024125 17 GMTALVTGGTRGIGQATVEELA---GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS--K 91 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~---~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~ 91 (272)
-|+||||||++|||+++|++|+ ++|++|++++|++++++++.+.. +.+.++.++.+|++|+++++++++++.+ +
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-KNHSNIHILEIDLRNFDAYDKLVADIEGVTK 80 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-HHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-hcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence 3899999999999999999997 47999999999999888775443 4456889999999999999999999854 4
Q ss_pred cCCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----------CCCeEEEecCCCCCC
Q 024125 92 FNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-----------GVGSIVFISSVGGLS 159 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----------~~g~ii~vsS~~~~~ 159 (272)
+ +++|++|||||+... .++.+.+.++|++++++|+.|++.++++++|+|+++ +.|++|+++|..+..
T Consensus 81 ~-~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~ 159 (248)
T d1snya_ 81 D-QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 159 (248)
T ss_dssp G-GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred c-CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 5 689999999998544 467789999999999999999999999999999863 358999999987653
Q ss_pred ---CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHH
Q 024125 160 ---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASL 236 (272)
Q Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~ 236 (272)
+.++..+|++||+|+.+|+++++.|++++||+||+|+||+++|+|.....+ .++++.+..
T Consensus 160 ~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~-----------------~~~~~~~~~ 222 (248)
T d1snya_ 160 QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP-----------------LDVPTSTGQ 222 (248)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS-----------------BCHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC-----------------CCchHHHHH
Confidence 456678999999999999999999999999999999999999999754311 133444444
Q ss_pred HHHHhcCCCCCccccEEEeCCCc
Q 024125 237 VAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 237 ~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
++.++.......+|++|++||+.
T Consensus 223 i~~~i~~l~~~~tG~~i~~dG~~ 245 (248)
T d1snya_ 223 IVQTISKLGEKQNGGFVNYDGTP 245 (248)
T ss_dssp HHHHHHHCCGGGTTCEECTTSCB
T ss_pred HHHHHHhcCccCCCcEEEECCeE
Confidence 44444433455689999999864
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-41 Score=285.55 Aligned_cols=216 Identities=24% Similarity=0.247 Sum_probs=193.7
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.. .+..+..+.+|.++.+++...++++.+.+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~- 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM- 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-
Confidence 8999999999999999999999999999999999999999999888754 46788889999999999999999999998
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
+.+|+++||||.....++.+.+.++|++++++|+.+++.+++.++|+|+++ .|+||++||.++..+.++...|++||+|
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaa 169 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFA 169 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHH
Confidence 789999999999888899999999999999999999999999999999754 4999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcc--CCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 174 MNQLTRNLACEWAK--DNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 174 ~~~~~~~la~el~~--~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+++|+++|+.|+++ .||+||+|+||+++|+|..+..... +.....+|+++++.++....
T Consensus 170 l~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~e~~a~~i~~~~~ 230 (269)
T d1xu9a_ 170 LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----------VHMQAAPKEECALEIIKGGA 230 (269)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----------GGGGCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC----------ccccCCCHHHHHHHHHHHhh
Confidence 99999999999975 4799999999999999976543321 11224578999988876553
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=6.2e-41 Score=279.39 Aligned_cols=222 Identities=21% Similarity=0.209 Sum_probs=180.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+.|+||||||++|||+++|++|+++|+ +|++++|+.++++++.+ ..+.++.++.+|+++.++++++++++.+.++
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 78 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999996 68899999988776543 2356788999999999999999999998873
Q ss_pred C-CccEEEECCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-----------CCeEEEecCCCCCC-
Q 024125 94 G-KLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-----------VGSIVFISSVGGLS- 159 (272)
Q Consensus 94 ~-~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----------~g~ii~vsS~~~~~- 159 (272)
. ++|++|||||+.. ..++.+.+.++|++++++|+.|++.+++.++|+|++++ .+++++++|.....
T Consensus 79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 158 (250)
T d1yo6a1 79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT 158 (250)
T ss_dssp GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence 2 4999999999754 46778899999999999999999999999999997642 36889988765433
Q ss_pred ------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHH
Q 024125 160 ------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEV 233 (272)
Q Consensus 160 ------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 233 (272)
+..+..+|++||+|+.+|+++++.||+++||+||+|+||+++|+|.... ...+|+|.
T Consensus 159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~~e~~ 221 (250)
T d1yo6a1 159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-----------------AALTVEQS 221 (250)
T ss_dssp TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------HHH
T ss_pred CCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC-----------------CCCCHHHH
Confidence 2344567999999999999999999999999999999999999996431 12378999
Q ss_pred HHHHHHHhcCCCCCccccEEEeCC
Q 024125 234 ASLVAYLCLPAASYITGQIISVDG 257 (272)
Q Consensus 234 a~~~~~l~~~~~~~~~G~~i~~dg 257 (272)
++.++..+.......+|++|..||
T Consensus 222 a~~~~~~~~~~~~~~sG~f~~~~g 245 (250)
T d1yo6a1 222 TAELISSFNKLDNSHNGRFFMRNL 245 (250)
T ss_dssp HHHHHHHHTTCCGGGTTCEEETTE
T ss_pred HHHHHHHHhcCCCCCCeEEECCCC
Confidence 999988887666778999998875
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.5e-41 Score=279.40 Aligned_cols=218 Identities=16% Similarity=0.142 Sum_probs=187.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (272)
+||+||||||++|||++++++|+++|++|+++++++.. .........+|.++.++.+.+.+++.+.++ +
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ 70 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999999999999986643 123445567888888888888888877753 3
Q ss_pred CccEEEECCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHH
Q 024125 95 KLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (272)
Q Consensus 95 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a 173 (272)
++|++|||||.... ..+.+.+.++|++++++|+.+++.+++.++|+|++. |+||++||.++..+.++..+|++||+|
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~~~~~~~Y~asKaa 148 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGA 148 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--cceeEEccHHHcCCccCCcccHHHHHH
Confidence 69999999997444 455667788999999999999999999999999653 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHc--cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 174 MNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 174 ~~~~~~~la~el~--~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
+++|+|+|+.|++ ++||+||+|+||+++|+|.+...+. .+..++.+|+++++.+.+|+++...+++|+
T Consensus 149 l~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~~pe~va~~~~~l~s~~~~~i~G~ 218 (236)
T d1dhra_ 149 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLEFLVETFHDWITGNKRPNSGS 218 (236)
T ss_dssp HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHHHHHHHHHHHHTTTTCCCTTC
T ss_pred HHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc----------chhhcCCCHHHHHHHHHHHhCCCccCCCCC
Confidence 9999999999998 5799999999999999997655432 233456789999999999999999999998
Q ss_pred EEEe
Q 024125 252 IISV 255 (272)
Q Consensus 252 ~i~~ 255 (272)
.|.+
T Consensus 219 ~i~v 222 (236)
T d1dhra_ 219 LIQV 222 (236)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 7765
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=7.2e-40 Score=273.78 Aligned_cols=220 Identities=28% Similarity=0.450 Sum_probs=169.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|+||||||++|||+++|++|+++|++|++++|++++ ..+|+++.+..+....++..+..+.+|
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 899999999999999999999999999999987542 247999999988887777766656799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC------------------
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------------ 159 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~------------------ 159 (272)
+++||||+.... +.+.....+|..+...+.+...+.+.+.....+.++.+.....
T Consensus 65 ~lv~~Ag~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 137 (257)
T d1fjha_ 65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred EEEEcCCCCCcH-------HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence 999999974322 3467788999999999999999999887766777666543211
Q ss_pred ----------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHh-cCCCCCCC
Q 024125 160 ----------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIA-RTPLQRVG 228 (272)
Q Consensus 160 ----------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~ 228 (272)
..++..+|++||+|+++|+|++|.||+++|||||+|+||+++|++......+++..+.... ..|++++.
T Consensus 138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g 217 (257)
T d1fjha_ 138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA 217 (257)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCC
T ss_pred EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCc
Confidence 1123456999999999999999999999999999999999999998876665555444444 36999999
Q ss_pred CHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 229 EPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 229 ~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
+|+|+++++.||+|+++.|+|||+|.+|||++.
T Consensus 218 ~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta 250 (257)
T d1fjha_ 218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250 (257)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred CHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence 999999999999999999999999999999863
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.7e-39 Score=268.22 Aligned_cols=217 Identities=15% Similarity=0.141 Sum_probs=181.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF-NGK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 95 (272)
+++||||||++|||++++++|+++|++|++++|+++.. ........+|..+.+......+.+...+ .++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 71 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ 71 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence 45679999999999999999999999999999986531 1234455678888887777777766643 268
Q ss_pred ccEEEECCCCCCCC-CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 96 LNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 96 id~li~~ag~~~~~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
+|+||||||..... +..+.+.++|+.++++|+.+++.++++++|+|++. |+||++||..+..+.++..+|++||+|+
T Consensus 72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~Y~asKaal 149 (235)
T d1ooea_ 72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAV 149 (235)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCcccccchHHHHHHH
Confidence 99999999975543 44555568899999999999999999999999654 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHc--cCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHH-HhcCCCCCcccc
Q 024125 175 NQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAY-LCLPAASYITGQ 251 (272)
Q Consensus 175 ~~~~~~la~el~--~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~-l~~~~~~~~~G~ 251 (272)
++|+++|+.|++ +.+|+||+|+||+++|+|.+...++ .+..++.+|+++++.+++ +.++...+++|+
T Consensus 150 ~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~----------~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~ 219 (235)
T d1ooea_ 150 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRPSSGA 219 (235)
T ss_dssp HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTC
T ss_pred HHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC----------CccccCCCHHHHHHHHHHHhcCccccCCCce
Confidence 999999999998 4689999999999999998765432 233456789999999875 445667789999
Q ss_pred EEEe
Q 024125 252 IISV 255 (272)
Q Consensus 252 ~i~~ 255 (272)
.+.+
T Consensus 220 ~i~v 223 (235)
T d1ooea_ 220 LLKI 223 (235)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9988
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=3.1e-32 Score=227.55 Aligned_cols=226 Identities=19% Similarity=0.150 Sum_probs=178.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.++++|||||++|||++++++|+++|+ +|++++|+. +..+++.+++...+.++.++.||++|.++++++++++.+.
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 367999999999999999999999999 689999874 4466777778778889999999999999999999988664
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
+++|.++||+|.....++.+.+.++|++++++|+.+++++.+.+ ...+.++||++||..+..+.++...|+++|
T Consensus 88 --~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~YaAak 161 (259)
T d2fr1a1 88 --VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGN 161 (259)
T ss_dssp --SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred --ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHHHHH
Confidence 47999999999999999999999999999999999999887754 556678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCcccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQ 251 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~ 251 (272)
++++.|++.++ ..|+++++|+||.+.++.+..- .....+ . ...-...+|+++++.+..++... .....
T Consensus 162 a~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~----~~~~~~-~-~~G~~~~~~~~~~~~l~~~l~~~--~~~~~ 229 (259)
T d2fr1a1 162 AYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEG----PVADRF-R-RHGVIEMPPETACRALQNALDRA--EVCPI 229 (259)
T ss_dssp HHHHHHHHHHH----HTTCCCEEEEECCBC----------------C-T-TTTEECBCHHHHHHHHHHHHHTT--CSSCE
T ss_pred HhHHHHHHHHH----hCCCCEEECCCCcccCCccccc----hHHHHH-H-hcCCCCCCHHHHHHHHHHHHhCC--CceEE
Confidence 99998776554 4599999999998865433211 111111 1 11113458999999998888543 33455
Q ss_pred EEEeCCCc
Q 024125 252 IISVDGGF 259 (272)
Q Consensus 252 ~i~~dgG~ 259 (272)
++.+|...
T Consensus 230 v~~~d~~~ 237 (259)
T d2fr1a1 230 VIDVRWDR 237 (259)
T ss_dssp ECEECHHH
T ss_pred EEeCcHHH
Confidence 66777553
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=4.8e-22 Score=172.60 Aligned_cols=226 Identities=13% Similarity=0.043 Sum_probs=154.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-----HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-----VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|+||||||+|.||++++++|+++|++|+.++|.. ++.+.+..+......++.++.+|++|.++++++++..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---- 77 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence 8999999999999999999999999999999853 3333333333333567899999999999999998764
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HV 161 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~ 161 (272)
.+|+++|+|+...... +.++.+..+++|+.|+.+++.++...- ..+..++|++||...+. +.
T Consensus 78 --~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~ 150 (357)
T d1db3a_ 78 --QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPF 150 (357)
T ss_dssp --CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred --CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCC
Confidence 6999999999754332 234456789999999999998874321 12335799999865321 13
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---HHHHHHHHhcCC----------CCCCC
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---KEFVDKVIARTP----------LQRVG 228 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~----------~~~~~ 228 (272)
.+...|+.||.+.+.+++.+++.+ ++.+..+.|+.+..+........ ...+.......+ ...+.
T Consensus 151 ~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~ 227 (357)
T d1db3a_ 151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG 227 (357)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecce
Confidence 345789999999999999999886 68888899887766642111100 112222222111 11356
Q ss_pred CHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 229 EPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 229 ~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
.++|+++++..++.. -.|+.+++.+|...
T Consensus 228 ~v~D~~~a~~~~~~~----~~~~~yni~sg~~~ 256 (357)
T d1db3a_ 228 HAKDYVKMQWMMLQQ----EQPEDFVIATGVQY 256 (357)
T ss_dssp EHHHHHHHHHHTTSS----SSCCCEEECCCCCE
T ss_pred eechHHHHHHHHHhC----CCCCeEEECCCCce
Confidence 799999999877743 24778888877554
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.82 E-value=5.3e-22 Score=157.47 Aligned_cols=155 Identities=15% Similarity=0.095 Sum_probs=113.8
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
...+|+||++|||||++|||+++++.|+++|++|++++|+.++++++.+++.... ++....+|+++.+++++++
T Consensus 17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~----- 90 (191)
T d1luaa1 17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV----- 90 (191)
T ss_dssp TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT-----
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHh-----
Confidence 3568999999999999999999999999999999999999999999988876542 3345789999999987766
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-CCCChhhHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-VGSGSIYGA 169 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-~~~~~~Y~~ 169 (272)
+++|+||||||.. +...+.++|++.+++|+.+.++....+.+.+.... .....+++...... ..+...|++
T Consensus 91 ---~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~~ 162 (191)
T d1luaa1 91 ---KGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLKL 162 (191)
T ss_dssp ---TTCSEEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHHH
T ss_pred ---cCcCeeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHHH
Confidence 6799999999973 34468899999999998887765443322221111 22222222222111 112346999
Q ss_pred HHHHHHHHHH
Q 024125 170 TKAAMNQLTR 179 (272)
Q Consensus 170 sK~a~~~~~~ 179 (272)
+|+++..+++
T Consensus 163 sk~a~~~l~~ 172 (191)
T d1luaa1 163 HRACIAKLFE 172 (191)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHHh
Confidence 9999987764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=2e-19 Score=154.59 Aligned_cols=227 Identities=16% Similarity=0.116 Sum_probs=152.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH---HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE---LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++||||||+|+||+++++.|+++|++|++++|.... .....+.+. ..++.++++|++|.+.+.++++. .
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~------~ 72 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHD------H 72 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHH------T
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhc------c
Confidence 469999999999999999999999999998763221 111122222 34677889999999998888865 3
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC------------CC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------VG 162 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~------------~~ 162 (272)
++|+|||+|+..... .+.++.++.+++|+.|+.++++++. +.+..++|++||...+.. ..
T Consensus 73 ~~d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~----~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~ 144 (338)
T d1udca_ 73 AIDTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMR----AANVKNFIFSSSATVYGDQPKIPYVESFPTGT 144 (338)
T ss_dssp TCSEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred CCCEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHHH----HhCCCEEEecCcceEEccccccccccccccCC
Confidence 699999999963211 1334556899999999999988874 445568999998664421 23
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh-------C---HHHHHHHHhc-CC--------
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE-------N---KEFVDKVIAR-TP-------- 223 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~-------~---~~~~~~~~~~-~~-------- 223 (272)
+...|+.+|.+.+.+++....+. .++.+..++|+.+-++....... . +......... .+
T Consensus 145 p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~ 222 (338)
T d1udca_ 145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY 222 (338)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCS
T ss_pred CcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCc
Confidence 46789999999999998887774 36777777777665543211000 0 1111111111 11
Q ss_pred -------CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 224 -------LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 224 -------~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
...+..++|++.+...+.........++.+++.++..++
T Consensus 223 ~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~s 268 (338)
T d1udca_ 223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS 268 (338)
T ss_dssp SSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEE
T ss_pred ccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCc
Confidence 112346788887776655433344457889988876543
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.81 E-value=1.3e-18 Score=149.70 Aligned_cols=221 Identities=19% Similarity=0.181 Sum_probs=150.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh--CCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+||+||||||+|.||++++++|+++|++|+.+.|+..+.+.+.+.... .......+..|+++.+++.+++
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------- 81 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-------- 81 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT--------
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc--------
Confidence 489999999999999999999999999999999998877666544332 2445566778999998876665
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCCC------------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSH------------ 160 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~~------------ 160 (272)
..+|.++|+++..... .+ ....+..|+.++.++++.+ .+. +..++|++||..+...
T Consensus 82 ~~~~~v~~~a~~~~~~----~~---~~~~~~~nv~gt~~ll~~~----~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e 150 (342)
T d1y1pa1 82 KGAAGVAHIASVVSFS----NK---YDEVVTPAIGGTLNALRAA----AATPSVKRFVLTSSTVSALIPKPNVEGIYLDE 150 (342)
T ss_dssp TTCSEEEECCCCCSCC----SC---HHHHHHHHHHHHHHHHHHH----HTCTTCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred ccchhhhhhccccccc----cc---ccccccchhhhHHHHHHhh----hcccccccccccccceeeccCCCCCCCccccc
Confidence 4689999999864321 23 2456778999999888876 343 4579999999653211
Q ss_pred -------------------CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---HHHHHHH
Q 024125 161 -------------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---KEFVDKV 218 (272)
Q Consensus 161 -------------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---~~~~~~~ 218 (272)
..+...|+.+|.+.+.+++.+++... .++++.+++|+.+-.+........ ..+....
T Consensus 151 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l 229 (342)
T d1y1pa1 151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSL 229 (342)
T ss_dssp TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHH
T ss_pred cccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHHHHH
Confidence 11224699999999999999988864 468888888876655432111111 1122221
Q ss_pred Hh--------cCCCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 219 IA--------RTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 219 ~~--------~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
.. ..+...+..++|+|++++..+.. ....|+.+...++
T Consensus 230 ~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~--~~~~g~~~~~~~~ 275 (342)
T d1y1pa1 230 FNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG 275 (342)
T ss_dssp HTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred HcCCcCcccCCccceeeeeHHHHHHHHHHhhcC--ccccceEEEEcCC
Confidence 11 12223356789999998766632 2335666644443
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.81 E-value=1.5e-19 Score=156.96 Aligned_cols=227 Identities=15% Similarity=0.092 Sum_probs=156.3
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEE-EEeeCChHHH-HHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVV-HTCSRNEVEL-NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v-~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++||||||+|.||++++++|++.|++| +.+++..... .+..+.+ ....++.++.+|++|.+.++.+++.. +
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~------~ 73 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY------Q 73 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH------C
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC------C
Confidence 469999999999999999999999964 4455422111 0011111 11347888999999999998888653 6
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----CCCeEEEecCCCCCC-----------
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-----GVGSIVFISSVGGLS----------- 159 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~ii~vsS~~~~~----------- 159 (272)
+|+|||+|+..... .+.++....+++|+.++.++++.+....... +..++|++||...+.
T Consensus 74 ~d~VihlAa~~~~~----~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 149 (361)
T d1kewa_ 74 PDAVMHLAAESHVD----RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp CSEEEECCSCCCHH----HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred CCEEEECccccchh----hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence 99999999863211 1234456789999999999999987765432 235899999966432
Q ss_pred ----------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCC----
Q 024125 160 ----------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ---- 225 (272)
Q Consensus 160 ----------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---- 225 (272)
+..+...|+.||.+.+.+++.++..+ ++.+..++|+.+-.|....-.--+.++.+.....+..
T Consensus 150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~ 226 (361)
T d1kewa_ 150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK 226 (361)
T ss_dssp SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT
T ss_pred cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCC
Confidence 12234669999999999999998876 6888889988776654211000123444444443321
Q ss_pred -----CCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 226 -----RVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 226 -----~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
.+..++|+++++..++... ..|+.+++.+|...
T Consensus 227 g~~~r~~i~v~D~a~ai~~~~~~~---~~~~~~Ni~s~~~~ 264 (361)
T d1kewa_ 227 GDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK 264 (361)
T ss_dssp SCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred CCeEEeCEEHHHHHHHHHHHHhcC---CCCCeEEECCCCCc
Confidence 2357999999999888532 23788999877543
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.80 E-value=2.3e-18 Score=150.79 Aligned_cols=174 Identities=14% Similarity=0.103 Sum_probs=125.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH----------------HHHHHHHHH-hCCCeEEEEEecCCCHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE----------------LNKCLKEWQ-SKGFVVSGSVCDAASPD 79 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~----------------~~~~~~~~~-~~~~~~~~~~~D~~~~~ 79 (272)
||+||||||+|.||++++++|+++|++|+++|.-..+ ..+...... ..+.++.++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 7899999999999999999999999999998732111 111111221 12457888999999999
Q ss_pred HHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC
Q 024125 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS 159 (272)
Q Consensus 80 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~ 159 (272)
.++++++.. ++|+|||.|+..... ....+.+.....+.+|+.|+.+++.++... ....++++.||.....
T Consensus 81 ~l~~~~~~~------~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~~~ 150 (393)
T d1i24a_ 81 FLAESFKSF------EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGEYG 150 (393)
T ss_dssp HHHHHHHHH------CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGGGC
T ss_pred HHHHHHHhh------cchheeccccccccc-cccccccccccccccccccccHHHHHHHHh---ccccceeecccccccc
Confidence 999888764 699999999863221 112355667788999999999998877332 2223566666654321
Q ss_pred ------------------------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccCh
Q 024125 160 ------------------------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (272)
Q Consensus 160 ------------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~ 203 (272)
+..+...|+.+|.+.+.+++.++++. ++++..+.|+.+..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~ 215 (393)
T d1i24a_ 151 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGV 215 (393)
T ss_dssp CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECS
T ss_pred ccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCC
Confidence 12334579999999999999988876 788888888766543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=3.5e-18 Score=146.87 Aligned_cols=212 Identities=16% Similarity=0.029 Sum_probs=141.2
Q ss_pred CEE-EEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-----HHHHHHHHHHh-CCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 18 MTA-LVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-----ELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 18 k~v-lItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
|+| |||||+|+||++++++|+++|++|+.++|... +++.+...... ...++.++.+|++|.+.+.++++..
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 78 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-- 78 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc--
Confidence 445 99999999999999999999999999998542 12222111111 1247889999999999998888764
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----------- 159 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~----------- 159 (272)
.+++++|+++..... ...+.....+++|+.|+.+++.++..+-. .+..++|++||...+.
T Consensus 79 ----~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~ 149 (347)
T d1t2aa_ 79 ----KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETT 149 (347)
T ss_dssp ----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred ----ccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCC
Confidence 688899988853221 13445566789999999998887744321 2234899999865331
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCC---------CCC
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTP---------LQR 226 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~---------~~~ 226 (272)
+..+...|+.||.+.|.+++.+++.+ ++.+..+.|+.+..+........ ...........+ ...
T Consensus 150 ~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~ 226 (347)
T d1t2aa_ 150 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD 226 (347)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceee
Confidence 23345679999999999999998875 67777888866555421110000 111121222211 124
Q ss_pred CCCHHHHHHHHHHHhcC
Q 024125 227 VGEPEEVASLVAYLCLP 243 (272)
Q Consensus 227 ~~~~~e~a~~~~~l~~~ 243 (272)
+..++|+++++..++..
T Consensus 227 ~i~v~D~~~a~~~~~~~ 243 (347)
T d1t2aa_ 227 WGHAKDYVEAMWLMLQN 243 (347)
T ss_dssp CEEHHHHHHHHHHHHHS
T ss_pred eeEecHHHHHHHHHhhc
Confidence 56899999999988853
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.77 E-value=2.3e-17 Score=141.60 Aligned_cols=226 Identities=12% Similarity=0.031 Sum_probs=155.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC----hHHHHHHHHHHH-hCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN----EVELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~----~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+.|++|||||+|.||++++++|.++|++|+.++|. .+.......... ....++.++..|..|........
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----- 89 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----- 89 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-----
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc-----
Confidence 46899999999999999999999999999999863 222222221111 11246888999999998765444
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----------- 159 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~----------- 159 (272)
...+.++|.++..... .+.++....+++|+.|+.+++.++ .+.+..++|++||...+.
T Consensus 90 ---~~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~ 158 (341)
T d1sb8a_ 90 ---AGVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASSSTYGDHPGLPKVEDT 158 (341)
T ss_dssp ---TTCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCTTC
T ss_pred ---cccccccccccccccc----ccccCccchhheeehhHHHHHHHH----HhcCCceEEEcccceeeCCCCCCCccCCC
Confidence 4689999888753211 144567789999999999998887 455567999999976432
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC----HHHHHHHHhcCCC---------CC
Q 024125 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN----KEFVDKVIARTPL---------QR 226 (272)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~---------~~ 226 (272)
+..+...|+.+|.+.+.+++.+++.. ++++..+.|+.+.++....-... ...........+. ..
T Consensus 159 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~ 235 (341)
T d1sb8a_ 159 IGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRD 235 (341)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEEC
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEE
Confidence 23345789999999999999998876 67888888876665432110000 1223333333222 24
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 227 VGEPEEVASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 227 ~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
+..++|++.++..++..... ..|+.+++.++...
T Consensus 236 ~i~v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~~ 269 (341)
T d1sb8a_ 236 FCYIENTVQANLLAATAGLD-ARNQVYNIAVGGRT 269 (341)
T ss_dssp CEEHHHHHHHHHHHHTCCGG-GCSEEEEESCSCCE
T ss_pred EEEEeccchhhhhhhhcccc-ccceeeeecccccc
Confidence 56789999998877754322 45778887766443
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1e-17 Score=144.05 Aligned_cols=229 Identities=19% Similarity=0.174 Sum_probs=152.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC------ChHHHHHHHHHHH-hCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSR------NEVELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r------~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
|+||||||+|.||++++++|+++|++|+.++| .........+.+. ....++.++.+|++|.+.+++++..
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--- 79 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--- 79 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence 88999999999999999999999999998864 1111111111111 1235788899999999998887754
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC----------
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------- 160 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~---------- 160 (272)
..+++++|+|+..... .+.++....+++|+.++.+++.++ ++.+..+++++||......
T Consensus 80 ---~~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~~~~~~~~~~~~~~ 148 (346)
T d1ek6a_ 80 ---YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEAH 148 (346)
T ss_dssp ---CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred ---cccccccccccccCcH----hhHhCHHHHHHhhhcccccccchh----hhcCcccccccccceeeeccccccccccc
Confidence 4699999999964321 133445678999999999888876 5566678999987653321
Q ss_pred --CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhh-------hC---HHHHHHHHh-cCC----
Q 024125 161 --VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLL-------EN---KEFVDKVIA-RTP---- 223 (272)
Q Consensus 161 --~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~-------~~---~~~~~~~~~-~~~---- 223 (272)
.....+|+.+|.+.+...+.+++. ..++....+.|+.+.++...... .. +........ ..+
T Consensus 149 ~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 226 (346)
T d1ek6a_ 149 PTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF 226 (346)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred cccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEc
Confidence 234467999999999998887764 34677777777655443211000 00 111111111 111
Q ss_pred -----------CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 224 -----------LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 224 -----------~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
...+..++|++..+..+.........++.+++.+|..++
T Consensus 227 g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s 276 (346)
T d1ek6a_ 227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS 276 (346)
T ss_dssp CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred CCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCccc
Confidence 123578999999988776544445568899998886554
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.77 E-value=5.3e-18 Score=145.20 Aligned_cols=213 Identities=15% Similarity=0.061 Sum_probs=144.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-----HHHHHHHHHH-hCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-----ELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
|++|||||+|.||++++++|+++|++|+.++|... +...+..... .....+.++.+|+++.+++.+.++..
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--- 78 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 78 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence 79999999999999999999999999999998432 2222221111 11346788899999999998888753
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCCCCC----------C
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLS----------H 160 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~~~~----------~ 160 (272)
++|+|||+|+..... ...+.....+..|+.++.+++.++.....+. ...+++..||..... +
T Consensus 79 ---~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~ 151 (339)
T d1n7ha_ 79 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 151 (339)
T ss_dssp ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred ---ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence 699999999963221 1234567889999999999988886654433 234566666543221 2
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCH---HHHHHH-HhcCC---------CCCC
Q 024125 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENK---EFVDKV-IARTP---------LQRV 227 (272)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~---~~~~~~-~~~~~---------~~~~ 227 (272)
..+...|+.+|.+.+.+++.+++.+ ++.+..++|+.+-.|......... ...... ....+ ...+
T Consensus 152 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~ 228 (339)
T d1n7ha_ 152 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW 228 (339)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence 3456789999999999999998876 688999999877665422111001 111111 11111 1125
Q ss_pred CCHHHHHHHHHHHhcC
Q 024125 228 GEPEEVASLVAYLCLP 243 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~~ 243 (272)
..++|+++.+..++..
