BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024133
(272 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|227937349|gb|ACP43315.1| 20S proteasome beta subunit 5 [Citrus maxima]
Length = 272
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA
Sbjct: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
KLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA
Sbjct: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
>gi|225425821|ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [Vitis vinifera]
gi|297738390|emb|CBI27591.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/272 (89%), Positives = 252/272 (92%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLDTSGLEST P FG+ EL SAAPSF LP +TDFD FQKD +K AKGTTTLA
Sbjct: 1 MKLDTSGLESTVPLFGANSELLGGFSAAPSFELPNTTDFDGFQKDAIQMVKPAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLD+GY++DMS+EEAAELARR+IYHATFRD ASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYRYDMSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWK 240
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
KLSGDDVGELHY YYPV PSTVEQEM EVAGA
Sbjct: 241 KLSGDDVGELHYKYYPVMPSTVEQEMVEVAGA 272
>gi|356516569|ref|XP_003526966.1| PREDICTED: proteasome subunit beta type-5-like [Glycine max]
Length = 272
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/272 (87%), Positives = 248/272 (91%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLDT+GLES +++ ELSAAPSF LP S DFD F K+ +K AKGTTTLA
Sbjct: 1 MKLDTTGLESFPTLLAPQNDVVGELSAAPSFDLPNSNDFDGFVKEAIQMVKPAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLDSGY++D+S+EEAAELARRAIYHATFRD ASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
KLSGDDVGELHYHYYPVTPSTVEQEM E GA
Sbjct: 241 KLSGDDVGELHYHYYPVTPSTVEQEMVEATGA 272
>gi|255646634|gb|ACU23791.1| unknown [Glycine max]
Length = 272
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/272 (87%), Positives = 248/272 (91%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLDT+GLES +++ ELSAAPSF LP S DFD F K+ +K AKGTTTLA
Sbjct: 1 MKLDTTGLESFPTLLAPQNDVVGELSAAPSFDLPNSNDFDGFVKEAIQMVKPAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT+AGGAADCQFWHRNLGIKCRL
Sbjct: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTVAGGAADCQFWHRNLGIKCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLDSGY++D+S+EEAAELARRAIYHATFRD ASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
KLSGDDVGELHYHYYPVTPSTVEQEM E GA
Sbjct: 241 KLSGDDVGELHYHYYPVTPSTVEQEMVEATGA 272
>gi|449452891|ref|XP_004144192.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
gi|449529978|ref|XP_004171974.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
Length = 272
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/272 (85%), Positives = 250/272 (91%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLDTSGL++T+P FG E +AAPSF +P S+DFD FQKD +K AKGTTTLA
Sbjct: 1 MKLDTSGLQTTAPLFGPTMEAMEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG+KCRL
Sbjct: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
H+LANKRRISV GASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HKLANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLD+GY++D+S+EEAAELARRAIYHATFRD ASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
KLSGDDVGELHY+YYPVTP+TV+QEM EV A
Sbjct: 241 KLSGDDVGELHYNYYPVTPTTVDQEMTEVTAA 272
>gi|356508794|ref|XP_003523139.1| PREDICTED: proteasome subunit beta type-5-like [Glycine max]
Length = 272
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/272 (87%), Positives = 246/272 (90%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLDT+ LES +++ ELSAAP F LP S DFD F KD +K AKGTTTLA
Sbjct: 1 MKLDTTSLESFPTLIAPQNDVAGELSAAPFFDLPNSNDFDGFLKDAIQMVKPAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLDSGY++D+S+EEAAELARRAIYHATFRD ASGGVASVYYVGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWK 240
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
KLSGDDVGELHYHYYPVTPSTVEQEM E GA
Sbjct: 241 KLSGDDVGELHYHYYPVTPSTVEQEMVEATGA 272
>gi|388515987|gb|AFK46055.1| unknown [Lotus japonicus]
Length = 270
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/270 (85%), Positives = 244/270 (90%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLDT+GLES G+++ E +A PSF LP S DFD F K+ +K AKGTTTLA
Sbjct: 1 MKLDTTGLESFPKLVAPGNDVVGEFTAPPSFELPNSNDFDGFVKEAIQMVKPAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFK+GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 61 FIFKDGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISVTGASK+LANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVTGASKMLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLDSGYK+DMS+EEAAELARRAIYHATFRD ASGGVASVY+VGPNGWK
Sbjct: 181 FSVGSGSPYAYGVLDSGYKYDMSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNGWK 240
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVA 270
KLSGDDVGELHYHY PV PSTVEQEM E A
Sbjct: 241 KLSGDDVGELHYHYNPVVPSTVEQEMVEAA 270
>gi|357463621|ref|XP_003602092.1| Proteasome subunit beta type [Medicago truncatula]
gi|355491140|gb|AES72343.1| Proteasome subunit beta type [Medicago truncatula]
Length = 271
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/269 (86%), Positives = 241/269 (89%)
Query: 3 LDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFI 62
LDT+ LES G + E+SA PSF LP S DFD F K+T +K AKGTTTLAFI
Sbjct: 2 LDTTALESFPSLISHGINVAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFI 61
Query: 63 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 122
FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE
Sbjct: 62 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 121
Query: 123 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS 182
LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG RFS
Sbjct: 122 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFS 181
Query: 183 VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKL 242
VGSGSPYAYGVLDSGYK+DMS+EEA+ELARRAIYHATFRD ASGGVASVYYVGP GWKKL
Sbjct: 182 VGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKL 241
Query: 243 SGDDVGELHYHYYPVTPSTVEQEMAEVAG 271
SGDDVGELHYHY PVTPSTVEQEM E AG
Sbjct: 242 SGDDVGELHYHYNPVTPSTVEQEMVEAAG 270
>gi|388492526|gb|AFK34329.1| unknown [Medicago truncatula]
Length = 271
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/269 (86%), Positives = 240/269 (89%)
Query: 3 LDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFI 62
LDT+ LES G + E+SA PSF LP S DFD F K+T +K AKGTTTLAFI
Sbjct: 2 LDTTALESFPSLISHGINVAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFI 61
Query: 63 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 122
FKEGVMVAADSRASMGGYISS SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE
Sbjct: 62 FKEGVMVAADSRASMGGYISSHSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 121
Query: 123 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS 182
LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG RFS
Sbjct: 122 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFS 181
Query: 183 VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKL 242
VGSGSPYAYGVLDSGYK+DMS+EEA+ELARRAIYHATFRD ASGGVASVYYVGP GWKKL
Sbjct: 182 VGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKL 241
Query: 243 SGDDVGELHYHYYPVTPSTVEQEMAEVAG 271
SGDDVGELHYHY PVTPSTVEQEM E AG
Sbjct: 242 SGDDVGELHYHYNPVTPSTVEQEMVEAAG 270
>gi|3914430|sp|O24361.1|PSB5_SPIOL RecName: Full=Proteasome subunit beta type-5; AltName: Full=20S
proteasome subunit E; AltName: Full=Proteasome epsilon
chain; Flags: Precursor
gi|2285800|dbj|BAA21650.1| 26S proteasome beta subunit [Spinacia oleracea]
Length = 272
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/272 (83%), Positives = 244/272 (89%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLDTSGLEST+P F D + L PSF LP TDFD FQK+ +K AKGTTTLA
Sbjct: 1 MKLDTSGLESTAPIFRRSDFVFDGLQMTPSFDLPNPTDFDGFQKEAVQMVKPAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 61 FIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISVTGASKLLANILY+YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG R
Sbjct: 121 HELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMR 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLD+GYK+DM++EEA+ELARRAIYHAT+RD ASGGV SVY+VGP+GWK
Sbjct: 181 FSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWK 240
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
K++GDDVG+LH+ YYPV P+TVEQEM EV GA
Sbjct: 241 KVTGDDVGDLHFQYYPVVPATVEQEMVEVVGA 272
>gi|15222152|ref|NP_172765.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
gi|3914425|sp|O23717.1|PSB5A_ARATH RecName: Full=Proteasome subunit beta type-5-A; AltName: Full=20S
proteasome beta subunit E-1; AltName: Full=Proteasome
component E; AltName: Full=Proteasome epsilon-1 chain;
Flags: Precursor
gi|4850389|gb|AAD31059.1|AC007357_8 Identical to gb|Y13695 multicatalytic endopeptidase complex,
proteasome precursor, beta subunit (prce) from
Arabidopsis thaliana. ESTs gb|Y09360, gb|F13852,
gb|T20555, gb|T44620, gb|AI099779 and gb|AA586183 come
from this gene [Arabidopsis thaliana]
gi|13194776|gb|AAK15550.1|AF348579_1 putative proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|2511596|emb|CAA74029.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|3421117|gb|AAC32072.1| 20S proteasome beta subunit PBE1 [Arabidopsis thaliana]
gi|23297641|gb|AAN12998.1| proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|332190844|gb|AEE28965.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
Length = 274
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/270 (84%), Positives = 243/270 (90%), Gaps = 2/270 (0%)
Query: 1 MKLDTSGLESTSPF--FGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
MKLDTSG E++ P FGS ++ ELS+ PSF LP + +FD FQK K LKHAKGTTT
Sbjct: 1 MKLDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTT 60
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC
Sbjct: 61 LAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 120
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG
Sbjct: 121 RLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKG 180
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
RFSVGSGSPYAYGVLDSGYK+DMS+EEA+ELARR+IYHATFRD ASGGVASVY+VGP G
Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEG 240
Query: 239 WKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268
W KLSGDDVGELHYHYYPV P+T EQ M E
Sbjct: 241 WTKLSGDDVGELHYHYYPVAPATAEQVMEE 270
>gi|15231544|ref|NP_189265.1| proteasome subunit beta type-5-B [Arabidopsis thaliana]
gi|75273433|sp|Q9LIP2.1|PSB5B_ARATH RecName: Full=Proteasome subunit beta type-5-B; AltName: Full=20S
proteasome beta subunit E-2; AltName: Full=Proteasome
epsilon-2 chain; Flags: Precursor
gi|16612308|gb|AAL27514.1|AF439846_1 AT3g26340/F20C19_6 [Arabidopsis thaliana]
gi|9294292|dbj|BAB02194.1| proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|21553804|gb|AAM62897.1| 26S proteasome beta subunit, putative [Arabidopsis thaliana]
gi|21928101|gb|AAM78079.1| AT3g26340/F20C19_6 [Arabidopsis thaliana]
gi|332643626|gb|AEE77147.1| proteasome subunit beta type-5-B [Arabidopsis thaliana]
Length = 273
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/272 (84%), Positives = 242/272 (88%), Gaps = 2/272 (0%)
Query: 1 MKLDTSGLESTSPF--FGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
MKLDTSGLE+T P FGS E+ S+APSF LP +TDFD FQK +K AKGTTT
Sbjct: 1 MKLDTSGLETTMPVIGFGSNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVKPAKGTTT 60
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC
Sbjct: 61 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 120
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG
Sbjct: 121 RLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKG 180
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
RFSVGSGSPYAYGVLDSGYKFDMS+EEA+ELARR+IYHATFRD ASGGVASVY+VGP G
Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQG 240
Query: 239 WKKLSGDDVGELHYHYYPVTPSTVEQEMAEVA 270
W KLSGDDVGELHYHYYPV P T E M E A
Sbjct: 241 WTKLSGDDVGELHYHYYPVAPITAEHVMEEAA 272
>gi|15292875|gb|AAK92808.1| putative proteasome epsilon chain precursor [Arabidopsis thaliana]
Length = 274
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/270 (84%), Positives = 243/270 (90%), Gaps = 2/270 (0%)
Query: 1 MKLDTSGLESTSPF--FGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
MKLDTSG E++ P FGS ++ ELS+ PSF LP + +FD FQK K LKHAKGTTT
Sbjct: 1 MKLDTSGFETSMPMIGFGSSSDVLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTT 60
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC
Sbjct: 61 LAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 120
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG
Sbjct: 121 RLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKG 180
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
RFSVGSGSPYAYGVLDSGYK+DMS+EEA+ELARR+IYHATFRD ASGGVASVY+VGP G
Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEG 240
Query: 239 WKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268
W KLSGDDVGELHYHYYPV P+T EQ M E
Sbjct: 241 WTKLSGDDVGELHYHYYPVAPATAEQVMEE 270
>gi|297844202|ref|XP_002889982.1| hypothetical protein ARALYDRAFT_471459 [Arabidopsis lyrata subsp.
lyrata]
gi|297335824|gb|EFH66241.1| hypothetical protein ARALYDRAFT_471459 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/270 (83%), Positives = 243/270 (90%), Gaps = 2/270 (0%)
Query: 1 MKLDTSGLESTSPF--FGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
MKLDTSG E++ P FGS ++ ELS+ PSF LP + +FD FQK+ K LKHAKGTTT
Sbjct: 1 MKLDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKEAKDMLKHAKGTTT 60
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC
Sbjct: 61 LAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 120
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG
Sbjct: 121 RLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKG 180
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
RFSVGSGSPYAYGVLDSGYK+DMS+EEA+ELARR+IYHATFRD ASGGVASVY+VGP G
Sbjct: 181 DRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEG 240
Query: 239 WKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268
W KLSGDDVGELHYHYYPV P+ EQ M E
Sbjct: 241 WTKLSGDDVGELHYHYYPVAPAIAEQVMEE 270
>gi|388500262|gb|AFK38197.1| unknown [Medicago truncatula]
Length = 271
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/269 (85%), Positives = 239/269 (88%)
Query: 3 LDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFI 62
LDT+ LES G + E+SA PSF LP S DFD F K+T +K AKGTTTLAFI
Sbjct: 2 LDTTALESFPSLISHGINVAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFI 61
Query: 63 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 122
FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE
Sbjct: 62 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 121
Query: 123 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS 182
LANKRRISVTGASKLLANILYSYRGMG SVGTMIAGWDETGPGLYYVDSEGGRLKG RFS
Sbjct: 122 LANKRRISVTGASKLLANILYSYRGMGSSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFS 181
Query: 183 VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKL 242
VGSGSPYAYGVLDSGYK+DMS+EEA+ELARRAIYHATFRD ASGGVASVYYVGP G KKL
Sbjct: 182 VGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGRKKL 241
Query: 243 SGDDVGELHYHYYPVTPSTVEQEMAEVAG 271
SGDDVGELHYHY PVTPSTVEQEM E AG
Sbjct: 242 SGDDVGELHYHYNPVTPSTVEQEMVEAAG 270
>gi|297818166|ref|XP_002876966.1| hypothetical protein ARALYDRAFT_484397 [Arabidopsis lyrata subsp.
