BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024130
(272 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DJ13|ZN830_XENTR Zinc finger protein 830 OS=Xenopus tropicalis GN=znf830 PE=2 SV=1
Length = 357
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 62/314 (19%)
Query: 2 DAARKKAI----FRAKLNAQKK----EKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDA 53
DA +KK + R + A+++ +KRI SPL +YN +C VC++ +KS+ W A
Sbjct: 3 DAGKKKLVQQEELRRLMKAKQRRSCSKKRIESPLAKYNSLGHLLCVVCNIQIKSELLWPA 62
Query: 54 HQASRKHHEAIKNIKAGATGNNTRVVSDAAKPEAGVDSSRSESGSASQNAELENSAKLGK 113
H ++H E + +K G+ + S + K + R GS +N E K +
Sbjct: 63 HILGKQHKEKVAELK----GSKANISSPSNKVQLHHIMKR--KGSEPENQE-SKRIKGTE 115
Query: 114 ARPPSV---LPSNFFDNQEVKRP-----KTDSVKL------------------VDPDST- 146
+P ++ LP FF+ +E K S+KL V+ ST
Sbjct: 116 DQPTALKTKLPEGFFETEETSSAKHAAEKAPSLKLLAGDYEDDDEVEGEEYENVNEASTS 175
Query: 147 --KPSGV-----SAKTQALKSVVLENEMDELPN-GNAVHAEKGQPFKEHPEKSKQNAGSE 198
KP+ + ++ L + E++M + + G+ + A+ + E + + +
Sbjct: 176 LQKPAEIPLPPPTSSADRLPADFFESKMPLVSHSGSVLKADIQEKIVERKDNTAE----- 230
Query: 199 AKQIKGALPEGFFDNKDADLLARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEEID 258
ALPEGFFD+ +AD R + K + E++E++K I++ + V D + EE +
Sbjct: 231 ------ALPEGFFDDPEADAKVRKVDAPKDQMDKEWEEFQKEIRQ-VNSVSDAIVAEEDE 283
Query: 259 AAEMIEEYESVDQK 272
+ + + +D++
Sbjct: 284 EGRLDRQIDEIDEQ 297
>sp|Q8R1N0|ZN830_MOUSE Zinc finger protein 830 OS=Mus musculus GN=Znf830 PE=1 SV=1
Length = 363
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 42/266 (15%)
Query: 7 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKN 66
+ + R K KRI SP +YN Q C +C+ +KS+ W H ++H E +
Sbjct: 22 RRLMREKQRLSTNRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAE 81
Query: 67 IKA--GAT-GNNTRVVSDAAKPEAG-VDSSRSESGSASQNAELE-----NSAKLGKAR-P 116
+K GAT G +T V A K A V+S ++ AS +++ +SA L AR
Sbjct: 82 LKGAKGATQGPSTGTVPQATKRRATDVESQDAKKAKASAGPQVQPSTSASSANLDAARAA 141
Query: 117 PS-----VLPSNFFDNQEVKRPKTDSVKLVDPDSTKPSGVSAKTQALKSVVLENEMDELP 171
PS +LP +D++E + + + D P K +L S E + LP
Sbjct: 142 PSKPGLGLLPD--YDDEEEEEEEGGGEERRDSSKHLPDA-QGKEHSLAS-PRETTSNVLP 197
Query: 172 NGNAVHAEKGQPFKEHPEKSKQ--NAGSEAK------------QIKGALPEGFFDNKDAD 217
N PF +P K+ ++GS K ALPEGFFD+ + D
Sbjct: 198 N---------DPFNTNPPKAPLVPHSGSIEKAEIHEKVVERRENTAEALPEGFFDDPEVD 248
Query: 218 LLARGIKPVKPDVKDEYKEYEKLIQE 243
R + K + E+ E++K +++
Sbjct: 249 AKVRKVDAPKDQMDKEWDEFQKAMRQ 274
>sp|Q63ZM9|ZN830_XENLA Zinc finger protein 830 OS=Xenopus laevis GN=znf830 PE=2 SV=1
Length = 356
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 106/272 (38%), Gaps = 54/272 (19%)
Query: 7 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKN 66
+ + +AK +KRI SPL +YN C VC+ ++KS+ W AH ++H E +