T Consensus 229 ~~v~D~a~~~~~~~~~ 244 (339)
T d1n7ha_ 229 GFAGDYVEAMWLMLQQ 244 (339)
T ss_dssp EEHHHHHHHHHHHHTS
T ss_pred eeeehHHHHHHHHHhc
Confidence 6699999999888854
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=6.9e-18 Score=144.87 Aligned_cols=217 Identities=12% Similarity=0.105 Sum_probs=149.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
++||||||+|.||++++++|+++| ++|+.+++......... ...++.++.+|+++.+++.+.+. ..+
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~-------~~~ 68 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV-------KKC 68 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH-------HHC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH-------hCC
Confidence 469999999999999999999999 58999988655433222 13478899999998766544332 248
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC----------------
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------------- 160 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~---------------- 160 (272)
|+|||+|+...... ..++....+++|+.++.++++++ .+.+ -+++++||......
T Consensus 69 d~Vih~a~~~~~~~----~~~~~~~~~~~nv~gt~~ll~~~----~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~ 139 (342)
T d2blla1 69 DVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVG 139 (342)
T ss_dssp SEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCC
T ss_pred Cccccccccccccc----cccCCcccccccccccccccccc----cccc-cccccccccccccccccccccccccccccc
Confidence 99999999643211 22344678999999999999887 4444 46667776543221
Q ss_pred --CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--------CHHHHHHHHhcCC-------
Q 024125 161 --VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--------NKEFVDKVIARTP------- 223 (272)
Q Consensus 161 --~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~------- 223 (272)
..+...|+.||.+.+.+++.+++.+ |+.+..+.|..+-.+....... ...+..+.....+
T Consensus 140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 216 (342)
T d2blla1 140 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGG 216 (342)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGS
T ss_pred ccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCC
Confidence 1223679999999999999999886 7888888876665543221110 0223333333222
Q ss_pred --CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 224 --LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 224 --~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
...+..++|+++++..++........|+.+++.+|
T Consensus 217 ~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~ 253 (342)
T d2blla1 217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP 253 (342)
T ss_dssp CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred CeeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence 22356899999999999875555556999999654
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.76 E-value=7.7e-18 Score=145.02 Aligned_cols=169 Identities=21% Similarity=0.176 Sum_probs=121.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
|+||||||+|+||++++++|+++|++|+++++.... .......-.....++.++.+|++|.++++.+++. .++
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~------~~~ 75 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE------YKI 75 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH------SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc------cCC
Confidence 799999999999999999999999999998753211 1111111111134677789999999999888864 369
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC---------------CC
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---------------HV 161 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~---------------~~ 161 (272)
|+|||+|+...... ..+..+..+.+|+.++.+++.++ ++.+..++|++||...+. +.
T Consensus 76 d~VihlAa~~~~~~----~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~ 147 (347)
T d1z45a2 76 DSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL 147 (347)
T ss_dssp CEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC
T ss_pred CEEEEccccccccc----cccCcccccccchhhhHHHHHHH----HhcccceEEeecceeeecCcccCCCCCccccccCC
Confidence 99999999642211 23344678889999999999887 344546899999965432 12
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCccc
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~ 201 (272)
.+...|+.+|.+.+.+++.+.+.. ..++.+..+.|+.+-
T Consensus 148 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~ 186 (347)
T d1z45a2 148 GPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPI 186 (347)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEE
T ss_pred CCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceE
Confidence 345679999999999998887653 446777777665443
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.75 E-value=2.5e-17 Score=140.50 Aligned_cols=221 Identities=17% Similarity=0.111 Sum_probs=140.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC--hHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRN--EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+||||||+|+||++++++|+++|++|+.+++- ...... ...+.. ..++.++.+|+++.+++.++++.. ++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~-~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~------~~ 73 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN-LHWLSS-LGNFEFVHGDIRNKNDVTRLITKY------MP 73 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHH-HHHHHT-TCCCEEEECCTTCHHHHHHHHHHH------CC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhH-HHHhhc-cCCcEEEEcccCCHHHHHHHHHhc------CC
Confidence 68999999999999999999999999998742 222222 222222 346788899999999998888754 68
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC----------------
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------------- 160 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~---------------- 160 (272)
|+|||+|+..... ...++.+..+++|+.|+.++++++ .+.+..+.++.||......
T Consensus 74 d~Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~ 145 (338)
T d1orra_ 74 DSCFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTC 145 (338)
T ss_dssp SEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEE
T ss_pred ceEEeeccccccc----ccccChHHHHHHHHHHHHHHHHhh----hcccccccccccccccccccccccccccccccccc
Confidence 9999999863221 123345788999999999999876 4444456666655432211
Q ss_pred ------------CCCChhhHHHHHHHHHHHHHHHHHHccCCeeE--EEeeCCcccChhhHhhhhCHHHHHHHHh-----c
Q 024125 161 ------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRT--NSVAPWYTKTSLVERLLENKEFVDKVIA-----R 221 (272)
Q Consensus 161 ------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v--~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----~ 221 (272)
..+...|+.+|...+.+.......+....+.+ ..+.+|........... ......... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 223 (338)
T d1orra_ 146 VDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWV--GWFCQKAVEIKNGIN 223 (338)
T ss_dssp TTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHH--HHHHHHHHHHHTTCC
T ss_pred cccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeecccccccccccc--chhhHHHHHHHhccC
Confidence 23457899999999999999888874332111 11112221111111110 111111111 1
Q ss_pred C---------CCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCC
Q 024125 222 T---------PLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 258 (272)
Q Consensus 222 ~---------~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG 258 (272)
. ....+..++|++++++.++... ....|+.+++.+|
T Consensus 224 ~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~ 268 (338)
T d1orra_ 224 KPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGT 268 (338)
T ss_dssp CCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSC
T ss_pred CceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCcccccccc
Confidence 1 1123456899999998877432 3356888888665
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.75 E-value=1.1e-17 Score=142.14 Aligned_cols=221 Identities=15% Similarity=0.039 Sum_probs=146.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH-HHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
|+||||||+|+||++++++|+++|++|+.++|...... ...+.+. ...++.++.+|++|.+++.+.+... ..
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~ 73 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------QP 73 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------CC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc------cc
Confidence 78999999999999999999999999999998643211 1111221 1236888999999999988877653 57
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CeEEEecCCCCC-----------CCCCCC
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGL-----------SHVGSG 164 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~ii~vsS~~~~-----------~~~~~~ 164 (272)
++++|+|+...... ..+.....++.|+.++.+++.++.. .+. .++++.||..-. .+..+.
T Consensus 74 ~~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~ 145 (321)
T d1rpna_ 74 QEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQ----FSPETRFYQASTSEMFGLIQAERQDENTPFYPR 145 (321)
T ss_dssp SEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHH----HCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred cccccccccccccc----cccchHHHHhhhhhchHHHHHHHHH----hCCCcccccccchhhcCcccCCCCCCCCCcccc
Confidence 88888887532211 1123567899999999998887733 332 466666664322 123456
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---HHHHHHHHh-cCC---------CCCCCCHH
Q 024125 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---KEFVDKVIA-RTP---------LQRVGEPE 231 (272)
Q Consensus 165 ~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~-~~~---------~~~~~~~~ 231 (272)
..|+.+|.+.+.+++.++.++ ++.+..+.|+.+..+........ .....+... ..+ ...+..++
T Consensus 146 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~ 222 (321)
T d1rpna_ 146 SPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG 222 (321)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred ChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeH
Confidence 889999999999999998886 67788888876555432110000 112222221 111 11356799
Q ss_pred HHHHHHHHHhcCCCCCccccEEEeCCCcC
Q 024125 232 EVASLVAYLCLPAASYITGQIISVDGGFT 260 (272)
Q Consensus 232 e~a~~~~~l~~~~~~~~~G~~i~~dgG~~ 260 (272)
|+++++..++... .+..+++.+|..
T Consensus 223 D~~~~~~~~~~~~----~~~~~ni~~~~~ 247 (321)
T d1rpna_ 223 DYVEAMWLMLQQD----KADDYVVATGVT 247 (321)
T ss_dssp HHHHHHHHHHHSS----SCCCEEECCSCE
T ss_pred HHHHHHHHHHhcC----CcCCceeccccc
Confidence 9999999887532 234566666643
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.74 E-value=3e-17 Score=142.04 Aligned_cols=220 Identities=12% Similarity=0.038 Sum_probs=152.6
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
-++++||||||+|+||++++++|.++|++|+++++..... .........+..+|+.+.+.+.+++ .
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~--------~ 78 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTEDMFCDEFHLVDLRVMENCLKVT--------E 78 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGGGTCSEEEECCTTSHHHHHHHH--------T
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhhcccCcEEEeechhHHHHHHHh--------h
Confidence 3788999999999999999999999999999998654321 0011123456778999988776655 4
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC--------------
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-------------- 160 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-------------- 160 (272)
.+|.|||+|+....... ..+.....+..|+.++.+++.++ .+.+..++|++||......
T Consensus 79 ~~d~Vih~a~~~~~~~~---~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~ 151 (363)
T d2c5aa1 79 GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNVSLKES 151 (363)
T ss_dssp TCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGG
T ss_pred cCCeEeecccccccccc---cccccccccccccchhhHHHHhH----HhhCccccccccccccccccccccccccccccc
Confidence 68999999986433211 12345678889999999888877 5566679999999665431
Q ss_pred ----CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--C---HHHHHHHHhcC---------
Q 024125 161 ----VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--N---KEFVDKVIART--------- 222 (272)
Q Consensus 161 ----~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--~---~~~~~~~~~~~--------- 222 (272)
..+...|+.+|.+.+.+++.+++++ ++++..+.|+.+..+....... . ...........
T Consensus 152 e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 228 (363)
T d2c5aa1 152 DAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL 228 (363)
T ss_dssp GGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSC
T ss_pred cCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCC
Confidence 2335679999999999999998886 7889999998776654211000 0 11111111111
Q ss_pred CCCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 223 PLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 223 ~~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
....+...+|+++.+..++.. ..|+.+++.+|..++
T Consensus 229 ~~rd~i~v~D~~~~~~~~~~~----~~~~~~ni~~~~~~s 264 (363)
T d2c5aa1 229 QTRSFTFIDECVEGVLRLTKS----DFREPVNIGSDEMVS 264 (363)
T ss_dssp CEECCEEHHHHHHHHHHHHHS----SCCSCEEECCCCCEE
T ss_pred eEEEEeehhHHHHHHHHHHhC----CCCCeEEEecCCccc
Confidence 123467789999999888742 246788888886654
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=7.2e-19 Score=149.55 Aligned_cols=215 Identities=13% Similarity=0.107 Sum_probs=141.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|+||||||+|.||++++++|+++|++|+.++|......+..... ....++.....|+.+. + + .++|
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~-----~-------~-~~~d 67 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEP-----L-------Y-IEVD 67 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTSC-----C-------C-CCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHHH-----H-------H-cCCC
Confidence 78999999999999999999999999999886322111111111 1122444444454321 1 1 3699
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC----------------CC
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----------------HV 161 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~----------------~~ 161 (272)
+|||+|+...... ..++..+.+++|+.++.++++++. +.+ .++|++||...+. +.
T Consensus 68 ~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~----~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~ 138 (312)
T d2b69a1 68 QIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAK----RVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI 138 (312)
T ss_dssp EEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHH----HHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred EEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHH----HcC-CcEEEEEChheecCCCCCCCCccccCCCCCC
Confidence 9999998643211 112346788999999999998773 334 4899999864432 12
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhh--CHHHHHHHHhcCCC---------CCCCCH
Q 024125 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLE--NKEFVDKVIARTPL---------QRVGEP 230 (272)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~~ 230 (272)
.+...|+.||.+.+.+++.+++++ |+.+..++|+.+-.+....... -+.++.+.....+. ..+...
T Consensus 139 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v 215 (312)
T d2b69a1 139 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYV 215 (312)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEH
Confidence 345789999999999999999886 7889999998887654321100 02333333333221 234568
Q ss_pred HHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 231 EEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 231 ~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
+|+++++..++... .+..+++.+|..+.
T Consensus 216 ~D~~~~~~~~~~~~----~~~~~n~~~~~~~~ 243 (312)
T d2b69a1 216 SDLVNGLVALMNSN----VSSPVNLGNPEEHT 243 (312)
T ss_dssp HHHHHHHHHHHTSS----CCSCEEESCCCEEE
T ss_pred HHHHHHHHHHHhhc----cCCceEecCCcccc
Confidence 99999998887432 35567887775543
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.74 E-value=2e-17 Score=141.00 Aligned_cols=221 Identities=17% Similarity=0.127 Sum_probs=151.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEE------EEeeCCh--HHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVV------HTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v------~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++||||||+|.||++++++|+++|+.| +..++.. ...... ..+ ....++.++..|.++........
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~-~~~-~~~~~~~~~~~d~~~~~~~~~~~---- 74 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APV-DADPRLRFVHGDIRDAGLLAREL---- 74 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGG-TTCTTEEEEECCTTCHHHHHHHT----
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHh-hhh-hcCCCeEEEEeccccchhhhccc----
Confidence 469999999999999999999999754 3333211 110111 111 12357888999999998765443
Q ss_pred HHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC---------
Q 024125 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--------- 160 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~--------- 160 (272)
..+|.++|+|+..... ...+..+..+++|+.++.++++++ .+.+..++|++||...+..
T Consensus 75 ----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~~~yg~~~~~~~~E~ 142 (322)
T d1r6da_ 75 ----RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTNQVYGSIDSGSWTES 142 (322)
T ss_dssp ----TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGCCCSSSCBCTT
T ss_pred ----cccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecceeecCCCCCCCCCC
Confidence 4789999999863222 133445678899999999998887 4455679999999765432
Q ss_pred --CCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCC---------CCCC
Q 024125 161 --VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ---------RVGE 229 (272)
Q Consensus 161 --~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 229 (272)
..+...|+.+|.+.+.+++.+++++ ++.+..+.|+.+-.+....-.--+.++.+.....+.. .+..
T Consensus 143 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~ 219 (322)
T d1r6da_ 143 SPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVH 219 (322)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEE
Confidence 3345789999999999999999886 7889999998876654211000123344444433321 2457
Q ss_pred HHHHHHHHHHHhcCCCCCccccEEEeCCCcCCC
Q 024125 230 PEEVASLVAYLCLPAASYITGQIISVDGGFTAN 262 (272)
Q Consensus 230 ~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~~~~ 262 (272)
++|+++++..++.... .|+.+++.+|-..+
T Consensus 220 v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s 249 (322)
T d1r6da_ 220 TDDHCRGIALVLAGGR---AGEIYHIGGGLELT 249 (322)
T ss_dssp HHHHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred HHHHHHHHHHHHhCCC---CCCeeEEeecccch
Confidence 9999999999885432 48899988775443
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.74 E-value=1.4e-16 Score=138.71 Aligned_cols=171 Identities=19% Similarity=0.175 Sum_probs=124.9
Q ss_pred CCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeC---------ChHHHHHHHHHHHhC--------CCeEEEEEecCCCH
Q 024125 17 GMTALVTGGTRGIGQATVEELAG-LGAVVHTCSR---------NEVELNKCLKEWQSK--------GFVVSGSVCDAASP 78 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~-~G~~v~~~~r---------~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~ 78 (272)
+++||||||+|+||++++++|++ .|++|+++++ ..+..++....+... ...+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 57899999999999999999986 6899999874 112223333333221 24577889999999
Q ss_pred HHHHHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCC
Q 024125 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL 158 (272)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~ 158 (272)
+.++++++.. .++|+|+|+|+...... ..+.....+++|+.++.+++.++ ++.+..++++++|....
T Consensus 82 ~~l~~~~~~~-----~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~----~~~~~~~~~~~~s~~~~ 148 (383)
T d1gy8a_ 82 DFLNGVFTRH-----GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF 148 (383)
T ss_dssp HHHHHHHHHS-----CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT
T ss_pred HHhhhhhhcc-----ceeehhhcccccccccc----cccccccccccccccccccchhh----hccCCcccccccccccc
Confidence 9988888654 56899999999643221 22345678889999999988877 45555677777665432
Q ss_pred C------------------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccCh
Q 024125 159 S------------------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (272)
Q Consensus 159 ~------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~ 203 (272)
. ...+...|+.+|.+.+.+++.+.+.+ |+.+.+++|+.+-.+
T Consensus 149 ~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~ 208 (383)
T d1gy8a_ 149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGA 208 (383)
T ss_dssp BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECC
T ss_pred cccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeecc
Confidence 2 12345789999999999999998876 788888888766543
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.73 E-value=1.3e-17 Score=143.57 Aligned_cols=218 Identities=17% Similarity=0.101 Sum_probs=141.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC--hHHHHHHHHHHH-hCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN--EVELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~--~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
-|+||||||+|.||++++++|+++|++|.+++++ ..... ...+. ....++.++.+|++|.+.+..++
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~--~~~~~~~~~~~i~~~~~Di~d~~~~~~~~-------- 71 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAILGDRVELVVGDIADAELVDKLA-------- 71 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGGCSSSEEEEECCTTCHHHHHHHH--------
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc--HHHHHHhhcCCeEEEEccCCCHHHHHHHH--------
Confidence 4889999999999999999999999864443322 11000 00011 12357888999999999887776
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC--------------
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-------------- 159 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-------------- 159 (272)
...|.++|+|+...... ..++....+++|+.++.+++..+.. .+ .++|++||...+.
T Consensus 72 ~~~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~~~----~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~ 142 (346)
T d1oc2a_ 72 AKADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAARK----YD-IRFHHVSTDEVYGDLPLREDLPGHGEG 142 (346)
T ss_dssp TTCSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred hhhhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhhcc----cc-ccccccccceEecccCccccccccccC
Confidence 36788999998643211 2234467889999999999887633 23 4677776654331
Q ss_pred ---------CCCCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcCC-------
Q 024125 160 ---------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIARTP------- 223 (272)
Q Consensus 160 ---------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------- 223 (272)
+..+...|+.+|.+.+.+++.++++. ++++..+.|+.+..+....-......+.......+
T Consensus 143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g 219 (346)
T d1oc2a_ 143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEG 219 (346)
T ss_dssp TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTS
T ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCC
Confidence 12234679999999999999998875 89999999987766432110000122222222222
Q ss_pred --CCCCCCHHHHHHHHHHHhcCCCCCccccEEEeCCCc
Q 024125 224 --LQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGF 259 (272)
Q Consensus 224 --~~~~~~~~e~a~~~~~l~~~~~~~~~G~~i~~dgG~ 259 (272)
...+...+|++++++.++... ..|..+++.+|.
T Consensus 220 ~~~r~~i~v~D~a~a~~~~~~~~---~~~~~~~~~~~~ 254 (346)
T d1oc2a_ 220 KNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADG 254 (346)
T ss_dssp CCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSC
T ss_pred CccccccchhhHHHHHHHHHhhc---ccCccccccccc
Confidence 224567899999998877432 225555555543
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=5.8e-17 Score=129.34 Aligned_cols=196 Identities=14% Similarity=0.069 Sum_probs=130.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
..|+|+||||||+||++++++|+++|++|.++.|+.+++... ....+.++.+|++|.+++.+++ ..
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al--------~~ 67 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTV--------AG 67 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHH--------TT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHh--------cC
Confidence 358899999999999999999999999999999998774322 1235677899999999987776 46
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCC----ChhhHHHH
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS----GSIYGATK 171 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~----~~~Y~~sK 171 (272)
.|++||++|...... .. +++..++.+ +++.+++.+..++|++||......... ...|...|
T Consensus 68 ~d~vi~~~g~~~~~~--~~---------~~~~~~~~~----l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~ 132 (205)
T d1hdoa_ 68 QDAVIVLLGTRNDLS--PT---------TVMSEGARN----IVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDH 132 (205)
T ss_dssp CSEEEECCCCTTCCS--CC---------CHHHHHHHH----HHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHH
T ss_pred CCEEEEEeccCCchh--hh---------hhhHHHHHH----HHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHH
Confidence 899999998643221 11 123334433 344557777789999998765433322 23455566
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH-hhhhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCCCCccc
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE-RLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITG 250 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~~~~~~~~G 250 (272)
...+.+. ...+++...|.||.+...-.. ...- .........+.+.+|+|+.++..+... ...|
T Consensus 133 ~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~DvA~~~~~~l~~~--~~~g 196 (205)
T d1hdoa_ 133 IRMHKVL-------RESGLKYVAVMPPHIGDQPLTGAYTV-------TLDGRGPSRVISKHDLGHFMLRCLTTD--EYDG 196 (205)
T ss_dssp HHHHHHH-------HHTCSEEEEECCSEEECCCCCSCCEE-------ESSSCSSCSEEEHHHHHHHHHHTTSCS--TTTT
T ss_pred HHHHHHH-------HhcCCceEEEecceecCCCCcccEEE-------eeCCCCCCCcCCHHHHHHHHHHHhCCC--CCCC
Confidence 5555433 346899999999977432211 1000 000112233468999999999888542 3558
Q ss_pred cEEEeC
Q 024125 251 QIISVD 256 (272)
Q Consensus 251 ~~i~~d 256 (272)
+.+.+-
T Consensus 197 ~~~~~s 202 (205)
T d1hdoa_ 197 HSTYPS 202 (205)
T ss_dssp CEEEEE
T ss_pred EEEecC
Confidence 887653
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.71 E-value=8.2e-17 Score=136.43 Aligned_cols=151 Identities=11% Similarity=0.098 Sum_probs=117.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
-|+||||||+|.||++++++|+++|+.|+++++.. .+|+.+.+.+..+++. ..+
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~------~~~ 55 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFAS------ERI 55 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHH------HCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhh------cCC
Confidence 37899999999999999999999999888776543 2589999988887753 369
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC---------------
Q 024125 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--------------- 161 (272)
Q Consensus 97 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~--------------- 161 (272)
|.++|+|+...... .......+.+++|+.++.+++.++ .+.+..++|++||...+.+.
T Consensus 56 d~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~ 128 (315)
T d1e6ua_ 56 DQVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL 128 (315)
T ss_dssp SEEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred CEEEEcchhccccc---cchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence 99999997532211 123345567889999999988877 44555689999997754321
Q ss_pred -CCChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccCh
Q 024125 162 -GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (272)
Q Consensus 162 -~~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~ 203 (272)
++...|+.||.+.|.+++.++++. |+++..+.|+.+-.|
T Consensus 129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp 168 (315)
T d1e6ua_ 129 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGP 168 (315)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEST
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECC
Confidence 123469999999999999998876 789999999877654
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.68 E-value=3.4e-16 Score=134.62 Aligned_cols=214 Identities=17% Similarity=0.104 Sum_probs=145.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++||+||||||+|.||++++++|+++|++|+.++|+......+.+... ....+.++.+|++|.+.+.++++..
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~~------ 78 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF------ 78 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH------
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-cccCCeEEEeeccChHhhhhhhhhc------
Confidence 679999999999999999999999999999999998765544443322 2235778899999999988877653
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC------------CCC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------HVG 162 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~------------~~~ 162 (272)
.+|+++|+|+..... .+.+..+..+++|+.++.+++.++... .....++..||..... +..
T Consensus 79 ~~~~v~~~aa~~~~~----~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 151 (356)
T d1rkxa_ 79 QPEIVFHMAAQPLVR----LSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG 151 (356)
T ss_dssp CCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred hhhhhhhhhcccccc----ccccCCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccccC
Confidence 699999999863221 133456788999999999988887431 2224555555433221 233
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHcc------CCeeEEEeeCCcccChhhHhhhh-CHHHHHHHHhcCC--------CCCC
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAK------DNIRTNSVAPWYTKTSLVERLLE-NKEFVDKVIARTP--------LQRV 227 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~------~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~--------~~~~ 227 (272)
+...|+.+|.+.+.+++.++.++.. .++.+..+.|+.+..+-...... .+..........+ ...+
T Consensus 152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 231 (356)
T d1rkxa_ 152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW 231 (356)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccc
Confidence 4577999999999999999887643 36788888887665433110000 0122222222211 1223
Q ss_pred CCHHHHHHHHHHHhc
Q 024125 228 GEPEEVASLVAYLCL 242 (272)
Q Consensus 228 ~~~~e~a~~~~~l~~ 242 (272)
..++|++.++..++.
T Consensus 232 ~~v~D~~~a~~~~~~ 246 (356)
T d1rkxa_ 232 QHVLEPLSGYLLLAQ 246 (356)
T ss_dssp EETHHHHHHHHHHHH
T ss_pred cccccccchhhhhhh
Confidence 457889988776664
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=2.1e-15 Score=122.46 Aligned_cols=197 Identities=14% Similarity=0.130 Sum_probs=133.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+.+++|+||||||||.||++++++|+++|. +|++++|++...... ....+....+|+.+.+++.+.+
T Consensus 10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~~~~i~~~~~D~~~~~~~~~~~----- 78 (232)
T d2bkaa1 10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------AYKNVNQEVVDFEKLDDYASAF----- 78 (232)
T ss_dssp HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------GGGGCEEEECCGGGGGGGGGGG-----
T ss_pred hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------ccceeeeeeecccccccccccc-----
Confidence 345789999999999999999999999996 799999876432211 1124556667887766554333
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
...|+++||+|.. ..........++|+.++.++++++ .+.+..++|++|+....... ...|+.+
T Consensus 79 ---~~~d~vi~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~~~~~--~~~Y~~~ 142 (232)
T d2bkaa1 79 ---QGHDVGFCCLGTT-------RGKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKSS--NFLYLQV 142 (232)
T ss_dssp ---SSCSEEEECCCCC-------HHHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTTC--SSHHHHH
T ss_pred ---ccccccccccccc-------ccccchhhhhhhcccccceeeecc----cccCccccccCCccccccCc--cchhHHH
Confidence 4689999999852 122345667888999999888876 45666789999998765433 4579999
Q ss_pred HHHHHHHHHHHHHHHccCCe-eEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCC----CCCCCHHHHHHHHHHHhcCC
Q 024125 171 KAAMNQLTRNLACEWAKDNI-RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPL----QRVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~e~a~~~~~l~~~~ 244 (272)
|...+...+. .+. ++..++||.+..+...... ............+. ....+++|+|++++.++...
T Consensus 143 K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~ 213 (232)
T d2bkaa1 143 KGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRP 213 (232)
T ss_dssp HHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred HHHhhhcccc-------ccccceEEecCceeecCCCcCcH-HHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcC
Confidence 9988865432 243 5778899998876533211 11122222222222 12356799999988777533
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.60 E-value=1.2e-15 Score=123.53 Aligned_cols=212 Identities=15% Similarity=0.070 Sum_probs=134.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++||||||+|+||++++++|+++|+ .|+...|++++.... ..++..+.+|+++.++..+++ ..
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~--------~~ 68 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAF--------QG 68 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHH--------TT
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-------cCCcEEEEeeecccccccccc--------cc
Confidence 7999999999999999999999996 466677887654322 235667889999999987776 46
Q ss_pred ccEEEECCCCCCCCCC---------CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChh
Q 024125 96 LNILVNNVGTNIRKPT---------IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (272)
Q Consensus 96 id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~ 166 (272)
+|.+||+++....... .............+|+.++.+++... .....+...+.++.....+..+...
T Consensus 69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~~~~~~~~ 144 (252)
T d2q46a1 69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA----KVAGVKHIVVVGSMGGTNPDHPLNK 144 (252)
T ss_dssp CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHH----HHHTCSEEEEEEETTTTCTTCGGGG
T ss_pred ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccc----ccccccccccccccccCCCCccccc
Confidence 8999999985322110 11111234556678999988777655 3334467888887666554444333
Q ss_pred hHHHHHHHHHH-HHHHHHHHccCCeeEEEeeCCcccChhhHhh---hhCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Q 024125 167 YGATKAAMNQL-TRNLACEWAKDNIRTNSVAPWYTKTSLVERL---LENKEFVDKVIARTPLQRVGEPEEVASLVAYLCL 242 (272)
Q Consensus 167 Y~~sK~a~~~~-~~~la~el~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~~ 242 (272)
+..++...... ...+ ....++++..++||.+..+..... ....... ......+.+++|+|++++.++.
T Consensus 145 ~~~~~~~~~~~~~~~~---~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-----~~~~~~~i~~~Dva~a~~~~l~ 216 (252)
T d2q46a1 145 LGNGNILVWKRKAEQY---LADSGTPYTIIRAGGLLDKEGGVRELLVGKDDEL-----LQTDTKTVPRADVAEVCIQALL 216 (252)
T ss_dssp GGGCCHHHHHHHHHHH---HHHSSSCEEEEEECEEECSCTTSSCEEEESTTGG-----GGSSCCEEEHHHHHHHHHHHTT
T ss_pred ccccchhhhhhhhhhh---hhcccccceeecceEEECCCcchhhhhhccCccc-----ccCCCCeEEHHHHHHHHHHHhC
Confidence 33333322222 2222 233589999999998866543211 0000000 0112235578999999998885
Q ss_pred CCCCCccccEEEeCCC
Q 024125 243 PAASYITGQIISVDGG 258 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG 258 (272)
.. ...|+.+++-++
T Consensus 217 ~~--~~~g~~~~i~~~ 230 (252)
T d2q46a1 217 FE--EAKNKAFDLGSK 230 (252)
T ss_dssp CG--GGTTEEEEEEEC
T ss_pred Cc--cccCcEEEEeeC
Confidence 43 346899988653
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.43 E-value=1.7e-12 Score=107.32 Aligned_cols=194 Identities=19% Similarity=0.177 Sum_probs=126.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++||||||+|.||++++++|.++|++|+.++|+. .|++|.++++++++.. ++|
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~------~~d 54 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK------KPN 54 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc------CCC
Confidence 4699999999999999999999999999998753 5899999988888653 689
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CCCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~~~~~~ 166 (272)
+|||+|+..... ......+..+..|+.....+...... .. ..+++.||..... ...+...