lyrata]
gi|297322804|gb|EFH53225.1| hypothetical protein ARALYDRAFT_484397 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/273 (84%), Positives = 242/273 (88%), Gaps = 3/273 (1%)
Query: 1 MKLDTSGLESTSPF--FGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
MKLDTSGLE+T P FGS E+ S+ PSF LP +TDFD FQK +K AKGTTT
Sbjct: 1 MKLDTSGLETTMPVIGFGSNSEMLDGFSSVPSFDLPRTTDFDGFQKKAVEMVKPAKGTTT 60
Query: 59 LAFIFKEGVMVAADSRASMGGYIS-SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIK 117
LAFIFKEGVMVAADSRASMGGYI SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIK
Sbjct: 61 LAFIFKEGVMVAADSRASMGGYICMSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIK 120
Query: 118 CRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK 177
CRLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLK
Sbjct: 121 CRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLK 180
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
G RFSVGSGSPYAYGVLDSGYKFDMS+EEA+ELARR+IYHATFRD ASGGVASVY+VGP
Sbjct: 181 GDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQ 240
Query: 238 GWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVA 270
GWKKLSGDDVGELHYHYYPVTP T E M E A
Sbjct: 241 GWKKLSGDDVGELHYHYYPVTPVTAEHVMEEAA 273
>gi|224102305|ref|XP_002312631.1| predicted protein [Populus trichocarpa]
gi|222852451|gb|EEE89998.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/265 (85%), Positives = 240/265 (90%), Gaps = 1/265 (0%)
Query: 1 MKLDTSGLESTSPFFGS-GDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTL 59
MK DTSGLEST+ FG+ G EL SAAP+F LP +TDFD FQK+ +K AKGTTTL
Sbjct: 1 MKFDTSGLESTASVFGTAGSELVDGFSAAPAFELPTTTDFDGFQKEAVQMVKPAKGTTTL 60
Query: 60 AFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR 119
AFIFK+GV+VAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR
Sbjct: 61 AFIFKDGVIVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR 120
Query: 120 LHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT 179
LHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT
Sbjct: 121 LHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT 180
Query: 180 RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
RFSVGSGSPYAYG+LDSGY+FDMSIEEAAEL RRAIYHATFRD ASGGVASVYYVGP+GW
Sbjct: 181 RFSVGSGSPYAYGILDSGYRFDMSIEEAAELGRRAIYHATFRDGASGGVASVYYVGPDGW 240
Query: 240 KKLSGDDVGELHYHYYPVTPSTVEQ 264
KKLSGDDV ELHY+YYPV + +
Sbjct: 241 KKLSGDDVSELHYNYYPVVSTEASE 265
>gi|116790903|gb|ABK25785.1| unknown [Picea sitchensis]
Length = 271
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/270 (83%), Positives = 240/270 (88%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLD SGLE + S D LC S +PSF +P TDFD FQK +K AKGTTTLA
Sbjct: 1 MKLDLSGLEPATLHQRSDDNLCDVFSPSPSFKIPNDTDFDGFQKAALQMVKPAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFKEG+MVAADSRASMGGYISSQSVKKIIEINP++LGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 61 FIFKEGIMVAADSRASMGGYISSQSVKKIIEINPHLLGTMAGGAADCQFWHRNLGIKCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISVTGASKLLANILYSYRGMGLS+GTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVTGASKLLANILYSYRGMGLSIGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLDSGY++DM +EEAAELARR+IYHATFRD ASGGVASVYYVGP GWK
Sbjct: 181 FSVGSGSPYAYGVLDSGYRWDMPVEEAAELARRSIYHATFRDGASGGVASVYYVGPQGWK 240
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVA 270
KLSGDDVGELH+ YYPVT + VEQEM EV+
Sbjct: 241 KLSGDDVGELHFKYYPVTENVVEQEMVEVS 270
>gi|116791186|gb|ABK25888.1| unknown [Picea sitchensis]
Length = 271
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/269 (83%), Positives = 237/269 (88%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLD SGLE + S D LC S PSF +P DFD FQK +K AKGTTTLA
Sbjct: 1 MKLDLSGLEPATLHQLSNDNLCDVFSPTPSFEIPNDADFDGFQKAAVQMVKPAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFKEG+MVAADSRASMGGYISSQSVKKIIEINPY+LGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 61 FIFKEGIMVAADSRASMGGYISSQSVKKIIEINPYLLGTMAGGAADCQFWHRNLGIKCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLDSGY++DM +EEAAELARR+IYHATFRD ASGGVASVYYVGP GWK
Sbjct: 181 FSVGSGSPYAYGVLDSGYRWDMPVEEAAELARRSIYHATFRDGASGGVASVYYVGPQGWK 240
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEV 269
KLSGDDV ELH++YYPVT + VEQEM EV
Sbjct: 241 KLSGDDVAELHFNYYPVTENVVEQEMVEV 269
>gi|334182541|ref|NP_001184978.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
gi|332190845|gb|AEE28966.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
Length = 298
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/294 (77%), Positives = 243/294 (82%), Gaps = 26/294 (8%)
Query: 1 MKLDTSGLESTSPF--FGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
MKLDTSG E++ P FGS ++ ELS+ PSF LP + +FD FQK K LKHAKGTTT
Sbjct: 1 MKLDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTT 60
Query: 59 LAFIFKEGVMVAADSRASMGGYIS------------------------SQSVKKIIEINP 94
LAFIFK GVMVAADSRASMGGYIS SQSVKKIIEINP
Sbjct: 61 LAFIFKGGVMVAADSRASMGGYISVSSLKNSSKNMHPFDIVDFGRNTTSQSVKKIIEINP 120
Query: 95 YMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGT 154
YMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGT
Sbjct: 121 YMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGT 180
Query: 155 MIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRA 214
MIAGWDETGPGLYYVD+EGGRLKG RFSVGSGSPYAYGVLDSGYK+DMS+EEA+ELARR+
Sbjct: 181 MIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRS 240
Query: 215 IYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268
IYHATFRD ASGGVASVY+VGP GW KLSGDDVGELHYHYYPV P+T EQ M E
Sbjct: 241 IYHATFRDGASGGVASVYHVGPEGWTKLSGDDVGELHYHYYPVAPATAEQVMEE 294
>gi|449435051|ref|XP_004135309.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
gi|449494897|ref|XP_004159677.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
Length = 272
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/270 (83%), Positives = 240/270 (88%), Gaps = 1/270 (0%)
Query: 1 MKLDTSGLESTSPFFGSGD-ELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTL 59
MKLDTSGLES + G+G EL LS+APSF +P + +FD FQK+ +K AKGTTTL
Sbjct: 1 MKLDTSGLESATFLSGAGSTELLDGLSSAPSFGIPNARNFDGFQKEAIQMVKPAKGTTTL 60
Query: 60 AFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR 119
AF FKEGVMVAADSRASMGGYISSQS KKIIEIN YMLGTMAGGAADCQFWHRNLGIKCR
Sbjct: 61 AFTFKEGVMVAADSRASMGGYISSQSAKKIIEINSYMLGTMAGGAADCQFWHRNLGIKCR 120
Query: 120 LHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT 179
HEL NKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT
Sbjct: 121 RHELENKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT 180
Query: 180 RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
RFSVGSGSPYAY VLD+GY++D+S+EEAAELARRAIYHATFRD ASGGVASVY+VGPNGW
Sbjct: 181 RFSVGSGSPYAYCVLDNGYQYDLSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNGW 240
Query: 240 KKLSGDDVGELHYHYYPVTPSTVEQEMAEV 269
KKLSGDDVGELHY YYPV TVEQEM EV
Sbjct: 241 KKLSGDDVGELHYKYYPVVHDTVEQEMIEV 270
>gi|217073968|gb|ACJ85344.1| unknown [Medicago truncatula]
Length = 262
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/261 (86%), Positives = 233/261 (89%)
Query: 3 LDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFI 62
LDT+ LES G + E+SA PSF LP S DFD F K+T +K AKGTTTLAFI
Sbjct: 2 LDTTALESFPSLISHGINVAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFI 61
Query: 63 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 122
FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE
Sbjct: 62 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 121
Query: 123 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS 182
LANKRRISVTGASKLLANILYSYRGMG SVGTMIAGWDETGPGLYYVDSEGGRLKG RFS
Sbjct: 122 LANKRRISVTGASKLLANILYSYRGMGSSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFS 181
Query: 183 VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKL 242
VGSGSPYAYGVLDSGYK+DMS+EEA+ELARRAIYHATFRD ASGGVASVYYVGP G KKL
Sbjct: 182 VGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGRKKL 241
Query: 243 SGDDVGELHYHYYPVTPSTVE 263
SGDDVGELHYHY PVTPSTVE
Sbjct: 242 SGDDVGELHYHYNPVTPSTVE 262
>gi|224110734|ref|XP_002315619.1| predicted protein [Populus trichocarpa]
gi|222864659|gb|EEF01790.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/273 (83%), Positives = 239/273 (87%), Gaps = 5/273 (1%)
Query: 1 MKLDTSGLESTSPFFGS-GDELCPELSAA--PSFSLPLSTDFDEFQKDTKATLKHAKGTT 57
MK DTSGLESTS FG+ G EL SAA P+F LP + DFD FQK+ +K AKGTT
Sbjct: 1 MKFDTSGLESTSSVFGTAGRELVDGFSAAAAPAFELPTTKDFDGFQKEAVQMVKPAKGTT 60
Query: 58 TLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIK 117
TLAFIFKEGV+VAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIK
Sbjct: 61 TLAFIFKEGVIVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIK 120
Query: 118 CRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK 177
CRLHELANKRRISVTGASKLLANIL+SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK
Sbjct: 121 CRLHELANKRRISVTGASKLLANILFSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK 180
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
GTRFSVGSGSPYAYG+LDSGY+FDMSIEEAAEL RRAIYHATFRD ASGGVASVYYVG N
Sbjct: 181 GTRFSVGSGSPYAYGILDSGYRFDMSIEEAAELGRRAIYHATFRDGASGGVASVYYVGAN 240
Query: 238 GWKKLSGDDVGELHYHYYPVTPSTVEQ--EMAE 268
GW KLSGDDV ELHY YYPV + + +M E
Sbjct: 241 GWTKLSGDDVSELHYKYYPVVSAETSEPDQMVE 273
>gi|255547772|ref|XP_002514943.1| proteasome subunit beta type 5,8, putative [Ricinus communis]
gi|223545994|gb|EEF47497.1| proteasome subunit beta type 5,8, putative [Ricinus communis]
Length = 249
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/274 (78%), Positives = 224/274 (81%), Gaps = 27/274 (9%)
Query: 1 MKLDTSGLESTSPFFG--SGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
MKLDTSG EST+P FG S E+ SA SF LP+++DFD FQ + K TLKHAKGTTT
Sbjct: 1 MKLDTSGFESTAPLFGASSSSEMVNGFSAPASFELPVTSDFDGFQSEAKQTLKHAKGTTT 60
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC
Sbjct: 61 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 120
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RLHELANKRRISVTGASKLLANILY+YRGMGLSVGTM+AGWDETGPGLYYVDSEGGRLKG
Sbjct: 121 RLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMVAGWDETGPGLYYVDSEGGRLKG 180
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
TRFSVGSGSPYAYGVLDSG L + + VYYVGPNG
Sbjct: 181 TRFSVGSGSPYAYGVLDSG-----------GLTKFYVL--------------VYYVGPNG 215
Query: 239 WKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
WKKLSGDDVGELHYHYYPV PSTVEQEM EV GA
Sbjct: 216 WKKLSGDDVGELHYHYYPVMPSTVEQEMVEVTGA 249
>gi|357125268|ref|XP_003564317.1| PREDICTED: proteasome subunit beta type-5-A-like [Brachypodium
distachyon]
Length = 277
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/276 (75%), Positives = 230/276 (83%), Gaps = 5/276 (1%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSL----PLSTDFDEFQKDTKATLKHAKGT 56
M+LD S LE+ F G+E + AA + L P DFD FQK TK + + KGT
Sbjct: 1 MRLDVSALENHH-FAAPGNEFGGGVFAADTEELAMEFPTCNDFDGFQKATKDMVNNKKGT 59
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTL+FIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQFWHRNLG
Sbjct: 60 TTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGT 119
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
KCRLHELANKRRIS+ G+SK+LANILYSYRGMGLS+GTMIAG+DETGPGLYYVDSEG RL
Sbjct: 120 KCRLHELANKRRISIAGSSKMLANILYSYRGMGLSIGTMIAGFDETGPGLYYVDSEGARL 179
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
KG RFSVGSGS YAYG+LD GYKF+MS+EEA ELARRAIYHATFRD ASGG SVY+VGP
Sbjct: 180 KGNRFSVGSGSLYAYGILDEGYKFNMSVEEAGELARRAIYHATFRDGASGGCVSVYHVGP 239
Query: 237 NGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
NGWKKLSGDDVGELHYHYYPV + VEQEMA+ A
Sbjct: 240 NGWKKLSGDDVGELHYHYYPVQAAPVEQEMADAPSA 275
>gi|212721760|ref|NP_001132821.1| uncharacterized protein LOC100194311 [Zea mays]
gi|194695490|gb|ACF81829.1| unknown [Zea mays]
gi|194704048|gb|ACF86108.1| unknown [Zea mays]
gi|195623962|gb|ACG33811.1| proteasome subunit beta type 5 precursor [Zea mays]
gi|413953155|gb|AFW85804.1| proteasome subunit beta type [Zea mays]
Length = 280
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/276 (75%), Positives = 227/276 (82%), Gaps = 4/276 (1%)
Query: 1 MKLDTSGLESTSPFF--GSGDE--LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGT 56
MKLD S LE+ +GD+ E PS LP+ DFD FQ TK +K+ KGT
Sbjct: 3 MKLDMSALETNFANLTASAGDDTYFSAEAPDVPSMVLPICDDFDGFQAATKDMVKNKKGT 62
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTLAFIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQFWHRNLG
Sbjct: 63 TTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGT 122
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
KCRLHEL+NKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYYVDSEG RL
Sbjct: 123 KCRLHELSNKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSEGARL 182
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
G RFSVGSGS YAYG+LD GY+F MS+EEAAELARRAIY ATFRDAASGG SVY+VGP
Sbjct: 183 VGNRFSVGSGSLYAYGILDDGYRFSMSVEEAAELARRAIYGATFRDAASGGCVSVYHVGP 242
Query: 237 NGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
+GW KLSGDDVGELHYHYYPV + VEQEMA+ A
Sbjct: 243 DGWTKLSGDDVGELHYHYYPVQKTPVEQEMADAPTA 278
>gi|326524101|dbj|BAJ97061.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/243 (81%), Positives = 217/243 (89%)
Query: 30 SFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI 89
+ P DFD FQK TKA + + KGTTTL+FIF +GV+VAADSRASMGGYISSQ+V+KI
Sbjct: 35 ALEFPTCDDFDGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKI 94
Query: 90 IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMG 149
IEINPYMLGTMAGGAADCQFWHRNLG+KCRLHELANKRRIS+ G+SK LANILYSYRGMG
Sbjct: 95 IEINPYMLGTMAGGAADCQFWHRNLGVKCRLHELANKRRISIAGSSKTLANILYSYRGMG 154
Query: 150 LSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAE 209
LS+GTMIAG+DETGPGLYYVDSEG RLKG+RFSVGSGS YAYG+LD GYKF+MS+EEAAE
Sbjct: 155 LSIGTMIAGFDETGPGLYYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAE 214
Query: 210 LARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEV 269
LARRAIYHATFRD ASGG SVYYVGP+GWKKLSGDDVGELHYHYYPV + VEQEMAE
Sbjct: 215 LARRAIYHATFRDGASGGCVSVYYVGPDGWKKLSGDDVGELHYHYYPVQAAPVEQEMAEA 274
Query: 270 AGA 272
A
Sbjct: 275 PSA 277
>gi|52548240|gb|AAU82107.1| 20S proteasome beta 5 subunit [Triticum aestivum]
Length = 279
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/243 (81%), Positives = 216/243 (88%)
Query: 30 SFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI 89
+ P DFD FQK TK + + KGTTTL+FIF +GV+VAADSRASMGGYISSQ+V+KI
Sbjct: 35 ALEFPTCNDFDGFQKATKEMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKI 94
Query: 90 IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMG 149
IEINPYMLGTMAGGAADCQFWHRNLG+KCRLHELANKRRIS+ G+SK LANILYSYRGMG
Sbjct: 95 IEINPYMLGTMAGGAADCQFWHRNLGVKCRLHELANKRRISIAGSSKTLANILYSYRGMG 154
Query: 150 LSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAE 209
LS+GTMIAG+DETGPGLYYVDSEG RLKG+RFSVGSGS YAYG+LD GYKF+MS+EEAAE
Sbjct: 155 LSIGTMIAGFDETGPGLYYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAE 214
Query: 210 LARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEV 269
LARRAIYHATFRD ASGG SVYYVGP+GWKKLSGDDVGELHYHYYPV + VEQEMAE
Sbjct: 215 LARRAIYHATFRDGASGGCVSVYYVGPDGWKKLSGDDVGELHYHYYPVQAAPVEQEMAEA 274
Query: 270 AGA 272
A
Sbjct: 275 PSA 277
>gi|242094726|ref|XP_002437853.1| hypothetical protein SORBIDRAFT_10g003770 [Sorghum bicolor]
gi|241916076|gb|EER89220.1| hypothetical protein SORBIDRAFT_10g003770 [Sorghum bicolor]
Length = 280
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/282 (73%), Positives = 230/282 (81%), Gaps = 16/282 (5%)
Query: 1 MKLDTSGLE----------STSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATL 50
MK+D S LE S +F +G P++ PS LP DFD FQ DTKA +
Sbjct: 3 MKVDMSALETNFANMTFPASDDTYFSAG---APDV---PSMVLPTCDDFDGFQADTKAMV 56
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTTLAFIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQFW
Sbjct: 57 KNKKGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFW 116
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
HRNLG KCRLHEL+NKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYYVD
Sbjct: 117 HRNLGNKCRLHELSNKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVD 176
Query: 171 SEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVAS 230
SEG RL G +FSVGSGS YAYGVLD GY+F+MS+EEAAELARRAIY ATFRDAASGG S
Sbjct: 177 SEGARLVGNKFSVGSGSLYAYGVLDDGYRFNMSVEEAAELARRAIYGATFRDAASGGCVS 236
Query: 231 VYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
VY+VGP+GW KLSGDDVGELHYHYYPV + VEQEM + A
Sbjct: 237 VYHVGPDGWTKLSGDDVGELHYHYYPVQKTPVEQEMTDAPTA 278
>gi|8671510|dbj|BAA96838.1| beta 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
Length = 277
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/277 (75%), Positives = 227/277 (81%), Gaps = 5/277 (1%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAA----PSFSLP-LSTDFDEFQKDTKATLKHAKG 55
MKLD S +E+ +G E L A P+ LP DFD FQK+TK LKH KG
Sbjct: 1 MKLDVSAMENNFAAHAAGREDDGGLFGAGADLPAMELPTCPADFDGFQKETKEMLKHKKG 60
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTTLAFIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQFWHRNLG
Sbjct: 61 TTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLG 120
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
IKCRLHELANKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYYVDSEG R
Sbjct: 121 IKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSEGAR 180
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
L G+RFSVGSGS YAYG+LD GY++ M +EEAAELARRAIY ATFRD ASGG SVY+VG
Sbjct: 181 LMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVYHVG 240
Query: 236 PNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
PNGW KLSGDDVGELHY YYPV + VEQEMA+ A
Sbjct: 241 PNGWTKLSGDDVGELHYKYYPVEATPVEQEMADAPAA 277
>gi|222634976|gb|EEE65108.1| hypothetical protein OsJ_20167 [Oryza sativa Japonica Group]
Length = 277
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/284 (73%), Positives = 228/284 (80%), Gaps = 19/284 (6%)
Query: 1 MKLDTSGLEST-----------SPFFGSGDELCPELSAAPSFSLP-LSTDFDEFQKDTKA 48
MKLD S +E+ FG+G +L P+ LP DFD FQK+TK
Sbjct: 1 MKLDVSAMENNFAAQAAGGEDDGGLFGAGADL-------PAMELPTCPADFDGFQKETKE 53
Query: 49 TLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 108
LKH KGTTTLAFIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQ
Sbjct: 54 MLKHKKGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQ 113
Query: 109 FWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYY 168
FWHRNLGIKCRLHELANKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYY
Sbjct: 114 FWHRNLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYY 173
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
VDSEG RL G+RFSVGSGS YAYG+LD GY++ M +EEAAELARRAIY ATFRD ASGG
Sbjct: 174 VDSEGARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGC 233
Query: 229 ASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
SVY+VGPNGW KLSGDDVGELHY YYPV + VEQEMA+ A
Sbjct: 234 VSVYHVGPNGWTKLSGDDVGELHYKYYPVEATPVEQEMADAPAA 277
>gi|115466486|ref|NP_001056842.1| Os06g0153800 [Oryza sativa Japonica Group]
gi|55297435|dbj|BAD69286.1| beta 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113594882|dbj|BAF18756.1| Os06g0153800 [Oryza sativa Japonica Group]
gi|215737492|dbj|BAG96622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737619|dbj|BAG96749.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 277
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/277 (75%), Positives = 227/277 (81%), Gaps = 5/277 (1%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAA----PSFSLP-LSTDFDEFQKDTKATLKHAKG 55
MKLD S +E+ +G E L A P+ LP DFD FQK+TK LKH KG
Sbjct: 1 MKLDVSAMENNFAAHAAGGEDDGGLFGAGADLPAMELPTCPADFDGFQKETKEMLKHKKG 60
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTTLAFIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQFWHRNLG
Sbjct: 61 TTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLG 120
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
IKCRLHELANKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYYVDSEG R
Sbjct: 121 IKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSEGAR 180
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
L G+RFSVGSGS YAYG+LD GY++ M +EEAAELARRAIY ATFRD ASGG SVY+VG
Sbjct: 181 LMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVYHVG 240
Query: 236 PNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
PNGW KLSGDDVGELHY YYPV + VEQEMA+ A
Sbjct: 241 PNGWTKLSGDDVGELHYKYYPVEATPVEQEMADAPAA 277
>gi|218197607|gb|EEC80034.1| hypothetical protein OsI_21721 [Oryza sativa Indica Group]
Length = 277
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/277 (75%), Positives = 226/277 (81%), Gaps = 5/277 (1%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAA----PSFSLP-LSTDFDEFQKDTKATLKHAKG 55
MKLD S +E+ +G E L A P+ LP DFD FQK+TK LKH KG
Sbjct: 1 MKLDVSAMENNFAAHAAGGEDDGGLFGAGADLPAMELPTCPADFDGFQKETKEMLKHKKG 60
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTTLAFIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQFWHRNLG
Sbjct: 61 TTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLG 120
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
IKCRLHELANKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYYVDSEG R
Sbjct: 121 IKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSEGAR 180
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
L G+RFSVGSGS YAYG+LD GY++ M +EEAAELARRAIY ATFRD ASGG SVY+VG
Sbjct: 181 LMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVYHVG 240
Query: 236 PNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
PNGW KLSGDDVGELHY YYPV VEQEMA+ A
Sbjct: 241 PNGWTKLSGDDVGELHYKYYPVEAIPVEQEMADAPAA 277
>gi|168014771|ref|XP_001759925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689055|gb|EDQ75429.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/248 (80%), Positives = 214/248 (86%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L AAPSF LP D D FQK +K AKGTTTLAF+FK GV+VAADSRASMG YIS
Sbjct: 21 PLLHAAPSFELPAVADLDGFQKAAVQMVKPAKGTTTLAFVFKHGVIVAADSRASMGNYIS 80
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQSVKKI+EINPY+LGTMAGGAADCQFW RNLG +CRLHELANKRRISVTGASKLLAN L
Sbjct: 81 SQSVKKILEINPYLLGTMAGGAADCQFWQRNLGTRCRLHELANKRRISVTGASKLLANTL 140
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YSYRGMGLS+GTMIAGWDETGPGLYYVDSEGGR+KGTRFSVGSGS YAYGVLD+G+ +DM
Sbjct: 141 YSYRGMGLSMGTMIAGWDETGPGLYYVDSEGGRVKGTRFSVGSGSTYAYGVLDTGFNWDM 200
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTV 262
SI+EA ELARR+IYHATFRD ASGGV SVYYVGP GWKK+SGDDVGELHY YYPV
Sbjct: 201 SIDEAVELARRSIYHATFRDGASGGVVSVYYVGPGGWKKMSGDDVGELHYSYYPVQEVPA 260
Query: 263 EQEMAEVA 270
E EM E +
Sbjct: 261 EAEMGEAS 268
>gi|255988227|gb|ACU51028.1| 20S proteasome beta5 subunit [Conocephalum conicum]
Length = 280
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/271 (73%), Positives = 227/271 (83%), Gaps = 5/271 (1%)
Query: 1 MKLDTSGLESTS---PFFGSG--DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKG 55
M+LD +GL+ + P G G D + +APSF+LP D D F+K +K G
Sbjct: 1 MRLDFAGLDPVTLRRPSSGDGGFDVAYDSIGSAPSFNLPAVADLDGFEKAAVDMVKPLHG 60
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTTLAF+FKEGV+VAADSRASMG YISSQ VKKI+EINPY+LGTMAGGAADCQFW RNLG
Sbjct: 61 TTTLAFVFKEGVIVAADSRASMGNYISSQDVKKILEINPYLLGTMAGGAADCQFWQRNLG 120
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
+CRLHEL NKRRISVTGASKLLAN LYSYRGMGLS+GTMIAGWDETGPGLYYVDSEGGR
Sbjct: 121 TRCRLHELGNKRRISVTGASKLLANTLYSYRGMGLSMGTMIAGWDETGPGLYYVDSEGGR 180
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
+KG RFSVGSGS YAYGVLD+G+++DM++EEA ELARR+IYHATFRD ASGGVASVYYVG
Sbjct: 181 VKGRRFSVGSGSTYAYGVLDTGFRWDMTVEEAVELARRSIYHATFRDGASGGVASVYYVG 240
Query: 236 PNGWKKLSGDDVGELHYHYYPVTPSTVEQEM 266
P+GWKK+SGDDVGELHY YYPV+ + EQE+
Sbjct: 241 PDGWKKMSGDDVGELHYKYYPVSDAPAEQEV 271
>gi|227937351|gb|ACP43316.1| 20S proteasome beta subunit 5 [Citrus maxima]
Length = 194
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL
Sbjct: 1 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 60
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY
Sbjct: 61 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 120
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 258
KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT
Sbjct: 121 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 180
Query: 259 PSTVEQEMAEVAGA 272
PSTVEQEMAEVAGA
Sbjct: 181 PSTVEQEMAEVAGA 194
>gi|3980264|emb|CAA09603.1| 20S proteasome beta subunit [Cicer arietinum]
Length = 238
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/271 (74%), Positives = 209/271 (77%), Gaps = 34/271 (12%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
MKLDTSGLES G+++ E A PSF LP S DFD F K+ +K AKGTTTLA
Sbjct: 1 MKLDTSGLESFPSLISHGNDVVGEFEAPPSFELPNSNDFDGFLKEAIQMVKPAKGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
FIFKEGVMVAAD CQFWHRNLGIKCRL
Sbjct: 61 FIFKEGVMVAAD----------------------------------CQFWHRNLGIKCRL 86
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR
Sbjct: 87 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 146
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGSPYAYGVLDSGYK+DMSIEEA+ELARRAIYHATFRD ASGGVASVYYVGP GWK
Sbjct: 147 FSVGSGSPYAYGVLDSGYKYDMSIEEASELARRAIYHATFRDGASGGVASVYYVGPTGWK 206
Query: 241 KLSGDDVGELHYHYYPVTPSTVEQEMAEVAG 271
KLSGDDVGELHYHY PVTPSTVEQEM E G
Sbjct: 207 KLSGDDVGELHYHYNPVTPSTVEQEMVEATG 237
>gi|215701183|dbj|BAG92607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/223 (83%), Positives = 201/223 (90%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
LKH KGTTTLAFIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQF
Sbjct: 2 LKHKKGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQF 61
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
WHRNLGIKCRLHELANKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYYV
Sbjct: 62 WHRNLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYV 121
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
DSEG RL G+RFSVGSGS YAYG+LD GY++ M +EEAAELARRAIY ATFRD ASGG
Sbjct: 122 DSEGARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCV 181
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
SVY+VGPNGW KLSGDDVGELHY YYPV + VEQEMA+ A
Sbjct: 182 SVYHVGPNGWTKLSGDDVGELHYKYYPVEATPVEQEMADAPAA 224
>gi|302781737|ref|XP_002972642.1| hypothetical protein SELMODRAFT_270977 [Selaginella moellendorffii]
gi|300159243|gb|EFJ25863.1| hypothetical protein SELMODRAFT_270977 [Selaginella moellendorffii]
Length = 277
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/270 (72%), Positives = 212/270 (78%), Gaps = 5/270 (1%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
M LD SGLE S S + SF LP D D FQK LK A GTTTLA
Sbjct: 3 MALDFSGLEPASLRQHSYSDPAAHWEPQCSFPLPKVADLDGFQKAAVDLLKPAHGTTTLA 62
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
F F+ G++VAADSRASMG YISSQSVKKI+EINPY+LGTMAGGAADCQFW RNLG +CRL
Sbjct: 63 FEFQGGIIVAADSRASMGQYISSQSVKKILEINPYLLGTMAGGAADCQFWQRNLGTRCRL 122
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISV GASKLLAN LYSYRGMGLS+GTMIAGWDETGP L+YVDSEGGR KGT
Sbjct: 123 HELANKRRISVAGASKLLANTLYSYRGMGLSMGTMIAGWDETGPALFYVDSEGGRTKGTL 182
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGS YAYG+LDSGYKF+MS+EEA EL RRAIYHATFRD ASGGVASVY++GP GWK
Sbjct: 183 FSVGSGSTYAYGILDSGYKFEMSVEEAVELGRRAIYHATFRDGASGGVASVYHIGPQGWK 242
Query: 241 KLSGDDVGELHYHYYP-----VTPSTVEQE 265
K+SGDDV ELHY YYP P VE++
Sbjct: 243 KISGDDVSELHYQYYPPESQASAPDVVEEQ 272
>gi|16588840|gb|AAL26914.1|AF323592_1 putative 20S proteasome beta subunit 5, partial [Prunus persica]
Length = 201
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/201 (92%), Positives = 192/201 (95%)
Query: 72 DSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 131
+SRASMGGYISSQSV+KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV
Sbjct: 1 NSRASMGGYISSQSVEKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 60
Query: 132 TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAY 191
TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG RFSVGSGSPYAY
Sbjct: 61 TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFSVGSGSPYAY 120
Query: 192 GVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
GVLD GY++DMS+EEAAELARRAIYHATFRD ASGGVASVY+VGPNGWKKLSGDDVGELH
Sbjct: 121 GVLDDGYRYDMSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNGWKKLSGDDVGELH 180
Query: 252 YHYYPVTPSTVEQEMAEVAGA 272
YHYYPV VEQEM EVA A
Sbjct: 181 YHYYPVVEGAVEQEMVEVAAA 201
>gi|302825012|ref|XP_002994143.1| hypothetical protein SELMODRAFT_272351 [Selaginella moellendorffii]
gi|300138019|gb|EFJ04804.1| hypothetical protein SELMODRAFT_272351 [Selaginella moellendorffii]
Length = 275
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/270 (71%), Positives = 212/270 (78%), Gaps = 5/270 (1%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
M LD SGLE S S + SF LP D D FQK LK A GTTTLA
Sbjct: 1 MALDFSGLEPASLRQHSYSDPAAHWEPQCSFPLPKVADLDGFQKAAVDLLKPAHGTTTLA 60
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
F F+ G++VAADSRASMG YISSQSVKKI+EINPY+LGTMAGGAADCQFW RNLG +CRL
Sbjct: 61 FEFQGGIIVAADSRASMGQYISSQSVKKILEINPYLLGTMAGGAADCQFWQRNLGTRCRL 120
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HELANKRRISV GASKLLAN LYSYRGMGLS+GTMIAGWDETGP L+YVDSEGGR KGT
Sbjct: 121 HELANKRRISVAGASKLLANTLYSYRGMGLSMGTMIAGWDETGPALFYVDSEGGRTKGTL 180
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGS YAYG+LDSGYK++MS+EEA EL RRAIYHATFRD ASGGVASVY++GP GWK
Sbjct: 181 FSVGSGSTYAYGILDSGYKYEMSVEEAVELGRRAIYHATFRDGASGGVASVYHIGPQGWK 240
Query: 241 KLSGDDVGELHYHYYP-----VTPSTVEQE 265
K+SGDDV ELHY YYP P VE++
Sbjct: 241 KISGDDVSELHYQYYPPESQASAPDVVEEQ 270
>gi|413953154|gb|AFW85803.1| hypothetical protein ZEAMMB73_646691 [Zea mays]
Length = 263
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/276 (69%), Positives = 212/276 (76%), Gaps = 21/276 (7%)
Query: 1 MKLDTSGLESTSPFF--GSGDE--LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGT 56
MKLD S LE+ +GD+ E PS LP+ DFD FQ TK +K+ KGT
Sbjct: 3 MKLDMSALETNFANLTASAGDDTYFSAEAPDVPSMVLPICDDFDGFQAATKDMVKNKKGT 62
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTLAFIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQFWHRNLG
Sbjct: 63 TTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGT 122
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
KCRLHEL+NKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYYVDSEG RL
Sbjct: 123 KCRLHELSNKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSEGARL 182
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
G + Y+F MS+EEAAELARRAIY ATFRDAASGG SVY+VGP
Sbjct: 183 VG-----------------NSYRFSMSVEEAAELARRAIYGATFRDAASGGCVSVYHVGP 225
Query: 237 NGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
+GW KLSGDDVGELHYHYYPV + VEQEMA+ A
Sbjct: 226 DGWTKLSGDDVGELHYHYYPVQKTPVEQEMADAPTA 261
>gi|91983309|gb|ABE68720.1| 20S proteasome beta subunit [Arachis hypogaea]
Length = 223
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/214 (85%), Positives = 193/214 (90%), Gaps = 8/214 (3%)
Query: 67 VMVAADSR--------ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
VM AA R ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC
Sbjct: 10 VMAAAGFRLADTFHTGASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 69
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG
Sbjct: 70 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 129
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
TRFSVGSGSPYAYG+LDSGY++D+S++EA EL RRAIYHATFRD ASGGV SVY+VGP G
Sbjct: 130 TRFSVGSGSPYAYGILDSGYRYDLSVDEAVELGRRAIYHATFRDGASGGVVSVYHVGPEG 189
Query: 239 WKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 272
WKK +GDDVG+LHY YYPV PSTVEQEMAE GA
Sbjct: 190 WKKWTGDDVGDLHYQYYPVVPSTVEQEMAEATGA 223
>gi|167998460|ref|XP_001751936.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697034|gb|EDQ83371.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 236
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/235 (75%), Positives = 196/235 (83%), Gaps = 3/235 (1%)
Query: 39 FDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLG 98
D FQK +K AKGTTTLAF+FK GV+VAADS ASMG ISSQSVKKI+EINPY+LG
Sbjct: 1 LDGFQKAAVQLVKPAKGTTTLAFVFKHGVIVAADSSASMGNSISSQSVKKILEINPYLLG 60
Query: 99 TMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAG 158
TMAGGAADCQFW RNLG +CRLHELANKR ISVTGASKLLAN LYSYRGMGL +GTMIAG
Sbjct: 61 TMAGGAADCQFWQRNLGTRCRLHELANKRHISVTGASKLLANTLYSYRGMGLFMGTMIAG 120
Query: 159 WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHA 218
WDETGPGLYYVDSEGGR+KGTRFSVGSGS YAYGVLD+ +K DMSI+EA ELARR+IYHA
Sbjct: 121 WDETGPGLYYVDSEGGRVKGTRFSVGSGSTYAYGVLDTVFKQDMSIDEAVELARRSIYHA 180
Query: 219 TFRDAASGGVASV---YYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVA 270
T RD ASGGV + GP+GWKK+SGDD GELH+ YYPV + E EM+E +
Sbjct: 181 TLRDGASGGVTLLKCSLLCGPSGWKKMSGDDGGELHHSYYPVQETPAEAEMSEAS 235
>gi|303283522|ref|XP_003061052.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457403|gb|EEH54702.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 286
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 173/263 (65%), Positives = 207/263 (78%), Gaps = 4/263 (1%)
Query: 1 MKLDTSGLES-TSPFFGSGDELCPELSA---APSFSLPLSTDFDEFQKDTKATLKHAKGT 56
MKLD S L++ T E E+++ A +F LP+ ++D FQ++ +K GT
Sbjct: 1 MKLDFSVLDAPTRKIDAEIAECAAEINSDVHAQNFKLPMVENYDSFQREVVDYVKPNHGT 60
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTL FIF+ GV++A DSRAS G YISSQ+VKK+IEINPY+LGTMAGGAADCQFW RNLGI
Sbjct: 61 TTLGFIFEHGVVIAVDSRASQGPYISSQTVKKVIEINPYLLGTMAGGAADCQFWQRNLGI 120
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+CRLHEL N +RISV+GASKLL+N LY YRG GLS+GTM+AGWD GPGLYYVDS+G RL
Sbjct: 121 QCRLHELENGKRISVSGASKLLSNTLYGYRGQGLSMGTMVAGWDLNGPGLYYVDSDGTRL 180
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
KG RFSVGSGS +AYGVLD GY++D+S+E+A EL RRAIYHATFRDA SGG SVY+VGP
Sbjct: 181 KGKRFSVGSGSLFAYGVLDQGYRWDLSVEDACELGRRAIYHATFRDAFSGGTVSVYHVGP 240
Query: 237 NGWKKLSGDDVGELHYHYYPVTP 259
+GW K+SG DVGELHY YYP P
Sbjct: 241 DGWTKMSGTDVGELHYEYYPADP 263
>gi|308811755|ref|XP_003083185.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3 (ISS)
[Ostreococcus tauri]
gi|116055064|emb|CAL57460.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3 (ISS)
[Ostreococcus tauri]
Length = 294
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/229 (71%), Positives = 192/229 (83%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
A +F+ P DFD FQ++ +K A GTTTL FIF+ G+++A DSRAS G YISSQ+VK
Sbjct: 36 ASNFTAPAVEDFDAFQREVINYVKPAHGTTTLGFIFEHGIVIAVDSRASQGPYISSQTVK 95
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K+IEINP++LGTMAGGAADCQFW RNLGI+CRLHEL N +RI+V ASKLLAN LYSY+G
Sbjct: 96 KVIEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRITVRAASKLLANTLYSYKG 155
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
GLS+GTMIAGWD GPGLYYVDSEG RLKG RFSVGSGS +AYGVLD GY++D+S++EA
Sbjct: 156 RGLSMGTMIAGWDLNGPGLYYVDSEGTRLKGQRFSVGSGSLFAYGVLDQGYRWDLSVKEA 215
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYP 256
EL RRAIYHATFRDA SGG SVY+VG NGW K++GDDVGELH+HYYP
Sbjct: 216 CELGRRAIYHATFRDAFSGGTVSVYHVGKNGWTKVTGDDVGELHFHYYP 264
>gi|412986310|emb|CCO14736.1| predicted protein [Bathycoccus prasinos]
Length = 311
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 166/238 (69%), Positives = 193/238 (81%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
D LC + F++P DF FQKD +K GTTTL FIF+ G+++A DSRAS G
Sbjct: 29 DVLCGINTHDQYFTIPRVEDFSRFQKDVVEHVKPQHGTTTLGFIFEHGIIIAVDSRASQG 88
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
YISSQ+VKK+IEINP++LGTMAGGAADCQFW RNLGI+CRLHEL +RI+VTGASKLL
Sbjct: 89 PYISSQTVKKVIEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELETGKRITVTGASKLL 148
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
AN LY YRG GLS+GTM+AGWD TGPGL+YVDS+G RLKG RFSVGSGS +AYGVLD G+
Sbjct: 149 ANTLYGYRGRGLSMGTMVAGWDTTGPGLFYVDSDGTRLKGKRFSVGSGSLFAYGVLDQGF 208
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYP 256
+ D+SI+EAAEL RRAIYHATFRDA SGG SVY+VGP+GW K+SG DVGELHY YYP
Sbjct: 209 RHDLSIKEAAELGRRAIYHATFRDAFSGGTVSVYHVGPDGWTKMSGTDVGELHYEYYP 266
>gi|255089791|ref|XP_002506817.1| predicted protein [Micromonas sp. RCC299]
gi|226522090|gb|ACO68075.1| predicted protein [Micromonas sp. RCC299]
Length = 291
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 165/232 (71%), Positives = 191/232 (82%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
A +F LP+ ++DEFQ++ +K GTTTL FIF+ GV++A DSRAS G YISSQ+VK
Sbjct: 35 AQNFKLPMVENYDEFQREVVDYVKPNHGTTTLGFIFEHGVVIAVDSRASQGPYISSQTVK 94
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K+IEINPY+LGTMAGGAADCQFW RNLGI+CRLHEL N +RISV GASKLLAN LY YRG
Sbjct: 95 KVIEINPYLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRISVAGASKLLANTLYGYRG 154
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
GLS+GTM+AGWD GPGLYYVDS+G RLKG RFSVGSGS +AYGVLD GY++D+S+EEA
Sbjct: 155 QGLSMGTMVAGWDLKGPGLYYVDSDGTRLKGQRFSVGSGSLFAYGVLDQGYRWDLSVEEA 214
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
EL RRAIYHATFRDA SGG SVY+V NGW K+SG DVGELH+ YYP P
Sbjct: 215 CELGRRAIYHATFRDAFSGGTISVYHVNENGWTKVSGTDVGELHFEYYPADP 266
>gi|145353826|ref|XP_001421201.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581438|gb|ABO99494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 297
Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 164/230 (71%), Positives = 191/230 (83%)
Query: 30 SFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI 89
+F P DF+ FQ++ +K GTTTLAFIF+ G++VA DSRAS G YISSQ+VKK+
Sbjct: 39 NFKAPAVEDFEGFQREVINYVKPNHGTTTLAFIFEHGIVVAVDSRASQGPYISSQTVKKV 98
Query: 90 IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMG 149
IEINP++LGTMAGGAADCQFW RNLGI+CRLHEL N +RI+V ASKLLAN LYSY+G G
Sbjct: 99 IEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRITVRAASKLLANTLYSYKGKG 158
Query: 150 LSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAE 209
LS+GTM+AGWD GPGLYYVDSEG RLKG RFSVGSGS +AYGVLD GYK+D+++EEA E
Sbjct: 159 LSMGTMVAGWDLNGPGLYYVDSEGTRLKGQRFSVGSGSLFAYGVLDQGYKWDLTVEEACE 218
Query: 210 LARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
L RRAIYHATFRDA SGG SVY+VG NGW K++GDDVGELH+ YYP TP
Sbjct: 219 LGRRAIYHATFRDAFSGGTVSVYHVGANGWTKVTGDDVGELHFSYYPATP 268
>gi|14594931|emb|CAC43326.1| putative beta5 proteasome subunit [Nicotiana tabacum]
Length = 174
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 165/174 (94%), Positives = 169/174 (97%)
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRR SV GA
Sbjct: 1 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRTSVAGA 60
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
SKLLANILYSYRGMGLSVGTMIAGWDE GPGLYYVDSEGGRLKG RFSVGSGSPYAYGVL
Sbjct: 61 SKLLANILYSYRGMGLSVGTMIAGWDEKGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVL 120
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVG 248
DSGY+FD+S+EEAAELARRAIYHATFRD ASGGVASVY+VGPNGWKKLSGDDVG
Sbjct: 121 DSGYRFDLSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNGWKKLSGDDVG 174
>gi|147742762|gb|ABQ50544.1| hypothetical protein [Brassica rapa]
Length = 218
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/256 (68%), Positives = 187/256 (73%), Gaps = 45/256 (17%)
Query: 15 FGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
FGS +++ S PSF LP +TDFD FQK+ +K AKGTTTLAFIFKEGVMVAADSR
Sbjct: 6 FGSSNDMLDGFSTVPSFDLPRTTDFDGFQKEAVQMVKPAKGTTTLAFIFKEGVMVAADSR 65
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIK
Sbjct: 66 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIK----------------- 108
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
GPGLYYVD+EGGRLKG RFSVGSGSPYAYGVL
Sbjct: 109 ----------------------------GPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVL 140
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
DSGYKFDMS+EEA+ELARR+IYHATFRD ASGGVASVY+VGPNGW KLSGDDVGELHYHY
Sbjct: 141 DSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPNGWTKLSGDDVGELHYHY 200
Query: 255 YPVTPSTVEQEMAEVA 270
YPV P+ EQ M E A
Sbjct: 201 YPVPPAIAEQVMEEAA 216
>gi|307110687|gb|EFN58923.1| hypothetical protein CHLNCDRAFT_56983 [Chlorella variabilis]
Length = 275
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 202/262 (77%), Gaps = 9/262 (3%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSA------APSFSLPLSTDFDEFQKDTKATLKHAK 54
MKLD S LE P G+G E C +A SF LP D D F+++ +K
Sbjct: 2 MKLDLSCLE---PAAGAGREPCGLEAAGVSGVAVDSFPLPAVADIDSFEREVVEYVKPNH 58
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTL FIF+ GV++A DSRAS G YISSQ+VKK+IEINP++LGTMAGGAADCQFW RNL
Sbjct: 59 GTTTLGFIFQGGVIIAVDSRASQGSYISSQTVKKVIEINPHLLGTMAGGAADCQFWERNL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
G +CRL+ELAN +RI+V GASKLLAN ++SYRGMGLS+GTM+AGWDE GPGLYYVDS+G
Sbjct: 119 GRQCRLYELANGKRITVRGASKLLANTMFSYRGMGLSMGTMVAGWDEAGPGLYYVDSDGQ 178
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R KG FSVGSGS YAYGVLD GY++D+S+EEA EL +R+IYHATFRDAASGG S Y+V
Sbjct: 179 RTKGKLFSVGSGSLYAYGVLDEGYRWDLSVEEAVELGQRSIYHATFRDAASGGTVSAYHV 238
Query: 235 GPNGWKKLSGDDVGELHYHYYP 256
GW K+ G+DVG+LH++YYP
Sbjct: 239 TQEGWTKVRGEDVGQLHFNYYP 260
>gi|384245501|gb|EIE18995.1| 20S proteasome beta subunit E, type beta 5 [Coccomyxa
subellipsoidea C-169]
Length = 276
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/261 (65%), Positives = 201/261 (77%), Gaps = 4/261 (1%)
Query: 2 KLDTSGLESTSPFFGSG---DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
KLD S L S SG +++ SA F LP D D F+ + + +K GTTT
Sbjct: 3 KLDFSALCSRPLSEKSGACVEDVASITSAVQDFPLPQVQDVDRFENEVMSYVKPNHGTTT 62
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
L FIFK GV++A DSRASMG YISSQ+VKK+IEINPY+LGTMAGGAADCQFW RNLG +C
Sbjct: 63 LGFIFKYGVIIAVDSRASMGSYISSQTVKKVIEINPYLLGTMAGGAADCQFWQRNLGQQC 122
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RL+EL N +RISV ASKLLAN+++SY+G GLS+GTM+AG+D TGPGLYYVDS+G R KG
Sbjct: 123 RLYELNNGKRISVRAASKLLANVMFSYKGYGLSMGTMVAGYDPTGPGLYYVDSDGQRTKG 182
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
FSVGSGS YAYGVLD+GYK+DM +E+A EL RR+IYHATFRDA SGG SVY+V +G
Sbjct: 183 QIFSVGSGSLYAYGVLDNGYKWDMDVEDAIELGRRSIYHATFRDAVSGGTVSVYHVTADG 242
Query: 239 WKKLSGDDVGELHYHYYPVTP 259
WKK+ GDDVGELHY YYP TP
Sbjct: 243 WKKVRGDDVGELHYEYYP-TP 262
>gi|302836892|ref|XP_002950006.1| hypothetical protein VOLCADRAFT_74437 [Volvox carteri f.