Sbjct: 16 RKLMKAKQRESSSKKRIESPLAKYNSLGHLSCVVCNSLIKSELLWPAHILGKQHKEKVAE 75
Query: 67 IKAGATGNNTRVVSDAAKPEAGVDSSRSESGSASQNAELENSAKLGKARPPSV----LPS 122
+K ++ P ++ R S+ + E+ G PS LP
Sbjct: 76 LKGTKATTSS--------PSNTIEYPRITKRKGSEPEKQESKRTKGSEDHPSASTTKLPE 127
Query: 123 NFFDNQEV------------------------------KRPKTDSVKLVDPDSTKPSGVS 152
FF+ ++ + K S L+ P +
Sbjct: 128 EFFEKEKTSSAGNAPSLKLLAGDYEDVDDDDAEEGEEYENAKEASSSLLKPAEIPLPPPT 187
Query: 153 AKTQALKSVVLENEMDELPN-GNAVHAEKGQPFKEHPEKSKQNAGSEAKQIKGALPEGFF 211
+ L + EN+M + + G+ + A+ + E E + + ALPEGFF
Sbjct: 188 SSADNLPADFFENKMPLVSHSGSVLKADIQEKIVERKENTAE-----------ALPEGFF 236
Query: 212 DNKDADLLARGIKPVKPDVKDEYKEYEKLIQE 243
D+ + D R + K + E++E++K I++
Sbjct: 237 DDPEVDAKVRKVDAPKDQMDKEWEEFQKEIRQ 268
>sp|Q3MHS2|ZN830_RAT Zinc finger protein 830 OS=Rattus norvegicus GN=Znf830 PE=2 SV=1
Length = 370
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 111/270 (41%), Gaps = 43/270 (15%)
Query: 7 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKN 66
+ + + K KRI SP +YN Q C +C+ +KS+ W H ++H E +
Sbjct: 22 RRLMKEKQRLSTNRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAE 81
Query: 67 IKA--GATGN-------------NTRVVS-DAAKPEAGVDSSRSESGSASQNAELEN--S 108
+K GAT T V S DA K +A VD + + ++S N E +
Sbjct: 82 LKGAKGATQGPSAGTAPQPTKRKTTDVESQDAKKAKASVDQVQPSTSASSANFEKSGKEA 141
Query: 109 AKLGKARPPSVLPSNFFDNQEVKRPKTDSVKLVDPDSTKP-SGVSAKTQALKSVVLENEM 167
++ ++ L ++ + +E + + DS+K + +L S E
Sbjct: 142 TRVASSKTGLGLLPDYEEEEEEEEEEELGGGEERRDSSKHLPDAQGREHSLAS-PRETTS 200
Query: 168 DELPNGNAVHAEKGQPFKEHPEKSKQ--NAGSEAK------------QIKGALPEGFFDN 213
+ LPN PF +P K+ ++GS K ALPEGFFD+
Sbjct: 201 NVLPN---------DPFNTNPPKAPLVPHSGSIEKAEIHEKVVERRENTAEALPEGFFDD 251
Query: 214 KDADLLARGIKPVKPDVKDEYKEYEKLIQE 243
+ D R + K + E+ E++K +++
Sbjct: 252 PEVDAKVRKVDAPKDQMDKEWDEFQKAMRQ 281
>sp|Q96NB3|ZN830_HUMAN Zinc finger protein 830 OS=Homo sapiens GN=ZNF830 PE=1 SV=2
Length = 372
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 7 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKN 66
+ + + K KRI SP +YN Q C +C+ +KS+ W H ++H E +
Sbjct: 22 RRLMKEKQRLSTSRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHREKVAE 81
Query: 67 IKAG 70
+K
Sbjct: 82 LKGA 85
>sp|Q6P0I6|ZN830_DANRE Zinc finger protein 830 OS=Danio rerio GN=znf830 PE=2 SV=1
Length = 326
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 19 KEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNT 76
++KR+ SP RY+ Q +C +CD +K+ W H ++H + ++ +K+ +T
Sbjct: 31 RQKRVESPFARYSGAGQLMCALCDAPVKNALLWQTHVLGKQHKDKLQELKSRTAPAHT 88
>sp|Q8AVN9|ZN346_XENLA Zinc finger protein 346 OS=Xenopus laevis GN=znf346 PE=1 SV=1
Length = 524
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 23 INSPLVRYNE--FDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKA 69