T Consensus 55 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~----~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~ 125 (281)
T d1vl0a_ 55 VVINCAAHTAVD----KCEEQYDLAYKINAIGPKNLAAAAYS----VG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSA 125 (281)
T ss_dssp EEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred EEEeeccccccc----cccccchhhccccccccccccccccc----cc-ccccccccceeeeccccccccccccccchhh
Confidence 999999863211 12233456677788777776665533 22 3566666543211 2345577
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHHHHHHHhcC-------CCCCCCCHHHHHHHHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEFVDKVIART-------PLQRVGEPEEVASLVAY 239 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~e~a~~~~~ 239 (272)
|+.+|...+.+.+. . +.+...+.|+.+..+-.... ........... ....+..++|+++++..
T Consensus 126 ~~~~k~~~e~~~~~----~---~~~~~i~R~~~vyG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~ 195 (281)
T d1vl0a_ 126 YGKTKLEGENFVKA----L---NPKYYIVRTAWLYGDGNNFV---KTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLK 195 (281)
T ss_dssp HHHHHHHHHHHHHH----H---CSSEEEEEECSEESSSSCHH---HHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHH----h---CCCccccceeEEeCCCcccc---cchhhhhccCCceeecCCceeccchhhhhhhhhhh
Confidence 99999888776543 2 56677889988765432111 12222222221 12245679999999998
Q ss_pred HhcCCCCCccccEEEeCCCcCC
Q 024125 240 LCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 240 l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
++... .+| .+++.++-.+
T Consensus 196 ~~~~~---~~g-~~~~~~~~~~ 213 (281)
T d1vl0a_ 196 VIDEK---NYG-TFHCTCKGIC 213 (281)
T ss_dssp HHHHT---CCE-EEECCCBSCE
T ss_pred hhhhc---ccC-ceeEeCCCcc
Confidence 88432 234 5555555433
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.40 E-value=4e-13 Score=107.05 Aligned_cols=187 Identities=16% Similarity=0.158 Sum_probs=117.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|+||||||||.||++++++|+++|+ +|+...|+... ...++ ..+..|..++. +....
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~~---~~~~~d~~~~~-------~~~~~ 61 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRL---DNPVGPLAELL-------PQLDG 61 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTE---ECCBSCHHHHG-------GGCCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hcccc---cccccchhhhh-------hcccc
Confidence 48999999999999999999999997 67767765321 01122 33444444332 22225
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~a~ 174 (272)
.+|.+|+|+|..... ...-+...++|+.++.++++++ ++.+..+++++||..+.. .....|..+|...
T Consensus 62 ~~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~ 129 (212)
T d2a35a1 62 SIDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADA--KSSIFYNRVKGEL 129 (212)
T ss_dssp CCSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSHHHHHHHHH
T ss_pred chheeeeeeeeeccc------cccccccccchhhhhhhccccc----cccccccccccccccccc--ccccchhHHHHHH
Confidence 689999999853111 1122467888999998888876 666778999999977643 3446799999887
Q ss_pred HHHHHHHHHHHccCCe-eEEEeeCCcccChhhHhhhhCHHHHHHHHhcCCCC--CCCCHHHHHHHHHHHhcCC
Q 024125 175 NQLTRNLACEWAKDNI-RTNSVAPWYTKTSLVERLLENKEFVDKVIARTPLQ--RVGEPEEVASLVAYLCLPA 244 (272)
Q Consensus 175 ~~~~~~la~el~~~~i-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~e~a~~~~~l~~~~ 244 (272)
|.+.+ ..+. ++..++|+.+..+....... ............+ .....+|+|++++.++...
T Consensus 130 E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~ 193 (212)
T d2a35a1 130 EQALQ-------EQGWPQLTIARPSLLFGPREEFRLA--EILAAPIARILPGKYHGIEACDLARALWRLALEE 193 (212)
T ss_dssp HHHHT-------TSCCSEEEEEECCSEESTTSCEEGG--GGTTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhcc-------ccccccceeeCCcceeCCcccccHH--HHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence 76543 2343 57788999886654211000 0000000000000 1136789999999988543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.38 E-value=7.3e-13 Score=110.21 Aligned_cols=130 Identities=17% Similarity=0.191 Sum_probs=93.3
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++||||||+|.||++++++|.++|..|.+..|+.+ +..|++|.+.++++++.. ++|
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~------~~D 56 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE------------------FCGDFSNPKGVAETVRKL------RPD 56 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSS------------------SCCCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCCcc------------------ccCcCCCHHHHHHHHHHc------CCC
Confidence 46999999999999999999998865554433321 247999999988888654 699
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CCCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~~~~~~ 166 (272)
+|||+||...... +.+..+..+++|+.++..+..++ ++. ..+++++||..... +..+...
T Consensus 57 ~Vih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~ 127 (298)
T d1n2sa_ 57 VIVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAA----NET-GAWVVHYSTDYVFPGTGDIPWQETDATSPLNV 127 (298)
T ss_dssp EEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHH----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred EEEEecccccccc----cccCccccccccccccccchhhh----hcc-ccccccccccccccCCCCCCCccccccCCCch
Confidence 9999999643221 12233578899999998888876 333 35788887754322 2334578
Q ss_pred hHHHHHHHHHHHHH
Q 024125 167 YGATKAAMNQLTRN 180 (272)
Q Consensus 167 Y~~sK~a~~~~~~~ 180 (272)
|+.+|.+.+.+.+.
T Consensus 128 y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 128 YGKTKLAGEKALQD 141 (298)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HhhhhhhhhhhHHh
Confidence 99999988876543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.28 E-value=7.5e-12 Score=104.51 Aligned_cols=203 Identities=13% Similarity=0.058 Sum_probs=116.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHH----HHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL----NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++||||||||.||++++++|+++|++|+++.|+.... .+....+. ...+.++.+|++|.+++.+.+
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~-------- 73 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDAL-------- 73 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHH--------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhc--------
Confidence 4699999999999999999999999999998864321 12222222 235677899999999887766
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC-----CCCChhhH
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----VGSGSIYG 168 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~-----~~~~~~Y~ 168 (272)
...+.++++++..... .|..+...++.++ .+....++++.||...... ..+...|.
T Consensus 74 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~ 134 (312)
T d1qyda_ 74 KQVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSITF 134 (312)
T ss_dssp TTCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred cCcchhhhhhhhcccc---------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhhhh
Confidence 4678888888753221 1222333333433 4445567777777543321 22233445
Q ss_pred HHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC-------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Q 024125 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN-------KEFVDKVIARTPLQRVGEPEEVASLVAYLC 241 (272)
Q Consensus 169 ~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~a~~~~~l~ 241 (272)
.+|..++. +.. ..++.+..+.|+.+..+........ .+...-.........+..++|+|++++.++
T Consensus 135 ~~~~~~~~----~~~---~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l 207 (312)
T d1qyda_ 135 IDKRKVRR----AIE---AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI 207 (312)
T ss_dssp HHHHHHHH----HHH---HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred HHHHHHHH----hhc---ccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHh
Confidence 55544433 322 3477788888987754332211100 000000000011123467999999999888
Q ss_pred cCCCCCccccEE-EeCCC
Q 024125 242 LPAASYITGQII-SVDGG 258 (272)
Q Consensus 242 ~~~~~~~~G~~i-~~dgG 258 (272)
... ...|+.+ .+.++
T Consensus 208 ~~~--~~~~~~~~~~~~~ 223 (312)
T d1qyda_ 208 DDP--QTLNKTMYIRPPM 223 (312)
T ss_dssp TCG--GGSSSEEECCCGG
T ss_pred cCc--cccCceEEEeCCC
Confidence 542 2234443 44444
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.24 E-value=1.7e-11 Score=101.63 Aligned_cols=191 Identities=13% Similarity=0.082 Sum_probs=113.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH-----HHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-----KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
-|+||||||||.||++++++|+++|++|++++|+..... .....+. ...+.++.+|+.+.....+.++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~----- 75 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK----- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhh-----
Confidence 478999999999999999999999999999998643321 1122222 2346677899999988766663
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHH
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK 171 (272)
..+.++++++.. +..+...+.++. ...+...+++.||............+...+
T Consensus 76 ---~~~~vi~~~~~~-------------------~~~~~~~~~~a~----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 129 (307)
T d1qyca_ 76 ---NVDVVISTVGSL-------------------QIESQVNIIKAI----KEVGTVKRFFPSEFGNDVDNVHAVEPAKSV 129 (307)
T ss_dssp ---TCSEEEECCCGG-------------------GSGGGHHHHHHH----HHHCCCSEEECSCCSSCTTSCCCCTTHHHH
T ss_pred ---hceeeeeccccc-------------------ccchhhHHHHHH----HHhccccceeeecccccccccccccccccc
Confidence 578899988742 112222233333 333445777777765444333333444444
Q ss_pred HHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhCHHH------HHHHHhcCCCCCCCCHHHHHHHHHHHhcC
Q 024125 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLENKEF------VDKVIARTPLQRVGEPEEVASLVAYLCLP 243 (272)
Q Consensus 172 ~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~e~a~~~~~l~~~ 243 (272)
.........+..+ .++.+..+.|+.+..+....+...... ............+..++|+|++++.++..
T Consensus 130 ~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 204 (307)
T d1qyca_ 130 FEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD 204 (307)
T ss_dssp HHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSC
T ss_pred ccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcC
Confidence 4443333333333 377888899988765543221110000 00000011122346799999999988853
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.21 E-value=2.7e-11 Score=100.81 Aligned_cols=213 Identities=12% Similarity=0.139 Sum_probs=118.7
Q ss_pred EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH-cCCCcc
Q 024125 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK-FNGKLN 97 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~id 97 (272)
||||||+|+||++++++|+++|+ +|+++++-....+ ... +.+. ..+|..+.+.. .+..... ....++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~~~-~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~~ 70 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVN-LVDL------NIADYMDKEDF---LIQIMAGEEFGDVE 70 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHH-HHTS------CCSEEEEHHHH---HHHHHTTCCCSSCC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-hhc-cccc------chhhhccchHH---HHHHhhhhcccchh
Confidence 89999999999999999999997 6887763222111 111 1111 11233333332 2222221 114688
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC-----------CCCCChh
Q 024125 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (272)
Q Consensus 98 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~-----------~~~~~~~ 166 (272)
+++|.|+...... . ..+...+.|+.+...++.++. ..+. ++++.||..... ...+...
T Consensus 71 ~i~~~aa~~~~~~---~---~~~~~~~~~~~~~~~~l~~~~----~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~ 139 (307)
T d1eq2a_ 71 AIFHEGACSSTTE---W---DGKYMMDNNYQYSKELLHYCL----EREI-PFLYASSAATYGGRTSDFIESREYEKPLNV 139 (307)
T ss_dssp EEEECCSCCCTTC---C---CHHHHHHHTHHHHHHHHHHHH----HHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred hhhhhcccccccc---c---ccccccccccccccccccccc----cccc-cccccccccccccccccccccccccccccc
Confidence 9999997532221 1 234566777888887777653 3333 344444433221 1345578
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChhhH--hhhhC--HHHHHHHHh----------cCCCCCCCCHHH
Q 024125 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE--RLLEN--KEFVDKVIA----------RTPLQRVGEPEE 232 (272)
Q Consensus 167 Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~--~~~~~--~~~~~~~~~----------~~~~~~~~~~~e 232 (272)
|+.+|.+.+.+++.++.+. ++.+..+.|..+..+... ..... ......... ......+..++|
T Consensus 140 Y~~~K~~~e~~~~~~~~~~---~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d 216 (307)
T d1eq2a_ 140 YGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD 216 (307)
T ss_dssp HHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred cccccchhhhhcccccccc---ccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeeccc
Confidence 9999999999998876664 566776776655443211 00000 011111111 112234556889
Q ss_pred HHHHHHHHhcCCCCCccccEEEeCCCcCC
Q 024125 233 VASLVAYLCLPAASYITGQIISVDGGFTA 261 (272)
Q Consensus 233 ~a~~~~~l~~~~~~~~~G~~i~~dgG~~~ 261 (272)
+++++..++... ....+++.+|...
T Consensus 217 ~~~~~~~~~~~~----~~~~~~~~~~~~~ 241 (307)
T d1eq2a_ 217 VADVNLWFLENG----VSGIFNLGTGRAE 241 (307)
T ss_dssp HHHHHHHHHHHC----CCEEEEESCSCCB
T ss_pred HHHHHHHHhhhc----cccccccccccch
Confidence 999998777532 1346777776544
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.19 E-value=3.7e-11 Score=102.55 Aligned_cols=205 Identities=14% Similarity=0.034 Sum_probs=121.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHH-HHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR-EKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~~~ 94 (272)
+.|+|+||||||.||++++++|+++|++|+++.|+..+... +.+.. ...+.++.+|+.|..+. +.++ .
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~-~~~v~~~~gD~~d~~~~~~~a~--------~ 70 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-IPNVTLFQGPLLNNVPLMDTLF--------E 70 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-STTEEEEESCCTTCHHHHHHHH--------T
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc-cCCCEEEEeeCCCcHHHHHHHh--------c
Confidence 56899999999999999999999999999999998665432 12222 23577889999986553 3332 4
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCC--CCCCChhhHHHHH
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--HVGSGSIYGATKA 172 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~--~~~~~~~Y~~sK~ 172 (272)
..|.++++...... . |+....+++.++ .+.+..+++..||..... +......|..+|.
T Consensus 71 ~~~~~~~~~~~~~~------~----------~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~ 130 (350)
T d1xgka_ 71 GAHLAFINTTSQAG------D----------EIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF 130 (350)
T ss_dssp TCSEEEECCCSTTS------C----------HHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred CCceEEeecccccc------h----------hhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhhHH
Confidence 67888776543111 1 222233344443 444556777788765432 2333456778887
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeCCcccChhhHhhhhC---HHHHHH-HHhcCCC-C----CCCC-HHHHHHHHHHHhc
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERLLEN---KEFVDK-VIARTPL-Q----RVGE-PEEVASLVAYLCL 242 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~~~~~~~~---~~~~~~-~~~~~~~-~----~~~~-~~e~a~~~~~l~~ 242 (272)
..+.+.+ ..++....+.|+.+........... ...... .....+. + .+.+ .+|+++.+..++.
T Consensus 131 ~~~~~~~-------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~ 203 (350)
T d1xgka_ 131 TVENYVR-------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFK 203 (350)
T ss_dssp HHHHHHH-------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHH-------hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHh
Confidence 7665443 2357788888887654332111100 000000 0000010 0 0122 4789999988885
Q ss_pred CCCCCccccEEEeCCC
Q 024125 243 PAASYITGQIISVDGG 258 (272)
Q Consensus 243 ~~~~~~~G~~i~~dgG 258 (272)
+......|+.+.+.|.
T Consensus 204 ~~~~~~~G~~~~~~g~ 219 (350)
T d1xgka_ 204 DGPQKWNGHRIALTFE 219 (350)
T ss_dssp HCHHHHTTCEEEECSE
T ss_pred CChhhcCCeEEEEeCC
Confidence 4444567898888764
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.07 E-value=4e-15 Score=117.13 Aligned_cols=171 Identities=14% Similarity=0.120 Sum_probs=91.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEE--------------EecCCCHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS--------------VCDAASPDQREK 83 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~--------------~~D~~~~~~~~~ 83 (272)
+++.|+||+|++|+++|+.|+++|++|++.+|++++++++.+++.......... ...........
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAID- 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHH-
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccch-
Confidence 357788888999999999999999999999999999999888876432111111 11111112221
Q ss_pred HHHHHHHHcCCCccEEEEC-CCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCC
Q 024125 84 LIQEVGSKFNGKLNILVNN-VGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG 162 (272)
Q Consensus 84 ~~~~~~~~~~~~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~ 162 (272)
......... .......+ ........ ..+......+.+...+.+........+++.|.....+..
T Consensus 80 ~~~~~~~~~--~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (212)
T d1jaya_ 80 TARDLKNIL--REKIVVSPLVPVSRGAK-------------GFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLD 144 (212)
T ss_dssp HHHHTHHHH--TTSEEEECCCCEECCTT-------------CCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTT
T ss_pred HHHHhhhhh--ccccccccccccccccc-------------cccccccchhhhhhhhhhhhhcccccceeecHHHhcCcc
Confidence 111111111 11111111 11100000 000000000112222233333323333334433333444
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHccCCeeEEEeeCCcccChh
Q 024125 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (272)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~la~el~~~~i~v~~v~PG~v~t~~ 204 (272)
....|..++++....++..+.++..+.+.++.+.||.+++..
T Consensus 145 ~~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a~ 186 (212)
T d1jaya_ 145 EKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSR 186 (212)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHH
T ss_pred cccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHHH
Confidence 455667777777777777777776667888899999887644
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.28 E-value=3.5e-06 Score=64.42 Aligned_cols=86 Identities=20% Similarity=0.229 Sum_probs=64.5
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHH---HHHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK---EWQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
..++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.+..++... .+.... .......|+.+.+++....
T Consensus 13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~-- 88 (182)
T d1vi2a1 13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEAL-- 88 (182)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHH--
T ss_pred CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhh--
Confidence 35789999999999 6999999999999998 78999998766655443 333332 2334467888888775554
Q ss_pred HHHHcCCCccEEEECCCCCC
Q 024125 88 VGSKFNGKLNILVNNVGTNI 107 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~ 107 (272)
...|+|||+.....
T Consensus 89 ------~~~diiIN~Tp~G~ 102 (182)
T d1vi2a1 89 ------ASADILTNGTKVGM 102 (182)
T ss_dssp ------HTCSEEEECSSTTS
T ss_pred ------cccceeccccCCcc
Confidence 36899999987643
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=98.25 E-value=1.4e-05 Score=60.11 Aligned_cols=83 Identities=25% Similarity=0.321 Sum_probs=57.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.+|+|+| +|++|...++.+...|++|+++++++++++..++ .+...... .|.. .++.....+++.+..+..
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga~~~~~-~~~~-~~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADVTLV-VDPA-KEEESSIIERIRSAIGDL 98 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEEE-CCTT-TSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCCcEEEe-cccc-ccccchhhhhhhcccccC
Confidence 478999997 6899999999888899999999999988765543 23332222 2221 222333455565566557
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|.++|.
T Consensus 99 ~D~vid~~g~ 108 (170)
T d1e3ja2 99 PNVTIDCSGN 108 (170)
T ss_dssp CSEEEECSCC
T ss_pred CceeeecCCC
Confidence 9999999984
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.23 E-value=3.6e-06 Score=64.30 Aligned_cols=79 Identities=16% Similarity=0.184 Sum_probs=55.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.+|||+||+|++|.+.++-....|++|+.+++++++.+.++ +.+....+..-|....+.+ .+.. .+..
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~~Ga~~vi~~~~~~~~~~~---~~~~---~~~G 98 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QIGFDAAFNYKTVNSLEEA---LKKA---SPDG 98 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEEEETTSCSCHHHH---HHHH---CTTC
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----hhhhhhhcccccccHHHHH---HHHh---hcCC
Confidence 5899999999999999999988889999999999887755443 3344433333333333332 2222 1246
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++++.|
T Consensus 99 vd~v~D~vG 107 (182)
T d1v3va2 99 YDCYFDNVG 107 (182)
T ss_dssp EEEEEESSC
T ss_pred CceeEEecC
Confidence 999999998
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.11 E-value=7.5e-06 Score=61.74 Aligned_cols=75 Identities=13% Similarity=0.118 Sum_probs=56.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++|+|+|.|| |.+|+.+|+.|+++|++|++++|+.++.+++.+.+ ........+..+.......+ ..
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i--------~~ 67 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEV--------AK 67 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHH--------TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhh--------hc
Confidence 3699999987 99999999999999999999999999888776543 23444455666666655554 35
Q ss_pred ccEEEECC
Q 024125 96 LNILVNNV 103 (272)
Q Consensus 96 id~li~~a 103 (272)
.|.++.+.
T Consensus 68 ~~~~i~~~ 75 (182)
T d1e5qa1 68 HDLVISLI 75 (182)
T ss_dssp SSEEEECS
T ss_pred cceeEeec
Confidence 67776554
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.09 E-value=6.7e-06 Score=61.36 Aligned_cols=73 Identities=18% Similarity=0.241 Sum_probs=56.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
+++++++||.|+ |++|+.++++|..+|+ ++.++.|+.++.+++.+++. ..+ .++ +++.+.+
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~~~----~~~---~~~~~~l------- 82 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA----VRF---DELVDHL------- 82 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE----CCG---GGHHHHH-------
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---ccc----ccc---hhHHHHh-------
Confidence 588999999998 9999999999999998 79999999999888887763 221 122 2333333
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
...|+||++.+.
T Consensus 83 -~~~Divi~atss 94 (159)
T d1gpja2 83 -ARSDVVVSATAA 94 (159)
T ss_dssp -HTCSEEEECCSS
T ss_pred -ccCCEEEEecCC
Confidence 368999999885
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=1.3e-05 Score=60.46 Aligned_cols=78 Identities=17% Similarity=0.289 Sum_probs=59.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+++||+|||.|+ ||.+++++..|.+.|.+++++.|+.++.+++.+.+.... .+.....| +. ..
T Consensus 14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~~~--~~------------~~ 77 (170)
T d1nyta1 14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALSMD--EL------------EG 77 (170)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSG--GG------------TT
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-cccccccc--cc------------cc
Confidence 5678999999997 788999999999999999999999999998888776543 22222221 11 01
Q ss_pred CCCccEEEECCCCCC
Q 024125 93 NGKLNILVNNVGTNI 107 (272)
Q Consensus 93 ~~~id~li~~ag~~~ 107 (272)
...|++||+.....
T Consensus 78 -~~~dliIN~Tp~G~ 91 (170)
T d1nyta1 78 -HEFDLIINATSSGI 91 (170)
T ss_dssp -CCCSEEEECCSCGG
T ss_pred -cccceeecccccCc
Confidence 46899999987643
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.00 E-value=1.4e-05 Score=60.41 Aligned_cols=78 Identities=15% Similarity=0.245 Sum_probs=54.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (272)
.|.+|||+||+|++|...++.....|++|+.+++++++.+..+ +.+..-. .|.++.+-.+ ++.+..+ .
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~----~~Ga~~v---i~~~~~~~~~----~i~~~t~~~ 96 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----QNGAHEV---FNHREVNYID----KIKKYVGEK 96 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEE---EETTSTTHHH----HHHHHHCTT
T ss_pred CCCEEEEEeccccccccccccccccCccccccccccccccccc----ccCcccc---cccccccHHH----HhhhhhccC
Confidence 5889999999999999999988889999999998877655443 3343322 3555544333 3332222 3
Q ss_pred CccEEEECCC
Q 024125 95 KLNILVNNVG 104 (272)
Q Consensus 95 ~id~li~~ag 104 (272)
.+|+++.+.|
T Consensus 97 g~d~v~d~~g 106 (174)
T d1yb5a2 97 GIDIIIEMLA 106 (174)
T ss_dssp CEEEEEESCH
T ss_pred CceEEeeccc
Confidence 5999999887
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.95 E-value=5.1e-05 Score=57.07 Aligned_cols=81 Identities=12% Similarity=0.233 Sum_probs=59.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++++|+|+|.|+ ||.+++++..|.+.+.+|+++.|+.++.+.+.+.+.... .+.....|... .
T Consensus 14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~~--------------~ 77 (171)
T d1p77a1 14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSIP--------------L 77 (171)
T ss_dssp CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGCC--------------C
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhcccc--------------c
Confidence 4678999999987 788999999999988899999999999999988876543 34444433210 1
Q ss_pred CCCccEEEECCCCCCCCC
Q 024125 93 NGKLNILVNNVGTNIRKP 110 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~ 110 (272)
...|++||+........
T Consensus 78 -~~~diiIN~tp~g~~~~ 94 (171)
T d1p77a1 78 -QTYDLVINATSAGLSGG 94 (171)
T ss_dssp -SCCSEEEECCCC-----
T ss_pred -cccceeeeccccccccc
Confidence 46899999988754433
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.94 E-value=4.8e-05 Score=57.08 Aligned_cols=81 Identities=23% Similarity=0.280 Sum_probs=57.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|+|.|+ |++|...++.+...|+ +|+++++++++++..+ + .+... .+..+-.+..+.. +.+....+.
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~---~Ga~~-~~~~~~~~~~~~~---~~~~~~~g~ 96 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E---IGADL-VLQISKESPQEIA---RKVEGQLGC 96 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---TTCSE-EEECSSCCHHHHH---HHHHHHHTS
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-H---hCCcc-ccccccccccccc---ccccccCCC
Confidence 4678999987 9999999999988999 7999999998877543 2 23332 2333444454443 333334445
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.+.|.
T Consensus 97 g~Dvvid~~G~ 107 (171)
T d1pl8a2 97 KPEVTIECTGA 107 (171)
T ss_dssp CCSEEEECSCC
T ss_pred CceEEEeccCC
Confidence 79999999984
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.92 E-value=1.2e-05 Score=61.68 Aligned_cols=87 Identities=18% Similarity=0.205 Sum_probs=59.7
Q ss_pred CCEEEE-eCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 17 GMTALV-TGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 17 ~k~vlI-tGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
|.+++| +||+|++|.+.++-....|++|+.+.|+.+..++..+.+++.+....+. .|..+..+..+.+.++.+..++.
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g~~ 107 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSGGE 107 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhccCC
Confidence 555555 7999999999998877789999999888877777777776666554332 22212223333444554444467
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++++.|
T Consensus 108 vdvv~D~vg 116 (189)
T d1gu7a2 108 AKLALNCVG 116 (189)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999999987
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.91 E-value=2.5e-05 Score=59.12 Aligned_cols=80 Identities=21% Similarity=0.266 Sum_probs=56.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+||+|++|..+++-....|++|+.+++++++.+..++ + +..- ..|.++++-.+++ .++.+ +..
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l---Ga~~---vi~~~~~d~~~~v-~~~t~--g~g 97 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERL-KEITG--GKK 97 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHH-HHHTT--TCC
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c---CCeE---EEECCCCCHHHHH-HHHhC--CCC
Confidence 48899999999999999999888889999999999988766543 2 3332 2355554322222 22211 235
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|+++.+.|.
T Consensus 98 ~d~v~d~~g~ 107 (179)
T d1qora2 98 VRVVYDSVGR 107 (179)
T ss_dssp EEEEEECSCG
T ss_pred eEEEEeCccH
Confidence 8999999974
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.87 E-value=2.2e-05 Score=59.62 Aligned_cols=78 Identities=21% Similarity=0.259 Sum_probs=54.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (272)
+|++|||+||+|++|...++.....|++|+++++++++.+.+ ++.+.... .|..+.+- .+++.+..+ .
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~Ga~~v---i~~~~~~~----~~~v~~~t~~~ 93 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEYV---GDSRSVDF----ADEILELTDGY 93 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSEE---EETTCSTH----HHHHHHHTTTC
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc----cccccccc---ccCCccCH----HHHHHHHhCCC
Confidence 478999999999999999998888899999999888765433 33444432 24444332 233333332 3
Q ss_pred CccEEEECCC
Q 024125 95 KLNILVNNVG 104 (272)
Q Consensus 95 ~id~li~~ag 104 (272)
.+|+++.+.|
T Consensus 94 g~d~v~d~~g 103 (183)
T d1pqwa_ 94 GVDVVLNSLA 103 (183)
T ss_dssp CEEEEEECCC
T ss_pred CEEEEEeccc
Confidence 5999999998
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.86 E-value=2.8e-05 Score=55.85 Aligned_cols=74 Identities=14% Similarity=0.075 Sum_probs=57.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
++|+|.|+ |.+|+.+++.|.++|++|++++++++..+++.+++ ...++..|.++++.++++- . ...|
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~------i-~~a~ 67 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG------I-EDAD 67 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT------T-TTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC------h-hhhh
Confidence 47899997 99999999999999999999999998887765432 3456789999998665442 1 4578
Q ss_pred EEEECCC
Q 024125 98 ILVNNVG 104 (272)
Q Consensus 98 ~li~~ag 104 (272)
.++....
T Consensus 68 ~vv~~t~ 74 (132)
T d1lssa_ 68 MYIAVTG 74 (132)
T ss_dssp EEEECCS
T ss_pred hhcccCC
Confidence 8876543
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.83 E-value=2e-05 Score=50.98 Aligned_cols=43 Identities=28% Similarity=0.305 Sum_probs=37.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
++.++||+||+||+|...++.+...|++|+.+.+++++.+.+.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~ 73 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK 73 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 5889999999999999999988888999999999888766543
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.77 E-value=9.2e-05 Score=56.07 Aligned_cols=81 Identities=19% Similarity=0.202 Sum_probs=54.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC-
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN- 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 93 (272)
.|.+|||+|+ |++|...++.+...|+ +|+++++++++++... + .+.... +...-.+..+.. +++.+...
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v-i~~~~~~~~~~~---~~i~~~~~~ 98 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E---IGADLT-LNRRETSVEERR---KAIMDITHG 98 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H---TTCSEE-EETTTSCHHHHH---HHHHHHTTT
T ss_pred CCCEEEEECC-Cccchhheecccccccccccccccccccccccc-c---ccceEE-EeccccchHHHH---HHHHHhhCC
Confidence 5899999997 8999999998888998 8999999998876443 2 233322 222223333333 33333322
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
..+|++|.+.|.