nagariensis]
gi|300264915|gb|EFJ49109.1| hypothetical protein VOLCADRAFT_74437 [Volvox carteri f.
nagariensis]
Length = 272
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 163/258 (63%), Positives = 198/258 (76%), Gaps = 5/258 (1%)
Query: 2 KLDTSGLESTSPFFGSGDELCPELS---AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
KLD LE + G G L P+L SF LP D D+F+++ +K GTTT
Sbjct: 4 KLDLGILEPNAGRKGPG--LGPDLQLDVPTASFPLPAVQDLDKFEREVVEMVKPCHGTTT 61
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
L FIF+ GV++A DSRA+MG +ISSQ+VKK+IEIN +++GTMAGGAADCQFW RNLG++C
Sbjct: 62 LGFIFQHGVIIAVDSRATMGSFISSQTVKKVIEINKHLIGTMAGGAADCQFWQRNLGMRC 121
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RL+EL N +RI+V ASKLLAN ++SYRGMGLS+GTM+AGWD TGPGLYYVDS+G R KG
Sbjct: 122 RLYELNNGKRITVCAASKLLANTMFSYRGMGLSMGTMVAGWDSTGPGLYYVDSDGQRTKG 181
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
FSVGSGS YAYGVLDSGY++D+S+EEA EL RR+IYHA FRD ASGG SVY+V +G
Sbjct: 182 QIFSVGSGSLYAYGVLDSGYRWDLSVEEAIELGRRSIYHAGFRDCASGGTVSVYHVTQDG 241
Query: 239 WKKLSGDDVGELHYHYYP 256
W K+ GDDV ELHY YYP
Sbjct: 242 WTKVRGDDVTELHYQYYP 259
>gi|159481070|ref|XP_001698605.1| 20S proteasome beta subunit E, type beta 5 [Chlamydomonas
reinhardtii]
gi|158282345|gb|EDP08098.1| 20S proteasome beta subunit E, type beta 5 [Chlamydomonas
reinhardtii]
Length = 273
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 153/230 (66%), Positives = 188/230 (81%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A+ SF LP D D+F+++ +K GTTTL FIF+ GV++A DSRA+MG YISSQ+V
Sbjct: 31 ASASFPLPAVQDVDKFEREVVEMVKPCHGTTTLGFIFQHGVIIAVDSRATMGAYISSQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN ++LGTMAGGAADCQFW RNLG++CRL+EL N +RI+V ASKLL+N+++SYR
Sbjct: 91 KKVIEINKFLLGTMAGGAADCQFWQRNLGMQCRLYELNNGKRITVRAASKLLSNVMFSYR 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTM+AGWD TGPGLYYVDS+G R KG FSVGSGS YAYGVLD+GY++DM +EE
Sbjct: 151 GMGLSMGTMVAGWDPTGPGLYYVDSDGQRTKGQIFSVGSGSLYAYGVLDAGYRWDMPVEE 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYP 256
A EL RR+IYHA FRD ASGG SVY+V +GW K+ GDD+ ELHY YYP
Sbjct: 211 AVELGRRSIYHAGFRDCASGGTVSVYHVTQDGWTKVRGDDISELHYQYYP 260
>gi|290992091|ref|XP_002678668.1| predicted protein [Naegleria gruberi]
gi|284092281|gb|EFC45924.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 149/232 (64%), Positives = 180/232 (77%), Gaps = 1/232 (0%)
Query: 25 LSAAPSFSLPLSTDFDEF-QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
L F+LP S + F + K +AKGTTTL F+F +G+++A DSRASMG YISS
Sbjct: 53 LDGQQGFALPPSLNNSGFIHQKEKLEKTYAKGTTTLGFVFNKGIVIAVDSRASMGNYISS 112
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
Q+VKK+IEINPY+LGTMAGGAADCQFW R LG++CRL+EL NKRRISV ASKLL+NI+Y
Sbjct: 113 QNVKKVIEINPYLLGTMAGGAADCQFWERYLGMQCRLYELRNKRRISVAAASKLLSNIVY 172
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
Y+ GLS+GTMIAGWD TGP L+ VD++G RLKGTRFSVGSGS YAYGVLD GY+ D++
Sbjct: 173 QYKDHGLSMGTMIAGWDHTGPNLFMVDNDGTRLKGTRFSVGSGSLYAYGVLDQGYRADLT 232
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYY 255
EEA EL RRAIYHAT RDA SGG+ +VY + +GW K+S D+ ELHY Y
Sbjct: 233 EEEACELGRRAIYHATHRDAYSGGIINVYLIRSDGWTKISSTDMNELHYGKY 284
>gi|384485679|gb|EIE77859.1| proteasome component PRE2 [Rhizopus delemar RA 99-880]
Length = 277
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 154/248 (62%), Positives = 187/248 (75%), Gaps = 15/248 (6%)
Query: 20 ELCPELSAA-----PSFSLPL---STDF-----DEFQKDTKATLKHAKGTTTLAFIFKEG 66
+LC + AA PSF +P DF DE + K ++H GTTTLAF F+ G
Sbjct: 23 QLCGKWDAAQQLAFPSFDVPAIHNPVDFLRNVTDEESPEYKIKIQH--GTTTLAFQFQGG 80
Query: 67 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 126
V+VA DSRA+MG YISSQ+VKK+IEINPY+LGTMAGGAADCQ+W R LG +CRLHEL NK
Sbjct: 81 VVVAVDSRATMGNYISSQTVKKVIEINPYLLGTMAGGAADCQYWERELGRRCRLHELRNK 140
Query: 127 RRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSG 186
RISV ASKLLAN++YSY+GMGLS+GTM+ GWD+TGP L+YVDS+G RLKG FSVGSG
Sbjct: 141 ERISVAAASKLLANMVYSYKGMGLSMGTMVTGWDKTGPNLFYVDSDGSRLKGDIFSVGSG 200
Query: 187 SPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD 246
S +AYGVLDSGY +D+S+++A EL RR+IYHAT RDA SGG ++Y+V NGW D
Sbjct: 201 STFAYGVLDSGYNYDLSVKDALELGRRSIYHATHRDAMSGGSVNLYHVTENGWDYHGNHD 260
Query: 247 VGELHYHY 254
VGELH+ Y
Sbjct: 261 VGELHWEY 268
>gi|291221879|ref|XP_002730946.1| PREDICTED: proteasome beta 5 subunit-like [Saccoglossus
kowalevskii]
Length = 277
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/245 (59%), Positives = 185/245 (75%), Gaps = 5/245 (2%)
Query: 15 FGSGDELCPELSAAPSFSLPLSTDFDEFQK-----DTKATLKHAKGTTTLAFIFKEGVMV 69
F + D + PE P F+LP D E+ K D+ ++ GTTTLAF F+ GV+V
Sbjct: 26 FEALDNVEPEFYNEPKFTLPQVADPAEYLKQFEKEDSDVKIRFHHGTTTLAFKFQHGVIV 85
Query: 70 AADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRI 129
A DSRA+ G +I+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RI
Sbjct: 86 AVDSRATAGPFIASQTVKKVIEINPYLLGTMAGGAADCSFWERVLSQQCRIYELRNKERI 145
Query: 130 SVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPY 189
SV ASKLLAN++Y+Y+GMGLS+GTMI GWD+ GPGLYYVDS+G R+ FSVGSGS Y
Sbjct: 146 SVAAASKLLANMVYNYKGMGLSMGTMICGWDKRGPGLYYVDSDGTRITNYMFSVGSGSTY 205
Query: 190 AYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGE 249
AYGVLDSGY++++S++EA +L +RAIYHAT RDA SGGV ++Y++ GW K+S +DV E
Sbjct: 206 AYGVLDSGYRYELSVQEAYDLGQRAIYHATHRDAYSGGVVNLYHMKETGWIKVSQNDVKE 265
Query: 250 LHYHY 254
LHY Y
Sbjct: 266 LHYKY 270
>gi|428169158|gb|EKX38095.1| 20S proteasome subunit beta type 5 [Guillardia theta CCMP2712]
Length = 290
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 150/234 (64%), Positives = 174/234 (74%), Gaps = 10/234 (4%)
Query: 31 FSLPLSTDFDEF---------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
F++P D+F D+ LK GTTTL F+F +G+++A DSRASMG YI
Sbjct: 43 FAMPGPNAPDDFLSGAFAPKNANDSDPALKFLHGTTTLGFVFSQGIIIAVDSRASMGSYI 102
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
SQ+VKK IEI PY+LGTMAGGAADC FW R+LG CRL+EL NK RI+ ASKLL NI
Sbjct: 103 GSQTVKKCIEITPYLLGTMAGGAADCMFWERHLGRLCRLYELRNKERITTAAASKLLHNI 162
Query: 142 LYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
+YSY+G GLS+GTMIAGWD + GP LYY DSEG R+KG +FSVGSGSPYAYGVLD GYKF
Sbjct: 163 MYSYKGYGLSMGTMIAGWDKDIGPNLYYCDSEGTRVKGQKFSVGSGSPYAYGVLDEGYKF 222
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
DMSI++A EL RRAIYHATFRDA SGG SVY+V NGW K+S DDV LH Y
Sbjct: 223 DMSIDDACELGRRAIYHATFRDAMSGGRVSVYHVHENGWTKISMDDVQLLHEKY 276
>gi|156363343|ref|XP_001626004.1| predicted protein [Nematostella vectensis]
gi|156212864|gb|EDO33904.1| predicted protein [Nematostella vectensis]
Length = 279
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/244 (61%), Positives = 180/244 (73%), Gaps = 9/244 (3%)
Query: 18 GDELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVA 70
G +L P L+ F++P S D EF K D K H GTTTLAF FK GV+VA
Sbjct: 32 GGDLVPSLAEQCRFAVPPSIDPIEFLKPFTNGESDVKIHFDH--GTTTLAFKFKHGVIVA 89
Query: 71 ADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRIS 130
DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RIS
Sbjct: 90 VDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLAKQCRIYELRNKERIS 149
Query: 131 VTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYA 190
V ASK+LAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDS+G RL FSVGSGS YA
Sbjct: 150 VAAASKILANMVYYYKGMGLSMGTMICGWDKKGPGLYYVDSDGTRLSNQMFSVGSGSTYA 209
Query: 191 YGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 250
YGV+DSGYK+DMS EEA +L R+IYHAT RDA SGGV ++Y++ GW K+S DV +L
Sbjct: 210 YGVMDSGYKYDMSPEEAYDLGVRSIYHATHRDAYSGGVVNLYHMKETGWIKVSQTDVAKL 269
Query: 251 HYHY 254
HY Y
Sbjct: 270 HYQY 273
>gi|449681407|ref|XP_002162379.2| PREDICTED: proteasome subunit beta type-5-like [Hydra
magnipapillata]
Length = 277
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/246 (61%), Positives = 182/246 (73%), Gaps = 11/246 (4%)
Query: 14 FFGSGDELCPELSAAPSFSLPLSTDFDEFQK-----DTKATLKHAKGTTTLAFIFKEGVM 68
F + D CP L+ F LP +D +F DTK H GTTTLAF FK GV+
Sbjct: 32 FTLNNDLNCPGLN----FPLPNVSDVSQFLNEYTNGDTKIQFHH--GTTTLAFKFKHGVI 85
Query: 69 VAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRR 128
VA DSRAS G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CRL++L NK R
Sbjct: 86 VAVDSRASAGSYIASQTVKKVIEINPYLLGTMAGGAADCAFWQRVLAKECRLYQLRNKER 145
Query: 129 ISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSP 188
ISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDS+G RLKG FSVGSGS
Sbjct: 146 ISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSDGSRLKGDLFSVGSGST 205
Query: 189 YAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVG 248
YAYGVLD+ +K+D+++EEA +L RAIYHAT RDA SGGV ++Y++ GW K+S DV
Sbjct: 206 YAYGVLDADHKWDLTLEEAYDLGNRAIYHATHRDAGSGGVCNLYHMQETGWIKVSQTDVT 265
Query: 249 ELHYHY 254
+LHY Y
Sbjct: 266 DLHYKY 271
>gi|326427299|gb|EGD72869.1| LMP X protein [Salpingoeca sp. ATCC 50818]
Length = 292
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/250 (60%), Positives = 184/250 (73%), Gaps = 12/250 (4%)
Query: 29 PSFSLPLSTDFDEF-------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
P FSLP + + EF D+K ++ A GTTTL F F+ GV++A DSRAS G YI
Sbjct: 46 PMFSLPRTDNPSEFLHQYSDANPDSKVKIQFAHGTTTLGFKFQHGVIIAVDSRASAGSYI 105
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+SQ+VKK+IEINPY+LGTMAGGAADC +W R L +CRL EL N RISV ASK+LANI
Sbjct: 106 ASQTVKKVIEINPYLLGTMAGGAADCSYWERVLAKECRLFELRNGERISVAAASKILANI 165
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y YRGMGLS+GTMI GWD+ GPGL+YVDS+G RL FSVGSGS YAYGVLD+GY++D
Sbjct: 166 VYHYRGMGLSMGTMICGWDKKGPGLFYVDSDGTRLTNNLFSVGSGSTYAYGVLDAGYRWD 225
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK-LSGDDVGELHYHYYPVTPS 260
+S+EEA ELARRAIYHATFRDA SGG ++Y++ GW++ L+ DVG LHY Y +
Sbjct: 226 LSVEEAHELARRAIYHATFRDAYSGGHINLYHMKETGWERILNMQDVGPLHYEY----EA 281
Query: 261 TVEQEMAEVA 270
EQ MA A
Sbjct: 282 MKEQSMATTA 291
>gi|413953156|gb|AFW85805.1| hypothetical protein ZEAMMB73_646691 [Zea mays]
Length = 203
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 163/201 (81%), Gaps = 4/201 (1%)
Query: 1 MKLDTSGLESTSPFF--GSGDE--LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGT 56
MKLD S LE+ +GD+ E PS LP+ DFD FQ TK +K+ KGT
Sbjct: 3 MKLDMSALETNFANLTASAGDDTYFSAEAPDVPSMVLPICDDFDGFQAATKDMVKNKKGT 62
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTLAFIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQFWHRNLG
Sbjct: 63 TTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGT 122
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
KCRLHEL+NKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYYVDSEG RL
Sbjct: 123 KCRLHELSNKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSEGARL 182
Query: 177 KGTRFSVGSGSPYAYGVLDSG 197
G RFSVGSGS YAYG+LD G
Sbjct: 183 VGNRFSVGSGSLYAYGILDDG 203
>gi|196003382|ref|XP_002111558.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
gi|190585457|gb|EDV25525.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
Length = 276
Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 150/242 (61%), Positives = 177/242 (73%), Gaps = 8/242 (3%)
Query: 19 DELCPELSAAPSFSLP------LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAAD 72
DEL LS SF +P +E + K H GTTTLAF FK GV+VAAD
Sbjct: 33 DELRTHLSKELSFQVPPMDPQVFLKSINERENGVKIQFLH--GTTTLAFKFKNGVIVAAD 90
Query: 73 SRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVT 132
SRASMG YI SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV
Sbjct: 91 SRASMGSYIGSQTVKKVIEINPYLLGTMAGGAADCSFWERVLAERCRVYELRNKERISVA 150
Query: 133 GASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYG 192
ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDS+G R+ FSVGSGS YAYG
Sbjct: 151 AASKLLANMVYYYKGMGLSMGTMICGWDKRGPGLYYVDSDGTRMTNYMFSVGSGSTYAYG 210
Query: 193 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+LDSG+K D+ EEA +LARRAI+HAT RDA SGG ++Y+V GW K+S DDVG L+Y
Sbjct: 211 ILDSGFKHDLEDEEAYDLARRAIFHATHRDAYSGGSVNLYHVKETGWVKISRDDVGPLYY 270
Query: 253 HY 254
Y
Sbjct: 271 QY 272
>gi|20302762|gb|AAM18885.1|AF391293_2 unknown [Branchiostoma floridae]
Length = 275
Score = 299 bits (765), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 150/248 (60%), Positives = 182/248 (73%), Gaps = 9/248 (3%)
Query: 16 GSGD----ELCPELSAAPSFSLPLSTDFDEFQK-----DTKATLKHAKGTTTLAFIFKEG 66
G GD ++ L + FS+P TD EF K + ++ GTTTLAF F+ G
Sbjct: 23 GKGDVDESDVLNNLWSLDKFSIPAVTDPAEFLKPFTTGEGNVKIEFDHGTTTLAFKFQHG 82
Query: 67 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 126
V+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK
Sbjct: 83 VIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERVLAEQCRIYELRNK 142
Query: 127 RRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSG 186
RISV ASKLLANI+Y+Y+GMGLS+GTMI GWD+ GPGLYYVDS+G RL FSVGSG
Sbjct: 143 ERISVAAASKLLANIVYNYKGMGLSMGTMIVGWDKRGPGLYYVDSDGTRLSNNMFSVGSG 202
Query: 187 SPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD 246
S YAYGVLDSGY +DM +EEA EL +RAIYHAT RDA SGGV ++Y++ GW K+S D
Sbjct: 203 STYAYGVLDSGYSWDMGVEEAYELGKRAIYHATHRDAYSGGVVNLYHMKETGWIKVSQTD 262
Query: 247 VGELHYHY 254
V +LHY Y
Sbjct: 263 VMDLHYKY 270
>gi|449018114|dbj|BAM81516.1| 20S core proteasome subunit beta 5 [Cyanidioschyzon merolae strain
10D]
Length = 299
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/271 (57%), Positives = 193/271 (71%), Gaps = 24/271 (8%)
Query: 17 SGDELCP----ELSAAP-SFSL---------PLSTDFDEFQKDTKAT--LKHAKGTTTLA 60
SG ++CP + +AAP SL ++ + +D + + +K GTTTLA
Sbjct: 16 SGSDICPSSDGDNTAAPMDLSLGRVRVPRGASIAPRLRDVLRDEQNSSLVKFLHGTTTLA 75
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
F+F++G++VA DSRASMG YI S +VKKIIEINPY+LGTMAGGAADC FW R LG++CRL
Sbjct: 76 FVFRDGIIVAVDSRASMGQYIGSGTVKKIIEINPYLLGTMAGGAADCSFWERYLGMRCRL 135
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
HEL ++ RISV ASKLLANI+Y Y+GMGLS+GTMIAGWD+TGP L+YVDS+G RL+GTR
Sbjct: 136 HELQHRERISVAAASKLLANIVYEYKGMGLSMGTMIAGWDKTGPQLFYVDSDGVRLRGTR 195
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FSVGSGS +AYGVLD Y++DM EAAEL RRAI+HAT RDA SGG +VY+V +GW
Sbjct: 196 FSVGSGSTFAYGVLDQFYRWDMDAAEAAELGRRAIFHATHRDAYSGGYINVYHVKADGWV 255
Query: 241 KLSGDDVGELHYHYY--------PVTPSTVE 263
LS DD G Y Y P T STV+
Sbjct: 256 NLSHDDSGITKYAEYMGFRAQTAPTTASTVD 286
>gi|68510416|gb|AAY98499.1| LMP X [Swiftia exserta]
Length = 268
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/239 (60%), Positives = 178/239 (74%), Gaps = 5/239 (2%)
Query: 21 LCPELSAAPSFSLPLSTDFDEFQK-----DTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
LC + + FS P + EF D ++ A GTTTLAF F+ GV+VA DSRA
Sbjct: 25 LCIDFNYENGFSFPPVANPAEFLSQCTSGDDNIKIQFAHGTTTLAFKFQHGVIVAVDSRA 84
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC +W R L +CR++EL NK RISV AS
Sbjct: 85 TAGSYIASQTVKKVIEINPYLLGTMAGGAADCSYWERVLAKQCRIYELRNKERISVAAAS 144
Query: 136 KLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD 195
KLLAN++Y YRGMGLS+GTMI GWD+ GPGLYYVDS+G RL FSVGSGS +AYGVLD
Sbjct: 145 KLLANMVYYYRGMGLSMGTMICGWDKRGPGLYYVDSDGSRLSNNIFSVGSGSTFAYGVLD 204
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGY+ D+S++EA +L RAIYHAT RDA SGGV ++Y++ GW K+S +DVG+LHY Y
Sbjct: 205 SGYRPDLSVQEAYDLGERAIYHATHRDAYSGGVVNMYHMQETGWVKVSQNDVGQLHYKY 263
>gi|313226004|emb|CBY21147.1| unnamed protein product [Oikopleura dioica]
gi|313245698|emb|CBY40350.1| unnamed protein product [Oikopleura dioica]
Length = 287
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/242 (59%), Positives = 176/242 (72%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
PE +P FS P F D +K GTT LAF FK GVMVA DSRA+ GGYI+
Sbjct: 46 PENMVSPPFSNPQLHLDQNFGDDKPVKIKFNHGTTCLAFKFKHGVMVATDSRATAGGYIA 105
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ VKK+IEINPY+LGTMAGGAADCQFW R L ++CRL+EL NK RISV ASKLLAN++
Sbjct: 106 SQEVKKVIEINPYLLGTMAGGAADCQFWERVLAMECRLYELRNKERISVAAASKLLANMV 165
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y Y+GMGLS+GTM+ GWD+ GPGLYYVD G RL+G+ FSVGSGS +AYGVLD GY +D+
Sbjct: 166 YQYKGMGLSMGTMVCGWDKKGPGLYYVDDGGQRLEGSLFSVGSGSLFAYGVLDEGYSYDI 225
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTV 262
+E A +LA R+IYHAT+RDAASGG ++Y++ GW+ DV ELH+ Y+ +
Sbjct: 226 EVEAAKDLAIRSIYHATYRDAASGGFVNLYHMKETGWEHCGWMDVKELHWKYHDEKIARA 285
Query: 263 EQ 264
+Q
Sbjct: 286 QQ 287
>gi|164658982|ref|XP_001730616.1| hypothetical protein MGL_2412 [Malassezia globosa CBS 7966]
gi|159104512|gb|EDP43402.1| hypothetical protein MGL_2412 [Malassezia globosa CBS 7966]
Length = 295
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/224 (63%), Positives = 175/224 (78%), Gaps = 2/224 (0%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
PS L TD D + D + L H GTTTLAF +K GV+VA DSRAS G YI+S SVKK
Sbjct: 37 PSRFLAQYTDVDSTRPDARIKLNH--GTTTLAFRYKGGVVVAVDSRASAGSYIASGSVKK 94
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL NK RISV ASK+L+N++YSY+GM
Sbjct: 95 VIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAASKILSNLVYSYKGM 154
Query: 149 GLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAA 208
GLS+GTMI GWD++GP +YYVDSEG R+KG FSVGSGS +AYGVLD GY +D+S EEA
Sbjct: 155 GLSMGTMICGWDKSGPAIYYVDSEGSRMKGDLFSVGSGSTFAYGVLDQGYHWDLSEEEAL 214
Query: 209 ELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+L RR+IY AT RDA SG ++Y++GPNGW+ ++ DV +LHY
Sbjct: 215 DLGRRSIYAATHRDAYSGNTINLYHMGPNGWRFIANYDVMQLHY 258
>gi|452823884|gb|EME30891.1| 20S proteasome subunit beta 5 [Galdieria sulphuraria]
Length = 275
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/276 (56%), Positives = 194/276 (70%), Gaps = 12/276 (4%)
Query: 1 MKLD----TSGLESTSPFFGSGDELCPE--LSAAPSFSLPLSTDFDEFQKDTKATLKHAK 54
MKLD T G E + D + PE L +A + LS + + K +K
Sbjct: 1 MKLDVFNPTFGFEELNRI--EEDWIVPEEELYSAIPLAPRLSNNVLN-NRPPKDLVKFHH 57
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTL+FIF EG++ A DSRASMG YI S SVKK+IEIN Y+LGTMAGGAADC FW R L
Sbjct: 58 GTTTLSFIFSEGIVAAVDSRASMGQYIGSGSVKKVIEINKYLLGTMAGGAADCTFWERYL 117
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
G++CR+ EL NK RISV ASK+L N +Y Y+GMGLS+GTMI GWD+ GP +YYVDSEG
Sbjct: 118 GMRCRIFELKNKERISVAAASKILCNTVYQYKGMGLSMGTMIMGWDKKGPHIYYVDSEGT 177
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
RLKG++FSVGSGS +A GVLD GYK++MS+EEA EL RR+IYHAT RDA SGG +VYY+
Sbjct: 178 RLKGSKFSVGSGSTHALGVLDQGYKWNMSVEEACELGRRSIYHATHRDAFSGGYINVYYI 237
Query: 235 GPNGWKKLSGDDVG-ELHYHYY--PVTPSTVEQEMA 267
GP+GWK +S +D G + HY Y T + +Q+M+
Sbjct: 238 GPDGWKFISHEDSGFDKHYQYAADKATEAQTQQQMS 273
>gi|41352687|gb|AAS01050.1| putative proteasome 20S beta5 subunit [Brassica napus]
Length = 150
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/150 (94%), Positives = 147/150 (98%)