+NS L+R N F C+VC VL S+SQ AH SRKH ++ A
Sbjct: 20 VNS-LIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMA 67
>sp|Q96PM9|Z385A_HUMAN Zinc finger protein 385A OS=Homo sapiens GN=ZNF385A PE=2 SV=1
Length = 366
Score = 35.4 bits (80), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNTRVVSDAAKPEAGVDSSRSESG 97
C +C + S SQ +AH +H +K I+A T V + P + + G
Sbjct: 56 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 115
Query: 98 SASQNAELENSAKLGKA 114
A + +EN LG A
Sbjct: 116 VAPRPVSMENG--LGPA 130
>sp|B0JZ85|ZN346_XENTR Zinc finger protein 346 OS=Xenopus tropicalis GN=znf346 PE=2 SV=2
Length = 354
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 27 LVRYNE--FDQPVCRVCDVVLKSDSQWDAHQASRKH 60
L+R N F C+VC VL S+SQ AH SRKH
Sbjct: 23 LIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKH 58
>sp|Q8BXJ8|Z385B_MOUSE Zinc finger protein 385B OS=Mus musculus GN=Znf385b PE=2 SV=1
Length = 482
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNTRVV----------SDAAKPEA 87
C VC + SDSQ +AH KH + +K ++ AT N ++V S + +P
Sbjct: 171 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALE--ATKNKPKMVPSKDSAKANPSCSIRPGT 228
Query: 88 GVDSSRSE 95
G S +SE
Sbjct: 229 GDSSDKSE 236
>sp|Q569K4|Z385B_HUMAN Zinc finger protein 385B OS=Homo sapiens GN=ZNF385B PE=2 SV=1
Length = 471
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNTRVVS--DAAK--------PEA 87
C VC + SDSQ +AH KH + +K + AT N ++V D+AK P
Sbjct: 159 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALD--ATKNKPKMVPSKDSAKANPSCSITPIT 216
Query: 88 GVDSSRSE 95
G +S +SE
Sbjct: 217 GNNSDKSE 224
>sp|O88466|ZN106_MOUSE Zinc finger protein 106 OS=Mus musculus GN=Znf106 PE=1 SV=3
Length = 1888
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNTRVV 79
C +C +V S + D H S HH ++N+K + RV
Sbjct: 7 CILCHIVYGSKKEMDEHMRSMLHHRELENLKGRDISHECRVC 48
>sp|Q6PBT9|Z385B_DANRE Zinc finger protein 385B OS=Danio rerio GN=znf385b PE=2 SV=1
Length = 492
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 38 CRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNTRVVSDAAKPEAGVDSSRSESG 97
C +CDV + S+ Q H +SR+H + RV KP+ ++ +
Sbjct: 373 CEICDVHVNSEIQLKQHISSRRHKD--------------RVAGKPTKPKYS-PYNKQQRS 417
Query: 98 SASQNAELENSAKLGKARPPSVLPSNF 124
S+S A+L L K P+ LPS F
Sbjct: 418 SSSLAAKLALQNDLVKPISPAFLPSPF 444
>sp|Q8BL06|UBP54_MOUSE Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Mus musculus
GN=Usp54 PE=1 SV=2
Length = 1588
Score = 31.2 bits (69), Expect = 8.1, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 47/116 (40%), Gaps = 17/116 (14%)
Query: 93 RSESGSASQNAELENSAKLGKARPPSVLPSNFFDNQEVKRP-----------KTDSVKLV 141
R ESG S + L A P SV N + +Q KRP K+ S ++