T Consensus 99 ~g~Dvvid~vG~ 110 (182)
T d1vj0a2 99 RGADFILEATGD 110 (182)
T ss_dssp SCEEEEEECSSC
T ss_pred CCceEEeecCCc
Confidence 249999999985
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.74 E-value=0.00011 Score=53.65 Aligned_cols=111 Identities=9% Similarity=0.046 Sum_probs=67.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.+++.|.|+ |.+|..+|..|+.+| .+|+++++++++.+....++... .........|. ++
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~----------- 69 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD----------- 69 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG-----------
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH-----------
Confidence 568888896 999999999999988 48999999998877666566532 22223334443 11
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEec
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFIS 153 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vs 153 (272)
. ...|+++.+||..... .++-.+.+..|+.- .+.+.+.+.+. +.+.++++|
T Consensus 70 ~-~~adivvitag~~~~~------g~~r~~l~~~N~~i----~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 70 C-KDADLVVITAGAPQKP------GESRLDLVNKNLNI----LSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp G-TTCSEEEECCCC----------------CHHHHHHH----HHHHHHHHHHTTCCSEEEECS
T ss_pred h-ccccEEEEecccccCC------CCCHHHHHHHHHHH----HHHHHHHHhhcCCCcEEEEeC
Confidence 1 4689999999963221 12223445556443 34555555554 445666666
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.73 E-value=3.5e-05 Score=58.32 Aligned_cols=106 Identities=21% Similarity=0.192 Sum_probs=68.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+|.+|||+||+||+|...++-....|++|+.+++++++.+... +.+.+... |-++. ..+.+. ...+++
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~lGa~~vi---~~~~~--~~~~~~---~~~~~g 98 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKEVL---AREDV--MAERIR---PLDKQR 98 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSEEE---ECC--------------CCSCC
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hcccceee---ecchh--HHHHHH---HhhccC
Confidence 5889999999999999999988889999999999888765443 33444332 22211 111221 112357
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV 161 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~ 161 (272)
+|+++.+.|.. . +...+..++. .|+++.++...+....
T Consensus 99 vD~vid~vgg~--------~------------------~~~~l~~l~~--~Griv~~G~~~g~~~~ 136 (176)
T d1xa0a2 99 WAAAVDPVGGR--------T------------------LATVLSRMRY--GGAVAVSGLTGGAEVP 136 (176)
T ss_dssp EEEEEECSTTT--------T------------------HHHHHHTEEE--EEEEEECSCCSSSCCC
T ss_pred cCEEEEcCCch--------h------------------HHHHHHHhCC--CceEEEeecccCcccC
Confidence 99999999841 1 1233344443 4899999987665543
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.67 E-value=0.00035 Score=50.73 Aligned_cols=115 Identities=17% Similarity=0.105 Sum_probs=67.7
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhCCC--eEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGF--VVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++.|+||+|.+|+++|..++.+|. ++++++.++.+.+. .++..... ..... .. ..+..+.+ .
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~~~~~~~~-~~---~~~~~~~~--------~ 67 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIETRATVKGY-LG---PEQLPDCL--------K 67 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSSSCEEEEE-ES---GGGHHHHH--------T
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhhhcCCCeE-Ec---CCChHHHh--------C
Confidence 688999999999999999998886 79999987654332 23432211 11111 11 12222222 4
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 95 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
..|++|..||...... .+ -.+.++.|+.-.-.+.+.+.++ .+.+.++.+|.+.
T Consensus 68 ~aDivVitag~~~~~g---~s---R~~ll~~N~~i~~~i~~~i~~~---~p~~iiivvtNPv 120 (144)
T d1mlda1 68 GCDVVVIPAGVPRKPG---MT---RDDLFNTNATIVATLTAACAQH---CPDAMICIISNPV 120 (144)
T ss_dssp TCSEEEECCSCCCCTT---CC---GGGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCH
T ss_pred CCCEEEECCCcCCCCC---CC---cchHHHHHHHHHHHHHHHHHhc---CCCeEEEEecCch
Confidence 6999999999632221 11 1235666665554444444332 3457788877543
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.65 E-value=0.0001 Score=55.27 Aligned_cols=74 Identities=20% Similarity=0.251 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|++|||+||+|++|...++.....|++|+.+++++++.+..+ +.+.+..+ |..+. .+++.+ +..
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~----~lGa~~~i---~~~~~------~~~~~~--~~g 91 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAEEAA---TYAEV------PERAKA--WGG 91 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCSEEE---EGGGH------HHHHHH--TTS
T ss_pred CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc----ccccceee---ehhhh------hhhhhc--ccc
Confidence 6899999999999999999988888999999998887765443 23333222 33221 122222 246
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
+|+++.+.|
T Consensus 92 ~D~v~d~~G 100 (171)
T d1iz0a2 92 LDLVLEVRG 100 (171)
T ss_dssp EEEEEECSC
T ss_pred ccccccccc
Confidence 999999876
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.64 E-value=0.0014 Score=48.30 Aligned_cols=119 Identities=14% Similarity=0.100 Sum_probs=76.3
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKL 84 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~ 84 (272)
++..+..++|.|.|+ |.+|.+++..++.+|. ++++++++++..+....++.+. ......-..|. +++
T Consensus 14 ~~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~---~~~--- 86 (160)
T d1i0za1 14 EEATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY---SVT--- 86 (160)
T ss_dssp SCCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG---GGG---
T ss_pred ccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch---hhc---
Confidence 345566788999996 9999999999999986 8999999988887666666542 22222222222 221
Q ss_pred HHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCC
Q 024125 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSV 155 (272)
Q Consensus 85 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~ 155 (272)
..-|++|..||...... .+. ...+..|+. +.+.+.+.+.+. +.+.++++|..
T Consensus 87 ---------~~adiVVitAg~~~~~g---~tR---~~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtNP 139 (160)
T d1i0za1 87 ---------ANSKIVVVTAGVRQQEG---ESR---LNLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSNP 139 (160)
T ss_dssp ---------TTCSEEEECCSCCCCTT---CCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECSSS
T ss_pred ---------ccccEEEEecCCccccC---cch---HHHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCCc
Confidence 46899999999742221 111 233444443 445666665553 45777887753
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.61 E-value=0.00054 Score=49.74 Aligned_cols=112 Identities=13% Similarity=0.072 Sum_probs=65.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChH--HHHHHHHHHHh----CCC--eEEEEEecCCCHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV--ELNKCLKEWQS----KGF--VVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~--~~~~~~~~~~~----~~~--~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.+|.|+||+|.+|.+++..++.+|. +++++++++. +.+....++.+ ... ++.....+ +.++
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~~------- 71 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLRI------- 71 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGGG-------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHHH-------
Confidence 3689999999999999999999984 8999998753 34434444432 122 33222221 2211
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEec
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFIS 153 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vs 153 (272)
+ ...|++|.+||...... .+. ...++.|..=. +.+.+.+.+.....|+.+|
T Consensus 72 ----l-~~aDvVVitAG~~~~~g---~sR---~dl~~~Na~iv----~~i~~~i~~~~~~~iivVt 122 (145)
T d1hyea1 72 ----I-DESDVVIITSGVPRKEG---MSR---MDLAKTNAKIV----GKYAKKIAEICDTKIFVIT 122 (145)
T ss_dssp ----G-TTCSEEEECCSCCCCTT---CCH---HHHHHHHHHHH----HHHHHHHHHHCCCEEEECS
T ss_pred ----h-ccceEEEEecccccCCC---CCh---hhhhhhhHHHH----HHHHHHHhccCCCeEEEEc
Confidence 1 46899999999732211 232 24555565444 4444444444334555454
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.58 E-value=0.00095 Score=48.56 Aligned_cols=115 Identities=17% Similarity=0.128 Sum_probs=72.0
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
-.+++|.|.|+ |.+|.+++..++.+|. +++++++++++.+....++.+. ...+.....|. ++
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~-------- 71 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD-------- 71 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG--------
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH--------
Confidence 35678999997 9999999999999875 7999999998877666666532 22333333332 11
Q ss_pred HHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecCC
Q 024125 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSV 155 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS~ 155 (272)
+ ...|++|.++|...... +... +.+..|.. +.+.+.+.+.+ .+.+.++++|-+
T Consensus 72 ---l-~daDvvvitag~~~~~~--~~R~----dl~~~N~~----i~~~i~~~i~~~~p~a~~ivvtNP 125 (148)
T d1ldna1 72 ---C-RDADLVVICAGANQKPG--ETRL----DLVDKNIA----IFRSIVESVMASGFQGLFLVATNP 125 (148)
T ss_dssp ---T-TTCSEEEECCSCCCCTT--TCSG----GGHHHHHH----HHHHHHHHHHHHTCCSEEEECSSS
T ss_pred ---h-ccceeEEEecccccccC--cchh----HHHHHHHH----HHHHHHHHHHhhCCCceEEEecCc
Confidence 1 46899999999743221 1111 23344433 33444444444 345777877643
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.57 E-value=8.6e-05 Score=56.56 Aligned_cols=79 Identities=19% Similarity=0.233 Sum_probs=51.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++++|||+||+||+|...++-....|++ |+.+++++++..++.+++ +.... .|.++++ ..+.++++ .+.
T Consensus 30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~v---i~~~~~~-~~~~~~~~---~~~ 99 (187)
T d1vj1a2 30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAA---VNYKTGN-VAEQLREA---CPG 99 (187)
T ss_dssp SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEE---EETTSSC-HHHHHHHH---CTT
T ss_pred CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEE---eeccchh-HHHHHHHH---hcc
Confidence 3489999999999999999987778985 555677777666655443 33322 2333332 22223333 234
Q ss_pred CccEEEECCC
Q 024125 95 KLNILVNNVG 104 (272)
Q Consensus 95 ~id~li~~ag 104 (272)
.+|+++.+.|
T Consensus 100 GvDvv~D~vG 109 (187)
T d1vj1a2 100 GVDVYFDNVG 109 (187)
T ss_dssp CEEEEEESSC
T ss_pred CceEEEecCC
Confidence 6999999998
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.55 E-value=0.00025 Score=52.87 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=40.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~ 61 (272)
++|+|||.|+ ||.+++++..|.+.|. ++.++.|+.++.+.+.+.+
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~ 61 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 61 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence 5789999988 8999999999999997 7999999999988887665
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.50 E-value=0.0016 Score=47.89 Aligned_cols=115 Identities=12% Similarity=0.093 Sum_probs=72.0
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.++..+|.|.|+ |.+|..+|..++.+|. ++++++++++..+....++.+. +........|. ++
T Consensus 16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~~------- 84 (159)
T d2ldxa1 16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---NV------- 84 (159)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---GG-------
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---hh-------
Confidence 345567888896 9999999999999875 7999999998887776667643 22222222232 21
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecC
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISS 154 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS 154 (272)
. ...|++|..||......-... ..++.|+. +.+.+.+.+.+ .+.+.++++|.
T Consensus 85 ----~-~~adivvitag~~~~~~~~R~------dll~~N~~----i~~~i~~~i~~~~p~~ivivvtN 137 (159)
T d2ldxa1 85 ----S-ANSKLVIITAGARMVSGQTRL------DLLQRNVA----IMKAIVPGVIQNSPDCKIIVVTN 137 (159)
T ss_dssp ----G-TTEEEEEECCSCCCCTTTCSS------CTTHHHHH----HHHHHTTTHHHHSTTCEEEECSS
T ss_pred ----h-ccccEEEEecccccCCCCCHH------HHHHHHHH----HHHHHHHHHhccCCCeEEEEeCC
Confidence 1 468999999997433221111 12333433 34455555554 34577777775
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.45 E-value=0.00034 Score=54.69 Aligned_cols=81 Identities=20% Similarity=0.162 Sum_probs=54.4
Q ss_pred CCCCCCEEEEeCCC----------------ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCC
Q 024125 13 WSLKGMTALVTGGT----------------RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76 (272)
Q Consensus 13 ~~l~~k~vlItGa~----------------~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~ 76 (272)
.+|+|++||||+|. |..|.+||+++..+|++|.++.-.... .....+..+ .+.
T Consensus 2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~--~~~ 70 (223)
T d1u7za_ 2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRV--DVM 70 (223)
T ss_dssp CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEE--ECC
T ss_pred cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccc--eeh
Confidence 37899999999885 899999999999999999876543211 001123322 344
Q ss_pred CHHHHHHHHHHHHHHcCCCccEEEECCCCCCC
Q 024125 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIR 108 (272)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 108 (272)
..++....+ .+.+ ...|++|++|++...
T Consensus 71 t~~~m~~~~---~~~~-~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 71 TALEMEAAV---NASV-QQQNIFIGCAAVADY 98 (223)
T ss_dssp SHHHHHHHH---HHHG-GGCSEEEECCBCCSE
T ss_pred hhHHHHHHH---Hhhh-ccceeEeeeechhhh
Confidence 445444333 3344 468999999997543
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.44 E-value=0.00031 Score=52.36 Aligned_cols=80 Identities=14% Similarity=0.158 Sum_probs=55.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.+.+|+|+|++|++|..+++.+...|. +|+++++++++.+..++ + +.... .|.++.+-.++..+.. .++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~---Ga~~~---i~~~~~~~~~~~~~~~---~~~ 96 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A---GADYV---INASMQDPLAEIRRIT---ESK 96 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHHHT---TTS
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c---CCcee---eccCCcCHHHHHHHHh---hcc
Confidence 578999999999999999998888885 89999999887665543 2 33322 2333333333333221 224
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|+++.|+|.
T Consensus 97 ~~d~vid~~g~ 107 (170)
T d1jvba2 97 GVDAVIDLNNS 107 (170)
T ss_dssp CEEEEEESCCC
T ss_pred cchhhhccccc
Confidence 59999999984
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=97.43 E-value=0.0014 Score=48.88 Aligned_cols=78 Identities=14% Similarity=0.210 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|+|.|+ |++|...++.+...|+. |+++++++++++..++ + +.. .+ .|.++.+ . .+++.+..++
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~-~---Ga~-~~--i~~~~~~-~---~~~i~~~t~g 95 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-L---GAT-HV--INSKTQD-P---VAAIKEITDG 95 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-H---TCS-EE--EETTTSC-H---HHHHHHHTTS
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH-c---CCe-EE--EeCCCcC-H---HHHHHHHcCC
Confidence 5789999997 89999999988888885 5667788877665443 3 222 22 2343322 2 2233333335
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.|.|.
T Consensus 96 g~D~vid~~G~ 106 (174)
T d1f8fa2 96 GVNFALESTGS 106 (174)
T ss_dssp CEEEEEECSCC
T ss_pred CCcEEEEcCCc
Confidence 79999999984
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.41 E-value=0.0016 Score=47.59 Aligned_cols=114 Identities=10% Similarity=0.035 Sum_probs=66.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC---------EEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA---------VVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~---------~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.+|.|+||+|.+|++++..|+..+. +++...++.+..+....++.... ..+......-.+.++ +
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-- 78 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA----F-- 78 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH----T--
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh----c--
Confidence 4899999999999999999987653 23334556666666655555432 223323322222221 1
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CC-CCeEEEec
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SG-VGSIVFIS 153 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~-~g~ii~vs 153 (272)
...|++|.++|..... ..+. ++.+..|+.- .+.+.+.+.+ .+ .+.|+.+|
T Consensus 79 ------~~advViitaG~~~~p---g~~r---~dl~~~N~~i----~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 79 ------KDADYALLVGAAPRKA---GMER---RDLLQVNGKI----FTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp ------TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHH----HHHHHHHHHHHSCTTCEEEECS
T ss_pred ------ccccEEEeecCcCCCC---CCcH---HHHHHHHHHH----HHHHHHHHHHhCCCCcEEEEec
Confidence 5799999999974221 1233 2344555443 4555555555 23 35566665
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.36 E-value=0.00015 Score=51.89 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=54.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|.++|.|. |-+|+++++.|.++|..|++++.+++..+++. ..+. ..+..|.++++.++++- . .+.|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~~--~~~~gd~~~~~~l~~a~------i-~~a~ 66 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYAT--HAVIANATEENELLSLG------I-RNFE 66 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTCS--EEEECCTTCTTHHHHHT------G-GGCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhCC--cceeeecccchhhhccC------C-cccc
Confidence 56777766 79999999999999999999999998877654 2233 34568999987665441 1 3578
Q ss_pred EEEECCC
Q 024125 98 ILVNNVG 104 (272)
Q Consensus 98 ~li~~ag 104 (272)
.+|.+.+
T Consensus 67 ~vi~~~~ 73 (134)
T d2hmva1 67 YVIVAIG 73 (134)
T ss_dssp EEEECCC
T ss_pred EEEEEcC
Confidence 8876665
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.31 E-value=0.0016 Score=47.16 Aligned_cols=115 Identities=17% Similarity=0.109 Sum_probs=69.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
|+|.|+|+ |.+|..++..++.+|. +++++++++++.+....++.+. .........| .+++
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l---------- 67 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL---------- 67 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence 67888995 8999999999999884 8999999998877665555432 2222322333 2221
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS 154 (272)
..-|++|.+||...... +-.-.+-...++.|. .+.+.+.+.+.+. +.+.++++|-
T Consensus 68 --~~adiVVitaG~~~~~~--~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN 123 (146)
T d1hyha1 68 --ADADVVISTLGNIKLQQ--DNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISN 123 (146)
T ss_dssp --TTCSEEEECCSCGGGTC---------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred --ccccEEEEecccccccc--ccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecC
Confidence 46899999999632111 000111122334443 4445666666654 4467777764
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.30 E-value=0.0016 Score=47.64 Aligned_cols=120 Identities=12% Similarity=-0.032 Sum_probs=69.8
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
-+.+++.|.|+ |.+|..++..++.++. ++++++.++++.+....++... +........ ++.++ .+
T Consensus 5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~~---~~---- 74 (154)
T d1pzga1 5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYEA---AL---- 74 (154)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHHH---HH----
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cchhh---hh----
Confidence 35678888997 9999999998888885 8999999887776665555431 222222111 12211 12
Q ss_pred HHcCCCccEEEECCCCCCCCC--CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecCC
Q 024125 90 SKFNGKLNILVNNVGTNIRKP--TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSV 155 (272)
Q Consensus 90 ~~~~~~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS~ 155 (272)
...|+++.++|...... -...+. ...+..|..-. +.+++.+.+ .+.+.++++|..
T Consensus 75 ----~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~iv----~~i~~~i~~~~p~aiviivsNP 132 (154)
T d1pzga1 75 ----TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKII----REIGQNIKKYCPKTFIIVVTNP 132 (154)
T ss_dssp ----TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHH----HHHHHHHHHHCTTCEEEECCSS
T ss_pred ----cCCCeEEEecccccCCCCCCcccch---hhhhhhhHHHH----HHHHHHHHhcCCCcEEEEeCCc
Confidence 46899999999742211 011121 22344454443 444444444 345677777743
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.26 E-value=0.0014 Score=48.63 Aligned_cols=76 Identities=17% Similarity=0.149 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.+|+|.|+ |++|...++.+...|++|+++++++++++...+ + +....+...+..+. .+ ...+.
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-l---Ga~~~i~~~~~~~~------~~----~~~~~ 91 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M---GADHYIATLEEGDW------GE----KYFDT 91 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEEEEGGGTSCH------HH----HSCSC
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-c---CCcEEeeccchHHH------HH----hhhcc
Confidence 5889999987 899999888777789999999999888765432 2 33332222222211 11 12256
Q ss_pred ccEEEECCCCC
Q 024125 96 LNILVNNVGTN 106 (272)
Q Consensus 96 id~li~~ag~~ 106 (272)
.|+++.+.+..
T Consensus 92 ~d~vi~~~~~~ 102 (168)
T d1piwa2 92 FDLIVVCASSL 102 (168)
T ss_dssp EEEEEECCSCS
T ss_pred cceEEEEecCC
Confidence 99999998753
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.0067 Score=43.66 Aligned_cols=116 Identities=14% Similarity=0.084 Sum_probs=67.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHH-CC--CEEEEeeCChHHHHHHHHHHHhCCCeEEE-EEecCCCHHHHHHHHHHHHHHcC
Q 024125 18 MTALVTGGTRGIGQATVEELAG-LG--AVVHTCSRNEVELNKCLKEWQSKGFVVSG-SVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~-~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
.+|.|+|++|.+|.+++..|+. .+ .++.+.+..+ ..+...-++......... ......+.+++
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~------------ 67 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPAL------------ 67 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHHH------------
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcccc------------
Confidence 3688999999999999998864 34 5899999764 344444455443221111 12223333322
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCCC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~~ 156 (272)
..-|++|.+||...... .+ -.+.++.|..-. +.+.+.+.+. +.+.++++|.+.
T Consensus 68 ~~aDvvvitaG~~~k~g---~~---R~dl~~~N~~i~----~~v~~~i~~~~p~aivivvtNPv 121 (145)
T d2cmda1 68 EGADVVLISAGVRRKPG---MD---RSDLFNVNAGIV----KNLVQQVAKTCPKACIGIITNPV 121 (145)
T ss_dssp TTCSEEEECCSCCCCTT---CC---GGGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSSSH
T ss_pred CCCCEEEECCCccCCCC---cc---hhhHHHHHHHHH----HHHHHHHHhhCCCcEEEEccCCc
Confidence 46899999999742221 12 123455664444 4444444443 456788887543
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.25 E-value=0.00048 Score=51.64 Aligned_cols=78 Identities=14% Similarity=0.119 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|+|.|+ |++|...++.....|+ +|+.+++++++++...+ + +... + .|.++.+.. +++.+..++
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-l---Ga~~-~--i~~~~~~~~----~~v~~~t~g 94 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-Y---GATD-I--LNYKNGHIE----DQVMKLTNG 94 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-H---TCSE-E--ECGGGSCHH----HHHHHHTTT
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh-h---Cccc-c--ccccchhHH----HHHHHHhhc
Confidence 4788999986 8999999998888898 79999999888665542 2 2222 2 233332222 222222223
Q ss_pred -CccEEEECCCC
Q 024125 95 -KLNILVNNVGT 105 (272)
Q Consensus 95 -~id~li~~ag~ 105 (272)
.+|++|.|+|.
T Consensus 95 ~G~D~vid~~g~ 106 (174)
T d1jqba2 95 KGVDRVIMAGGG 106 (174)
T ss_dssp SCEEEEEECSSC
T ss_pred cCcceEEEccCC
Confidence 49999999984
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.23 E-value=0.00014 Score=54.40 Aligned_cols=78 Identities=22% Similarity=0.144 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+.+|||+||+||+|...++.....|++|+.+.+++++.+.+.+. +....... ++. ..+.+....+++
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l----Gad~vi~~------~~~--~~~~~~~~~~~g 90 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL----GASEVISR------EDV--YDGTLKALSKQQ 90 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH----TCSEEEEH------HHH--CSSCCCSSCCCC
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh----cccceEec------cch--hchhhhcccCCC
Confidence 467899999999999999987777799999999988876655432 33332211 110 011111112346
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|+++.+.|.
T Consensus 91 vd~vid~vgg 100 (167)
T d1tt7a2 91 WQGAVDPVGG 100 (167)
T ss_dssp EEEEEESCCT
T ss_pred ceEEEecCcH
Confidence 9999999884
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.22 E-value=0.0059 Score=43.76 Aligned_cols=111 Identities=14% Similarity=0.043 Sum_probs=67.0
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++.|+|+ |.+|.+++..++.+|. ++++++.++++.+....++... .........+ +.++ +
T Consensus 2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~ 67 (142)
T d1guza1 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T 67 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence 5778896 8999999999999984 8999999988776555444322 2233333222 2222 1
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISS 154 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS 154 (272)
...|+++.+||...... .+. ...++.|..=. +.+.+.+.+ .+.+.++++|-
T Consensus 68 -~dadvvvitag~~~~~g---~~r---~~l~~~N~~i~----~~i~~~i~~~~p~aivivvtN 119 (142)
T d1guza1 68 -ANSDIVIITAGLPRKPG---MTR---EDLLMKNAGIV----KEVTDNIMKHSKNPIIIVVSN 119 (142)
T ss_dssp -TTCSEEEECCSCCCCTT---CCH---HHHHHHHHHHH----HHHHHHHHHHCSSCEEEECCS
T ss_pred -cCCeEEEEEEecCCCCC---Cch---HHHHHHHHHHH----HHHHHHhhccCCCeEEEEecC
Confidence 46899999999733221 121 23444554444 344444443 34567777764
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.21 E-value=0.00027 Score=53.27 Aligned_cols=103 Identities=19% Similarity=0.203 Sum_probs=65.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+.++||+||+||+|...++-....|++|+.+++++++.+.+. ++ +.+..+..-|... . +.+. ...
T Consensus 31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~l---Gad~vi~~~~~~~---~----~~l~---~~~ 96 (177)
T d1o89a2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SL---GASRVLPRDEFAE---S----RPLE---KQV 96 (177)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HH---TEEEEEEGGGSSS---C----CSSC---CCC
T ss_pred CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hh---ccccccccccHHH---H----HHHH---hhc
Confidence 4568999999999999999988888999999999988865443 33 3333222212111 1 1111 134
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCC
Q 024125 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH 160 (272)
Q Consensus 96 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~ 160 (272)
.|.++.+.|. + + +...++.++. .|+++.++...+...
T Consensus 97 ~~~vvD~Vgg-----------~----~-----------~~~~l~~l~~--~Griv~~G~~~~~~~ 133 (177)
T d1o89a2 97 WAGAIDTVGD-----------K----V-----------LAKVLAQMNY--GGCVAACGLAGGFTL 133 (177)
T ss_dssp EEEEEESSCH-----------H----H-----------HHHHHHTEEE--EEEEEECCCTTCSCC
T ss_pred CCeeEEEcch-----------H----H-----------HHHHHHHhcc--ccceEeecccCCccc
Confidence 7888888862 1 1 2344444433 489999988776543
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.20 E-value=0.0052 Score=44.10 Aligned_cols=111 Identities=12% Similarity=-0.008 Sum_probs=68.1
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCC--hHHHHHHHHHHHh---CCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRN--EVELNKCLKEWQS---KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~--~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
+|.|+|++|.+|.++|..++.++. ++++++.+ ++..+....++.+ ..........|. ++
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----------- 67 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED----------- 67 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence 688999999999999999999986 79999853 4444433334432 223333333332 21
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCeEEEecC
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISS 154 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~ii~vsS 154 (272)
. ..-|+++..||.... +- .+ -.+.++.|. .+.+.+.+.+.+.. .+.++.+|.
T Consensus 68 ~-~~aDiVvitaG~~~~-~g--~~---R~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvtN 120 (142)
T d1o6za1 68 T-AGSDVVVITAGIPRQ-PG--QT---RIDLAGDNA----PIMEDIQSSLDEHNDDYISLTTSN 120 (142)
T ss_dssp G-TTCSEEEECCCCCCC-TT--CC---HHHHHHHHH----HHHHHHHHHHHTTCSCCEEEECCS
T ss_pred h-hhcCEEEEecccccc-cC--Cc---hhhHHHHHH----HHHHHHHHHHHhcCCCceEEEecC
Confidence 1 468999999996322 21 12 234555554 34466666666653 467777764
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.19 E-value=0.0014 Score=48.85 Aligned_cols=80 Identities=20% Similarity=0.259 Sum_probs=53.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|||.|+ +|+|...+..+...|+ +|+.+++++++.+...+ .+..-.+...|.. +.+.+..+.. .++
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~----~Ga~~~i~~~~~~--~~~~~~~~~~---~~~ 97 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGATECVNPQDYK--KPIQEVLTEM---SNG 97 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSEEECGGGCS--SCHHHHHHHH---TTS
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH----hCCeeEEecCCch--hHHHHHHHHH---hcC
Confidence 5789999999 6899999999999986 89999999988765442 2333222222222 2233333332 224
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.+.|.
T Consensus 98 G~D~vid~~G~ 108 (176)
T d2jhfa2 98 GVDFSFEVIGR 108 (176)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEecCCc
Confidence 69999999984
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.17 E-value=0.0019 Score=47.63 Aligned_cols=42 Identities=19% Similarity=0.310 Sum_probs=36.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
.|.+|+|.|+ |++|...++.+...|++|+.+++++++++..+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~ 68 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR 68 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh
Confidence 4789999886 99999999988888999999999988876443
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.16 E-value=0.0019 Score=48.31 Aligned_cols=80 Identities=20% Similarity=0.277 Sum_probs=54.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|+|+|+ ||+|...++.+...|+ +|+.+++++++++..++. +....+..-|..+. .+.+.+.. .+.
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~----GA~~~in~~~~~~~--~~~~~~~~---~g~ 98 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV----GATECISPKDSTKP--ISEVLSEM---TGN 98 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH----TCSEEECGGGCSSC--HHHHHHHH---HTS
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc----CCcEEECccccchH--HHHHHHHh---ccc
Confidence 5889999986 8999999999999996 899999999988755432 33333322232221 11122211 224
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.+.|.
T Consensus 99 G~d~vi~~~g~ 109 (176)
T d1d1ta2 99 NVGYTFEVIGH 109 (176)
T ss_dssp CCCEEEECSCC
T ss_pred cceEEEEeCCc
Confidence 69999999984
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.16 E-value=0.0015 Score=47.10 Aligned_cols=110 Identities=13% Similarity=0.047 Sum_probs=64.1
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+|.|.|+ |.+|.+++..++.++. +++++++++++.+....++.+. .........| .++ .
T Consensus 3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~~-----------~- 66 (142)
T d1y6ja1 3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YSD-----------V- 66 (142)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GGG-----------G-
T ss_pred eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HHH-----------h-
Confidence 5666687 9999999999999875 8999999998766666566542 1122221111 111 1
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCeEEEecC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISS 154 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~ii~vsS 154 (272)
...|+++..||...... +.-...+..|. .+.+.+++.+.+ .+.+.++++|-
T Consensus 67 ~~adivvitag~~~~~~------~~r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN 118 (142)
T d1y6ja1 67 KDCDVIVVTAGANRKPG------ETRLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN 118 (142)
T ss_dssp TTCSEEEECCCC------------CHHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred CCCceEEEecccccCcC------cchhHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence 46899999999642211 12234455554 444555565555 34577777764
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.13 E-value=0.00097 Score=49.45 Aligned_cols=74 Identities=19% Similarity=0.290 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.+|+|.|+ |++|...++.....|++++++++++++.+.. +++ +.... .|..+.+..... . ..