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
ASMGGYISSQSVKKIIEINPYMLGTMAGGAAD QFWHRNLGIKCRLHELANKRRISV+GA
Sbjct: 1 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADRQFWHRNLGIKCRLHELANKRRISVSGA 60
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
SKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG RFSVGSGSPYAYGVL
Sbjct: 61 SKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVL 120
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAA 224
DSGYKFDMS+EEA+ELARR+IYHATFRD A
Sbjct: 121 DSGYKFDMSVEEASELARRSIYHATFRDGA 150
>gi|427787733|gb|JAA59318.1| Putative 20s proteasome regulatory subunit beta type [Rhipicephalus
pulchellus]
Length = 278
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/255 (58%), Positives = 187/255 (73%), Gaps = 5/255 (1%)
Query: 3 LDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKD---TKATLKHAKGTTTL 59
LD L + FGS + C A P F+ P S KD + +++ KGTTTL
Sbjct: 20 LDQRDLLAFGDAFGSNFK-CHTQLALPPFANP-SEGMAALLKDDASRQIKIRYDKGTTTL 77
Query: 60 AFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR 119
AF +K+GV+VAADSRA+ G YI SQ+VKKIIEIN YMLGTMAGGAADC +W R L +CR
Sbjct: 78 AFKYKDGVVVAADSRATGGEYIGSQTVKKIIEINKYMLGTMAGGAADCVYWERVLAERCR 137
Query: 120 LHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT 179
++EL N+ RISV ASKLLANILY+Y+GMGLS+G MI GWD+ GPGLYYVD+EG RL G+
Sbjct: 138 IYELRNRERISVAAASKLLANILYNYKGMGLSLGVMICGWDKRGPGLYYVDNEGNRLSGS 197
Query: 180 RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
+S GSGS YAYG+LD+GY +DMS E+A ELAR+AI+HATFRD+ASGG+ VY V GW
Sbjct: 198 LYSCGSGSTYAYGILDNGYSYDMSDEDAFELARKAIFHATFRDSASGGIVRVYRVKETGW 257
Query: 240 KKLSGDDVGELHYHY 254
+++S +D +L+Y Y
Sbjct: 258 ERISEEDCKDLYYKY 272
>gi|330799420|ref|XP_003287743.1| proteasome subunit beta type 5 [Dictyostelium purpureum]
gi|325082252|gb|EGC35740.1| proteasome subunit beta type 5 [Dictyostelium purpureum]
Length = 270
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/267 (55%), Positives = 192/267 (71%), Gaps = 12/267 (4%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELS--AAPSFSLPLSTDFDEFQKDTKA------TLKH 52
+ +D LE + F D L ++ P F LP +++ +F ++T A L+
Sbjct: 2 INIDFDSLEQPTLF----DSLASDVKYLDKPHFDLPPNSNPGDFLRETFAHPNAPKPLEF 57
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTLAF++ G++VA DS+++ G Y++S+SVKK+IEI P +LGTMAGGAADC FW R
Sbjct: 58 AHGTTTLAFVYSGGIVVAVDSKSTQGPYVASRSVKKVIEITPTLLGTMAGGAADCSFWER 117
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
LG +CRL+EL NK ISV ASK+LANI+YSY+G GLS+GTMI GWD+TGP LYYVD++
Sbjct: 118 ELGRRCRLYELRNKELISVAAASKILANIVYSYKGYGLSMGTMITGWDKTGPQLYYVDND 177
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G RL G RFS GSGS YAYGVLDSG+K++M+ EEA EL RRA+YHAT RD+ SGG +VY
Sbjct: 178 GTRLHGQRFSCGSGSTYAYGVLDSGFKWEMNDEEAYELGRRAVYHATHRDSYSGGAINVY 237
Query: 233 YVGPNGWKKLSGDDVGELHYHYYPVTP 259
+V NGWKK+S DD EL+ YY + P
Sbjct: 238 HVQRNGWKKISSDDCFELYKKYYNIAP 264
>gi|328766804|gb|EGF76856.1| hypothetical protein BATDEDRAFT_14510, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 267
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 167/203 (82%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K KGTTTLAF F +GV+VA DSRA+MG YI SQ+VKK+IEINPY+LGTMAGGAADC F
Sbjct: 1 IKLEKGTTTLAFKFAKGVVVAVDSRATMGSYIGSQTVKKVIEINPYLLGTMAGGAADCSF 60
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R LG + RL+EL NK RISV ASKLL+N++Y Y+GMGLS+GTMI GWD+ GPGL+YV
Sbjct: 61 WERELGRRARLYELRNKERISVAAASKLLSNMVYGYKGMGLSMGTMITGWDKQGPGLFYV 120
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
DS+G RLK FSVGSGS YAYGVLD+GY +D+S+ +A +LARR+IYHATFRDA SGG
Sbjct: 121 DSDGQRLKNHMFSVGSGSTYAYGVLDAGYDYDLSVNDAIDLARRSIYHATFRDAYSGGSV 180
Query: 230 SVYYVGPNGWKKLSGDDVGELHY 252
+VY+V +GWK +S DV +LHY
Sbjct: 181 NVYHVQQDGWKFISNTDVMDLHY 203
>gi|443685119|gb|ELT88834.1| hypothetical protein CAPTEDRAFT_150903 [Capitella teleta]
Length = 275
Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 140/235 (59%), Positives = 177/235 (75%), Gaps = 3/235 (1%)
Query: 22 CPELSAAPSFSLPLSTDFDEFQK--DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
C E P P D +F + D ++ A GTTTLAF FK GV+VA DSRA+ G
Sbjct: 37 CTETFEIPQNFNP-GEDLKQFTEGNDDNIKIRIAHGTTTLAFKFKHGVIVAVDSRATAGD 95
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
+I+SQ+VKK+IEINPY+LGTMAGGAADCQ+W R + +CR++EL NK RISV ASKLLA
Sbjct: 96 WIASQTVKKVIEINPYLLGTMAGGAADCQYWERVVARQCRIYELRNKERISVAAASKLLA 155
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI+Y+Y+GMGLS+GTMI GWD+ GPGLYYVDS+G R+ FSVGSGS YAYGVLDS Y+
Sbjct: 156 NIVYNYKGMGLSMGTMICGWDKKGPGLYYVDSDGTRMTNAMFSVGSGSTYAYGVLDSSYR 215
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+D+S+EEA L RAIYHA RDA +GGV ++Y++ +GW K+S +D+GELHY +
Sbjct: 216 WDLSVEEAYALGERAIYHAAHRDAFTGGVVNMYHMKESGWVKVSQNDIGELHYKF 270
>gi|301624547|ref|XP_002941560.1| PREDICTED: proteasome subunit beta type-5 [Xenopus (Silurana)
tropicalis]
Length = 257
Score = 292 bits (748), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 165/200 (82%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 53 GTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 112
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 113 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 172
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G+ FSVGSGS YAYGVLD GY ++M +EEA ELARR+IY AT+RDA SGGV ++Y+V
Sbjct: 173 RVSGSVFSVGSGSMYAYGVLDRGYNYEMEVEEAQELARRSIYQATYRDAYSGGVVNLYHV 232
Query: 235 GPNGWKKLSGDDVGELHYHY 254
+GW ++S DDV +LH Y
Sbjct: 233 REDGWVRVSQDDVADLHQKY 252
>gi|161611764|gb|AAI55951.1| LOC100127332 protein [Xenopus laevis]
Length = 253
Score = 292 bits (748), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 168/205 (81%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC F
Sbjct: 44 IEFLHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSF 103
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYV
Sbjct: 104 WERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYV 163
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
DSEG R+ G+ FSVGSGS YAYGVLDSGY +++ +EEA ELARR+IY AT+RDA SGGV
Sbjct: 164 DSEGNRVSGSVFSVGSGSMYAYGVLDSGYNYELEVEEAQELARRSIYQATYRDAYSGGVV 223
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHY 254
++Y+V +GW ++S DDV ELH Y
Sbjct: 224 NLYHVREDGWVRVSQDDVLELHQKY 248
>gi|410961898|ref|XP_003987515.1| PREDICTED: proteasome subunit beta type-5 [Felis catus]
Length = 263
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/232 (60%), Positives = 177/232 (76%), Gaps = 2/232 (0%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
+PS L L+ ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VK
Sbjct: 34 SPSDGLSLAAPHRGVPEEPRIEMLH--GTTTLAFKFQHGVIVAADSRATAGAYIASQTVK 91
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+G
Sbjct: 92 KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKG 151
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +E+A
Sbjct: 152 MGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQA 211
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
+LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP
Sbjct: 212 YDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSGSTP 263
>gi|444728807|gb|ELW69249.1| Proteasome subunit beta type-5 [Tupaia chinensis]
Length = 263
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 178/233 (76%), Gaps = 11/233 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWDVP---------EEPRIEMLH--GTTTLAFKFRHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +E+
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQ 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP
Sbjct: 211 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSRYTP 263
>gi|66800081|ref|XP_628966.1| proteasome subunit beta type 5 [Dictyostelium discoideum AX4]
gi|74896741|sp|Q54BC8.1|PSB5_DICDI RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|60462347|gb|EAL60569.1| proteasome subunit beta type 5 [Dictyostelium discoideum AX4]
Length = 272
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/267 (53%), Positives = 190/267 (71%), Gaps = 10/267 (3%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELS--AAPSFSLPLSTDFDEFQKDT------KATLKH 52
+ +D +E + P D L ++ P F LP + + +F ++T L+
Sbjct: 2 INIDFDNIEQSQPTLY--DTLASDVKFLNTPHFELPPNANPGDFLRETFDHPSAPKALEF 59
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTLAF++ G++V+ DS+++ G Y++S+SVKK+IEI P +LGTMAGGAADC FW R
Sbjct: 60 AHGTTTLAFVYGGGIIVSVDSKSTQGPYVASRSVKKVIEITPTLLGTMAGGAADCSFWER 119
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
LG +CRL+EL NK ISV ASK+LANI+YSY+G GLS+GTMI GWD+TGP LYYVD++
Sbjct: 120 ELGRRCRLYELRNKELISVAAASKILANIVYSYKGYGLSMGTMITGWDKTGPQLYYVDND 179
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G RL G RFS GSGS YAYGVLD+G+K+DM+ EEA EL RRA+YHAT RDA SGG +VY
Sbjct: 180 GTRLHGQRFSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAINVY 239
Query: 233 YVGPNGWKKLSGDDVGELHYHYYPVTP 259
+V +GWKK+S DD +L+ YY + P
Sbjct: 240 HVQKDGWKKISSDDCFKLYQKYYNIVP 266
>gi|1708783|emb|CAA66312.1| LMP7-like protein [Geodia cydonium]
Length = 280
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/235 (60%), Positives = 178/235 (75%), Gaps = 6/235 (2%)
Query: 26 SAAP-SFSLPLSTDFDEFQK-----DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
SA P SF++P + EF + + ++ A GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 39 SATPRSFAVPPGIEPVEFLQRFSSDEGGVKIEFAHGTTTLAFKFQHGVIVAVDSRATAGS 98
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
+I+SQ+VKK+IEINPY+LGTMAGGAADC +W R L CR++EL NK RISV ASK+L+
Sbjct: 99 WIASQTVKKVIEINPYLLGTMAGGAADCAYWERQLAFSCRVYELRNKERISVAAASKILS 158
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++Y Y+GMGLS+GTMI GWD+ GPGLYYVDS+G RL FSVGSGS YAYGVLDSGY
Sbjct: 159 NMVYRYKGMGLSMGTMICGWDKKGPGLYYVDSDGSRLTHHMFSVGSGSTYAYGVLDSGYS 218
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+D+S+EEA +L +RAIYHAT RDA SGGV ++Y++ GW K+S DV ELHY Y
Sbjct: 219 YDLSVEEARDLGKRAIYHATHRDAYSGGVVNLYHMMETGWVKVSQTDVKELHYQY 273
>gi|160333293|ref|NP_001099197.2| proteasome subunit beta type-5 [Rattus norvegicus]
gi|149063910|gb|EDM14180.1| proteasome (prosome, macropain) subunit, beta type 5, isoform CRA_a
[Rattus norvegicus]
Length = 263
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 178/233 (76%), Gaps = 11/233 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFQHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YA+GV+D GY +D+ +EE
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEE 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y P
Sbjct: 211 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYTSSIP 263
>gi|431907188|gb|ELK11254.1| Proteasome subunit beta type-5 [Pteropus alecto]
Length = 263
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 178/233 (76%), Gaps = 11/233 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEILH--GTTTLAFKFQHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +E+
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQ 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP
Sbjct: 211 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSESTP 263
>gi|30584671|gb|AAP36588.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 5
[synthetic construct]
Length = 209
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 166/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 4 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 63
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 64 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 123
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 124 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 183
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y TP
Sbjct: 184 REDGWIRVSSDNVADLHEKYSGSTP 208
>gi|558526|dbj|BAA06097.1| proteasome subunit X [Homo sapiens]
gi|30582393|gb|AAP35423.1| proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens]
Length = 208
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 166/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 4 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 63
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 64 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 123
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 124 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 183
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y TP
Sbjct: 184 REDGWIRVSSDNVADLHEKYSGSTP 208
>gi|1405323|dbj|BAA10932.1| LMPX of lamprey [Petromyzon marinus]
Length = 273
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/233 (61%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 29 PSFSLPLSTDFDEF-------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
P F++P D EF + D K +H GTTTLAF F+ GV+VA DSRA+ G YI
Sbjct: 39 PRFAMPPGEDPVEFLRPFASGESDVKIQFQH--GTTTLAFKFQHGVIVAVDSRATAGSYI 96
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+SQ+VKK+IEINPY+LGTMAGGAADC +W R L +CR++EL NK RISV ASKLLAN+
Sbjct: 97 ASQTVKKVIEINPYLLGTMAGGAADCMYWERVLAKQCRIYELRNKERISVAAASKLLANM 156
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y Y+GMGLS+GTMI GWD+ GPGLYYVD EG RL G+ F+VGSGSPYA+GVLDSGY+ D
Sbjct: 157 VYQYKGMGLSMGTMICGWDKKGPGLYYVDDEGMRLPGSMFAVGSGSPYAFGVLDSGYRED 216
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI AT RDA SGGV ++Y++ GW K+S DDV EL Y +
Sbjct: 217 LSKEEAYDLGRRAIASATHRDAYSGGVVNLYHMCQTGWIKVSQDDVSELQYKF 269
>gi|194207138|ref|XP_001494538.2| PREDICTED: proteasome subunit beta type-5-like isoform 1 [Equus
caballus]
Length = 263
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 178/233 (76%), Gaps = 11/233 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFQHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +E+
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQ 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP
Sbjct: 211 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSGSTP 263
>gi|83035093|ref|NP_001032701.1| proteasome subunit beta type-5 precursor [Bos taurus]
gi|122138604|sp|Q32KL2.1|PSB5_BOVIN RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|81673887|gb|AAI10040.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Bos taurus]
gi|296483649|tpg|DAA25764.1| TPA: proteasome subunit beta type-5 precursor [Bos taurus]
Length = 263
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/228 (61%), Positives = 176/228 (77%), Gaps = 11/228 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEILH--GTTTLAFKFRHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +EE
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEE 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A +LARRAIY AT+RDA SGG S+Y+V +GW ++S D+V +LH Y
Sbjct: 211 AYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDNVADLHDKY 258
>gi|440906310|gb|ELR56586.1| Proteasome subunit beta type-5, partial [Bos grunniens mutus]
Length = 266
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/228 (61%), Positives = 176/228 (77%), Gaps = 11/228 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 45 AAPSWGVP---------EEPRIEILH--GTTTLAFKFRHGVIVAADSRATAGAYIASQTV 93
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 94 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 153
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +EE
Sbjct: 154 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEE 213
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A +LARRAIY AT+RDA SGG S+Y+V +GW ++S D+V +LH Y
Sbjct: 214 AYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDNVADLHDKY 261
>gi|403264182|ref|XP_003924370.1| PREDICTED: proteasome subunit beta type-5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403264184|ref|XP_003924371.1| PREDICTED: proteasome subunit beta type-5 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403264186|ref|XP_003924372.1| PREDICTED: proteasome subunit beta type-5 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 263
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 149/255 (58%), Positives = 185/255 (72%), Gaps = 5/255 (1%)
Query: 8 LESTSP-FFGSGD--ELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFK 64
L T P FFG G +L +PS L L+ ++ + H GTTTLAF F+
Sbjct: 11 LPVTQPGFFGLGGRADLLDLGPGSPSDGLTLAVPGWGVPEEPGIEMLH--GTTTLAFKFR 68
Query: 65 EGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELA 124
GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL
Sbjct: 69 HGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELR 128
Query: 125 NKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVG 184
NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVG
Sbjct: 129 NKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVG 188
Query: 185 SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSG 244
SGS YAYGV+D GY +D+ +EEA +LARRAIY AT+RDA SGG ++Y+V +GW ++S
Sbjct: 189 SGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSS 248
Query: 245 DDVGELHYHYYPVTP 259
D+V +LH Y TP
Sbjct: 249 DNVADLHEKYSGSTP 263
>gi|426232754|ref|XP_004010385.1| PREDICTED: proteasome subunit beta type-5 [Ovis aries]
Length = 263
Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/228 (61%), Positives = 176/228 (77%), Gaps = 11/228 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFRHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +EE
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEE 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A +LARRAIY AT+RDA SGG S+Y+V +GW ++S D+V +LH Y
Sbjct: 211 AYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDNVADLHDKY 258
>gi|6755204|ref|NP_035316.1| proteasome subunit beta type-5 [Mus musculus]
gi|187608891|sp|O55234.3|PSB5_MOUSE RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit X; Flags: Precursor
gi|5757659|gb|AAD50536.1|AF060091_1 proteasome subunit X [Mus musculus]
gi|2897806|dbj|BAA24916.1| PSMB5 [Mus musculus]
gi|2897809|dbj|BAA24917.1| PSMB5 [Mus musculus]
gi|74228773|dbj|BAE21876.1| unnamed protein product [Mus musculus]
gi|77415527|gb|AAI06145.1| Proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
gi|148704392|gb|EDL36339.1| mCG8712, isoform CRA_b [Mus musculus]
Length = 264
Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/232 (61%), Positives = 178/232 (76%), Gaps = 11/232 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFLHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YAYGV+D GY +D+ +EE
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEE 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 258
A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y V+
