Query 024127
Match_columns 272
No_of_seqs 205 out of 387
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 18:38:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024127.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024127hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 32.2 28 0.0021 23.2 4.2 20 85-104 31-50 (67)
2 d1q08a_ a.6.1.3 (A:) Transcrip 29.5 26 0.0019 24.3 3.9 25 82-106 44-68 (94)
3 d2azea1 e.63.1.1 (A:199-346) T 27.5 62 0.0045 24.7 6.1 18 81-98 10-27 (148)
4 d2azeb1 e.63.1.2 (B:201-301) T 25.5 58 0.0042 23.1 5.3 25 80-104 4-28 (101)
5 d2azea1 e.63.1.1 (A:199-346) T 21.3 50 0.0036 25.3 4.4 26 80-105 2-27 (148)
6 d2e74e1 f.23.24.1 (E:1-32) Pet 17.2 59 0.0043 18.2 2.9 13 217-229 11-23 (32)
7 d1nkpa_ a.38.1.1 (A:) Myc prot 16.1 1.2E+02 0.0084 20.2 5.1 23 82-104 57-79 (88)
8 d1nlwa_ a.38.1.1 (A:) Mad prot 13.6 1.2E+02 0.0085 19.7 4.4 25 81-105 51-75 (79)
9 d1yzma1 a.2.19.1 (A:456-501) F 12.6 92 0.0067 19.2 3.2 22 85-106 23-44 (46)
10 d1ew0a_ d.110.3.2 (A:) Histidi 12.1 44 0.0032 22.5 1.7 16 89-104 4-19 (130)
No 1
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.24 E-value=28 Score=23.21 Aligned_cols=20 Identities=45% Similarity=0.630 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 024127 85 KEKELQAKEAELRRREQDVR 104 (272)
Q Consensus 85 ke~EL~~rE~EL~rRE~el~ 104 (272)
-|+||++=...|+|.|+++.
T Consensus 31 iE~eLerCk~~irrLeqel~ 50 (67)
T d1k1fa_ 31 IEQELERAKASIRRLEQEVN 50 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555553
No 2
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=29.48 E-value=26 Score=24.28 Aligned_cols=25 Identities=24% Similarity=0.462 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 024127 82 LKKKEKELQAKEAELRRREQDVRRK 106 (272)
Q Consensus 82 l~~ke~EL~~rE~EL~rRE~el~~r 106 (272)
+.+|-+|+++|-+||++.+++|+.-
T Consensus 44 ~~~kl~~i~~kI~~L~~l~~~L~~l 68 (94)
T d1q08a_ 44 VQERLQEVEARIAELQSMQRSLQRL 68 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888888888888888888753
No 3
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.45 E-value=62 Score=24.74 Aligned_cols=18 Identities=11% Similarity=0.444 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 024127 81 DLKKKEKELQAKEAELRR 98 (272)
Q Consensus 81 el~~ke~EL~~rE~EL~r 98 (272)
|.+++.+++++|.++|++
T Consensus 10 E~~~~~erI~~K~~~Lqe 27 (148)
T d2azea1 10 ERQRRLERIKQKQSQLQE 27 (148)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 445555556666666654
No 4
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.53 E-value=58 Score=23.13 Aligned_cols=25 Identities=20% Similarity=0.222 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 024127 80 ADLKKKEKELQAKEAELRRREQDVR 104 (272)
Q Consensus 80 ~el~~ke~EL~~rE~EL~rRE~el~ 104 (272)
..|++--++|+.+|++|++.-+.++
T Consensus 4 ~~L~~El~~L~~~E~~LD~li~~~~ 28 (101)
T d2azeb1 4 EGLTQDLRQLQESEQQLDHLMNICT 28 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666677888888877554443
No 5
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.33 E-value=50 Score=25.33 Aligned_cols=26 Identities=12% Similarity=0.298 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024127 80 ADLKKKEKELQAKEAELRRREQDVRR 105 (272)
Q Consensus 80 ~el~~ke~EL~~rE~EL~rRE~el~~ 105 (272)
+|.++-++|.++|.+.++++.++|+.
T Consensus 2 Qe~~~Le~E~~~~~erI~~K~~~Lqe 27 (148)
T d2azea1 2 QECQNLEVERQRRLERIKQKQSQLQE 27 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666777888888888887777763
No 6
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=17.16 E-value=59 Score=18.17 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHHh
Q 024127 217 FLFYLLHIGFCIF 229 (272)
Q Consensus 217 F~~~~~~i~f~v~ 229 (272)
|+..++.++.-++
T Consensus 11 fialffgiavgii 23 (32)
T d2e74e1 11 FIALFFGIAVGII 23 (32)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhe
Confidence 3333344433333
No 7
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.15 E-value=1.2e+02 Score=20.19 Aligned_cols=23 Identities=26% Similarity=0.564 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 024127 82 LKKKEKELQAKEAELRRREQDVR 104 (272)
Q Consensus 82 l~~ke~EL~~rE~EL~rRE~el~ 104 (272)
|++..++|....++|+++.++|.
T Consensus 57 L~~~~~~l~~~~~~l~~~~~~L~ 79 (88)
T d1nkpa_ 57 VQAEEQKLISEEDLLRKRREQLK 79 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444443443
No 8
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.59 E-value=1.2e+02 Score=19.74 Aligned_cols=25 Identities=16% Similarity=0.441 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 024127 81 DLKKKEKELQAKEAELRRREQDVRR 105 (272)
Q Consensus 81 el~~ke~EL~~rE~EL~rRE~el~~ 105 (272)
+|++..++|...-++|.++-++|++
T Consensus 51 ~L~~~~~~l~~~~~~L~~~~~~L~~ 75 (79)
T d1nlwa_ 51 KLEDSDRKAVHQIDQLQREQRHLKR 75 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444443334443
No 9
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.62 E-value=92 Score=19.19 Aligned_cols=22 Identities=14% Similarity=0.367 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 024127 85 KEKELQAKEAELRRREQDVRRK 106 (272)
Q Consensus 85 ke~EL~~rE~EL~rRE~el~~r 106 (272)
|-+|.+-.|+.|+..++++.++
T Consensus 23 R~dEV~~Le~NLreLq~e~~~q 44 (46)
T d1yzma1 23 RMDEVRTLQENLRQLQDEYDQQ 44 (46)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhh
Confidence 4456666666666666665543
No 10
>d1ew0a_ d.110.3.2 (A:) Histidine kinase FixL heme domain {Rhizobium meliloti [TaxId: 382]}
Probab=12.05 E-value=44 Score=22.51 Aligned_cols=16 Identities=25% Similarity=0.474 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 024127 89 LQAKEAELRRREQDVR 104 (272)
Q Consensus 89 L~~rE~EL~rRE~el~ 104 (272)
|.+.|++|+++|+.++
T Consensus 4 l~~~e~~l~~~e~~~~ 19 (130)
T d1ew0a_ 4 MLETEDVVRARDAHLR 19 (130)
T ss_dssp HHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344555555555444
Done!