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~l---Gad~~---i~~~~~~~~~~~-------~-~~ 93 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KAL---GADEV---VNSRNADEMAAH-------L-KS 93 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHH---TCSEE---EETTCHHHHHTT-------T-TC
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hcc---CCcEE---EECchhhHHHHh-------c-CC
Confidence 5889999986 8999999988888899999999988876533 333 33322 355555432211 1 46
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
+|++|.+.|.
T Consensus 94 ~D~vid~~g~ 103 (168)
T d1uufa2 94 FDFILNTVAA 103 (168)
T ss_dssp EEEEEECCSS
T ss_pred Cceeeeeeec
Confidence 9999999984
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.12 E-value=0.0084 Score=44.58 Aligned_cols=115 Identities=10% Similarity=0.068 Sum_probs=64.5
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCC---C----EEEEeeCCh--HHHHHHHHHHHhCCC-eEEEEEecCCCHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLG---A----VVHTCSRNE--VELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G---~----~v~~~~r~~--~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~ 86 (272)
.-+|.||||+|.||++++..|++.. . .+.+.+... +.++...-++++... .+..... -++..+ .
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~~~---~-- 97 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDPYE---V-- 97 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCHHH---H--
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccchh---h--
Confidence 3479999999999999999998753 1 455555543 344555545544321 1111111 122211 1
Q ss_pred HHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-C-CCeEEEec
Q 024125 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-G-VGSIVFIS 153 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~-~g~ii~vs 153 (272)
+ ...|++|..+|..... ..+. ++.++.|. .+.+.+.+.+.+. + ..+|+.+|
T Consensus 98 -----~-~~aDvVvi~ag~~rkp---g~tR---~Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 98 -----F-EDVDWALLIGAKPRGP---GMER---AALLDING----QIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp -----T-TTCSEEEECCCCCCCT---TCCH---HHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -----c-cCCceEEEeeccCCCC---CCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence 2 5799999999873221 1233 34555564 3445666666663 3 34566665
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.09 E-value=0.016 Score=41.40 Aligned_cols=112 Identities=14% Similarity=0.128 Sum_probs=68.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++.|.|+ |.+|.++|..++.+|. +++++++++++.+....+++.. .........+. .+++
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~--~~~~----------- 67 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD--PEIC----------- 67 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC--GGGG-----------
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCC--HHHh-----------
Confidence 35677796 9999999999999986 8999999998876655555532 11122222221 1111
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS 154 (272)
..-|++|.+||..... ..+. .+.+..|.. +.+.+.+.+.+. +.+.++++|.
T Consensus 68 -~daDvVVitaG~~~~~---g~~R---~dl~~~N~~----i~~~i~~~i~~~~p~ai~ivvtN 119 (143)
T d1llda1 68 -RDADMVVITAGPRQKP---GQSR---LELVGATVN----ILKAIMPNLVKVAPNAIYMLITN 119 (143)
T ss_dssp -TTCSEEEECCCCCCCT---TCCH---HHHHHHHHH----HHHHHHHHHHHHCTTSEEEECCS
T ss_pred -hCCcEEEEecccccCC---CCch---hhhhhhhHH----HHHHHHHHHHhhCCCeEEEEeCC
Confidence 3589999999963221 1222 234555653 344555555544 4467777763
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.07 E-value=0.0014 Score=47.07 Aligned_cols=110 Identities=7% Similarity=-0.008 Sum_probs=68.5
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
++.|.|+ |.+|.+++..++.++. ++++++.++++.+....++... .........| .+++
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~------------ 65 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL------------ 65 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG------------
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh------------
Confidence 5677896 8999999999998874 8999999998877655555432 2233332322 2211
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecC
Q 024125 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS 154 (272)
...|+++.+||...... .+. ...+..|+ .+.+.+.+.+.+. +.+.++++|-
T Consensus 66 ~~adivvitag~~~~~g---~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvtN 117 (140)
T d1a5za1 66 KGSDVVIVAAGVPQKPG---ETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVTN 117 (140)
T ss_dssp TTCSEEEECCCCCCCSS---CCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred cCCCEEEEecccccCCC---cch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeCC
Confidence 46899999999743221 122 23344453 3455666666653 4567777763
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.03 E-value=0.0057 Score=45.49 Aligned_cols=86 Identities=14% Similarity=0.124 Sum_probs=61.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH---------------hCCCeEEEEEecCCCHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ---------------SKGFVVSGSVCDAASPDQRE 82 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~~D~~~~~~~~ 82 (272)
++|-|.|- |-+|..+|+.|+++|++|++.+|++++.+++.++-. +.......+...+.+.+.+.
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~ 81 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence 45667776 899999999999999999999999999888764311 11111223334566677888
Q ss_pred HHHHHHHHHcCCCccEEEECCCC
Q 024125 83 KLIQEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 83 ~~~~~~~~~~~~~id~li~~ag~ 105 (272)
.+.+.+.... .+-+++|.+...
T Consensus 82 ~v~~~l~~~~-~~g~iiid~sT~ 103 (176)
T d2pgda2 82 NFIEKLVPLL-DIGDIIIDGGNS 103 (176)
T ss_dssp HHHHHHHHHC-CTTCEEEECSCC
T ss_pred HHHHHHHhcc-ccCcEEEecCcc
Confidence 8888887766 355777877654
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.98 E-value=0.0025 Score=47.32 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|||.|+ ||+|...++.+...|+ +|+.+++++++.+.. +++ +..-.+..-+. .+.+.+.+.+. .++
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-k~l---Ga~~~i~~~~~--~~~~~~~~~~~---~~~ 97 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEF---GATECINPQDF--SKPIQEVLIEM---TDG 97 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHH---TCSEEECGGGC--SSCHHHHHHHH---TTS
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-HHh---CCcEEEeCCch--hhHHHHHHHHH---cCC
Confidence 5889999998 5999999998888897 677788888775543 333 22222211111 12233333332 235
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.+.|.
T Consensus 98 g~D~vid~~G~ 108 (176)
T d2fzwa2 98 GVDYSFECIGN 108 (176)
T ss_dssp CBSEEEECSCC
T ss_pred CCcEeeecCCC
Confidence 69999999984
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.98 E-value=0.004 Score=45.22 Aligned_cols=118 Identities=8% Similarity=-0.005 Sum_probs=68.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.++.|.|+ |.+|.+++..++.++. +++++++++++.+....++... +.+......+. .++ .
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~~~-----------~ 69 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--YDD-----------L 69 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--GGG-----------G
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--ccc-----------c
Confidence 46788895 9999999998888875 8999999887776665555431 22333332221 111 1
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecCC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSV 155 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS~ 155 (272)
..-|+++.++|......-.+... +-...+..|.. +.+.+.+.+++. +.+.++++|-.
T Consensus 70 -~~advvvitag~~~~~g~~~~~~-~R~~l~~~N~~----iv~~i~~~i~~~~p~aivivvtNP 127 (150)
T d1t2da1 70 -AGADVVIVTAGFTKAPGKSDKEW-NRDDLLPLNNK----IMIEIGGHIKKNCPNAFIIVVTNP 127 (150)
T ss_dssp -TTCSEEEECCSCSSCTTCCSTTC-CGGGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSSS
T ss_pred -CCCcEEEEecccccCCCCCcccc-chhHHHHHHHH----HHHHHHHHHHhcCCCeEEEEecCc
Confidence 46899999999643221111010 11233455543 344555555543 44677777643
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.95 E-value=0.0059 Score=43.80 Aligned_cols=112 Identities=12% Similarity=0.067 Sum_probs=66.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
|++.|.|+ |.+|.++|..++.++. ++++++.+++..+....++... ........+ .|.+++
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~----------- 67 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT----------- 67 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG-----------
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh-----------
Confidence 56777886 9999999999998875 8999999887766655555322 122222211 111111
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecC
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS 154 (272)
..-|++|.+||...... ++-.+.+..|+ .+.+.+++.+.+. +.+.++++|-
T Consensus 68 -~~advvvitag~~~~~~------~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN 119 (142)
T d1uxja1 68 -ANSDVIVVTSGAPRKPG------MSREDLIKVNA----DITRACISQAAPLSPNAVIIMVNN 119 (142)
T ss_dssp -TTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred -cCCCEEEEeeeccCCcC------cchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence 46899999999643211 12233444554 4556777776664 4567777663
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.95 E-value=0.0058 Score=44.77 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=35.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
.|.+|||.|+ |++|...++.+...|++|+++++++++++..+
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k 68 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK 68 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh
Confidence 4789999875 89999999988889999999999998876443
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.94 E-value=0.0042 Score=45.60 Aligned_cols=81 Identities=12% Similarity=0.046 Sum_probs=55.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh----------CCCeEEEEEecCCCHHHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS----------KGFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
++.|.|. |-+|.++|+.|.++|++|++++|+++..++.++.-.. ...++.++.+ ..++++++++++
T Consensus 2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l 77 (165)
T d2f1ka2 2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL 77 (165)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence 5677765 9999999999999999999999998887765543100 1223443322 367788888888
Q ss_pred HHHcCCCccEEEECCC
Q 024125 89 GSKFNGKLNILVNNVG 104 (272)
Q Consensus 89 ~~~~~~~id~li~~ag 104 (272)
.+.. .+=.++++.++
T Consensus 78 ~~~l-~~~~iv~~~~s 92 (165)
T d2f1ka2 78 IPHL-SPTAIVTDVAS 92 (165)
T ss_dssp GGGS-CTTCEEEECCS
T ss_pred hhhc-ccccceeeccc
Confidence 7665 23345555554
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.92 E-value=0.0053 Score=44.07 Aligned_cols=111 Identities=9% Similarity=-0.041 Sum_probs=68.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhC----CCeEEEEE-ecCCCHHHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSV-CDAASPDQREKLIQEVGS 90 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~-~D~~~~~~~~~~~~~~~~ 90 (272)
+++.|.|+ |.+|.++|..++.+|. ++++++.+++..+....++++. ........ .|. +++
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~~--------- 67 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SLL--------- 67 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GGG---------
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HHh---------
Confidence 36778896 9999999999998875 7999999998876655555421 22222222 232 211
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCeEEEecC
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~ii~vsS 154 (272)
...|++|..||...... .+. .+.+..|. .+.+.+.+.+.+. +.+.++++|.
T Consensus 68 ---~~adiVvitag~~~~~g---~~r---~~l~~~n~----~i~~~i~~~i~~~~p~aivivvtN 119 (142)
T d1ojua1 68 ---KGSEIIVVTAGLARKPG---MTR---LDLAHKNA----GIIKDIAKKIVENAPESKILVVTN 119 (142)
T ss_dssp ---TTCSEEEECCCCCCCSS---CCH---HHHHHHHH----HHHHHHHHHHHTTSTTCEEEECSS
T ss_pred ---ccccEEEEeccccCCCC---Cch---HHHHHHhh----HHHHHHHHHHHhhCCCcEEEEecC
Confidence 46899999999632221 122 23344443 3445566666664 4467777764
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.92 E-value=0.0055 Score=45.55 Aligned_cols=80 Identities=19% Similarity=0.162 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|+|.|+ |+||...++.+...|+ .|+++++++++++..+ + .+.... +...-.+ +..+...+... ++
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~---~Ga~~~-i~~~~~~-~~~~~~~~~~~---~~ 97 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-A---LGATDC-LNPRELD-KPVQDVITELT---AG 97 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSEE-ECGGGCS-SCHHHHHHHHH---TS
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-H---hCCCcc-cCCccch-hhhhhhHhhhh---cC
Confidence 5789999975 9999999999999998 6888999888765433 2 233222 2111111 12222232222 35
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.|+|.
T Consensus 98 G~d~vie~~G~ 108 (174)
T d1e3ia2 98 GVDYSLDCAGT 108 (174)
T ss_dssp CBSEEEESSCC
T ss_pred CCcEEEEeccc
Confidence 79999999994
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.91 E-value=0.0019 Score=48.00 Aligned_cols=78 Identities=21% Similarity=0.247 Sum_probs=51.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|+|.|+ |++|...++.+...|+ .|+.+++++++++...+ .+... ++ |.++ +..+...+.. .+.
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~ga~~-~i--~~~~-~~~~~~~~~~---~~~ 99 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGADH-VV--DARR-DPVKQVMELT---RGR 99 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTCSE-EE--ETTS-CHHHHHHHHT---TTC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----cccce-ee--cCcc-cHHHHHHHhh---CCC
Confidence 4789999986 9999999998877886 67888888877665442 23332 22 2222 2333333221 123
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|++|.++|.
T Consensus 100 g~d~vid~~g~ 110 (172)
T d1h2ba2 100 GVNVAMDFVGS 110 (172)
T ss_dssp CEEEEEESSCC
T ss_pred CceEEEEecCc
Confidence 59999999994
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.90 E-value=0.0015 Score=47.40 Aligned_cols=85 Identities=11% Similarity=0.066 Sum_probs=57.6
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
++..-|+|.|.||.|-+|..+++.|.++|++|.+.+|+.....+... ....+.....+ ..++...+.++....
T Consensus 5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~~~~~v~~~~~---~~~~~~v~~~~~~~~ 77 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----ANADVVIVSVP---INLTLETIERLKPYL 77 (152)
T ss_dssp SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----TTCSEEEECSC---GGGHHHHHHHHGGGC
T ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----hhccccccccc---hhhheeeeecccccc
Confidence 45566899999999999999999999999999999998765443321 22344433333 445556666666554
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
.+=.+++.++++
T Consensus 78 -~~~~iiiD~~Sv 89 (152)
T d2pv7a2 78 -TENMLLADLTSV 89 (152)
T ss_dssp -CTTSEEEECCSC
T ss_pred -cCCceEEEeccc
Confidence 233466666653
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.90 E-value=0.00049 Score=45.88 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=33.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~ 52 (272)
+++||+++|.|. |.-|+++|+.|.++|++|++.+.+..
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 688999999998 66899999999999999999997543
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.88 E-value=0.0025 Score=47.45 Aligned_cols=79 Identities=23% Similarity=0.267 Sum_probs=52.9
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHH-HHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD-QREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 93 (272)
.|.+|+|.|+ |++|...++.+...|+ +|+.+++++++++..++ .+....+ |.++.+ .+.+.... ..+
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~----lGa~~~i---~~~~~d~~~~~~~~~---~~~ 95 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGATECL---NPKDYDKPIYEVICE---KTN 95 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCSEEE---CGGGCSSCHHHHHHH---HTT
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH----cCCcEEE---cCCCchhHHHHHHHH---hcC
Confidence 5889999986 8999999999998997 79999999988765542 2333222 222211 12222222 123
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+..|++|.+.|.
T Consensus 96 ~G~d~vid~~g~ 107 (174)
T d1p0fa2 96 GGVDYAVECAGR 107 (174)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEEcCCC
Confidence 469999999984
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.86 E-value=0.0015 Score=45.09 Aligned_cols=38 Identities=18% Similarity=0.261 Sum_probs=33.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+++||+|||.|++ .+|..-++.|++.|++|++++...
T Consensus 8 l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~ 45 (113)
T d1pjqa1 8 CQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTF 45 (113)
T ss_dssp ECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSC
T ss_pred EEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccC
Confidence 47999999999985 599999999999999998887643
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.82 E-value=0.0013 Score=49.34 Aligned_cols=48 Identities=21% Similarity=0.194 Sum_probs=41.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS 63 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~ 63 (272)
+++||.|||.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+..
T Consensus 15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~ 62 (177)
T d1nvta1 15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE 62 (177)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence 589999999987 678999999997766 999999999999998887754
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.79 E-value=0.0099 Score=43.65 Aligned_cols=82 Identities=21% Similarity=0.243 Sum_probs=61.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
..+.-+|+|.|+ |-.|++.++...+.|++|.+.+.+.++++++....... + .+-.++.+.+++.+
T Consensus 29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~---~---~~~~~~~~~l~~~~-------- 93 (168)
T d1pjca1 29 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR---V---ELLYSNSAEIETAV-------- 93 (168)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG---S---EEEECCHHHHHHHH--------
T ss_pred CCCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc---c---eeehhhhhhHHHhh--------
Confidence 456788999987 57899999999999999999999999998887766432 2 22345566655544
Q ss_pred CCccEEEECCCCCCCCC
Q 024125 94 GKLNILVNNVGTNIRKP 110 (272)
Q Consensus 94 ~~id~li~~ag~~~~~~ 110 (272)
...|+||.++-+.....
T Consensus 94 ~~aDivI~aalipG~~a 110 (168)
T d1pjca1 94 AEADLLIGAVLVPGRRA 110 (168)
T ss_dssp HTCSEEEECCCCTTSSC
T ss_pred ccCcEEEEeeecCCccc
Confidence 35899999998754443
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.78 E-value=0.0015 Score=49.75 Aligned_cols=79 Identities=24% Similarity=0.287 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|||.|+ |++|...+......|+ +|+++++++++++... +.+.... .|-.+. ++.+.+.++.+ +.
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~----~~Ga~~~---~~~~~~-~~~~~i~~~t~--g~ 93 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFEIA---DLSLDT-PLHEQIAALLG--EP 93 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCEEE---ETTSSS-CHHHHHHHHHS--SS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh----hccccEE---EeCCCc-CHHHHHHHHhC--CC
Confidence 5889999986 8999888888777787 7889999988776443 3343322 222222 22222333322 23
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
..|++|.+.|.
T Consensus 94 g~D~vid~vG~ 104 (195)
T d1kola2 94 EVDCAVDAVGF 104 (195)
T ss_dssp CEEEEEECCCT
T ss_pred CcEEEEECccc
Confidence 59999999985
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.70 E-value=0.033 Score=40.19 Aligned_cols=114 Identities=11% Similarity=0.104 Sum_probs=61.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCCh--HHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNE--VELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
.+|.|+||+|.+|++++..|+..+. .+++.+.++ +..+.+..++.... ........-..+.+ .+
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~-- 77 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEI----AF-- 77 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHH----HT--
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCccccc----cc--
Confidence 4899999999999999999986542 456665443 33444443333321 11221221111111 12
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCC-CeEEEec
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGV-GSIVFIS 153 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~-g~ii~vs 153 (272)
...|++|.++|......-... +.++.|. .+.+.+.+.+.+ .+. +.++.+|
T Consensus 78 ------~~~dvVVitag~~~~~g~sr~------dll~~N~----~i~k~~~~~i~k~a~~~~~iivvs 129 (154)
T d5mdha1 78 ------KDLDVAILVGSMPRRDGMERK------DLLKANV----KIFKCQGAALDKYAKKSVKVIVVG 129 (154)
T ss_dssp ------TTCSEEEECCSCCCCTTCCTT------TTHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ------CCceEEEEecccCCCCCCchh------HHHHHhH----HHHHHHHHHHHhhCCCceEEEEec
Confidence 479999999997433221111 2334443 344555555555 343 3455655
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.68 E-value=0.0024 Score=48.42 Aligned_cols=44 Identities=25% Similarity=0.232 Sum_probs=38.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 62 (272)
|+|.|.|+ |-+|..+|..++.+|++|++++++++.++...+.++
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~ 48 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE 48 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence 78999998 789999999999999999999999988776665543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.55 E-value=0.0084 Score=44.26 Aligned_cols=80 Identities=23% Similarity=0.253 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+|+|.|+ |++|...+..+...|+ +|+.+++++++++..+ +.+..-.+...+..+. .++..... .++
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~----~~GAd~~in~~~~~~~--~~~~~~~~---~~~ 97 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGATDFVNPNDHSEP--ISQVLSKM---TNG 97 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCCEEECGGGCSSC--HHHHHHHH---HTS
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH----HcCCcEEEcCCCcchh--HHHHHHhh---ccC
Confidence 5789999986 6788888888888877 7889999998876544 2333322222222111 22222222 124
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
.+|+++.+.|.
T Consensus 98 G~d~vid~~G~ 108 (175)
T d1cdoa2 98 GVDFSLECVGN 108 (175)
T ss_dssp CBSEEEECSCC
T ss_pred CcceeeeecCC
Confidence 69999999984
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.48 E-value=0.012 Score=42.98 Aligned_cols=85 Identities=8% Similarity=0.035 Sum_probs=54.9
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH-------hCCCeEEEEEecCCCHHHHHHHH---HHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-------SKGFVVSGSVCDAASPDQREKLI---QEV 88 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~---~~~ 88 (272)
+|-|.| .|-+|+.+|+.|+++|++|++.+|++++.+++.+.-. +...+...+-+-+.+.+++++++ +.+
T Consensus 2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~ 80 (161)
T d1vpda2 2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 80 (161)
T ss_dssp EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence 355555 4899999999999999999999999988877654210 00011222334466677777776 334
Q ss_pred HHHcCCCccEEEECCCC
Q 024125 89 GSKFNGKLNILVNNVGT 105 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~ 105 (272)
.... .+-+++|.+...
T Consensus 81 ~~~~-~~g~iiid~sT~ 96 (161)
T d1vpda2 81 IEGA-KPGTVLIDMSSI 96 (161)
T ss_dssp HHHC-CTTCEEEECSCC
T ss_pred hhcc-CCCCEEEECCCC
Confidence 4443 344677776654
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=96.34 E-value=0.0051 Score=46.91 Aligned_cols=43 Identities=26% Similarity=0.370 Sum_probs=38.3
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~ 57 (272)
+|+||+|.|-| .|.+|+++++.|.+.|++|++++.+.+..+..
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~ 66 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA 66 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence 69999999997 67799999999999999999999988776544
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.34 E-value=0.011 Score=47.68 Aligned_cols=35 Identities=29% Similarity=0.292 Sum_probs=28.8
Q ss_pred CCCCE-EEEeCCC------------------ChHHHHHHHHHHHCCCEEEEeeC
Q 024125 15 LKGMT-ALVTGGT------------------RGIGQATVEELAGLGAVVHTCSR 49 (272)
Q Consensus 15 l~~k~-vlItGa~------------------~giG~~ia~~l~~~G~~v~~~~r 49 (272)
+.||+ ||||.|+ |..|.++|+.++.+|++|+++.+
T Consensus 15 ~~g~k~VLITaG~T~epID~~pVR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g 68 (290)
T d1p9oa_ 15 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYR 68 (290)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccCCcEEEEccCCcCcccCCCCceEeCCCCchHHHHHHHHHHHHcCCEEEEEec
Confidence 45555 7888775 88999999999999999988753
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.31 E-value=0.005 Score=45.71 Aligned_cols=42 Identities=21% Similarity=0.089 Sum_probs=37.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~ 59 (272)
.|++-|.|+ |.+|.++|..|+++|++|.+++|++++.+...+
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD 42 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 378899998 899999999999999999999999988776654
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.21 E-value=0.0037 Score=47.07 Aligned_cols=44 Identities=23% Similarity=0.166 Sum_probs=38.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 62 (272)
|+|-|.|+ |-+|..+|..++.+|++|.+.+++++.+++..+.+.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~ 48 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA 48 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence 56888888 789999999999999999999999988776665543
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.11 E-value=0.011 Score=42.78 Aligned_cols=76 Identities=14% Similarity=0.037 Sum_probs=57.6
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (272)
.++|.|. |.+|+.+++.|.++|.+|++++.++++.....++.... .+.++..|.++++.++++- . .+.|.
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~~~vi~Gd~~d~~~L~~a~------i-~~a~~ 74 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAG------I-DRCRA 74 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHT------T-TTCSE
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--CcEEEEccCcchHHHHHhc------c-ccCCE
Confidence 4667776 79999999999999999999999887766666555433 4567789999998654442 1 46888
Q ss_pred EEECCC
Q 024125 99 LVNNVG 104 (272)
Q Consensus 99 li~~ag 104 (272)
+|.+..
T Consensus 75 vi~~~~ 80 (153)
T d1id1a_ 75 ILALSD 80 (153)
T ss_dssp EEECSS
T ss_pred EEEccc
Confidence 887764
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.04 E-value=0.056 Score=39.32 Aligned_cols=83 Identities=8% Similarity=-0.007 Sum_probs=56.4
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHh------------CCCeEEEEEecCCCHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQS------------KGFVVSGSVCDAASPDQREK 83 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~ 83 (272)
|+++|.|. |-+|.++|+.|.+.|+ +|+.++|+++.++..++.-.. ...++.++. +.++.+..
T Consensus 2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~ 77 (171)
T d2g5ca2 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE 77 (171)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence 56889975 8999999999999996 789999998887766543110 011222222 23677888
Q ss_pred HHHHHHHHcCCCccEEEECCCC
Q 024125 84 LIQEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 84 ~~~~~~~~~~~~id~li~~ag~ 105 (272)
+++++.+.. .+-.+++.++++
T Consensus 78 vl~~l~~~~-~~~~ii~d~~s~ 98 (171)
T d2g5ca2 78 IAKKLSYIL-SEDATVTDQGSV 98 (171)
T ss_dssp HHHHHHHHS-CTTCEEEECCSC
T ss_pred hhhhhhccc-cccccccccccc
Confidence 888888776 334555655553
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.87 E-value=0.072 Score=38.53 Aligned_cols=85 Identities=7% Similarity=0.034 Sum_probs=54.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH-------hCCCeEEEEEecCCCHHHHHHHHHH---H
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-------SKGFVVSGSVCDAASPDQREKLIQE---V 88 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~---~ 88 (272)
+|-|. |.|-+|.++|+.|+++|++|.+.+|+.++.+.+.+.-. +.......+..-+.+.+.++.++.. +
T Consensus 3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~ 81 (162)
T d3cuma2 3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 81 (162)
T ss_dssp EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence 45555 55899999999999999999999999888776553311 0011222333445666777666543 3
Q ss_pred HHHcCCCccEEEECCCC
Q 024125 89 GSKFNGKLNILVNNVGT 105 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~ 105 (272)
.... .+=+++|.+...
T Consensus 82 ~~~l-~~g~iiid~st~ 97 (162)
T d3cuma2 82 LAHI-APGTLVLECSTI 97 (162)
T ss_dssp HHHS-CTTCEEEECSCC
T ss_pred cccC-CCCCEEEECCCC
Confidence 3333 234677777764
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.84 E-value=0.029 Score=38.15 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=54.3
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
..-...++.|.| +|-+|+.++....+.|.++++.+.+++...... --.++..|..|.+.+.++....
T Consensus 7 ~~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v--------a~~~i~~~~~d~~~l~~~~~~~---- 73 (111)
T d1kjqa2 7 LRPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV--------AHRSHVINMLDGDALRRVVELE---- 73 (111)
T ss_dssp TSTTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG--------SSEEEECCTTCHHHHHHHHHHH----
T ss_pred CCCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc--------CCeEEECCCCCHHHHHHHHHhh----
Confidence 344567899999 579999999999999999999998765432211 1134678999999888877642
Q ss_pred CCCccEEE
Q 024125 93 NGKLNILV 100 (272)
Q Consensus 93 ~~~id~li 100 (272)
.+|+|-
T Consensus 74 --~~DviT 79 (111)
T d1kjqa2 74 --KPHYIV 79 (111)
T ss_dssp --CCSEEE
T ss_pred --CCceEE
Confidence 578884
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.80 E-value=0.0036 Score=45.34 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=32.5
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR 49 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r 49 (272)
+.++||+|||.|| |.+|..-++.|++.|++|.+++.
T Consensus 9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap 44 (150)
T d1kyqa1 9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP 44 (150)
T ss_dssp ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 5699999999999 56999999999999999988864
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=95.69 E-value=0.048 Score=40.10 Aligned_cols=79 Identities=18% Similarity=0.142 Sum_probs=51.9
Q ss_pred CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC------------------CeEEEEEecCCCHHHHHHHHH
Q 024125 25 GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG------------------FVVSGSVCDAASPDQREKLIQ 86 (272)
Q Consensus 25 a~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------------------~~~~~~~~D~~~~~~~~~~~~ 86 (272)
|.|-+|.+++++|+++|++|.+.+|++++.+++.++-.... .....+..-+.....+...+.
T Consensus 8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (178)
T d1pgja2 8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE 87 (178)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence 56899999999999999999999999999988876532110 011112223344455555666
Q ss_pred HHHHHcCCCccEEEECCC
Q 024125 87 EVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 87 ~~~~~~~~~id~li~~ag 104 (272)
.+...+ .+=++++++..
T Consensus 88 ~~~~~~-~~~~iii~~st 104 (178)
T d1pgja2 88 QLKKVF-EKGDILVDTGN 104 (178)
T ss_dssp HHHHHC-CTTCEEEECCC
T ss_pred hhhhhc-cccceecccCc
Confidence 665555 34456666554
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.59 E-value=0.025 Score=42.80 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=57.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
-+++|++||=.|+++|. ++..++..|+ .|+.++.+++.++...+.+...+.+..++..|..+
T Consensus 43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~-------------- 105 (201)
T d1wy7a1 43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-------------- 105 (201)
T ss_dssp TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG--------------
T ss_pred CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhh--------------
Confidence 46899999977777662 2233456776 89999999999888888887777788888888632
Q ss_pred cCCCccEEEECCCC
Q 024125 92 FNGKLNILVNNVGT 105 (272)
Q Consensus 92 ~~~~id~li~~ag~ 105 (272)
+.++.|+||.|+-.
T Consensus 106 ~~~~fD~Vi~nPP~ 119 (201)
T d1wy7a1 106 FNSRVDIVIMNPPF 119 (201)
T ss_dssp CCCCCSEEEECCCC
T ss_pred hCCcCcEEEEcCcc
Confidence 23689999999864
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.51 E-value=0.043 Score=40.70 Aligned_cols=45 Identities=20% Similarity=0.152 Sum_probs=37.4
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 60 (272)
+..-+|+|.|+ |-.|.+.++.....|++|.+.+.+.++++++.+.