Sbjct: 211 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSSVS 262
>gi|187608893|sp|P28075.3|PSB5_RAT RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit X; Flags: Precursor
Length = 263
Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 178/233 (76%), Gaps = 11/233 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFQHGVIVAADSRATAGPYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YA+GV+D GY +D+ +EE
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEE 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y P
Sbjct: 211 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYTSSIP 263
>gi|15126628|gb|AAH12246.1| Proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
Length = 264
Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/232 (61%), Positives = 178/232 (76%), Gaps = 11/232 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFLHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YAYGV+D GY +D+ +EE
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEE 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 258
A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y V+
Sbjct: 211 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSNDNVADLHDKYSSVS 262
>gi|417398038|gb|JAA46052.1| Putative 20s proteasome regulatory subunit beta type [Desmodus
rotundus]
Length = 263
Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 148/256 (57%), Positives = 188/256 (73%), Gaps = 9/256 (3%)
Query: 6 SGLESTSP-----FFGSGD--ELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
S L+S+ P FFG G +L +PS L L+ + ++ + + H GTTT
Sbjct: 5 SVLKSSLPVNRHGFFGLGGRADLLDLGPGSPSDGLNLAAPSWDASEEPRIEILH--GTTT 62
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +C
Sbjct: 63 LAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQC 122
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
R++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G
Sbjct: 123 RIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISG 182
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
FSVGSGS YAYGV+D GY +D+ +EEA +LARRAIY AT+RDA SGG ++Y+V +G
Sbjct: 183 AAFSVGSGSVYAYGVMDRGYYYDLEVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDG 242
Query: 239 WKKLSGDDVGELHYHY 254
W ++S D+V +LH Y
Sbjct: 243 WIRVSSDNVADLHDKY 258
>gi|354488029|ref|XP_003506173.1| PREDICTED: proteasome subunit beta type-5-like [Cricetulus griseus]
gi|344242609|gb|EGV98712.1| Proteasome subunit beta type-5 [Cricetulus griseus]
Length = 263
Score = 289 bits (740), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 177/228 (77%), Gaps = 11/228 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFRHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YAYGV+D GY +D+ ++E
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLEVQE 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y
Sbjct: 211 AYDLARRAIYQATYRDAYSGGSVNLYHVREDGWIRVSSDNVADLHDKY 258
>gi|219118149|ref|XP_002179855.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408908|gb|EEC48841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 283
Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 172/210 (81%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
D +K AKGTTTLAF F G++V+ DSR++MG YI+S +VKK+IEINP++LGTMAGGA
Sbjct: 64 DAGQEVKFAKGTTTLAFKFNGGIIVSVDSRSTMGYYIASGTVKKVIEINPFLLGTMAGGA 123
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADC FW RNLG++CRL+EL N RRI+V ASKLLAN++ +YRG GLS+GTMI GWDETGP
Sbjct: 124 ADCSFWERNLGMECRLYELRNGRRITVAAASKLLANVMSAYRGYGLSMGTMITGWDETGP 183
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
LYYVD++G RLKG FSVGSGS YAYGVLD+ ++ D+S+EEA +L +RAIYHAT RDAA
Sbjct: 184 QLYYVDNDGTRLKGKYFSVGSGSMYAYGVLDNHWREDLSVEEAIDLGKRAIYHATHRDAA 243
Query: 225 SGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGG+ ++Y+V +GWK + G DV ++HY +
Sbjct: 244 SGGINNLYHVTADGWKYIHGIDVNDMHYEF 273
>gi|328872141|gb|EGG20508.1| proteasome subunit beta type 5 [Dictyostelium fasciculatum]
Length = 300
Score = 289 bits (740), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 141/235 (60%), Positives = 175/235 (74%), Gaps = 6/235 (2%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F LP ++ EF + ++ A GTTTLAF+F GV+VA DS+++ G Y++S+
Sbjct: 58 FELPPNSKPGEFLDQVWDHPNAPKPIEMAHGTTTLAFVFNGGVIVAVDSKSTQGSYVASR 117
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
+VKK+IEI P +LGTMAGGAADC FW R LG +CRL+EL NK ISV ASK+LANI+YS
Sbjct: 118 TVKKVIEITPNLLGTMAGGAADCSFWERELGRRCRLYELRNKELISVAAASKILANIVYS 177
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
Y+G GLS+GTMI GWD+TGP LYYVD++G RLKG RFSVGSGS YAYGVLDSGYK D++
Sbjct: 178 YKGYGLSMGTMITGWDKTGPCLYYVDNDGTRLKGQRFSVGSGSTYAYGVLDSGYKPDLTD 237
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
+EA EL RRA+YHAT RDA SGG +VY+V GW K+S DD +L+ YY V P
Sbjct: 238 QEAQELGRRAVYHATHRDAMSGGFINVYHVKETGWVKISSDDCFKLYQKYYNVKP 292
>gi|440789731|gb|ELR11030.1| proteasome endopeptidase subunit, putative [Acanthamoeba
castellanii str. Neff]
Length = 275
Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 134/241 (55%), Positives = 177/241 (73%), Gaps = 1/241 (0%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
P+ S P S D FQ+ +K GTTTL+F+F+ G++VA DSRA+ G YI+SQSV+K
Sbjct: 35 PAVSNPASFLTDTFQETQAEPIKMLHGTTTLSFVFQGGIVVAVDSRATQGTYIASQSVQK 94
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+I INP++LGTMAGGAADC +W R LG + RL++L NK R++V ASK+L+NILY YR
Sbjct: 95 VIRINPFLLGTMAGGAADCSYWERELGRRTRLYQLRNKERMTVAAASKVLSNILYYYRNQ 154
Query: 149 GLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAA 208
GLSVG+MI GWD+ GP ++YVDS+G RLKG +FSVGSG YAYGV+D+GY+FD+++EEA
Sbjct: 155 GLSVGSMICGWDKRGPNIFYVDSDGTRLKGDKFSVGSGGTYAYGVMDAGYRFDLTVEEAC 214
Query: 209 ELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP-STVEQEMA 267
EL RRAI+HA RDA SGG +VY++ GWK +S D +L+Y Y + E+EM
Sbjct: 215 ELGRRAIFHAAHRDAYSGGTINVYHISEQGWKHISAQDSNDLYYEQYGLAAREKAEKEMN 274
Query: 268 E 268
E
Sbjct: 275 E 275
>gi|639871|dbj|BAA08204.1| proteasome subunit RCX [Rattus rattus]
Length = 208
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 166/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 4 GTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 63
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 64 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 123
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ GT FSVGSGS YA+GV+D GY +D+ +EEA +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 124 RISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHV 183
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y P
Sbjct: 184 REDGWIRVSSDNVADLHDKYTSSIP 208
>gi|21465653|pdb|1IRU|L Chain L, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465667|pdb|1IRU|Z Chain Z, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 204
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 165/204 (80%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 1 TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLA 60
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R
Sbjct: 61 RQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNR 120
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 121 ISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVR 180
Query: 236 PNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y TP
Sbjct: 181 EDGWIRVSSDNVADLHEKYSGSTP 204
>gi|301781284|ref|XP_002926051.1| PREDICTED: proteasome subunit beta type-5-like [Ailuropoda
melanoleuca]
gi|281343378|gb|EFB18962.1| hypothetical protein PANDA_015661 [Ailuropoda melanoleuca]
Length = 263
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/232 (59%), Positives = 176/232 (75%), Gaps = 2/232 (0%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
+PS L L+ ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VK
Sbjct: 34 SPSDGLSLAAPNWGVTEEPRIEMLH--GTTTLAFKFQHGVIVAADSRATAGAYIASQTVK 91
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+G
Sbjct: 92 KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKG 151
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +E+A
Sbjct: 152 MGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQA 211
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
+LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y P
Sbjct: 212 YDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDEYSGSAP 263
>gi|378792313|pdb|3UNB|K Chain K, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792327|pdb|3UNB|Y Chain Y, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792341|pdb|3UNB|MM Chain m, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792355|pdb|3UNB|1 Chain 1, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792369|pdb|3UNE|K Chain K, Mouse Constitutive 20s Proteasome
gi|378792383|pdb|3UNE|Y Chain Y, Mouse Constitutive 20s Proteasome
gi|378792397|pdb|3UNE|MM Chain m, Mouse Constitutive 20s Proteasome
gi|378792411|pdb|3UNE|1 Chain 1, Mouse Constitutive 20s Proteasome
Length = 205
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 165/203 (81%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTTLAF F GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 1 TTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLA 60
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R
Sbjct: 61 RQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNR 120
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
+ GT FSVGSGS YAYGV+D GY +D+ +EEA +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 121 ISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVR 180
Query: 236 PNGWKKLSGDDVGELHYHYYPVT 258
+GW ++S D+V +LH Y V+
Sbjct: 181 EDGWIRVSSDNVADLHDKYSSVS 203
>gi|31874085|emb|CAD97956.1| hypothetical protein [Homo sapiens]
Length = 266
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 168/210 (80%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC F
Sbjct: 57 IEMLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSF 116
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYV
Sbjct: 117 WERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYV 176
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
DSEG R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG
Sbjct: 177 DSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAV 236
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
++Y+V +GW ++S D+V +LH Y TP
Sbjct: 237 NLYHVREDGWIRVSSDNVADLHEKYSGSTP 266
>gi|327289325|ref|XP_003229375.1| PREDICTED: proteasome subunit beta type-5-like [Anolis
carolinensis]
Length = 316
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/208 (65%), Positives = 167/208 (80%), Gaps = 2/208 (0%)
Query: 44 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGG 103
+D L H GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGG
Sbjct: 99 QDVNIELLH--GTTTLAFKFQHGVIVAVDSRATAGVYIASQTVKKVIEINPYLLGTMAGG 156
Query: 104 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 163
AADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ G
Sbjct: 157 AADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRG 216
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
PGLYYVDSEG R+ GT FSVGSGS YAYGV+D GY ++S+EEA +LARRAIY AT+RDA
Sbjct: 217 PGLYYVDSEGNRISGTVFSVGSGSVYAYGVMDRGYSHNLSVEEAYDLARRAIYQATYRDA 276
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGELH 251
SGG ++Y+V +GW ++S DDV +LH
Sbjct: 277 YSGGTVNLYHVRQDGWIRVSSDDVSKLH 304
>gi|351697092|gb|EHB00011.1| Proteasome subunit beta type-5 [Heterocephalus glaber]
Length = 263
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 176/233 (75%), Gaps = 11/233 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGAP---------EEPRIEMLH--GTTTLAFKFRHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +EE
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGVAFSVGSGSVYAYGVMDRGYSYDLEVEE 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y P
Sbjct: 211 AYDLARRAIYQATYRDAYSGGSVNLYHVREDGWIRVSSDNVADLHDKYSGSVP 263
>gi|4506201|ref|NP_002788.1| proteasome subunit beta type-5 isoform 1 [Homo sapiens]
gi|197099702|ref|NP_001126063.1| proteasome subunit beta type-5 precursor [Pongo abelii]
gi|397473327|ref|XP_003808166.1| PREDICTED: proteasome subunit beta type-5 isoform 1 [Pan paniscus]
gi|397473329|ref|XP_003808167.1| PREDICTED: proteasome subunit beta type-5 isoform 2 [Pan paniscus]
gi|187608890|sp|P28074.3|PSB5_HUMAN RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit MB1; AltName: Full=Proteasome subunit X; Flags:
Precursor
gi|187608892|sp|Q5R8S2.3|PSB5_PONAB RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|1262338|emb|CAA64838.1| proteasome [Homo sapiens]
gi|35505516|gb|AAH57840.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens]
gi|55730230|emb|CAH91838.1| hypothetical protein [Pongo abelii]
gi|78395069|gb|AAI07721.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens]
gi|119586597|gb|EAW66193.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
CRA_a [Homo sapiens]
gi|119586599|gb|EAW66195.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
CRA_a [Homo sapiens]
gi|189053214|dbj|BAG34836.1| unnamed protein product [Homo sapiens]
gi|261861254|dbj|BAI47149.1| proteasome (prosome, macropain) subunit, beta type, 5 [synthetic
construct]
gi|312153006|gb|ADQ33015.1| proteasome (prosome, macropain) subunit, beta type, 5 [synthetic
construct]
gi|410262442|gb|JAA19187.1| proteasome (prosome, macropain) subunit, beta type, 5 [Pan
troglodytes]
gi|410295900|gb|JAA26550.1| proteasome (prosome, macropain) subunit, beta type, 5 [Pan
troglodytes]
gi|410352251|gb|JAA42729.1| proteasome (prosome, macropain) subunit, beta type, 5 [Pan
troglodytes]
Length = 263
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 166/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 179 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 238
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y TP
Sbjct: 239 REDGWIRVSSDNVADLHEKYSGSTP 263
>gi|12845889|dbj|BAB26942.1| unnamed protein product [Mus musculus]
Length = 264
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/232 (60%), Positives = 178/232 (76%), Gaps = 11/232 (4%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFLHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAA+C FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAANCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YAYGV+D GY +D+ +EE
Sbjct: 151 GMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEE 210
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 258
A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y V+
Sbjct: 211 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSSVS 262
>gi|332223022|ref|XP_003260670.1| PREDICTED: proteasome subunit beta type-5 isoform 1 [Nomascus
leucogenys]
gi|441667150|ref|XP_004091952.1| PREDICTED: proteasome subunit beta type-5 [Nomascus leucogenys]
Length = 263
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 166/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 179 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 238
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y TP
Sbjct: 239 REDGWIRVSSDNVADLHEKYSGSTP 263
>gi|390468855|ref|XP_002753673.2| PREDICTED: proteasome subunit beta type-5 [Callithrix jacchus]
Length = 263
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/248 (58%), Positives = 181/248 (72%), Gaps = 4/248 (1%)
Query: 14 FFGSGD--ELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAA 71
FFG G +L +PS L L+ ++ + H GTTTLAF F+ GV+VAA
Sbjct: 18 FFGLGGRADLLDLGPGSPSDGLTLAMPGWSVPEEPGIEMLH--GTTTLAFKFRHGVIVAA 75
Query: 72 DSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 131
DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV
Sbjct: 76 DSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISV 135
Query: 132 TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAY 191
ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAY
Sbjct: 136 AAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 192 GVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
GV+D GY +D+ +EEA +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH
Sbjct: 196 GVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 252 YHYYPVTP 259
Y P
Sbjct: 256 EKYSGSAP 263
>gi|291403557|ref|XP_002718121.1| PREDICTED: proteasome beta 5 subunit [Oryctolagus cuniculus]
Length = 263
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/248 (58%), Positives = 182/248 (73%), Gaps = 4/248 (1%)
Query: 14 FFGSG--DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAA 71
FFG G +L +PS L L+ ++ + H GTTTLAF F+ GV+VAA
Sbjct: 18 FFGLGGRTDLLDLGPGSPSDGLSLTAPGWGVPEEPGIEMLH--GTTTLAFKFRHGVIVAA 75
Query: 72 DSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 131
DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV
Sbjct: 76 DSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISV 135
Query: 132 TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAY 191
ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAY
Sbjct: 136 AAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 192 GVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
GV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 252 YHYYPVTP 259
Y TP
Sbjct: 256 DKYSGSTP 263
>gi|335292522|ref|XP_001924480.2| PREDICTED: proteasome subunit beta type-5 [Sus scrofa]
Length = 275
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/232 (60%), Positives = 176/232 (75%), Gaps = 11/232 (4%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
APS+ +P ++ + + H GTTTLAF F GV+VAADSRA+ G YI+SQ+VK
Sbjct: 55 APSWGVP---------EEPRIEMLH--GTTTLAFKFLHGVIVAADSRATAGAYIASQTVK 103
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+G
Sbjct: 104 KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKG 163
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +E+A
Sbjct: 164 MGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQA 223
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
+LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP
Sbjct: 224 YDLARRAIYQATYRDAYSGGSVNLYHVREDGWIRVSSDNVADLHDKYSESTP 275
>gi|386780738|ref|NP_001247774.1| proteasome subunit beta type-5 [Macaca mulatta]
gi|402875682|ref|XP_003901626.1| PREDICTED: proteasome subunit beta type-5 [Papio anubis]
gi|355693139|gb|EHH27742.1| hypothetical protein EGK_18013 [Macaca mulatta]
gi|355778436|gb|EHH63472.1| hypothetical protein EGM_16445 [Macaca fascicularis]
gi|380814832|gb|AFE79290.1| proteasome subunit beta type-5 isoform 1 [Macaca mulatta]