Sbjct: 599 RMESGYESSERNSSSPVSLDAAPPDSV---NVYRDQSTKRPVGFVPSWRHIPKSHSSSIL 655
Query: 142 DPDSTKPSGVSAKTQALK--SVVLENEMDELPNGNAVHAEKGQPFKEHPEKSKQNA 195
+ D T P KTQ L V +E+DEL V + Q ++ EK + A
Sbjct: 656 EVDCTAPMTSWTKTQPLSDGEVTSRSELDELQE-EVVRRAQEQELRKKREKELEAA 710
>sp|Q9R0B7|ZN346_MOUSE Zinc finger protein 346 OS=Mus musculus GN=Znf346 PE=1 SV=1
Length = 294
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 1 MDAARKKAIFRAKLNAQKKEKRINSPLVRYNE--FDQPVCRVCDVVLKSDSQWDAHQASR 58
D R + ++ A AQ + +++ N+ F C+VC +L S+SQ AH S+
Sbjct: 36 FDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSK 95
Query: 59 KHHEAIKNIKA 69
KH +K A
Sbjct: 96 KHANKVKRYLA 106
>sp|P78688|AREA_GIBFU Nitrogen regulatory protein areA OS=Gibberella fujikuroi GN=AREA
PE=3 SV=1
Length = 971
Score = 31.2 bits (69), Expect = 8.7, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 14/180 (7%)
Query: 25 SPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKAGATGNNTRVVSDAAK 84
+PL R N QP+C C + LK H R IK G+ T V
Sbjct: 702 TPLWRRNPEGQPLCNACGLFLK------LHGVVRPLSLKTDVIKKRNRGSGTNV------ 749
Query: 85 PEAGVDSSRSESGSASQNAELENSAKLGKARPPSVLPSNFFDNQEVKRPKTDSVKLVDPD 144
G S+RS+ +++ N+ ++ + A S P++ V P S D
Sbjct: 750 -PVGGSSTRSKKTASTLNSRKNSTLSMSTATANSTKPNSSNPTPRVTTPPATSQPPSSKD 808
Query: 145 STKP-SGVSAKTQALKSVVLENEMDELPNGNAVHAEKGQPFKEHPEKSKQNAGSEAKQIK 203
P SG ++ S + P+ AV + P P K+ G+ + ++
Sbjct: 809 VDSPVSGTTSGANTAGSTPNSHFGGPGPSSGAVGGKGVVPIAAAPPKTSPGPGASSMSMQ 868
>sp|B2VA33|SYS_SULSY Serine--tRNA ligase OS=Sulfurihydrogenibium sp. (strain YO3AOP1)
GN=serS PE=3 SV=1
Length = 417
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 19/128 (14%)
Query: 116 PPSVLPSNFFDNQEVKRPKTDSVKLVDPDSTKPSGVSAKTQALKSVVLENEMDELPNGNA 175
P V P F ++ + K D K+ D D L + + NE D LP
Sbjct: 198 PALVKPEILFGTGQLPKFKDDLYKIEDEDLYLIPTAEVTLTNLHADEILNEED-LP---- 252
Query: 176 VHAEKGQPFKEHPEKSKQNAGSEAKQIKGALPEGFFDNKDADLLARGIKPVKPDVKDEYK 235
+ + + ++ AGS K +KG L + FD + +K VKP+ D Y
Sbjct: 253 ------KYYTAYTPCFRKEAGSHGKDVKGILRQHQFDKVEL------VKIVKPE--DSYN 298
Query: 236 EYEKLIQE 243
E EKL+ E
Sbjct: 299 ELEKLVNE 306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.125 0.340
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,438,532
Number of Sequences: 539616
Number of extensions: 4458059
Number of successful extensions: 16795
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 210
Number of HSP's that attempted gapping in prelim test: 16539
Number of HSP's gapped (non-prelim): 442
length of query: 272
length of database: 191,569,459
effective HSP length: 116
effective length of query: 156
effective length of database: 128,974,003
effective search space: 20119944468
effective search space used: 20119944468
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)