T Consensus 27 V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l 71 (183)
T d1l7da1 27 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL 71 (183)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred cCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence 34457888887 5789999999999999999999999887776644
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.51 E-value=0.02 Score=44.70 Aligned_cols=34 Identities=29% Similarity=0.373 Sum_probs=30.5
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSR 49 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r 49 (272)
|++++|+|.| .||+|.+++..|++.|. ++.++|.
T Consensus 28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~ 62 (247)
T d1jw9b_ 28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDF 62 (247)
T ss_dssp HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence 7789999999 57899999999999998 7888874
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=95.40 E-value=0.017 Score=44.93 Aligned_cols=76 Identities=14% Similarity=0.096 Sum_probs=60.5
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
..++++||=.|++.|. ++..|+++|.+|+.++.+++.++...+.+...+.++.++..|+.+.+ ..
T Consensus 35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~------------~~ 99 (246)
T d1y8ca_ 35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN------------IN 99 (246)
T ss_dssp TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC------------CS
T ss_pred CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc------------cc
Confidence 4667899999999885 77888999999999999999888887777777778888888876432 12
Q ss_pred CCccEEEECCC
Q 024125 94 GKLNILVNNVG 104 (272)
Q Consensus 94 ~~id~li~~ag 104 (272)
++.|+|++..+
T Consensus 100 ~~fD~i~~~~~ 110 (246)
T d1y8ca_ 100 RKFDLITCCLD 110 (246)
T ss_dssp CCEEEEEECTT
T ss_pred ccccccceeee
Confidence 57899987544
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.37 E-value=0.014 Score=42.85 Aligned_cols=43 Identities=23% Similarity=0.275 Sum_probs=37.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~ 55 (272)
.+++||+++|.|-+.-+|+-++..|.++|++|+++.+....+.
T Consensus 33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~ 75 (166)
T d1b0aa1 33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR 75 (166)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence 3589999999999999999999999999999998876654443
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.20 E-value=0.011 Score=43.09 Aligned_cols=35 Identities=26% Similarity=0.228 Sum_probs=31.7
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~ 53 (272)
++|.|.|+ |.+|..++..|++.|.+|.+++|+.+.
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence 47899998 999999999999999999999998754
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.20 E-value=0.012 Score=43.33 Aligned_cols=43 Identities=26% Similarity=0.370 Sum_probs=38.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~ 55 (272)
.+++||+++|.|-+.-+|+-++..|+++|++|.++......+.
T Consensus 35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~ 77 (170)
T d1a4ia1 35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD 77 (170)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence 4689999999999999999999999999999999987665443
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.20 E-value=0.073 Score=36.18 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=29.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.|+++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~ 55 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence 478888886 7999999999999999999988754
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.13 E-value=0.023 Score=40.85 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=34.8
Q ss_pred EEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKE 60 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~ 60 (272)
++.+.|+ |-+|.++++.|.+.| .+|++++|++++.+.+.++
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~ 43 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE 43 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence 4667766 999999999999887 7999999999988877654
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.13 E-value=0.069 Score=41.20 Aligned_cols=74 Identities=15% Similarity=0.062 Sum_probs=58.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.+++||=.|++.| .++..|+++|++|+.++-+++-++...+.+...+.++.+...|+.+.. +++.
T Consensus 41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~------------~~~~ 105 (251)
T d1wzna1 41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA------------FKNE 105 (251)
T ss_dssp CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC------------CCSC
T ss_pred CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc------------cccc
Confidence 4678999999887 456678899999999999998888888887777778888888875532 2246
Q ss_pred ccEEEECCC
Q 024125 96 LNILVNNVG 104 (272)
Q Consensus 96 id~li~~ag 104 (272)
.|.|++.-+
T Consensus 106 fD~I~~~~~ 114 (251)
T d1wzna1 106 FDAVTMFFS 114 (251)
T ss_dssp EEEEEECSS
T ss_pred cchHhhhhh
Confidence 898887543
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.99 E-value=0.091 Score=36.07 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=29.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
+|+++|.|| |.+|.++|..|.++|.+|.++.+..
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~ 63 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP 63 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence 578888876 7999999999999999999998754
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=94.78 E-value=0.061 Score=40.48 Aligned_cols=72 Identities=19% Similarity=0.163 Sum_probs=52.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
-+++||+||=.|+++|+ ++..++..|+ .|+.++.+++..+...+.+ .++.++.+|+.+
T Consensus 45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~----~~~~~~~~D~~~-------------- 103 (197)
T d1ne2a_ 45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC----GGVNFMVADVSE-------------- 103 (197)
T ss_dssp TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC----TTSEEEECCGGG--------------
T ss_pred CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc----ccccEEEEehhh--------------
Confidence 46899999999998884 3344666776 7999999887766554433 356677888743
Q ss_pred cCCCccEEEECCCC
Q 024125 92 FNGKLNILVNNVGT 105 (272)
Q Consensus 92 ~~~~id~li~~ag~ 105 (272)
.+++.|+||.|+-.
T Consensus 104 l~~~fD~Vi~NPPf 117 (197)
T d1ne2a_ 104 ISGKYDTWIMNPPF 117 (197)
T ss_dssp CCCCEEEEEECCCC
T ss_pred cCCcceEEEeCccc
Confidence 23689999999754
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=94.78 E-value=0.038 Score=41.52 Aligned_cols=83 Identities=17% Similarity=0.144 Sum_probs=62.8
Q ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTAL-VTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vl-ItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.+.+++ +|.|+||.-.++.+.+ . +..|+.++++++.++...+.+...+.++.+++.+.++...+ +.... . .
T Consensus 23 ~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~~--~-~ 94 (192)
T d1m6ya2 23 DEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTLG--I-E 94 (192)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHTT--C-S
T ss_pred CCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHcC--C-C
Confidence 344444 8889999999888876 3 46899999999999988888877777899999888765443 22221 1 5
Q ss_pred CccEEEECCCCC
Q 024125 95 KLNILVNNVGTN 106 (272)
Q Consensus 95 ~id~li~~ag~~ 106 (272)
++|.|+...|+.
T Consensus 95 ~vdgIl~DlGvS 106 (192)
T d1m6ya2 95 KVDGILMDLGVS 106 (192)
T ss_dssp CEEEEEEECSCC
T ss_pred Ccceeeeccchh
Confidence 799999998873
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.78 E-value=0.065 Score=36.86 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=29.5
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.|+++|.|| |.||.++|..|.+.|.+|.++.++.
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence 478888886 6999999999999999999988754
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=94.75 E-value=0.091 Score=35.83 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=29.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
.|+++|.|| |.+|.++|..|++.|.+|.++.|.
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~ 54 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARG 54 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehh
Confidence 478888876 799999999999999999999874
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=94.71 E-value=0.018 Score=40.24 Aligned_cols=71 Identities=17% Similarity=0.106 Sum_probs=49.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (272)
|.++|.| .|.+|+.+++.|. |..+++++.+++..+... .. .+.++..|.++++.++++- . .+.+
T Consensus 1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a~------i-~~A~ 64 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVL----RS--GANFVHGDPTRVSDLEKAN------V-RGAR 64 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----HT--TCEEEESCTTSHHHHHHTT------C-TTCS
T ss_pred CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----hc--CccccccccCCHHHHHHhh------h-hcCc
Confidence 4577777 4789999999984 556778888887765443 22 3566789999988665432 1 4678
Q ss_pred EEEECCC
Q 024125 98 ILVNNVG 104 (272)
Q Consensus 98 ~li~~ag 104 (272)
.+|.+..
T Consensus 65 ~vi~~~~ 71 (129)
T d2fy8a1 65 AVIVNLE 71 (129)
T ss_dssp EEEECCS
T ss_pred EEEEecc
Confidence 8876553
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=94.60 E-value=0.031 Score=41.62 Aligned_cols=37 Identities=35% Similarity=0.380 Sum_probs=33.6
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.++||++.|.|.+. ||+.+++.+..-|.+|+..+|+.
T Consensus 39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~ 75 (181)
T d1qp8a1 39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTP 75 (181)
T ss_dssp CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSC
T ss_pred cccCceEEEecccc-ccccceeeeeccccccccccccc
Confidence 48999999999865 99999999999999999999865
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.59 E-value=0.1 Score=35.94 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=29.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
.|+++|.||+ .||.++|..|.+.|.+|.++.|.
T Consensus 22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~ 54 (125)
T d3grsa2 22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRH 54 (125)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeec
Confidence 3788888874 79999999999999999999885
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=94.38 E-value=0.15 Score=35.43 Aligned_cols=73 Identities=21% Similarity=0.224 Sum_probs=52.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
.++.|.|++|.+|+++++.+.++|.+++. .+++... .+ ...++ -.|.|.++...+.++...+. ++
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~--~~~DV---vIDFS~p~~~~~~l~~~~~~---~~ 66 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------EL--DSPDV---VIDFSSPEALPKTVDLCKKY---RA 66 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------EC--SCCSE---EEECSCGGGHHHHHHHHHHH---TC
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hh--ccCCE---EEEecCHHHHHHHHHHHHhc---CC
Confidence 36899999999999999999999987654 4443211 00 12233 46999999999999888765 35
Q ss_pred cEEEECCC
Q 024125 97 NILVNNVG 104 (272)
Q Consensus 97 d~li~~ag 104 (272)
-+|+-..|
T Consensus 67 p~ViGTTG 74 (128)
T d1vm6a3 67 GLVLGTTA 74 (128)
T ss_dssp EEEECCCS
T ss_pred CEEEEcCC
Confidence 67766666
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=94.35 E-value=0.11 Score=35.33 Aligned_cols=33 Identities=27% Similarity=0.268 Sum_probs=28.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
|+++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus 22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence 67777775 7999999999999999999998754
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.34 E-value=0.013 Score=49.81 Aligned_cols=34 Identities=29% Similarity=0.406 Sum_probs=29.8
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSR 49 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r 49 (272)
|++.+|||.|+ ||||.++++.|+..|. ++.+++.
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~ 69 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDM 69 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECC
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEEC
Confidence 56778999999 6799999999999998 7888875
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.33 E-value=0.2 Score=34.99 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=51.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHC-CCEEE-EeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 19 TALVTGGTRGIGQATVEELAGL-GAVVH-TCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~-G~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|.|.|++|.+|+++++.+.+. +.+++ .+++.... . .+...+.++ ..|.|.++.+.+.++.+.+. ++
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~-~----~~~~~~~Dv---vIDFS~p~~~~~~~~~~~~~---~~ 69 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPL-S----LLTDGNTEV---VIDFTHPDVVMGNLEFLIDN---GI 69 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCT-H----HHHTTTCSE---EEECCCTTTHHHHHHHHHHT---TC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCch-h----hhccccCCE---EEEcccHHHHHHHHHHHHhc---CC
Confidence 5889999999999999998776 45554 45553321 1 222233444 46999999998888887754 46
Q ss_pred cEEEECCC
Q 024125 97 NILVNNVG 104 (272)
Q Consensus 97 d~li~~ag 104 (272)
-+|+-..|
T Consensus 70 ~~ViGTTG 77 (135)
T d1yl7a1 70 HAVVGTTG 77 (135)
T ss_dssp EEEECCCC
T ss_pred CEEEeccc
Confidence 67775555
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=94.25 E-value=0.18 Score=34.23 Aligned_cols=34 Identities=26% Similarity=0.112 Sum_probs=29.4
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.++++|.|| |.||.++|..|++.|.+|.++.+..
T Consensus 22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence 478888886 7999999999999999998887643
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.17 E-value=0.15 Score=34.98 Aligned_cols=35 Identities=23% Similarity=0.214 Sum_probs=29.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
++|+++|.|| |.+|.++|..|++.|.+|.++.+..
T Consensus 29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence 4678888865 7999999999999999999987643
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.15 E-value=0.047 Score=40.11 Aligned_cols=40 Identities=25% Similarity=0.250 Sum_probs=36.0
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
+..+++||.++|.|-|.=+|+=++..|+++|++|..+..+
T Consensus 23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~ 62 (171)
T d1edza1 23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 62 (171)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence 3458999999999999999999999999999999988754
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=94.06 E-value=0.065 Score=42.02 Aligned_cols=74 Identities=18% Similarity=0.173 Sum_probs=55.7
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
..|++||=.|+++|+- +..+++.|++|+.++.+++..+...+..+.++....++..|+. + .+ . . +
T Consensus 119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~---~---~~----~-~-~ 183 (254)
T d2nxca1 119 RPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLE---A---AL----P-F-G 183 (254)
T ss_dssp CTTCEEEEETCTTSHH---HHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHH---H---HG----G-G-C
T ss_pred CccCEEEEcccchhHH---HHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEecccc---c---cc----c-c-c
Confidence 5689999999999863 3356778999999999999999888888877777777776641 1 11 1 1 5
Q ss_pred CccEEEECC
Q 024125 95 KLNILVNNV 103 (272)
Q Consensus 95 ~id~li~~a 103 (272)
+.|+|+.|.
T Consensus 184 ~fD~V~ani 192 (254)
T d2nxca1 184 PFDLLVANL 192 (254)
T ss_dssp CEEEEEEEC
T ss_pred ccchhhhcc
Confidence 799998763
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=94.06 E-value=0.045 Score=39.30 Aligned_cols=41 Identities=7% Similarity=0.027 Sum_probs=34.8
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 61 (272)
+.|. |+|-+|.++++.|.+.|.++++.+|+.++.+++.+++
T Consensus 3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~ 43 (152)
T d2ahra2 3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL 43 (152)
T ss_dssp EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence 4455 5689999999999999999999999999888776654
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.94 E-value=0.098 Score=37.36 Aligned_cols=35 Identities=23% Similarity=0.230 Sum_probs=28.6
Q ss_pred CCEEEE-eCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 17 GMTALV-TGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 17 ~k~vlI-tGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
++.++| -.+++.||.++|..|+++|.+|.++.+..
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~ 74 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 74 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence 444554 45779999999999999999999998764
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.90 E-value=0.13 Score=35.27 Aligned_cols=34 Identities=29% Similarity=0.322 Sum_probs=29.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
+|.++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence 367788775 7999999999999999999998754
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=93.82 E-value=0.035 Score=41.59 Aligned_cols=41 Identities=24% Similarity=0.153 Sum_probs=34.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~ 59 (272)
+++.|.|++ -.|.++|..|++.|.+|.+.+|+++..+++.+
T Consensus 8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~ 48 (189)
T d1n1ea2 8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVNE 48 (189)
T ss_dssp EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence 468888874 59999999999999999999999887776554
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.77 E-value=0.11 Score=40.00 Aligned_cols=48 Identities=23% Similarity=0.261 Sum_probs=41.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 61 (272)
.+|+||+|+|-|- |-+|+++++.|.+.|++|+.++.+.........+.
T Consensus 35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~ 82 (230)
T d1leha1 35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 82 (230)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence 4689999999875 68999999999999999999999888777666543
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.74 E-value=0.12 Score=35.37 Aligned_cols=32 Identities=28% Similarity=0.309 Sum_probs=27.8
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
++++|.|| |.||.++|..|.+.|.+|.++.|+
T Consensus 21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 56777776 799999999999999999888775
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=93.74 E-value=0.38 Score=38.71 Aligned_cols=80 Identities=16% Similarity=0.149 Sum_probs=54.2
Q ss_pred CCCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCC-eEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGG-TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa-~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+|++||=.++ +|+++.+ +++.+.+|+.++.+++.++...+.+..++. ++.++..|..+ +.+.+...
T Consensus 144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~- 212 (318)
T d1wxxa2 144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKE- 212 (318)
T ss_dssp CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHT-
T ss_pred hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhh-
Confidence 46888885554 4555443 344567999999999999988888877754 57777777532 22222222
Q ss_pred CCCccEEEECCCC
Q 024125 93 NGKLNILVNNVGT 105 (272)
Q Consensus 93 ~~~id~li~~ag~ 105 (272)
+.+.|+||.++..
T Consensus 213 ~~~fD~Vi~DpP~ 225 (318)
T d1wxxa2 213 GERFDLVVLDPPA 225 (318)
T ss_dssp TCCEEEEEECCCC
T ss_pred hcCCCEEEEcCCc
Confidence 2579999998754
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=93.72 E-value=0.14 Score=34.58 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=28.3
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
.|+++|.|| |.+|.++|..|.+.|.+|.++.|.
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~ 53 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEAR 53 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcccceEEEeee
Confidence 477777765 799999999999999999998774
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.68 E-value=0.11 Score=37.56 Aligned_cols=40 Identities=25% Similarity=0.410 Sum_probs=35.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~ 53 (272)
..|.||+++|.|= |-||+.+|+.+...|++|++++.++-+
T Consensus 20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~ 59 (163)
T d1li4a1 20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN 59 (163)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence 3578999999985 589999999999999999999998754
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=93.52 E-value=0.88 Score=32.78 Aligned_cols=117 Identities=8% Similarity=0.096 Sum_probs=63.1
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC-----CCEEEEeeCChHHHHHHHHHHHh----CCCeEEEE-EecCCCHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGL-----GAVVHTCSRNEVELNKCLKEWQS----KGFVVSGS-VCDAASPDQREKLIQE 87 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~-----G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~-~~D~~~~~~~~~~~~~ 87 (272)
.++.|.||++.-...+...++.+ +.++++++.++++++.....++. .+...... ..| .. +.+
T Consensus 4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~---eal-- 75 (167)
T d1u8xx1 4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTD---PE---EAF-- 75 (167)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESC---HH---HHH--
T ss_pred ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCC---hh---hcc--
Confidence 45777788664333344444442 23899999999998754444332 12222222 222 21 122
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHh----------------HHHHHHHHHHHHHHHc-CCCCeEE
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF----------------ESTYHLCQLVYPLLKA-SGVGSIV 150 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~----------------~~~~~l~~~~~~~~~~-~~~g~ii 150 (272)
..-|+||+.+|.... ...+-++.+..|+ .....+.+.+++.+++ .+.+.++
T Consensus 76 ------~~AD~Vvitag~~~~------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li 143 (167)
T d1u8xx1 76 ------TDVDFVMAHIRVGKY------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWML 143 (167)
T ss_dssp ------SSCSEEEECCCTTHH------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred ------CCCCEEEECCCcCCC------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEE
Confidence 579999999996321 1122223333332 2234455666666655 4557778
Q ss_pred EecC
Q 024125 151 FISS 154 (272)
Q Consensus 151 ~vsS 154 (272)
++|-
T Consensus 144 ~~TN 147 (167)
T d1u8xx1 144 NYSN 147 (167)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 8774
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=93.48 E-value=0.25 Score=33.39 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=30.5
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+|+++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~ 55 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE 55 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence 4788888876 7999999999999999999988754
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=93.42 E-value=0.16 Score=34.77 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=29.6
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.|+++|.|| |-||.++|..|.+.|.+|.++.|++
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~ 58 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS 58 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence 477888876 7999999999999999999998754
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.32 E-value=0.035 Score=41.14 Aligned_cols=34 Identities=21% Similarity=0.192 Sum_probs=28.9
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~ 52 (272)
++|.|.|+ |..|.++|..|++.|.+|.+.+|..+
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~ 34 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD 34 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 35677776 78999999999999999999998544
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=93.05 E-value=0.11 Score=38.12 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=53.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC-------------CCeEEEEEecCCCHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-------------GFVVSGSVCDAASPDQRE 82 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~ 82 (272)
.|++||..|++.| ..+..|+++|++|+.++-+++.++...+..+.. +....+...|..+....
T Consensus 20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~- 95 (201)
T d1pjza_ 20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR- 95 (201)
T ss_dssp TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH-
T ss_pred CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc-
Confidence 5889999999888 467789999999999999999988887776433 22345566676554321
Q ss_pred HHHHHHHHHcCCCccEEEECCC
Q 024125 83 KLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 83 ~~~~~~~~~~~~~id~li~~ag 104 (272)
.. ...|.|+....
T Consensus 96 --~~-------~~~D~i~~~~~ 108 (201)
T d1pjza_ 96 --DI-------GHCAAFYDRAA 108 (201)
T ss_dssp --HH-------HSEEEEEEESC
T ss_pred --cc-------cceeEEEEEee
Confidence 10 35788776543
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=92.99 E-value=1.7 Score=34.63 Aligned_cols=144 Identities=15% Similarity=0.094 Sum_probs=79.5
Q ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 16 KGMTALVTG-GTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 16 ~~k~vlItG-a~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
+|++||=.. ++|+++.+ .+..|+ .|+.++.+...++...+.++.++ .++.++..|.- +.++...+
T Consensus 144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~ 213 (317)
T d2b78a2 144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR 213 (317)
T ss_dssp BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence 588888544 45555543 345777 79999999988888888776654 35778888752 22333333
Q ss_pred HcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHH
Q 024125 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (272)
Q Consensus 91 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~s 170 (272)
. +.+.|+||..+-.....+-.-.+. .+ ....+++.+++.++. +|.+++.|. +.. .+
T Consensus 214 ~-~~~fD~Ii~DPP~f~~~~~~~~~~---~~-------~~~~L~~~a~~ll~p--gG~l~~~sc-s~~--------~~-- 269 (317)
T d2b78a2 214 H-HLTYDIIIIDPPSFARNKKEVFSV---SK-------DYHKLIRQGLEILSE--NGLIIASTN-AAN--------MT-- 269 (317)
T ss_dssp T-TCCEEEEEECCCCC-----CCCCH---HH-------HHHHHHHHHHHTEEE--EEEEEEEEC-CTT--------SC--
T ss_pred h-cCCCCEEEEcChhhccchhHHHHH---HH-------HHHHHHHHHHHHcCC--CCEEEEEeC-Ccc--------CC--
Confidence 3 257999999876433222111221 11 123355666666644 356665442 211 11
Q ss_pred HHHHHHHHHHHHHHHccCCeeEEEee
Q 024125 171 KAAMNQLTRNLACEWAKDNIRTNSVA 196 (272)
Q Consensus 171 K~a~~~~~~~la~el~~~~i~v~~v~ 196 (272)
.+.|.+.+.+.+...+.++..+.
T Consensus 270 ---~~~f~~~v~~a~~~~~~~~~~~~ 292 (317)
T d2b78a2 270 ---VSQFKKQIEKGFGKQKHTYLDLQ 292 (317)
T ss_dssp ---HHHHHHHHHHHHTTCCCEEEEEE
T ss_pred ---HHHHHHHHHHHHHHcCCeEEEec
Confidence 22344444555556677766554
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=92.93 E-value=0.27 Score=34.07 Aligned_cols=35 Identities=17% Similarity=0.113 Sum_probs=30.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+|+++|.|| |.+|.++|..|.+.|.+|.++.+..
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~ 68 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA 68 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence 4688888865 7999999999999999999988753
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.71 E-value=0.34 Score=36.70 Aligned_cols=78 Identities=18% Similarity=0.191 Sum_probs=59.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+||..|+++|--.++..+++ |.+|+.+.++++-.+...+.+...+ .++.++..|..+- .. .. +
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g---------~~-~~-~ 144 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG---------FP-PK-A 144 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---------CG-GG-C
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC---------Cc-cc-C
Confidence 47799999999999988888886 4679999999888777777777664 5788888887531 01 11 5
Q ss_pred CccEEEECCCCC
Q 024125 95 KLNILVNNVGTN 106 (272)
Q Consensus 95 ~id~li~~ag~~ 106 (272)
+.|.|+.+++..
T Consensus 145 pfD~Iiv~~a~~ 156 (215)
T d1jg1a_ 145 PYDVIIVTAGAP 156 (215)
T ss_dssp CEEEEEECSBBS
T ss_pred cceeEEeecccc
Confidence 799999888863
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.61 E-value=1.5 Score=34.98 Aligned_cols=115 Identities=17% Similarity=0.129 Sum_probs=67.9
Q ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCCC--eEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGT-RGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGF--VVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 16 ~~k~vlItGa~-~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
.|++||=.+++ |+++.+ ++..|+ .|+.++.+++.++...+.+..++. ++.++..|+. + .+..+...
T Consensus 145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~--~----~~~~~~~~ 214 (324)
T d2as0a2 145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF--E----EMEKLQKK 214 (324)
T ss_dssp TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH--H----HHHHHHHT
T ss_pred CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh--h----hhHHHHhc
Confidence 47888866654 444444 345676 799999999999988888877653 5677777752 1 22222222
Q ss_pred cCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEec
Q 024125 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFIS 153 (272)
Q Consensus 92 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vs 153 (272)
+.+.|+||.++....... .+.... ......+++.+++.++. +|.++..+
T Consensus 215 -~~~fD~Vi~DpP~~~~~~------~~~~~~----~~~y~~l~~~a~~ll~p--GG~lv~~s 263 (324)
T d2as0a2 215 -GEKFDIVVLDPPAFVQHE------KDLKAG----LRAYFNVNFAGLNLVKD--GGILVTCS 263 (324)
T ss_dssp -TCCEEEEEECCCCSCSSG------GGHHHH----HHHHHHHHHHHHTTEEE--EEEEEEEE
T ss_pred -cCCCCchhcCCccccCCH------HHHHHH----HHHHHHHHHHHHHHcCC--CcEEEEEe
Confidence 257999998876432221 111111 11233455566665543 36766665
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=92.58 E-value=0.19 Score=34.61 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=29.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
.+.++|.|| |.||.++|..|.+.|.+|.++.+.
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~ 58 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMM 58 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEee
Confidence 478888886 799999999999999999998764
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.49 E-value=0.33 Score=36.25 Aligned_cols=76 Identities=17% Similarity=-0.035 Sum_probs=57.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
++.+||=.|+++|. ++..|++.|++|+.++-+++.++...+.....+..+..+..|..+.. + ....
T Consensus 37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~-----~------~~~~ 102 (226)
T d1ve3a1 37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-----F------EDKT 102 (226)
T ss_dssp SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-----S------CTTC
T ss_pred CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc-----c------cCcC
Confidence 34678999998876 66788899999999999999888888777766666777777876532 0 0146
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
.|+|++....
T Consensus 103 fD~I~~~~~l 112 (226)
T d1ve3a1 103 FDYVIFIDSI 112 (226)
T ss_dssp EEEEEEESCG
T ss_pred ceEEEEecch
Confidence 8999877553
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=92.33 E-value=1.3 Score=31.57 Aligned_cols=71 Identities=11% Similarity=0.013 Sum_probs=40.2
Q ss_pred EEEEeCCCChHHHHHHHH-HHH-C----CCEEEEeeCChHHHHHHHHHHHh---CCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEE-LAG-L----GAVVHTCSRNEVELNKCLKEWQS---KGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~-l~~-~----G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
++.|.||++ +|...+-. +++ . +.++++.+.++++++......+. ....+. .. ++.++ .+
T Consensus 2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~---~t-~~~~~---~l---- 69 (162)
T d1up7a1 2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL---IS-DTFEG---AV---- 69 (162)
T ss_dssp EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE---EC-SSHHH---HH----
T ss_pred EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEE---Ee-cCccc---cc----
Confidence 577888865 55444422 322 1 35899999999987754433222 122222 11 22221 12
Q ss_pred HHcCCCccEEEECCCC
Q 024125 90 SKFNGKLNILVNNVGT 105 (272)
Q Consensus 90 ~~~~~~id~li~~ag~ 105 (272)
...|++|..||.
T Consensus 70 ----~~aDvVVita~~ 81 (162)
T d1up7a1 70 ----VDAKYVIFQFRP 81 (162)
T ss_dssp ----TTCSEEEECCCT
T ss_pred ----CCCCEEEEeccc
Confidence 468999999986
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=92.26 E-value=1.5 Score=32.27 Aligned_cols=144 Identities=15% Similarity=0.079 Sum_probs=77.9
Q ss_pred CCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 15 LKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 15 l~~k~vlItGa--~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
..+.++++... ......+++..|.+.|..++.+.-..+ .+.+.. .+.+ ...
T Consensus 23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~~l---~~~~-~~~ 75 (209)
T d2fr1a2 23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRDEL---AERL-RSV 75 (209)
T ss_dssp CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHHHH---HHHH-TTS
T ss_pred CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHHHH---HHHh-hcc
Confidence 44555555433 234677788888888887765543221 122222 2222 222
Q ss_pred CCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCCCCCCCCCChhhHHHHH
Q 024125 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (272)
Q Consensus 93 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~~~~~~~~~~~Y~~sK~ 172 (272)
+.++.||+..+......-.. + . ....+...+.++|++.. .....++.+++...... ......-+...+
T Consensus 76 -~~~~~vv~l~~~~~~~~~~~-~--~----~~~~~~~~l~l~qal~~---~~~~~~l~~vT~~a~~~-~~~d~~~~p~~A 143 (209)
T d2fr1a2 76 -GEVAGVLSLLAVDEAEPEEA-P--L----ALASLADTLSLVQAMVS---AELGCPLWTVTESAVAT-GPFERVRNAAHG 143 (209)
T ss_dssp -CCCSEEEECTTTTCCCCSSC-G--G----GCHHHHHHHHHHHHHHH---TTCCCCEEEEEESCSCS-STTSCCSCGGGH
T ss_pred -CCCCeEEEeCCCCCCCCcch-h--H----HHHHHHHHHHHHHHHHh---CCCCCcEEEEEcCCccc-CCCcccCCHhHH
Confidence 56888888876532222111 1 1 11224455666666533 23335666665433211 122233356789
Q ss_pred HHHHHHHHHHHHHccCCeeEEEeeC
Q 024125 173 AMNQLTRNLACEWAKDNIRTNSVAP 197 (272)
Q Consensus 173 a~~~~~~~la~el~~~~i~v~~v~P 197 (272)
++.+|.|+++.|+....++...+.+
T Consensus 144 ~l~Gl~r~~~~E~P~l~~~~vDl~~ 168 (209)
T d2fr1a2 144 ALWGVGRVIALENPAVWGGLVDVPA 168 (209)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEECT
T ss_pred hHHHHHHHHHHhCCCceEEEEECCC
Confidence 9999999999998766666666643
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.18 E-value=0.84 Score=31.80 Aligned_cols=84 Identities=13% Similarity=0.077 Sum_probs=53.2
Q ss_pred CCCEEEEeCCC---ChHHHHHHHHHHHCCCEEEEeeCChHHHH--HHHHHHHhCC--CeEEEEEecCCCHHHHHHHHHHH
Q 024125 16 KGMTALVTGGT---RGIGQATVEELAGLGAVVHTCSRNEVELN--KCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 16 ~~k~vlItGa~---~giG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
+-|.|.|.|++ +..|..+.+.|.+.|++|+.+..+..... .....+.+-. .++..+ ....+.+.++++++
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i---~vp~~~~~~~~~e~ 94 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL---FVKPKLTMEYVEQA 94 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE---CSCHHHHHHHHHHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE---EeCHHHHHHHHHHH
Confidence 46899999999 67999999999999999998865432111 0011111111 122111 23467777788887
Q ss_pred HHHcCCCccEEEECCCC
Q 024125 89 GSKFNGKLNILVNNVGT 105 (272)
Q Consensus 89 ~~~~~~~id~li~~ag~ 105 (272)
.+. .+..++...|.