gi|383420111|gb|AFH33269.1| proteasome subunit beta type-5 isoform 1 [Macaca mulatta]
gi|384948344|gb|AFI37777.1| proteasome subunit beta type-5 isoform 1 [Macaca mulatta]
Length = 263
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/248 (58%), Positives = 182/248 (73%), Gaps = 4/248 (1%)
Query: 14 FFGSGD--ELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAA 71
FFG G +L +PS L L+ ++ + H GTTTLAF F+ GV+VAA
Sbjct: 18 FFGLGGRADLLDIGPGSPSDGLSLAAPGWGVPEEPGIEMLH--GTTTLAFKFRHGVIVAA 75
Query: 72 DSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 131
DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV
Sbjct: 76 DSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISV 135
Query: 132 TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAY 191
ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAY
Sbjct: 136 AAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 192 GVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
GV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 252 YHYYPVTP 259
Y TP
Sbjct: 256 EKYSGSTP 263
>gi|344298706|ref|XP_003421032.1| PREDICTED: proteasome subunit beta type-5-like [Loxodonta africana]
Length = 263
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 165/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGGV ++Y+V
Sbjct: 179 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGVVNLYHV 238
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y P
Sbjct: 239 REDGWIRVSSDNVADLHDKYSSPAP 263
>gi|359320183|ref|XP_003639276.1| PREDICTED: proteasome subunit beta type-5-like [Canis lupus
familiaris]
Length = 263
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 166/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 179 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 238
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y TP
Sbjct: 239 REDGWIRVSSDNVADLHDKYSGSTP 263
>gi|198438343|ref|XP_002132107.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
type, 5 [Ciona intestinalis]
Length = 270
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 180/247 (72%), Gaps = 3/247 (1%)
Query: 8 LESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGV 67
L S F + + C + AP + LS + D+ +K GTTTLAF F+ GV
Sbjct: 22 LPSNEEVFNAEAQDCFSIPTAPQAASYLS---HLSKPDSDVHIKFNHGTTTLAFKFQHGV 78
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK
Sbjct: 79 VVATDSRATAGDYIASQTVKKVIEINPYLLGTMAGGAADCSFWERVLAKQCRVYELRNKE 138
Query: 128 RISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGS 187
RISV ASK+LAN++Y+Y+GMGLS+GTMI GWD+ GPGLYYVDS+G RL G+ F+VGSG+
Sbjct: 139 RISVAAASKVLANMVYNYKGMGLSMGTMICGWDKRGPGLYYVDSDGQRLNGSMFAVGSGA 198
Query: 188 PYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDV 247
YAYGV+D+GY DM +E+A L +RAIYHAT RDA SGG ++Y++ +GW+ +S DV
Sbjct: 199 TYAYGVMDAGYSNDMCVEDALALGKRAIYHATHRDAYSGGFVNLYHMKESGWEHISWTDV 258
Query: 248 GELHYHY 254
+LHY Y
Sbjct: 259 KDLHYAY 265
>gi|395859279|ref|XP_003801967.1| PREDICTED: proteasome subunit beta type-5 [Otolemur garnettii]
Length = 263
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/232 (59%), Positives = 175/232 (75%), Gaps = 11/232 (4%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
APS+ +P + ++ GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VK
Sbjct: 43 APSWGVP-----------EEPGIEMLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVK 91
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+G
Sbjct: 92 KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKG 151
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY + + +E+A
Sbjct: 152 MGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYHLEVEQA 211
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
+LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V ELH Y +TP
Sbjct: 212 YDLARRAIYQATYRDAYSGGSVNLYHVREDGWIRVSSDNVAELHDKYRGLTP 263
>gi|299116096|emb|CBN74512.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 286
Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 165/211 (78%)
Query: 42 FQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMA 101
+ D +K AKGTTTLAF F+ G++V+ DSR++MG YI+S +VKK+IEINPY+LGTMA
Sbjct: 55 YGTDHAQDIKFAKGTTTLAFKFQGGIIVSVDSRSTMGPYIASGTVKKVIEINPYLLGTMA 114
Query: 102 GGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 161
GGAADC FW RNLGI+CR++EL NK RISV ASKLL+N + YRG GLS+GTM+AGWD+
Sbjct: 115 GGAADCSFWERNLGIQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDK 174
Query: 162 TGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFR 221
TGP LYY D +G RL G FSVGSGS YAYGVLD+ YK+DM+ EEA EL +RAIYHAT R
Sbjct: 175 TGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHR 234
Query: 222 DAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DA SG + +VY V P GW K+ DV ++HY
Sbjct: 235 DAYSGSINNVYIVKPTGWVKVHAGDVNDMHY 265
>gi|395503044|ref|XP_003755883.1| PREDICTED: proteasome subunit beta type-5 [Sarcophilus harrisii]
Length = 263
Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/256 (58%), Positives = 184/256 (71%), Gaps = 9/256 (3%)
Query: 6 SGLESTSP-----FFGSG--DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTT 58
S LES P FFG G +L AP L L+ + L H GTTT
Sbjct: 5 SVLESPLPVNGVGFFGLGGRSDLLDLGPGAPGDGLSLAAPSWGAPDEPGIELLH--GTTT 62
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +C
Sbjct: 63 LAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQC 122
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
R++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G
Sbjct: 123 RIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISG 182
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
FSVGSGS YAYGV+D GY FD+++EEA +LARRAIY AT+RDA SGGV ++Y+V +G
Sbjct: 183 VTFSVGSGSVYAYGVMDRGYSFDLTVEEAYDLARRAIYQATYRDAYSGGVVNLYHVREDG 242
Query: 239 WKKLSGDDVGELHYHY 254
W ++S D+V +L+ Y
Sbjct: 243 WIRVSSDNVADLNDKY 258
>gi|348577545|ref|XP_003474544.1| PREDICTED: proteasome subunit beta type-5-like [Cavia porcellus]
Length = 263
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 165/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY +D+ +EEA +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 179 RISGAAFSVGSGSVYAYGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGSVNLYHV 238
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y P
Sbjct: 239 REDGWIRVSSDNVADLHDKYSGSVP 263
>gi|224001200|ref|XP_002290272.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
CCMP1335]
gi|220973694|gb|EED92024.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
CCMP1335]
Length = 276
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/253 (56%), Positives = 181/253 (71%), Gaps = 6/253 (2%)
Query: 2 KLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAF 61
K D S E GSG +CP PS L F+ + +K AKGTTTLAF
Sbjct: 19 KFDRSSDERRGRAVGSG-AICP-----PSLMLGEPGQFEVPNVADVSGVKFAKGTTTLAF 72
Query: 62 IFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLH 121
F G++V+ DSR++MG YI+S +VKK+IEINP++LGTMAGGAADC FW RNLG++CRL+
Sbjct: 73 KFNGGIIVSVDSRSTMGAYIASGTVKKVIEINPFLLGTMAGGAADCSFWERNLGMQCRLY 132
Query: 122 ELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRF 181
EL NK+RI+V ASKLLAN + SYRG GLS+GTMI GWDETGP LYYVD +G RL G F
Sbjct: 133 ELRNKKRITVASASKLLANTMSSYRGYGLSMGTMITGWDETGPQLYYVDDDGTRLHGRYF 192
Query: 182 SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
SVGSGS YAYGVLD+ Y+ D+++EEA +L +RAIYHA RDA SG + ++Y+V +GW K
Sbjct: 193 SVGSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSGSINNLYHVTKDGWVK 252
Query: 242 LSGDDVGELHYHY 254
+ DV ++HY +
Sbjct: 253 IHAIDVNDMHYEF 265
>gi|426376387|ref|XP_004054982.1| PREDICTED: proteasome subunit beta type-5 isoform 3 [Gorilla
gorilla gorilla]
Length = 268
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 165/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 64 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 123
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 124 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 183
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 184 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 243
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y P
Sbjct: 244 REDGWIRVSSDNVADLHEKYSGSAP 268
>gi|786582|gb|AAB33092.1| proteasome subunit MB1 [Homo sapiens]
Length = 215
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 165/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGA DC FW R L
Sbjct: 11 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAGDCSFWERLL 70
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+G+MI GWD+ GPGLYYVDSEG
Sbjct: 71 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGSMICGWDKRGPGLYYVDSEGN 130
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 131 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 190
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y TP
Sbjct: 191 REDGWIRVSSDNVADLHEKYSGSTP 215
>gi|340380909|ref|XP_003388964.1| PREDICTED: proteasome subunit beta type-5-like [Amphimedon
queenslandica]
Length = 280
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 170/230 (73%), Gaps = 5/230 (2%)
Query: 30 SFSLPLSTDFDEF-----QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
SF++P D F + +K GTTTLAF F+ GV+VA DSRA+ G YI+SQ
Sbjct: 37 SFTVPPGIDPHHFVSPFMSDSSDCKIKFNHGTTTLAFKFQHGVIVAVDSRATAGSYIASQ 96
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
+VKK+IEINPY+LGTMAGGAADC +W R L +CR++EL NK RISV ASKLLAN++
Sbjct: 97 TVKKVIEINPYLLGTMAGGAADCAYWERQLSFECRIYELRNKERISVAAASKLLANMVSY 156
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
Y+G GLS+GTMI GWD+ GPG+YYVD++G R FSVGSGS YAYGV+DS YK+ MSI
Sbjct: 157 YKGYGLSMGTMICGWDKKGPGIYYVDTDGNRFTNNIFSVGSGSTYAYGVIDSTYKWSMSI 216
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL +RAIYHAT+RD+ SGGV ++Y+V +GW K+S DV LHY Y
Sbjct: 217 EEARELGKRAIYHATYRDSYSGGVVNLYHVQEDGWTKVSQTDVKSLHYQY 266
>gi|426376383|ref|XP_004054980.1| PREDICTED: proteasome subunit beta type-5 isoform 1 [Gorilla
gorilla gorilla]
gi|426376385|ref|XP_004054981.1| PREDICTED: proteasome subunit beta type-5 isoform 2 [Gorilla
gorilla gorilla]
gi|426376389|ref|XP_004054983.1| PREDICTED: proteasome subunit beta type-5 isoform 4 [Gorilla
gorilla gorilla]
gi|426376391|ref|XP_004054984.1| PREDICTED: proteasome subunit beta type-5 isoform 5 [Gorilla
gorilla gorilla]
Length = 263
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 165/205 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V
Sbjct: 179 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 238
Query: 235 GPNGWKKLSGDDVGELHYHYYPVTP 259
+GW ++S D+V +LH Y P
Sbjct: 239 REDGWIRVSSDNVADLHEKYSGSAP 263
>gi|169146058|emb|CAQ14651.1| proteasome (prosome, macropain) subunit, beta type, 5 [Danio rerio]
Length = 269
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 140/248 (56%), Positives = 184/248 (74%), Gaps = 10/248 (4%)
Query: 7 GLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEG 66
GL T+ FG+ L +P+F++ + DE ++ ++ GTTTLAF F+ G
Sbjct: 27 GLNQTNFGFGAA------LGDSPNFAVKTLGEDDEPER----KIEFLHGTTTLAFKFQHG 76
Query: 67 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 126
V+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK
Sbjct: 77 VIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNK 136
Query: 127 RRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSG 186
RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+ GPGLYYVDSEG R+ G F+VGSG
Sbjct: 137 ERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGDLFAVGSG 196
Query: 187 SPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD 246
S YAYGV+DSG ++D++I+EA +L RRAIY AT+RDA SGG ++Y V GW+++S +D
Sbjct: 197 SMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNLYRVHSEGWERVSQED 256
Query: 247 VGELHYHY 254
V +LH Y
Sbjct: 257 VLQLHQKY 264
>gi|5833459|gb|AAD53518.1|AF155578_1 proteasome subunit beta 5 [Danio rerio]
Length = 255
Score = 286 bits (731), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 140/248 (56%), Positives = 184/248 (74%), Gaps = 10/248 (4%)
Query: 7 GLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEG 66
GL T+ FG+ L +P+F++ + DE ++ ++ GTTTLAF F+ G
Sbjct: 13 GLNQTNLGFGAA------LGDSPNFAVKTLGEDDEPER----KIEFLHGTTTLAFKFQHG 62
Query: 67 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 126
V+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK
Sbjct: 63 VIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNK 122
Query: 127 RRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSG 186
RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+ GPGLYYVDSEG R+ G F+VGSG
Sbjct: 123 ERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGDLFAVGSG 182
Query: 187 SPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD 246
S YAYGV+DSG ++D++I+EA +L RRAIY AT+RDA SGG ++Y V GW+++S +D
Sbjct: 183 SMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNLYRVHSEGWERVSQED 242
Query: 247 VGELHYHY 254
V +LH Y
Sbjct: 243 VLQLHQKY 250
>gi|157423071|gb|AAI53590.1| Psmb5 protein [Danio rerio]
Length = 269
Score = 286 bits (731), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 140/248 (56%), Positives = 184/248 (74%), Gaps = 10/248 (4%)
Query: 7 GLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEG 66
GL T+ FG+ L +P+F++ + DE ++ ++ GTTTLAF F+ G
Sbjct: 27 GLNHTNLGFGAA------LGDSPNFAVKTLGEDDEPER----KIEFLHGTTTLAFKFQHG 76
Query: 67 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 126
V+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK
Sbjct: 77 VIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNK 136
Query: 127 RRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSG 186
RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+ GPGLYYVDSEG R+ G F+VGSG
Sbjct: 137 ERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGDLFAVGSG 196
Query: 187 SPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD 246
S YAYGV+DSG ++D++I+EA +L RRAIY AT+RDA SGG ++Y V GW+++S +D
Sbjct: 197 SMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNLYRVHSEGWERVSQED 256
Query: 247 VGELHYHY 254
V +LH Y
Sbjct: 257 VLQLHQKY 264
>gi|50878269|ref|NP_571226.1| proteasome subunit beta type-5 [Danio rerio]
gi|48734690|gb|AAH71478.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Danio rerio]
Length = 269
Score = 286 bits (731), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 140/248 (56%), Positives = 184/248 (74%), Gaps = 10/248 (4%)
Query: 7 GLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEG 66
GL T+ FG+ L +P+F++ + DE ++ ++ GTTTLAF F+ G
Sbjct: 27 GLNQTNLGFGAA------LGDSPNFAVKTLGEDDEPER----KIEFLHGTTTLAFKFQHG 76
Query: 67 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 126
V+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK
Sbjct: 77 VIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNK 136
Query: 127 RRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSG 186
RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+ GPGLYYVDSEG R+ G F+VGSG
Sbjct: 137 ERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGGLFAVGSG 196
Query: 187 SPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD 246
S YAYGV+DSG ++D++I+EA +L RRAIY AT+RDA SGG ++Y V GW+++S +D
Sbjct: 197 SMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNLYRVHSEGWERVSQED 256
Query: 247 VGELHYHY 254
V +LH Y
Sbjct: 257 VLQLHQKY 264
>gi|355714024|gb|AES04864.1| proteasome subunit, beta type, 5 [Mustela putorius furo]
Length = 247
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 140/232 (60%), Positives = 175/232 (75%), Gaps = 2/232 (0%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
+PS L L+ ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VK
Sbjct: 18 SPSDGLTLAAPNWGVAEEPRIEMLH--GTTTLAFKFQHGVIVAADSRATAGAYIASQTVK 75
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+G
Sbjct: 76 KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKG 135
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ E+A
Sbjct: 136 MGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEAEQA 195
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
+LARRAIY AT+RDA SGG ++Y+V +GW ++S D V +LH Y TP
Sbjct: 196 YDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDSVADLHDKYSGSTP 247
>gi|346471555|gb|AEO35622.1| hypothetical protein [Amblyomma maculatum]
Length = 278
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 149/256 (58%), Positives = 183/256 (71%), Gaps = 7/256 (2%)
Query: 3 LDTSGLESTSPFFGSGDELCPELSAAPSFSLP----LSTDFDEFQKDTKATLKHAKGTTT 58
LD L + S FGS + C A P FS P + DE K K + + KGTTT
Sbjct: 20 LDRQYLLAFSDVFGSNFK-CHTQLALPPFSNPQEGMAALLKDESGKQIK--IHYDKGTTT 76
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAF ++ GV+VAADSRA+ G YI SQ+VKKII IN Y+LGTMAGGAADC +W R L +C
Sbjct: 77 LAFKYRGGVIVAADSRATGGEYIGSQTVKKIIVINKYLLGTMAGGAADCVYWQRVLAERC 136
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
R++EL N+ RISV ASKLLANILY+Y+GMGLS+G MI GWD+ GPGLYYVD+EG RL G
Sbjct: 137 RIYELRNRERISVAAASKLLANILYNYKGMGLSLGVMICGWDKRGPGLYYVDNEGNRLSG 196
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
+S GSGS YAYGVLD+GY +D+S EEA EL R+AI+HATFRD+ASGG+ VY V G
Sbjct: 197 NLYSCGSGSTYAYGVLDNGYSYDLSDEEAFELGRKAIFHATFRDSASGGIVRVYRVKETG 256
Query: 239 WKKLSGDDVGELHYHY 254
W+ +S +D +L+Y Y
Sbjct: 257 WECISEEDCKDLYYKY 272
>gi|308321636|gb|ADO27969.1| proteasome subunit beta type-5 [Ictalurus furcatus]
Length = 266
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 133/200 (66%), Positives = 163/200 (81%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 62 GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 121
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+ GPGLYYVDSEG
Sbjct: 122 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGN 181
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G F+VGSGS YAYGVLDSG++ D++IEEA +L RRAIY ATFRDA SGG ++Y V
Sbjct: 182 RVCGDMFAVGSGSMYAYGVLDSGHRTDLTIEEACDLGRRAIYQATFRDAYSGGQVNLYRV 241
Query: 235 GPNGWKKLSGDDVGELHYHY 254
GW+++S DDV LH+ +
Sbjct: 242 HSEGWERVSQDDVLALHHQF 261
>gi|126278093|ref|XP_001379940.1| PREDICTED: proteasome subunit beta type-5-like [Monodelphis
domestica]
Length = 263
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 165/200 (82%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYGV+D GY FD+S+E+A +LARRAIY AT+RDA SGGV ++Y+V
Sbjct: 179 RISGVTFSVGSGSVYAYGVMDRGYSFDLSVEDAYDLARRAIYQATYRDAYSGGVVNLYHV 238
Query: 235 GPNGWKKLSGDDVGELHYHY 254
+GW ++S D+V +L+ Y
Sbjct: 239 REDGWIRVSSDNVADLNDKY 258
>gi|1708781|emb|CAA66313.1| LMP7-like protein [Botryllus schlosseri]
Length = 257
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 167/203 (82%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC F