T Consensus 95 ~~~---g~k~v~~~~G~ 108 (139)
T d2d59a1 95 IKK---GAKVVWFQYNT 108 (139)
T ss_dssp HHH---TCSEEEECTTC
T ss_pred HHh---CCCEEEEeccc
Confidence 765 36677777774
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=92.06 E-value=0.46 Score=35.73 Aligned_cols=79 Identities=20% Similarity=0.220 Sum_probs=57.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+||-.|+++|--.++..++...+..|+.++.+++..+...+.+...+ .++.++..|..+.- . .. +
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~-----~-----~~-~ 143 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-----P-----EF-S 143 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-----G-----GG-C
T ss_pred ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc-----c-----cc-c
Confidence 47799999988887776666666566799999999999888888877653 35666666654310 1 11 4
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
+.|.|+.+++.
T Consensus 144 ~fD~I~~~~~~ 154 (213)
T d1dl5a1 144 PYDVIFVTVGV 154 (213)
T ss_dssp CEEEEEECSBB
T ss_pred chhhhhhhccH
Confidence 69999998875
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.03 E-value=0.15 Score=38.29 Aligned_cols=39 Identities=13% Similarity=0.092 Sum_probs=32.9
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
+|.|. |.|.+|..+|..|+++|.+|++++.++++.+.+.
T Consensus 2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln 40 (202)
T d1mv8a2 2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN 40 (202)
T ss_dssp EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence 45566 6789999999999999999999999988766553
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=92.00 E-value=0.14 Score=38.01 Aligned_cols=39 Identities=23% Similarity=0.341 Sum_probs=34.3
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
..++.++++.|.| .|.||+++++.+..-|.+|+..++..
T Consensus 39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d2naca1 39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR 77 (188)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence 4578999999998 57899999999998999999999854
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=91.95 E-value=0.13 Score=39.22 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=30.3
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
+.|+|+|.|| |-.|..+|..|+++|.+|.++.|+.
T Consensus 5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4567888887 6899999999999999999999853
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=91.90 E-value=0.73 Score=33.67 Aligned_cols=80 Identities=13% Similarity=0.095 Sum_probs=55.1
Q ss_pred CCCCCEEE-EeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCC--CeEEEEEecCCCHHHHHHHHHHHH
Q 024125 14 SLKGMTAL-VTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 14 ~l~~k~vl-ItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.++|++|| +..|+|.+|.+ .+.+|+ .|+.++.+.+..+.+.+.++..+ .++.++..|+. +.+++..
T Consensus 39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~ 108 (182)
T d2fhpa1 39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFY 108 (182)
T ss_dssp CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHH
T ss_pred hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhc
Confidence 46788888 55666667775 445888 69999999998888887776443 36777887752 2344433
Q ss_pred HHcCCCccEEEECCC
Q 024125 90 SKFNGKLNILVNNVG 104 (272)
Q Consensus 90 ~~~~~~id~li~~ag 104 (272)
+.- .+.|+|+..+-
T Consensus 109 ~~~-~~fDlIflDPP 122 (182)
T d2fhpa1 109 EEK-LQFDLVLLDPP 122 (182)
T ss_dssp HTT-CCEEEEEECCC
T ss_pred ccC-CCcceEEechh
Confidence 332 47899997764
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=91.87 E-value=1 Score=31.62 Aligned_cols=77 Identities=10% Similarity=0.055 Sum_probs=53.1
Q ss_pred CCCCCEEEEeCCCCh-HHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhCC--CeEEEEEecCCCHHHHHHHHHHHH
Q 024125 14 SLKGMTALVTGGTRG-IGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 14 ~l~~k~vlItGa~~g-iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.++|++||=.|+++| +|.+ .+.+|+ +|+.++.+.+..+...+.++..+ .++.+++.|.. ..++
T Consensus 12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~------~~l~--- 78 (152)
T d2esra1 12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAE------RAID--- 78 (152)
T ss_dssp CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHH------HHHH---
T ss_pred hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccc------cccc---
Confidence 478999985555544 5553 456787 89999999998888888777553 45888888742 1222
Q ss_pred HHcCCCccEEEECCC
Q 024125 90 SKFNGKLNILVNNVG 104 (272)
Q Consensus 90 ~~~~~~id~li~~ag 104 (272)
....+.|+|+..+.
T Consensus 79 -~~~~~fDiIf~DPP 92 (152)
T d2esra1 79 -CLTGRFDLVFLDPP 92 (152)
T ss_dssp -HBCSCEEEEEECCS
T ss_pred -ccccccceeEechh
Confidence 22257999987763
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=91.62 E-value=0.78 Score=32.38 Aligned_cols=83 Identities=10% Similarity=-0.011 Sum_probs=52.3
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC------CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
|-+.|- |-+|..+|+.|++.|..+ ...|+.++..+..++.... -.....+-..+.+.+.+....+.+....
T Consensus 3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~- 79 (156)
T d2cvza2 3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL- 79 (156)
T ss_dssp EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC-
T ss_pred EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc-
Confidence 445555 899999999999988765 5677777776666554211 0111222334556677777777776654
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
.+-.++|.+...
T Consensus 80 ~~~~~iid~sT~ 91 (156)
T d2cvza2 80 REGTYWVDATSG 91 (156)
T ss_dssp CTTEEEEECSCC
T ss_pred cccccccccccC
Confidence 345666666653
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.44 E-value=0.44 Score=38.02 Aligned_cols=74 Identities=15% Similarity=0.087 Sum_probs=51.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++||+||-.|++.|+ ++..+++.|+ +|+.++.++.. ....+..... ..++.++..|+.+...
T Consensus 34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------- 98 (311)
T d2fyta1 34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------- 98 (311)
T ss_dssp TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC-----------
T ss_pred CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC-----------
Confidence 579999999999886 5666778887 79999987754 3334343333 3468888888766421
Q ss_pred cCCCccEEEECC
Q 024125 92 FNGKLNILVNNV 103 (272)
Q Consensus 92 ~~~~id~li~~a 103 (272)
...+.|+|+...
T Consensus 99 ~~~~~D~Ivse~ 110 (311)
T d2fyta1 99 PVEKVDVIISEW 110 (311)
T ss_dssp SCSCEEEEEECC
T ss_pred ccccceEEEEee
Confidence 014789998753
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=91.37 E-value=1.1 Score=32.58 Aligned_cols=75 Identities=25% Similarity=0.192 Sum_probs=53.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC--CeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+|.+||=.|+++| .++..+++.+.+|+.++.+++.++...+.++..+ .++.++..|.. +.. ...
T Consensus 33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~------~~~----~~~- 98 (186)
T d1l3ia_ 33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP------EAL----CKI- 98 (186)
T ss_dssp TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH------HHH----TTS-
T ss_pred CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh------hcc----ccc-
Confidence 4788887777776 3344566677899999999999999988887765 47888888741 111 112
Q ss_pred CCccEEEECCC
Q 024125 94 GKLNILVNNVG 104 (272)
Q Consensus 94 ~~id~li~~ag 104 (272)
..+|.++.+..
T Consensus 99 ~~~D~v~~~~~ 109 (186)
T d1l3ia_ 99 PDIDIAVVGGS 109 (186)
T ss_dssp CCEEEEEESCC
T ss_pred CCcCEEEEeCc
Confidence 47899987654
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=91.37 E-value=0.18 Score=37.17 Aligned_cols=38 Identities=18% Similarity=0.105 Sum_probs=32.9
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
...+.|+|+|.|| |.-|.+.|..|+++|++|.++.+..
T Consensus 39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence 3456899999997 6889999999999999999998754
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=91.35 E-value=0.46 Score=31.95 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=26.1
Q ss_pred CCEEEEeCCCChHHHHHHHHHHH---CCCEEEEeeCCh
Q 024125 17 GMTALVTGGTRGIGQATVEELAG---LGAVVHTCSRNE 51 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~---~G~~v~~~~r~~ 51 (272)
.++++|.|| |.+|.++|..|.+ +|.+|.++.|.+
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 578889988 8999999976654 456788887643
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=91.25 E-value=1.2 Score=31.97 Aligned_cols=78 Identities=9% Similarity=0.014 Sum_probs=48.0
Q ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGT-RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~-~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
+|++||=.|++ |.+|. ..+.+|++|+.++.+++..+.+.+.++..+....+...| .+.. ....... ..
T Consensus 41 ~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d~~---~~~~~~~-~~ 109 (171)
T d1ws6a1 41 RRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALP---VEVF---LPEAKAQ-GE 109 (171)
T ss_dssp TCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSC---HHHH---HHHHHHT-TC
T ss_pred CCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeee---hhcc---ccccccc-CC
Confidence 57778755544 44443 455689999999999999888887777654433333322 2222 2222222 25
Q ss_pred CccEEEECCC
Q 024125 95 KLNILVNNVG 104 (272)
Q Consensus 95 ~id~li~~ag 104 (272)
+.|+|+.++-
T Consensus 110 ~fD~If~DPP 119 (171)
T d1ws6a1 110 RFTVAFMAPP 119 (171)
T ss_dssp CEEEEEECCC
T ss_pred ccceeEEccc
Confidence 7999998763
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=91.15 E-value=0.15 Score=39.60 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=30.8
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS 48 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~ 48 (272)
+++||+|+|-| .|-+|+++++.|.+.|++|+.++
T Consensus 28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs 61 (242)
T d1v9la1 28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS 61 (242)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence 68999999997 78999999999999999987665
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=91.00 E-value=0.18 Score=37.47 Aligned_cols=40 Identities=20% Similarity=0.167 Sum_probs=34.3
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~ 52 (272)
..++.||++.|.|. |.||+++++.+..-|.+|+..++...
T Consensus 42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 81 (191)
T d1gdha1 42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA 81 (191)
T ss_dssp BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred cceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence 35688999999986 79999999999999999999987544
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=90.97 E-value=0.14 Score=40.12 Aligned_cols=35 Identities=31% Similarity=0.326 Sum_probs=31.2
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS 48 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~ 48 (272)
.+++||++.|.| .|-+|+.+++.|.+.|++|+.++
T Consensus 32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 568999999999 68999999999999999887653
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=90.92 E-value=0.3 Score=35.18 Aligned_cols=39 Identities=21% Similarity=0.387 Sum_probs=34.9
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~ 53 (272)
.+.||+++|.| -|-+|+.+|+.+...|++|+++..++-+
T Consensus 20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~ 58 (163)
T d1v8ba1 20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC 58 (163)
T ss_dssp CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh
Confidence 47899999987 5789999999999999999999998854
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.88 E-value=0.27 Score=36.22 Aligned_cols=41 Identities=27% Similarity=0.258 Sum_probs=35.3
Q ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH
Q 024125 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (272)
Q Consensus 12 ~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~ 53 (272)
..++.+|++.|.| .|.||+++++.+..-|.+|+..++....
T Consensus 39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~ 79 (184)
T d1ygya1 39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP 79 (184)
T ss_dssp BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence 4568899999998 5899999999998889999999986544
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=90.71 E-value=0.14 Score=39.93 Aligned_cols=33 Identities=21% Similarity=0.117 Sum_probs=28.6
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
+|+|+|.|| |--|...|..|+++|.+|.++.++
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~ 33 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE 33 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence 588999976 577899999999999999999764
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.52 E-value=0.13 Score=37.82 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=29.2
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE 51 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~ 51 (272)
+|+|+|.|| |-.|...|..|+++|+ +|.++.|+.
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~ 38 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE 38 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence 688899987 6899999999999998 588887754
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=90.42 E-value=0.26 Score=34.92 Aligned_cols=39 Identities=15% Similarity=0.028 Sum_probs=30.5
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
+|-|. |.|-+|+++++.|.++|.+|+..+++.+......
T Consensus 2 kIgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~ 40 (152)
T d1i36a2 2 RVGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER 40 (152)
T ss_dssp EEEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred EEEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence 34555 5599999999999999999999887766554443
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=90.32 E-value=1.6 Score=29.02 Aligned_cols=82 Identities=12% Similarity=0.001 Sum_probs=53.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
||+|||.--..-+-..+...|.+.|++|+....+.+..-+.. ++...++.+.-..+-+.+. -++++++++.. ..+
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~---~~~~~dliilD~~mp~~~G-~e~~~~ir~~~-~~~ 75 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKY---KELKPDIVTMDITMPEMNG-IDAIKEIMKID-PNA 75 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHCCSEEEEECSCGGGCH-HHHHHHHHHHC-TTC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHH---HhccCCEEEEecCCCCCCH-HHHHHHHHHhC-CCC
Confidence 789999999999999999999999999876655544333333 3333455554444444433 34566666665 456
Q ss_pred cEEEECC
Q 024125 97 NILVNNV 103 (272)
Q Consensus 97 d~li~~a 103 (272)
-+++..+
T Consensus 76 pvi~ls~ 82 (118)
T d1u0sy_ 76 KIIVCSA 82 (118)
T ss_dssp CEEEEEC
T ss_pred cEEEEEc
Confidence 6776554
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=90.27 E-value=3.5 Score=32.65 Aligned_cols=79 Identities=16% Similarity=0.072 Sum_probs=52.5
Q ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC---CeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 16 KGMTALVTG-GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 16 ~~k~vlItG-a~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++++||=.. ++|+++.+ ++..|++|+.++.+...++...+.+..++ .++.++..|+. +.++.....
T Consensus 132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~ 201 (309)
T d2igta1 132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR 201 (309)
T ss_dssp SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence 477888444 44544444 45679999999999999888887765442 35777777752 233333333
Q ss_pred cCCCccEEEECCCC
Q 024125 92 FNGKLNILVNNVGT 105 (272)
Q Consensus 92 ~~~~id~li~~ag~ 105 (272)
- .+.|+||..+-.
T Consensus 202 ~-~~fD~IilDPP~ 214 (309)
T d2igta1 202 G-STYDIILTDPPK 214 (309)
T ss_dssp T-CCBSEEEECCCS
T ss_pred C-CCCCEEEECCCc
Confidence 2 579999998754
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=90.19 E-value=0.21 Score=37.37 Aligned_cols=39 Identities=26% Similarity=0.269 Sum_probs=34.4
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~ 52 (272)
.+|.||++.|.|- |.||+.+++.+..-|++|+..++...
T Consensus 39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~ 77 (197)
T d1j4aa1 39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN 77 (197)
T ss_dssp CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence 4689999999985 79999999999999999999987653
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=90.14 E-value=0.96 Score=33.12 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=55.1
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCC-eEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVGSKFN 93 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (272)
+.+++||=.|++.|. .+..|+++|++|+.++-+++.++...+.....+. .+.+...|+.+.. +.
T Consensus 29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~------------~~ 93 (198)
T d2i6ga1 29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT------------FD 93 (198)
T ss_dssp SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC------------CC
T ss_pred CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc------------cc
Confidence 456789999996553 4567889999999999999988887777665543 4677777765432 11
Q ss_pred CCccEEEECCCC
Q 024125 94 GKLNILVNNVGT 105 (272)
Q Consensus 94 ~~id~li~~ag~ 105 (272)
+..|+|+.+...
T Consensus 94 ~~fD~I~~~~~~ 105 (198)
T d2i6ga1 94 GEYDFILSTVVM 105 (198)
T ss_dssp CCEEEEEEESCG
T ss_pred ccccEEEEeeee
Confidence 468999876644
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=89.89 E-value=0.09 Score=39.41 Aligned_cols=31 Identities=19% Similarity=0.240 Sum_probs=27.7
Q ss_pred CEEEEeCCCChHHH-----HHHHHHHHCCCEEEEee
Q 024125 18 MTALVTGGTRGIGQ-----ATVEELAGLGAVVHTCS 48 (272)
Q Consensus 18 k~vlItGa~~giG~-----~ia~~l~~~G~~v~~~~ 48 (272)
|+++|||.++|+|+ .+|+.|+++|.+|.+++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 78999999999998 67889999999998875
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=89.86 E-value=0.3 Score=36.33 Aligned_cols=41 Identities=20% Similarity=0.119 Sum_probs=35.3
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~ 52 (272)
...+|.||++.|.|. |.||+++++.+..-|++|+..++...
T Consensus 43 ~~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 83 (193)
T d1mx3a1 43 GAARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS 83 (193)
T ss_dssp TCCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred CceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence 346799999999965 79999999999999999999988644
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=89.78 E-value=1.8 Score=30.55 Aligned_cols=44 Identities=18% Similarity=0.176 Sum_probs=32.6
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCC--CEEEE--eeCChHHHHHHHHHH
Q 024125 18 MTALVTGGTRGIGQATVEELAGLG--AVVHT--CSRNEVELNKCLKEW 61 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G--~~v~~--~~r~~~~~~~~~~~~ 61 (272)
|++.|.|+||-||.....-+.++. .+|+. +.++-+.+.+...++
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f 49 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF 49 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence 679999999999999998887764 35544 346666666665555
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=89.67 E-value=0.24 Score=37.01 Aligned_cols=38 Identities=29% Similarity=0.297 Sum_probs=34.0
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.++.||++.|.|. |.||+++++.+..-|.+|+..++..
T Consensus 41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~ 78 (199)
T d1dxya1 41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP 78 (199)
T ss_dssp CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence 5789999999986 6899999999999999999999864
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.59 E-value=0.99 Score=34.11 Aligned_cols=79 Identities=15% Similarity=0.094 Sum_probs=59.1
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC------CCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
.|.+||-.|+++|--.++..++......|+.++++++-.+...+.+.+. ..++.+...|..+.. .
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~-----~---- 146 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-----A---- 146 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC-----G----
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc-----c----
Confidence 4789999999999888888888877789999999998888777776543 235666677753210 0
Q ss_pred HHcCCCccEEEECCCC
Q 024125 90 SKFNGKLNILVNNVGT 105 (272)
Q Consensus 90 ~~~~~~id~li~~ag~ 105 (272)
.. ++.|+|+.+++.
T Consensus 147 -~~-~~fD~I~~~~~~ 160 (224)
T d1i1na_ 147 -EE-APYDAIHVGAAA 160 (224)
T ss_dssp -GG-CCEEEEEECSBB
T ss_pred -hh-hhhhhhhhhcch
Confidence 11 478999998875
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.55 E-value=0.32 Score=36.93 Aligned_cols=77 Identities=13% Similarity=0.138 Sum_probs=54.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC------------------CCeEEEEEecCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK------------------GFVVSGSVCDAAS 77 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~~D~~~ 77 (272)
.+++||..|++.| ..+..|+++|++|+.++-+++.++...++.... +.++.+..+|+.+
T Consensus 45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 121 (229)
T d2bzga1 45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD 121 (229)
T ss_dssp CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence 5789999999887 457788999999999999998888776654321 2356677777643
Q ss_pred HHHHHHHHHHHHHHcCCCccEEEECCCC
Q 024125 78 PDQREKLIQEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~li~~ag~ 105 (272)
... ...+..|+|+.....
T Consensus 122 l~~----------~~~~~fd~i~~~~~l 139 (229)
T d2bzga1 122 LPR----------TNIGKFDMIWDRGAL 139 (229)
T ss_dssp GGG----------SCCCCEEEEEESSST
T ss_pred ccc----------cccCceeEEEEEEEE
Confidence 221 111457888776654
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=89.48 E-value=0.7 Score=35.07 Aligned_cols=75 Identities=19% Similarity=0.012 Sum_probs=52.6
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.|.+||-.|+++|--.++ |++.+.+|+.+.++++..+...+.+. ...++.++..|.... . . .. ++
T Consensus 70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g------~---~-~~-~p 134 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLG------Y---E-EE-KP 134 (224)
T ss_dssp TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGC------C---G-GG-CC
T ss_pred ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhc------c---h-hh-hh
Confidence 477899999998865444 55556789999999888776665544 345788888886431 0 0 11 57
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
.|.|+.+++.
T Consensus 135 fD~Iiv~~a~ 144 (224)
T d1vbfa_ 135 YDRVVVWATA 144 (224)
T ss_dssp EEEEEESSBB
T ss_pred HHHHHhhcch
Confidence 8999988875
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.40 E-value=0.32 Score=38.64 Aligned_cols=35 Identities=20% Similarity=0.162 Sum_probs=31.1
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS 48 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~ 48 (272)
.+|+||+|+|-|- |-+|+++|+.|.+.|++|+.++
T Consensus 32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs 66 (293)
T d1hwxa1 32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG 66 (293)
T ss_dssp SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 3689999999987 7999999999999999987764
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=88.93 E-value=1.4 Score=34.44 Aligned_cols=76 Identities=17% Similarity=0.156 Sum_probs=51.8
Q ss_pred CEEEEeCCCCh-HHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC--CeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 18 MTALVTGGTRG-IGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 18 k~vlItGa~~g-iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
++++-.|+++| |+.+++ + ...++|+.++.+++.++-..+.....+ .++.+...|+.+. ..... +
T Consensus 112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~-~ 178 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF-A 178 (271)
T ss_dssp CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT-T
T ss_pred cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc-C
Confidence 45665555555 555544 3 356799999999999988888877654 3667777777533 22222 5
Q ss_pred CccEEEECCCCC
Q 024125 95 KLNILVNNVGTN 106 (272)
Q Consensus 95 ~id~li~~ag~~ 106 (272)
++|+||.|+-..
T Consensus 179 ~fDlIVsNPPYI 190 (271)
T d1nv8a_ 179 SIEMILSNPPYV 190 (271)
T ss_dssp TCCEEEECCCCB
T ss_pred cccEEEEccccc
Confidence 899999999753
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=88.83 E-value=0.26 Score=35.26 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=29.2
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCCh
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNE 51 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~--~v~~~~r~~ 51 (272)
.||+|+|.|| |..|..+|..|.+.+. +|+++.+++
T Consensus 1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 4899999998 5789999999999874 788887654
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=88.75 E-value=0.92 Score=33.21 Aligned_cols=74 Identities=15% Similarity=0.082 Sum_probs=53.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC---CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 92 (272)
.+++||=.|+++| .++..+++.+.+|+.++-++...+...+.+... ..++.+...|..+. +.
T Consensus 52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~------~~------ 116 (194)
T d1dusa_ 52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN------VK------ 116 (194)
T ss_dssp TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT------CT------
T ss_pred CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh------hc------
Confidence 5789998888777 344556677889999999988888777766654 34678888887532 10
Q ss_pred CCCccEEEECCC
Q 024125 93 NGKLNILVNNVG 104 (272)
Q Consensus 93 ~~~id~li~~ag 104 (272)
....|+|+.+..
T Consensus 117 ~~~fD~Ii~~~p 128 (194)
T d1dusa_ 117 DRKYNKIITNPP 128 (194)
T ss_dssp TSCEEEEEECCC
T ss_pred cCCceEEEEccc
Confidence 146999998764
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=88.67 E-value=0.27 Score=37.66 Aligned_cols=35 Identities=23% Similarity=0.193 Sum_probs=29.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
+.++|+|.|| |--|..+|..|+++|.+|.++.|+.
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3477888887 5789999999999999999998864
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.53 E-value=0.72 Score=36.81 Aligned_cols=74 Identities=19% Similarity=0.142 Sum_probs=50.6
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++||+||-.|++.|+ ++..+++.|+ +|+.++.++. .....+....+ ..++.++..|..+.+.
T Consensus 32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------- 96 (316)
T d1oria_ 32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------- 96 (316)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC-----------
T ss_pred CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc-----------
Confidence 479999999999886 4556778887 6999987653 44444444443 3468888888866421
Q ss_pred cCCCccEEEECC
Q 024125 92 FNGKLNILVNNV 103 (272)
Q Consensus 92 ~~~~id~li~~a 103 (272)
...+.|+|+...
T Consensus 97 ~~~~~D~ivs~~ 108 (316)
T d1oria_ 97 PVEKVDIIISEW 108 (316)
T ss_dssp SSSCEEEEEECC
T ss_pred ccceeEEEeeee
Confidence 014689998754
|
| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=88.36 E-value=3 Score=29.33 Aligned_cols=82 Identities=15% Similarity=0.152 Sum_probs=53.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecC---CCHHHHHHHHHHHHHHc
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA---ASPDQREKLIQEVGSKF 92 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~ 92 (272)
+|+++.|.+.+||.|--++..+.+.|.++.-. +++..+++.+.+.... ..--..|+ .+.+...+.++.+.+.
T Consensus 2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~~~t~~~L~~~lp~~~--~~~NPlD~~~~~~~~~~~~~l~~~~~d- 76 (163)
T d2csua3 2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--EEKTIEELRSFLPPMA--AVKNPVDMIASARGEDYYRTAKLLLQD- 76 (163)
T ss_dssp SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--CHHHHHHHHHHSCTTC--EESSEEECCTTCCHHHHHHHHHHHHHS-
T ss_pred CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--CHHHHHHHHHhCCCcc--cCCCcccccCCCCHHHHHHHHHHHHcC-
Confidence 58899999999999999999999999766333 4444444444433221 01113343 4567788888777765
Q ss_pred CCCccEEEECC
Q 024125 93 NGKLNILVNNV 103 (272)
Q Consensus 93 ~~~id~li~~a 103 (272)
+.+|.++...
T Consensus 77 -~~vd~v~v~~ 86 (163)
T d2csua3 77 -PNVDMLIAIC 86 (163)
T ss_dssp -TTCSEEEEEE
T ss_pred -CCcCEEEEee
Confidence 4688765443
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=87.79 E-value=0.25 Score=38.22 Aligned_cols=31 Identities=29% Similarity=0.214 Sum_probs=27.3
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
|+|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 677765 7999999999999999999999864
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=87.76 E-value=0.53 Score=34.63 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=34.2
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
...++.++++.|.| .|.||+++++.+..-|.+|+..++..
T Consensus 38 ~~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d1sc6a1 38 GSFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN 77 (188)
T ss_dssp -CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence 34578999999995 68999999999999999999998754
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=87.72 E-value=0.69 Score=31.70 Aligned_cols=77 Identities=13% Similarity=0.071 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCC----------hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHH
Q 024125 16 KGMTALVTGGTR----------GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 16 ~~k~vlItGa~~----------giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 85 (272)
+-|+|||.|++. --+.+.+++|.+.|++++++..|++....-. +...++.+.+. ..+++.+++
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~aD~lYfePl---t~e~v~~Ii 78 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EMADATYIEPI---HWEVVRKII 78 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GGSSEEECSCC---CHHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hhcceeeeecC---CHHHHHHHH
Confidence 458999999953 4577889999999999999988876532111 11335554444 356666666
Q ss_pred HHHHHHcCCCccEEEECCCC
Q 024125 86 QEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~ 105 (272)
+. .++|.++-..|.
T Consensus 79 ~~------E~pd~il~~~GG 92 (127)
T d1a9xa3 79 EK------ERPDAVLPTMGG 92 (127)
T ss_dssp HH------HCCSEEECSSSH
T ss_pred HH------hCcCCeEEEeee
Confidence 54 479999877763
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=87.70 E-value=0.19 Score=33.49 Aligned_cols=40 Identities=20% Similarity=0.117 Sum_probs=32.0
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+.+++||+|+|.|++ -=|..+|..|++.+.++++..|+.
T Consensus 26 ~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~ 65 (107)
T d2gv8a2 26 EPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG 65 (107)
T ss_dssp CGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred chhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence 3457899999999986 678889999998887777666654
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=87.05 E-value=0.43 Score=35.77 Aligned_cols=41 Identities=17% Similarity=0.160 Sum_probs=33.1
Q ss_pred CCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 10 ~~~~~l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
.+.-+++||+|+|.|++. -|-.+|..++++++.++.+.|+.
T Consensus 25 ~~~~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~ 65 (235)
T d1w4xa2 25 HEPVDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTP 65 (235)
T ss_dssp SSCCCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCCCCCCCEEEEECCCc-cHHHHHHHHHhhhcccccccccc
Confidence 344568999999998765 58999999999999887777643
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=87.02 E-value=1.6 Score=28.93 Aligned_cols=33 Identities=24% Similarity=0.205 Sum_probs=26.0
Q ss_pred CCEEEEeCCCChHHHHHHHHHHH---CCCEEEEeeCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAG---LGAVVHTCSRN 50 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~---~G~~v~~~~r~ 50 (272)
.|+++|.|| |.+|.++|..|.+ .|.+|.++.|.
T Consensus 18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~ 53 (117)
T d1feca2 18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRG 53 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccc
Confidence 478888886 6999999987654 47889888774
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.87 E-value=0.16 Score=44.09 Aligned_cols=34 Identities=12% Similarity=0.146 Sum_probs=29.5
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeC
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSR 49 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r 49 (272)
|++.+|+|.|+ ||+|.++++.|+..|. .+.+++.
T Consensus 23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~ 57 (529)
T d1yova1 23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG 57 (529)
T ss_dssp HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence 56789999997 7999999999999997 7888764
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=86.86 E-value=0.4 Score=38.39 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=29.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
+.|+|+|.|| |--|..+|..|+++|.+|.++.++.
T Consensus 1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence 3688999987 5788999999999999999987654
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=86.62 E-value=0.59 Score=35.34 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=31.0
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
-.+|+|+|.|| |.-|...|..|+++|++|.++.++.
T Consensus 47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~ 82 (233)
T d1djqa3 47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE 82 (233)
T ss_dssp SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence 46799999997 5779999999999999999997643
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=86.52 E-value=0.51 Score=33.29 Aligned_cols=34 Identities=9% Similarity=-0.009 Sum_probs=26.5
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC----EEEEeeCCh
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA----VVHTCSRNE 51 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~----~v~~~~r~~ 51 (272)
|+|-|.||||-+|+.+.+.|+++.+ +++...++.
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~ 39 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ 39 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence 5788999999999999998887642 566666543
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=86.21 E-value=4.3 Score=28.86 Aligned_cols=115 Identities=7% Similarity=-0.068 Sum_probs=60.5
Q ss_pred EEEEeCC-CChHHHHHHHHHHHCC----CEEEEeeCChHH--HHHHHHH----HHhCCCeEEEEEecCCCHHHHHHHHHH
Q 024125 19 TALVTGG-TRGIGQATVEELAGLG----AVVHTCSRNEVE--LNKCLKE----WQSKGFVVSGSVCDAASPDQREKLIQE 87 (272)
Q Consensus 19 ~vlItGa-~~giG~~ia~~l~~~G----~~v~~~~r~~~~--~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~ 87 (272)
++.|.|| +.|.+..++.-+.... .++++.+.+++. ++..... ....+..+... ..+|..+ .+
T Consensus 3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td~~~---al-- 75 (169)
T d1s6ya1 3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLDRRR---AL-- 75 (169)
T ss_dssp EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESCHHH---HH--
T ss_pred EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCCchh---hc--
Confidence 4666666 5567777776665432 389999987754 3332211 12223333322 2333322 12
Q ss_pred HHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHH------------------hHHHHHHHHHHHHHHHcC-CCCe
Q 024125 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTN------------------FESTYHLCQLVYPLLKAS-GVGS 148 (272)
Q Consensus 88 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N------------------~~~~~~l~~~~~~~~~~~-~~g~ 148 (272)
..-|++|+.|+... .+.+.+...+. ......+.+.+.+.+.+. +.+.
T Consensus 76 ------~gaDvVv~ta~~~~--------~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~ 141 (169)
T d1s6ya1 76 ------DGADFVTTQFRVGG--------LEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAW 141 (169)
T ss_dssp ------TTCSEEEECCCTTH--------HHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred ------CCCCEEEEccccCC--------CCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeE
Confidence 46899999998632 12222222211 223445556666666654 4567
Q ss_pred EEEecC
Q 024125 149 IVFISS 154 (272)
Q Consensus 149 ii~vsS 154 (272)
++++|-
T Consensus 142 ~i~vtN 147 (169)
T d1s6ya1 142 LINFTN 147 (169)
T ss_dssp EEECSS
T ss_pred EEEeCC
Confidence 777764
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=85.74 E-value=0.33 Score=38.23 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=30.0
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
..|+|+|.||+ --|...|..|+++|.+|.++.++.
T Consensus 29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45889999985 669999999999999999998754
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=85.20 E-value=0.56 Score=33.70 Aligned_cols=81 Identities=12% Similarity=0.229 Sum_probs=51.2
Q ss_pred CEEEEeCCCChHHHHHHHHHHHC-CCEEE-EeeCChHH-HH----HHH-------------HHHHhCCCeEEEEEecCCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGL-GAVVH-TCSRNEVE-LN----KCL-------------KEWQSKGFVVSGSVCDAAS 77 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~-G~~v~-~~~r~~~~-~~----~~~-------------~~~~~~~~~~~~~~~D~~~ 77 (272)
-+|.|.|++|.+|+++++...+. +.+++ .++|.... .. +.. +++. ...+ +-.|.|.
T Consensus 5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~-~~~D---ViIDFs~ 80 (162)
T d1diha1 5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK-DDFD---VFIDFTR 80 (162)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT-TSCS---EEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHh-cccc---eEEEecc
Confidence 47999999999999999999886 44543 34442211 00 000 0000 0112 3479999
Q ss_pred HHHHHHHHHHHHHHcCCCccEEEECCCC
Q 024125 78 PDQREKLIQEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~li~~ag~ 105 (272)
++...+.++...+. ++.+|+-..|.
T Consensus 81 p~~~~~~~~~a~~~---~~~~ViGTTG~ 105 (162)
T d1diha1 81 PEGTLNHLAFCRQH---GKGMVIGTTGF 105 (162)
T ss_dssp HHHHHHHHHHHHHT---TCEEEECCCCC
T ss_pred HHHHHHHHHHHHhc---cceeEEecCCC
Confidence 99999998876653 57788766663
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=85.05 E-value=0.35 Score=36.46 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=30.0
Q ss_pred CCCEEEEeCCCChHHH-----HHHHHHHHCCCEEEEeeCC
Q 024125 16 KGMTALVTGGTRGIGQ-----ATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 16 ~~k~vlItGa~~giG~-----~ia~~l~~~G~~v~~~~r~ 50 (272)
.+|+|.|+++-||.|+ ++|..|+++|.+|.+++-+
T Consensus 1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 3689999999999997 5778888999999999854
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.72 E-value=1.8 Score=34.44 Aligned_cols=75 Identities=15% Similarity=-0.004 Sum_probs=50.5
Q ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 024125 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSK 91 (272)
Q Consensus 15 l~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 91 (272)
++|++||-.|++.|+ ++..++++|+ .|+.++.++ ..+...+..... ..++.++..|+.+.. .
T Consensus 37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~-----------~ 101 (328)
T d1g6q1_ 37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH-----------L 101 (328)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-----------C
T ss_pred CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc-----------C
Confidence 579999999999885 4556678887 788898775 344444444443 346888888876542 0
Q ss_pred cCCCccEEEECCC
Q 024125 92 FNGKLNILVNNVG 104 (272)
Q Consensus 92 ~~~~id~li~~ag 104 (272)
...+.|+|+...-
T Consensus 102 ~~~~~D~i~se~~ 114 (328)
T d1g6q1_ 102 PFPKVDIIISEWM 114 (328)
T ss_dssp SSSCEEEEEECCC
T ss_pred cccceeEEEEEec
Confidence 0146899987553
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=84.65 E-value=1.4 Score=29.80 Aligned_cols=77 Identities=10% Similarity=-0.024 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCC----------hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHH
Q 024125 16 KGMTALVTGGTR----------GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (272)
Q Consensus 16 ~~k~vlItGa~~----------giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 85 (272)
..|+|||.|++. --+.+.++.|.+.|++++++..|++...--. +...++.+.+. ..+.+.+++
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----d~aD~lYfepl---t~e~v~~Ii 75 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----DTSDRLYFEPV---TLEDVLEIV 75 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----TSSSEEECCCC---SHHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----hhcCceEEccC---CHHHHHHHH
Confidence 458899999963 4567899999999999999988876522110 11235554443 356665555
Q ss_pred HHHHHHcCCCccEEEECCCC
Q 024125 86 QEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 86 ~~~~~~~~~~id~li~~ag~ 105 (272)
+. .++|.++...|.
T Consensus 76 ~~------E~p~~ii~~~GG 89 (121)
T d1a9xa4 76 RI------EKPKGVIVQYGG 89 (121)
T ss_dssp HH------HCCSEEECSSST
T ss_pred HH------hCCCEEEeehhh
Confidence 43 378988877764
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=84.65 E-value=0.98 Score=31.93 Aligned_cols=45 Identities=27% Similarity=0.234 Sum_probs=31.8
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCC--CEEEE--eeCChHHHHHHHHHH
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLG--AVVHT--CSRNEVELNKCLKEW 61 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G--~~v~~--~~r~~~~~~~~~~~~ 61 (272)
.|++.|.|+||-||.....-+.++- ++|+. +.++-+.+.+...++
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef 50 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT 50 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhh
Confidence 4899999999999999988887753 46554 345555555544443
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=84.50 E-value=0.71 Score=32.36 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=26.0
Q ss_pred CEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCC
Q 024125 18 MTALVTGGTRGIGQATVEELAGLGA---VVHTCSRN 50 (272)
Q Consensus 18 k~vlItGa~~giG~~ia~~l~~~G~---~v~~~~r~ 50 (272)
.+|-|.||||-+|+++.+.|.+++. ++..++.+
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~ 38 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA 38 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence 5789999999999999999986542 56655443
|
| >d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Thermus thermophilus [TaxId: 274]
Probab=84.25 E-value=5.6 Score=28.50 Aligned_cols=63 Identities=14% Similarity=0.039 Sum_probs=50.0
Q ss_pred HHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEECCC
Q 024125 38 AGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 38 ~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 104 (272)
...|..+++.+.+....+.+.+.+.+.+.++..++.++.+. +-++.++.+.+ |.+++||++--
T Consensus 28 ~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~-eR~~~l~~F~~---G~~~vLVaT~v 90 (174)
T d1c4oa2 28 AARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAF-KRQALIRDLRL---GHYDCLVGINL 90 (174)
T ss_dssp HHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHH-HHHHHHHHHHT---TSCSEEEESCC
T ss_pred HhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchH-HHHHHHHHHHC---CCeEEEEeeee
Confidence 35688999999999999999999999999999999988744 34455656553 68999998664
|
| >d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Sporulation response regulator Spo0F species: Bacillus subtilis [TaxId: 1423]
Probab=84.00 E-value=4.2 Score=26.87 Aligned_cols=81 Identities=9% Similarity=0.021 Sum_probs=52.6
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (272)
+|+|||.--...+-..+.+.|.+.|++|..+....+.++ .+++...++.+.-..+-+.+.+ ++++++++.. ..+
T Consensus 1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~----~~~~~~~dlillD~~mP~~~G~-el~~~lr~~~-~~~ 74 (119)
T d1peya_ 1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALD----IVTKERPDLVLLDMKIPGMDGI-EILKRMKVID-ENI 74 (119)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHH----HHHHHCCSEEEEESCCTTCCHH-HHHHHHHHHC-TTC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHH----HHHhCCCCEEEEeccCCCCCHH-HHHHHHHHhC-CCC
Confidence 589999999999999999999999999987665444333 2333334454444444344433 4566676665 456
Q ss_pred cEEEECC
Q 024125 97 NILVNNV 103 (272)
Q Consensus 97 d~li~~a 103 (272)
-+++..+
T Consensus 75 pvi~lt~ 81 (119)
T d1peya_ 75 RVIIMTA 81 (119)
T ss_dssp EEEEEES
T ss_pred cEEEEec
Confidence 6666654
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=83.91 E-value=2.7 Score=31.51 Aligned_cols=79 Identities=10% Similarity=-0.003 Sum_probs=55.7
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CC----CEEEEeeCChHHHHHHHHHHHhC------CCeEEEEEecCCCHHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAG-LG----AVVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKL 84 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~-~G----~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~ 84 (272)
.+.+||..|+++|--.++..+++. .| .+|+.+.++++-.+...+.+... ..++.+...|..+..
T Consensus 80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~----- 154 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY----- 154 (223)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence 478999999999988888877764 34 48999999987776655544321 246788888864310
Q ss_pred HHHHHHHcCCCccEEEECCCC
Q 024125 85 IQEVGSKFNGKLNILVNNVGT 105 (272)
Q Consensus 85 ~~~~~~~~~~~id~li~~ag~ 105 (272)
... ++.|.|+.+++.
T Consensus 155 -----~~~-~~fD~Iiv~~a~ 169 (223)
T d1r18a_ 155 -----PPN-APYNAIHVGAAA 169 (223)
T ss_dssp -----GGG-CSEEEEEECSCB
T ss_pred -----ccc-cceeeEEEEeec
Confidence 011 579999998876
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=83.79 E-value=1.3 Score=33.01 Aligned_cols=81 Identities=15% Similarity=0.269 Sum_probs=53.4
Q ss_pred CCCCC-CCEEEEeCCCChHHH-HHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHHHHHHHHHH
Q 024125 12 RWSLK-GMTALVTGGTRGIGQ-ATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (272)
Q Consensus 12 ~~~l~-~k~vlItGa~~giG~-~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 89 (272)
...++ |.+||=.|+++|.-. ++++ +...| .|+.++-+++.++.+.+..+.. .++.++..|..++......+
T Consensus 51 ~l~lkpg~~VLDlGcG~G~~~~~la~-~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~~---- 123 (209)
T d1nt2a_ 51 RLKLRGDERVLYLGAASGTTVSHLAD-IVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV---- 123 (209)
T ss_dssp CCCCCSSCEEEEETCTTSHHHHHHHH-HTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC----
T ss_pred cCCCCCCCEEEEeCCcCCHHHHHHHH-hccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCcccccccc----
Confidence 34454 789998888877533 4443 33344 8999999999998887776554 46777888887765432111
Q ss_pred HHcCCCccEEEECC
Q 024125 90 SKFNGKLNILVNNV 103 (272)
Q Consensus 90 ~~~~~~id~li~~a 103 (272)
..+|++++..
T Consensus 124 ----~~vd~v~~~~ 133 (209)
T d1nt2a_ 124 ----EKVDLIYQDI 133 (209)
T ss_dssp ----CCEEEEEECC
T ss_pred ----ceEEEEEecc
Confidence 3567776643
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=83.72 E-value=2.5 Score=31.24 Aligned_cols=75 Identities=15% Similarity=0.061 Sum_probs=54.6
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
+++||=.|++.|.- +..++++|++|+.++-+++.++...+.+...+ .++.+...|..+.. +. .+.
T Consensus 16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~~------~~~ 81 (231)
T d1vl5a_ 16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----FT------DER 81 (231)
T ss_dssp CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----SC------TTC
T ss_pred cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-----cc------ccc
Confidence 68899999988854 35677889999999999988887776665543 46778888876531 10 146
Q ss_pred ccEEEECCCC
Q 024125 96 LNILVNNVGT 105 (272)
Q Consensus 96 id~li~~ag~ 105 (272)
.|+|++....
T Consensus 82 fD~v~~~~~l 91 (231)
T d1vl5a_ 82 FHIVTCRIAA 91 (231)
T ss_dssp EEEEEEESCG
T ss_pred cccccccccc
Confidence 8999887765
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=83.66 E-value=0.72 Score=32.68 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=25.7
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEee
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGA---VVHTCS 48 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~---~v~~~~ 48 (272)
|-+|-|.||||-.|+++.+.|.++.. ++..++
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~ 35 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 35 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence 44789999999999999999999864 444444
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=83.58 E-value=2.5 Score=30.64 Aligned_cols=107 Identities=15% Similarity=0.180 Sum_probs=53.4
Q ss_pred CCCCEEEEeCCCC-------------hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCCeEEEEEecCCCHHHH
Q 024125 15 LKGMTALVTGGTR-------------GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81 (272)
Q Consensus 15 l~~k~vlItGa~~-------------giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 81 (272)
+++|++++.|-|- |-+..+++.|-.++.+|+=.+..-.........
T Consensus 1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~--------------------- 59 (208)
T d2o14a2 1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND--------------------- 59 (208)
T ss_dssp CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS---------------------
T ss_pred CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh---------------------
Confidence 4689999999883 345555555555566664443322221111100
Q ss_pred HHHHHHHHHHcCCCccEEEECCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCeEEEecCCC
Q 024125 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (272)
Q Consensus 82 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~ii~vsS~~ 156 (272)
..+.++.... .+.|+|+.+.|..........+.+++.. |+. .++..+++.+ ..++.++...
T Consensus 60 -~~~~~~~~~~-~~~D~vvi~~G~ND~~~~~~~~~~~~~~----~l~-------~li~~~~~~~-~~~vl~~~~~ 120 (208)
T d2o14a2 60 -GQLEAILKYI-KPGDYFMLQLGINDTNPKHKESEAEFKE----VMR-------DMIRQVKAKG-ADVILSTPQG 120 (208)
T ss_dssp -SHHHHHHTTC-CTTCEEEEECCTGGGCGGGCCCHHHHHH----HHH-------HHHHHHHTTT-CEEEEECCCC
T ss_pred -hhHHHHHHhc-CCCCEEEEEcCCCcccccccccHHHHHH----HHH-------HHHHHHHhcC-Cceeeccccc
Confidence 0122333333 4579999888875433222334544433 322 2333334433 5677776543
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=83.56 E-value=0.66 Score=36.75 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=23.0
Q ss_pred CEEEEeCCCCh--H--HHHHHHHHHHCCCEEEEeeC
Q 024125 18 MTALVTGGTRG--I--GQATVEELAGLGAVVHTCSR 49 (272)
Q Consensus 18 k~vlItGa~~g--i--G~~ia~~l~~~G~~v~~~~r 49 (272)
|+|||++|+.| + ..+++++|.++|++|.+++.
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~ 36 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT 36 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 67777776544 1 34688999999999987654
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=83.52 E-value=0.58 Score=36.17 Aligned_cols=30 Identities=23% Similarity=0.245 Sum_probs=26.0
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
|+|.|| |-.|..+|.+|+++|.+|+++.+.
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~ 35 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF 35 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence 667765 688999999999999999999874
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=83.47 E-value=6.9 Score=30.16 Aligned_cols=75 Identities=19% Similarity=0.161 Sum_probs=46.4
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHH-----------hCCCeEEEEEecCCCHHHHHH
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQ-----------SKGFVVSGSVCDAASPDQREK 83 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~~~~ 83 (272)
+.+.|||.|+++|. +++++++++. +|.++.-+++-.+...+-+. ....++.++..|.. +
T Consensus 72 ~p~~vLiiG~G~G~---~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~------~ 142 (276)
T d1mjfa_ 72 KPKRVLVIGGGDGG---TVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGF------E 142 (276)
T ss_dssp CCCEEEEEECTTSH---HHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHH------H
T ss_pred CCceEEEecCCchH---HHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHH------H
Confidence 56899999998763 3344455544 78888887766554443221 12357787777752 1
Q ss_pred HHHHHHHHcCCCccEEEECCC
Q 024125 84 LIQEVGSKFNGKLNILVNNVG 104 (272)
Q Consensus 84 ~~~~~~~~~~~~id~li~~ag 104 (272)
.++ + . .+.|+||..+.
T Consensus 143 ~l~---~-~-~~yDvIi~D~~ 158 (276)
T d1mjfa_ 143 FIK---N-N-RGFDVIIADST 158 (276)
T ss_dssp HHH---H-C-CCEEEEEEECC
T ss_pred HHh---c-c-CCCCEEEEeCC
Confidence 222 2 2 57999998764
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.40 E-value=2.9 Score=28.51 Aligned_cols=33 Identities=21% Similarity=0.212 Sum_probs=25.9
Q ss_pred CCEEEEeCCCChHHHHHHHHHH----HCCCEEEEeeCC
Q 024125 17 GMTALVTGGTRGIGQATVEELA----GLGAVVHTCSRN 50 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~----~~G~~v~~~~r~ 50 (272)
.|+++|.|| |.+|.++|..|+ +.|.+|.++.+.
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~ 73 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPE 73 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccc
Confidence 578888866 899999988885 358899887663
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=82.97 E-value=0.86 Score=34.94 Aligned_cols=34 Identities=26% Similarity=0.259 Sum_probs=28.4
Q ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEee
Q 024125 14 SLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCS 48 (272)
Q Consensus 14 ~l~~k~vlItGa~~giG~~ia~~l~~~-G~~v~~~~ 48 (272)
+|+||+|+|-|- |-+|+++++.|++. |+.|+.+.
T Consensus 29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs 63 (239)
T d1gtma1 29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS 63 (239)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence 589999999998 56999999999864 88877654
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.89 E-value=0.61 Score=34.62 Aligned_cols=31 Identities=19% Similarity=0.079 Sum_probs=26.5
Q ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 024125 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (272)
Q Consensus 20 vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~ 51 (272)
|+|.| +|--|..+|..|+++|.+|.++.++.
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 67777 57888999999999999999998754
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.81 E-value=0.54 Score=36.59 Aligned_cols=33 Identities=15% Similarity=0.036 Sum_probs=29.5
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~ 52 (272)
.|+|.||+ -.|..+|..|+++|.+|.++.|+.+
T Consensus 4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 58899886 9999999999999999999998764
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=82.80 E-value=4.8 Score=26.64 Aligned_cols=82 Identities=16% Similarity=0.163 Sum_probs=47.6
Q ss_pred CEEEEeCCC---ChHHHHHHHHHHHCCCEEEEeeCChHHHHH--HHHHHHhCC--CeEEEEEecCCCHHHHHHHHHHHHH
Q 024125 18 MTALVTGGT---RGIGQATVEELAGLGAVVHTCSRNEVELNK--CLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGS 90 (272)
Q Consensus 18 k~vlItGa~---~giG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 90 (272)
|.+.|.|+| +-.|..+.+.|.+.|++|+.+..+.+.... ..+.+.+.. .++..+ ....+.+.++++++.+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi---~vp~~~~~~~l~~~~~ 78 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF---VVPPKVGLQVAKEAVE 78 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE---CSCHHHHHHHHHHHHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE---EeCHHHHHHHHHHHHh
Confidence 789999998 568999999999999999887643222110 000111111 122211 2345666667776665
Q ss_pred HcCCCccEEEECCCC
Q 024125 91 KFNGKLNILVNNVGT 105 (272)
Q Consensus 91 ~~~~~id~li~~ag~ 105 (272)
. .+..++...|.
T Consensus 79 ~---g~k~v~~~~g~ 90 (116)
T d1y81a1 79 A---GFKKLWFQPGA 90 (116)
T ss_dssp T---TCCEEEECTTS
T ss_pred c---CCceEEeccch
Confidence 3 35566655553
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=82.60 E-value=5.3 Score=27.22 Aligned_cols=34 Identities=18% Similarity=0.067 Sum_probs=29.3
Q ss_pred CCCEEEEeCCC---ChHHHHHHHHHHHCCCEEEEeeC
Q 024125 16 KGMTALVTGGT---RGIGQATVEELAGLGAVVHTCSR 49 (272)
Q Consensus 16 ~~k~vlItGa~---~giG~~ia~~l~~~G~~v~~~~r 49 (272)
+.|.+.|.|+| +..|..+.+.|.+.|+.++.+--
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~ 48 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP 48 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence 56899999999 56999999999999999887743
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=82.23 E-value=0.54 Score=36.13 Aligned_cols=31 Identities=23% Similarity=0.207 Sum_probs=27.0
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~ 50 (272)
.|+|.|| |--|...|..|+++|.+|.++.++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 32 (347)
T d2ivda1 2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS 32 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence 5788888 678999999999999999998764
|
| >d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=82.22 E-value=2.3 Score=31.83 Aligned_cols=40 Identities=18% Similarity=0.086 Sum_probs=31.2
Q ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHC--------------------CC-EEEEeeCCh
Q 024125 11 SRWSLKGMTALVTGGTRGIGQATVEELAGL--------------------GA-VVHTCSRNE 51 (272)
Q Consensus 11 ~~~~l~~k~vlItGa~~giG~~ia~~l~~~--------------------G~-~v~~~~r~~ 51 (272)
...++.+|+|+|.|+ |-++.-+|+.+++. |+ +|.+++|+.
T Consensus 33 ~~~~~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg 93 (225)
T d1cjca1 33 LAPDLSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 93 (225)
T ss_dssp CCCCTTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred cCccccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcC
Confidence 345678999988876 68999999999873 65 688887764
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=82.12 E-value=1 Score=33.02 Aligned_cols=38 Identities=18% Similarity=0.102 Sum_probs=30.4
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 024125 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~ 58 (272)
+|.|.| .|.+|..+|..|+ +|++|+.++-++++.+.+.
T Consensus 2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~ 39 (196)
T d1dlja2 2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN 39 (196)
T ss_dssp EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence 466665 7999999998665 7999999999988766544
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=82.04 E-value=0.71 Score=36.15 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=26.1
Q ss_pred EEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 024125 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (272)
Q Consensus 19 ~vlItGa~~giG~~ia~~l~~~G~-~v~~~~r~ 50 (272)
.|+|.|| |-+|.++|.+|+++|. +|.+++|+
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~ 34 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQG 34 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 3677776 5899999999999997 69999875
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=81.56 E-value=0.28 Score=34.61 Aligned_cols=37 Identities=16% Similarity=0.041 Sum_probs=26.6
Q ss_pred CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 024125 25 GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (272)
Q Consensus 25 a~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 61 (272)
|+|-+|+++++.|.+.+..+.+.+|+.++.+++.++.
T Consensus 6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~ 42 (153)
T d2i76a2 6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY 42 (153)
T ss_dssp SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence 4577999999988664444568899999988887654
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=81.47 E-value=1.6 Score=34.08 Aligned_cols=75 Identities=16% Similarity=0.049 Sum_probs=53.6
Q ss_pred CEEE-EeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCCC-eEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024125 18 MTAL-VTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (272)
Q Consensus 18 k~vl-ItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (272)
.++| +-.|||.||.+++..+ ..++|+.++-+++.++...+..+..+. ++.+++.|+-+.- .+.+
T Consensus 110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~------------~~~~ 175 (274)
T d2b3ta1 110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL------------AGQQ 175 (274)
T ss_dssp CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG------------TTCC
T ss_pred cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc------------CCCc
Confidence 3455 5555666777776654 356999999999998888887776654 5889999975431 1147
Q ss_pred ccEEEECCCCC
Q 024125 96 LNILVNNVGTN 106 (272)
Q Consensus 96 id~li~~ag~~ 106 (272)
+|+||.|+-..
T Consensus 176 fDlIvsNPPYi 186 (274)
T d2b3ta1 176 FAMIVSNPPYI 186 (274)
T ss_dssp EEEEEECCCCB
T ss_pred eeEEEecchhh
Confidence 99999998753
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=81.42 E-value=3.8 Score=31.73 Aligned_cols=45 Identities=20% Similarity=0.153 Sum_probs=35.9
Q ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC
Q 024125 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK 64 (272)
Q Consensus 17 ~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~ 64 (272)
+++||=.|++.|. ++..|+++|++|+.++-+++.++...+.....
T Consensus 57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~ 101 (292)
T d1xvaa_ 57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNR 101 (292)
T ss_dssp CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhc
Confidence 5789999988776 45667888999999999999888776665543
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=81.25 E-value=3.9 Score=31.23 Aligned_cols=78 Identities=21% Similarity=0.215 Sum_probs=55.9
Q ss_pred CCC-CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhC--CCeEEEEEecCCCHHHHHHHHHHH
Q 024125 13 WSL-KGMTALVTGGTRG-IGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (272)
Q Consensus 13 ~~l-~~k~vlItGa~~g-iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 88 (272)
.++ .|.+||=.|+++| +..++++.+. .+.+|+.++++++..+...+.+++. ..++.+...|+.+. +.
T Consensus 81 l~i~pG~rVLEiG~GsG~lt~~la~~v~-~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~------~~-- 151 (250)
T d1yb2a1 81 CGLRPGMDILEVGVGSGNMSSYILYALN-GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF------IS-- 151 (250)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHT-TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC------CC--
T ss_pred cCCCCcCEEEEeeeeCcHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecc------cc--
Confidence 445 4789999998877 4556666553 3459999999999999988888764 35788888887652 10
Q ss_pred HHHcCCCccEEEECC
Q 024125 89 GSKFNGKLNILVNNV 103 (272)
Q Consensus 89 ~~~~~~~id~li~~a 103 (272)
...+|.|+.+.
T Consensus 152 ----~~~fD~V~ld~ 162 (250)
T d1yb2a1 152 ----DQMYDAVIADI 162 (250)
T ss_dssp ----SCCEEEEEECC
T ss_pred ----cceeeeeeecC
Confidence 14689998654
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=80.87 E-value=3.1 Score=30.98 Aligned_cols=76 Identities=14% Similarity=0.027 Sum_probs=54.8
Q ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhCC-CeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024125 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (272)
Q Consensus 16 ~~k~vlItGa~~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (272)
.|.+||=.|++.|. ++..+++++.+|+.++-+++.++...+.+...+ .++.++..|..+.. +. .+
T Consensus 16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-----~~------~~ 81 (234)
T d1xxla_ 16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----FP------DD 81 (234)
T ss_dssp TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----SC------TT
T ss_pred CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-----cc------cc
Confidence 47889989988884 445667788999999999988887777666543 45888888876431 10 14
Q ss_pred CccEEEECCCC
Q 024125 95 KLNILVNNVGT 105 (272)
Q Consensus 95 ~id~li~~ag~ 105 (272)
..|+|+.+-..
T Consensus 82 ~fD~v~~~~~l 92 (234)
T d1xxla_ 82 SFDIITCRYAA 92 (234)
T ss_dssp CEEEEEEESCG
T ss_pred ccceeeeecee
Confidence 68988876554
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=80.77 E-value=1.1 Score=34.07 Aligned_cols=35 Identities=29% Similarity=0.275 Sum_probs=29.6
Q ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEee
Q 024125 13 WSLKGMTALVTGGTRGIGQATVEELAG-LGAVVHTCS 48 (272)
Q Consensus 13 ~~l~~k~vlItGa~~giG~~ia~~l~~-~G~~v~~~~ 48 (272)
.+++++++.|-| .|-+|+++++.|.+ .|+.|+.++
T Consensus 27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence 468999999986 78999999999975 599887664
|