Sbjct: 51 IKFNHGTTTLAFKFQHGVVVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCMF 110
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R L +CR++EL NK RISV ASK+LAN++Y+Y+GMGLS+GTMI GWD+ GPGL+YV
Sbjct: 111 WERVLAKQCRIYELRNKERISVAAASKILANMVYNYKGMGLSMGTMICGWDKHGPGLFYV 170
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
DS+G RLKG FSVGSGS YAYGV+DSGY++D+S+ EA +L +R+IYHAT RDA SGGV
Sbjct: 171 DSDGQRLKGNMFSVGSGSTYAYGVMDSGYRYDLSVAEALDLGKRSIYHATHRDAYSGGVV 230
Query: 230 SVYYVGPNGWKKLSGDDVGELHY 252
++Y++ GW+ +S DV ++HY
Sbjct: 231 NLYHMKETGWEFISQTDVLDIHY 253
>gi|348539958|ref|XP_003457456.1| PREDICTED: proteasome subunit beta type-5-like [Oreochromis
niloticus]
Length = 271
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/227 (60%), Positives = 173/227 (76%), Gaps = 5/227 (2%)
Query: 30 SFSL--PLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
SFS+ PL D+ + ++ GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VK
Sbjct: 44 SFSVKNPLCVGDDD---GVERKIEFLHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVK 100
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+G
Sbjct: 101 KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKG 160
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGLS+GTM+ GWD+ GPGLYYVDSEG R+ G F+VGSGS YAYGV+DSG + D+++EEA
Sbjct: 161 MGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGDLFAVGSGSMYAYGVMDSGVRHDLTVEEA 220
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EL RRAIY AT+RDA SGG ++Y+V GW ++S DDV LH+ Y
Sbjct: 221 CELGRRAIYQATYRDAYSGGQVNLYHVHSEGWTRISQDDVLVLHHQY 267
>gi|71021599|ref|XP_761030.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
gi|46100884|gb|EAK86117.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
Length = 451
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 171/224 (76%), Gaps = 2/224 (0%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
P+ L TD D + A +K A GTTTLAF F+ G++V DSRA+ G YI+S +VKK
Sbjct: 3 PATFLSQYTDVDS--SNPAAKIKLAHGTTTLAFRFRGGIIVCVDSRATAGSYIASGTVKK 60
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL NK RISV ASK L+N++YSY+GM
Sbjct: 61 VIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAASKYLSNLVYSYKGM 120
Query: 149 GLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAA 208
GLS+GTMI GWD+TGP L+YVDS+G RLKG FSVGSGS +AYGVLD GYK+D+S EEA
Sbjct: 121 GLSMGTMICGWDKTGPALFYVDSDGNRLKGDVFSVGSGSTFAYGVLDQGYKWDLSDEEAQ 180
Query: 209 ELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EL RR+IY A RDA SG ++Y+V NGW+ ++ DV +LHY
Sbjct: 181 ELGRRSIYAAAHRDAYSGNTVNLYHVRENGWEFIANYDVSKLHY 224
>gi|388857139|emb|CCF49354.1| probable PRE2-20S core proteasome subunit (beta5) [Ustilago hordei]
Length = 325
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/237 (60%), Positives = 175/237 (73%), Gaps = 8/237 (3%)
Query: 24 ELSAAP-SFSLP-------LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
+L AP F LP LS D + A +K A GTTTLAF FK G++V DSRA
Sbjct: 31 QLMGAPGQFDLPNMDPATFLSQYTDVDSSNPAAKIKLAHGTTTLAFRFKGGIIVCVDSRA 90
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G YI+S +VKK+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL NK RISV AS
Sbjct: 91 TAGSYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAAS 150
Query: 136 KLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD 195
K L+N++YSY+GMGLS+GTMI GWD+TGP L+YVDS+G RLKG FSVGSGS +AYGVLD
Sbjct: 151 KYLSNLVYSYKGMGLSMGTMICGWDKTGPALFYVDSDGTRLKGDVFSVGSGSTFAYGVLD 210
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
GYK+D+S EEA EL RR+IY A RDA SG ++Y+V NGW+ ++ DV +LHY
Sbjct: 211 QGYKWDLSDEEAQELGRRSIYAAAHRDAYSGNTVNLYHVRENGWEFIANYDVSKLHY 267
>gi|47228090|emb|CAF97719.1| unnamed protein product [Tetraodon nigroviridis]
Length = 268
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 137/215 (63%), Positives = 166/215 (77%), Gaps = 2/215 (0%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
DE + K H GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGT
Sbjct: 55 DEDGVERKIEFLH--GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGT 112
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
MAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTM+ GW
Sbjct: 113 MAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGW 172
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GPGLYYVDSEG R+ G F+VGSGS YAYGV+DSG + D+S+EEA EL RRAIY AT
Sbjct: 173 DKRGPGLYYVDSEGNRVCGDLFAVGSGSMYAYGVMDSGLRHDLSVEEACELGRRAIYQAT 232
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+RDA SGG ++Y+V GW ++S DDV LH Y
Sbjct: 233 YRDAYSGGQVNLYHVHSEGWTRVSQDDVLMLHQRY 267
>gi|392566975|gb|EIW60150.1| proteasome component pts1 [Trametes versicolor FP-101664 SS1]
Length = 310
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/232 (59%), Positives = 172/232 (74%), Gaps = 7/232 (3%)
Query: 29 PSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
PSF +P D F + D +K GTTTLAF +K GV+VA DSRA+ G Y+
Sbjct: 49 PSFKIPAVADPSSFLRMHTDDHADPSCRIKIKHGTTTLAFRYKGGVIVAVDSRATAGSYV 108
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S +VKK+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL N+ RISV ASK L+N+
Sbjct: 109 ASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYLSNL 168
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+YSY+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD GYK+D
Sbjct: 169 VYSYKGMGLSMGTMICGWDKTGPAIFYVDSDGSRLKGDLFSVGSGSTFAYGVLDQGYKWD 228
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
++ EEA EL RR+IY A RDA SG ++Y+V +GWK + DV ELHY+
Sbjct: 229 LTDEEAHELGRRSIYAAGHRDAFSGNTVNLYHVQQDGWKFIGNYDVSELHYN 280
>gi|302334368|gb|ADL27419.1| proteasome subunit beta type [Pheronema raphanus]
Length = 279
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 144/251 (57%), Positives = 176/251 (70%), Gaps = 3/251 (1%)
Query: 4 DTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIF 63
D S L S SP L P P L + + + ++ GTTTLAF +
Sbjct: 27 DNSALHSFSPLHSKPFTLPP--GRDPVLFLQ-QQNLIHNEDPSSPKIEFDHGTTTLAFKY 83
Query: 64 KEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHEL 123
+ GV+VA DSRA+ G +I+SQ+ KK+IEINPY+LGTMAGGAADC +W R L +CRL+EL
Sbjct: 84 QGGVIVAVDSRATAGSWIASQTCKKVIEINPYLLGTMAGGAADCSYWERRLAQECRLYEL 143
Query: 124 ANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV 183
NK RISV ASK+L+N LY Y+GMGLSVGTMI GWD+ GPGLYYVDS+G R+ FSV
Sbjct: 144 RNKERISVAAASKVLSNFLYYYKGMGLSVGTMICGWDKKGPGLYYVDSDGTRMTHHMFSV 203
Query: 184 GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLS 243
GSGS YAYGVLDSGYK+D+S +EA EL RR+IYHAT RDA SGGV ++Y++ GW K+S
Sbjct: 204 GSGSVYAYGVLDSGYKWDLSDDEARELGRRSIYHATHRDAYSGGVVNLYHMKETGWIKIS 263
Query: 244 GDDVGELHYHY 254
DDV LHY Y
Sbjct: 264 QDDVMTLHYKY 274
>gi|90076164|dbj|BAE87762.1| unnamed protein product [Macaca fascicularis]
Length = 263
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 144/248 (58%), Positives = 181/248 (72%), Gaps = 4/248 (1%)
Query: 14 FFGSGD--ELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAA 71
FFG G +L +PS L L+ ++ + H GTTTLAF F+ GV+VAA
Sbjct: 18 FFGLGGRADLLDIGPGSPSDGLSLAAPGWGVPEEPGIEMLH--GTTTLAFKFRHGVIVAA 75
Query: 72 DSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 131
DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAAD FW R L +CR++EL NK RISV
Sbjct: 76 DSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADRSFWERLLARQCRIYELRNKERISV 135
Query: 132 TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAY 191
ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAY
Sbjct: 136 AAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 192 GVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
GV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 252 YHYYPVTP 259
Y TP
Sbjct: 256 EKYSGSTP 263
>gi|397572438|gb|EJK48257.1| hypothetical protein THAOC_32963 [Thalassiosira oceanica]
Length = 248
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 131/210 (62%), Positives = 165/210 (78%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
D +K AKGTTTLAF F G++V+ DSR++MG YI+S +VKK+IEINP++LGTMAGGA
Sbjct: 28 DQGQEVKFAKGTTTLAFKFNGGIIVSVDSRSTMGAYIASGTVKKVIEINPFLLGTMAGGA 87
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADC FW RNLGI+CR++EL NK+RISV ASKLLAN + SYRG GLS+GTMI GWDETGP
Sbjct: 88 ADCSFWERNLGIQCRMYELRNKKRISVAAASKLLANTMRSYRGYGLSMGTMITGWDETGP 147
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
LYYVD +G RL G FSVGSGS YAYGVLD+ Y+ D+++EEA +L +RAIYHA RDA
Sbjct: 148 QLYYVDDDGTRLHGRYFSVGSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAM 207
Query: 225 SGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SG + ++Y+V +GW K+ D ++HY +
Sbjct: 208 SGSINNLYHVTKDGWVKIHAIDTNDMHYQF 237
>gi|1405329|dbj|BAA10935.1| nurse shark LMPX [Ginglymostoma cirratum]
Length = 259
Score = 283 bits (723), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 139/234 (59%), Positives = 170/234 (72%)
Query: 21 LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
L P+ S F L E + + ++ GTTTL F F GV+VA DSRA+ G Y
Sbjct: 21 LGPDRSLGLDFLLAPGGQHGEQESGSGDRIEILHGTTTLGFRFAHGVIVAVDSRATAGSY 80
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
++SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN
Sbjct: 81 VASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 140
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGVLD Y+
Sbjct: 141 MVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRVSGQIFSVGSGSVYAYGVLDRAYRH 200
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
DMS EA ELA++AIYHAT+RDA SGG+ S+Y+V GW ++ DDV +LH Y
Sbjct: 201 DMSPTEAYELAKQAIYHATYRDAYSGGIVSLYHVKETGWVRICRDDVMDLHQKY 254
>gi|56753153|gb|AAW24786.1| SJCHGC05978 protein [Schistosoma japonicum]
gi|226471270|emb|CAX70716.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
gi|226488126|emb|CAX75728.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
gi|226488128|emb|CAX75729.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
gi|226488130|emb|CAX75730.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
Length = 264
Score = 282 bits (722), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 147/261 (56%), Positives = 182/261 (69%), Gaps = 14/261 (5%)
Query: 4 DTSGLESTSPFFGSGDE--LCPELS--------AAPSFSLPLSTDFDEFQKDTKATLKHA 53
D +G E S F E +C LS + S+ P+ K+TK H
Sbjct: 5 DITGFEVISKFVKDPQEKDVCTHLSEVDLYWSRKSESYIKPIEHGIQ--CKETKINFLH- 61
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTTTLAF + GV+VA DSRA+ G YI+S + KKIIEIN Y+LGTMAGGAADCQFW R
Sbjct: 62 -GTTTLAFKYSGGVIVATDSRATAGSYIASGTTKKIIEINKYLLGTMAGGAADCQFWERV 120
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L CRL EL NK RISV ASKLLAN++Y+Y+GMGLS+GT I GWD+ GPG+YYVD++G
Sbjct: 121 LAKHCRLFELRNKERISVAAASKLLANMVYNYKGMGLSIGTTIVGWDKNGPGVYYVDTDG 180
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R G FSVGSGSPYAYGVLD+GYK++MS E+A ELA+R+I+HAT RDAASGG ++Y+
Sbjct: 181 NRTPGNLFSVGSGSPYAYGVLDAGYKYEMSDEDAYELAKRSIFHATHRDAASGGFVNLYH 240
Query: 234 VGPNGWKKLSGDDVGELHYHY 254
+ +GWK + DVGEL+Y Y
Sbjct: 241 MKEDGWKFIGIFDVGELYYKY 261
>gi|226471266|emb|CAX70714.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
Length = 264
Score = 282 bits (722), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 147/261 (56%), Positives = 183/261 (70%), Gaps = 14/261 (5%)
Query: 4 DTSGLESTSPFFGSGDE--LCPELS--------AAPSFSLPLSTDFDEFQKDTKATLKHA 53
D +G E S F E +C LS + S+ P+ K+TK H
Sbjct: 5 DITGFEVISKFVKDPQEKDVCTHLSEVDLYWSRKSESYIKPIEHGIQ--CKETKINFLH- 61
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTTTLAF + GV+VAADSRA+ G YI+S + KKIIEIN Y+LGTMAGGAADCQFW R
Sbjct: 62 -GTTTLAFKYSGGVIVAADSRATAGSYIASGTTKKIIEINKYLLGTMAGGAADCQFWERV 120
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L CRL EL NK RISV ASKLLAN++Y+Y+GMGLS+GT I GWD+ GPG+YYVD++G
Sbjct: 121 LAKHCRLFELRNKERISVAAASKLLANMVYNYKGMGLSIGTTIVGWDKNGPGVYYVDTDG 180
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R G FSVGSGSPYAYGVLD+GYK++MS ++A ELA+R+I+HAT RDAASGG ++Y+
Sbjct: 181 NRTPGNLFSVGSGSPYAYGVLDAGYKYEMSDKDAYELAKRSIFHATHRDAASGGFVNLYH 240
Query: 234 VGPNGWKKLSGDDVGELHYHY 254
+ +GWK + DVGEL+Y Y
Sbjct: 241 MKEDGWKFIGIFDVGELYYKY 261
>gi|167521858|ref|XP_001745267.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776225|gb|EDQ89845.1| predicted protein [Monosiga brevicollis MX1]
Length = 247
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 165/210 (78%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
D + A GTTTL F ++ GV++A DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGA
Sbjct: 29 DGNVKIHIAHGTTTLGFKYQGGVIIAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGA 88
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADC +W R L ++CRL+EL N RISV ASK+LANI+++YR MGLS+GTM+ GWD+ GP
Sbjct: 89 ADCSYWERYLAMQCRLYELRNGERISVAAASKVLANIVWNYRNMGLSMGTMVCGWDKKGP 148
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
GL+YVDS+G RL FSVGSGS YAYGVLD+GYK+D+S EEA +L RRAIYHATFRDA
Sbjct: 149 GLFYVDSDGTRLTNNMFSVGSGSTYAYGVLDAGYKWDLSDEEAQDLGRRAIYHATFRDAY 208
Query: 225 SGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGG ++Y++ GW K+S D V +LHY Y
Sbjct: 209 SGGTVNLYHMRQTGWVKISADSVHDLHYRY 238
>gi|90991369|dbj|BAE93066.1| low molecular mass polypeptide [Lethenteron camtschaticum]
Length = 204
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 162/200 (81%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC +W R L
Sbjct: 1 GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCMYWERVL 60
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVD EG
Sbjct: 61 AKQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKKGPGLYYVDDEGM 120
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
RL G+ F+VGSGSPYA+GVLDSGY+ D+S EEA +L RRAI AT RDA SGGV ++Y++
Sbjct: 121 RLPGSMFAVGSGSPYAFGVLDSGYREDLSKEEAYDLGRRAIASATHRDAYSGGVVNLYHM 180
Query: 235 GPNGWKKLSGDDVGELHYHY 254
GW K+S DDV EL Y +
Sbjct: 181 CQTGWIKVSQDDVSELQYKF 200
>gi|410928728|ref|XP_003977752.1| PREDICTED: proteasome subunit beta type-5-like [Takifugu rubripes]
Length = 271
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 166/215 (77%), Gaps = 2/215 (0%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
DE + K H GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGT
Sbjct: 55 DEDGVERKIEFLH--GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGT 112
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
MAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTM+ GW
Sbjct: 113 MAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGW 172
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GPGLYYVDSEG R+ G F+VGSGS YAYGV+DSG + D+++EEA EL RRAIY AT
Sbjct: 173 DKRGPGLYYVDSEGNRVCGDLFAVGSGSMYAYGVMDSGLRHDLTVEEACELGRRAIYQAT 232
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+RDA SGG ++Y+V GW ++S DDV LH Y
Sbjct: 233 YRDAYSGGQVNLYHVHSEGWTRVSQDDVLMLHQRY 267
>gi|321469684|gb|EFX80663.1| hypothetical protein DAPPUDRAFT_303852 [Daphnia pulex]
Length = 276
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/267 (55%), Positives = 181/267 (67%), Gaps = 17/267 (6%)
Query: 3 LDTSGLESTSPFFGSGDELCPELS-----------AAPSFSLPLST----DFDEFQKDTK 47
D G+ S S F + EL LS A P S P +T DE ++ K
Sbjct: 4 FDICGINSRSNFKTTEHELEDVLSSFKTIGSPCQLALPPLSCPSNTYSKIPVDEHGREMK 63
Query: 48 ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADC 107
H GTTTL F ++ G+++A DSRA+ G YI S SVKKIIEIN ++LGTMAGGAADC
Sbjct: 64 INYDH--GTTTLGFKYQGGIVLAVDSRATGGQYIGSGSVKKIIEINDFLLGTMAGGAADC 121
Query: 108 QFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLY 167
+W R L +CRL+EL NK RISV ASKLL N++Y+Y+GMGLS+G MIAGWD+ GPGLY
Sbjct: 122 TYWERVLSKQCRLYELRNKERISVAAASKLLVNMVYNYKGMGLSMGVMIAGWDKKGPGLY 181
Query: 168 YVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGG 227
YVD++G R G FSVGSGS YAYGVLDSGYK D++ EEA EL RRAIYHAT+RDA+SGG
Sbjct: 182 YVDNDGTRTPGQVFSVGSGSLYAYGVLDSGYKPDLTDEEAYELGRRAIYHATYRDASSGG 241
Query: 228 VASVYYVGPNGWKKLSGDDVGELHYHY 254
+ VY++ GW K+S D ELHY Y
Sbjct: 242 IIRVYHIKSTGWVKISEQDCTELHYQY 268
>gi|1405325|dbj|BAA10933.1| LMP7 of nurse shark [Ginglymostoma cirratum]
Length = 274
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/257 (55%), Positives = 179/257 (69%), Gaps = 10/257 (3%)
Query: 13 PFFGSGDELCPELSAAP-----SFSLPLSTDFDEFQK-----DTKATLKHAKGTTTLAFI 62
P S L P P +P+ D +F K D +K GTTTLAF
Sbjct: 18 PLGQSSLRLSPGQQLGPGARDGQLVVPVGLDPVKFLKPYIDGDDGVEIKLHHGTTTLAFK 77
Query: 63 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 122
F+ GVMVA DSRAS G YIS+Q KK+IEINPY+LGTM+G AADC FW R L +CR+++
Sbjct: 78 FQHGVMVAVDSRASAGSYISTQMFKKVIEINPYLLGTMSGSAADCVFWERMLAKQCRIYK 137
Query: 123 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS 182
L NK+RISV+ ASKLLAN++ Y+GMGLS+GTMI GWDE GPGLYYV+ G RL G+ FS
Sbjct: 138 LRNKKRISVSAASKLLANMVSEYKGMGLSMGTMICGWDEKGPGLYYVNDGGMRLSGSMFS 197
Query: 183 VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKL 242
GSG YAYGV+DSGY++D++++EA +LA+RAIYHAT RDA SGG ++Y++ NGW K+
Sbjct: 198 TGSGCSYAYGVMDSGYRYDLTVKEAYDLAQRAIYHATHRDAYSGGTVNMYHMRENGWIKV 257
Query: 243 SGDDVGELHYHYYPVTP 259
S +DVG LH+ Y TP
Sbjct: 258 SQEDVGVLHHRYTAETP 274
>gi|1405321|dbj|BAA10931.1| LMPX of hagfish [Myxine glutinosa]
Length = 273
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/254 (57%), Positives = 177/254 (69%), Gaps = 10/254 (3%)
Query: 8 LESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLA 60
LE FG E L SF++P D EF K D K H GTTTLA
Sbjct: 19 LEHRRECFGELQEALGGLHEQ-SFAIPRGLDPVEFLKPFASGESDVKIEFHH--GTTTLA 75
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
F F GV+VA DSRA+ G Y++SQ+VKK+IEINPY+LGTMAGGAADC +W R L CR+
Sbjct: 76 FKFDHGVIVAVDSRATAGSYVASQTVKKVIEINPYLLGTMAGGAADCMYWERVLSKHCRI 135
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
+EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVD EG RL G
Sbjct: 136 YELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDEEGTRLSGGM 195
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
F+VGSGS YAYGVLDS ++ DM+ EEA +L RRAI HAT RDA SGGV ++Y++ +GW
Sbjct: 196 FAVGSGSTYAYGVLDSNHRPDMTPEEAYDLGRRAICHATHRDAYSGGVVNLYHMQQSGWI 255
Query: 241 KLSGDDVGELHYHY 254
K+S +DV EL Y +
Sbjct: 256 KVSQNDVSELQYKF 269
>gi|149627581|ref|XP_001509497.1| PREDICTED: proteasome subunit beta type-5-like [Ornithorhynchus
anatinus]
Length = 263
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 163/203 (80%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G FSVGSGS YAYG++D GY D+ +E A +LARRAIY AT+RDA SGGV ++Y+V
Sbjct: 179 RVSGVTFSVGSGSVYAYGIMDRGYSHDLEVEAAYDLARRAIYQATYRDAYSGGVVNLYHV 238
Query: 235 GPNGWKKLSGDDVGELHYHYYPV 257
+GW ++S ++V +LH Y V
Sbjct: 239 REDGWIRVSSENVADLHDKYQGV 261
>gi|403173929|ref|XP_003332961.2| 20S proteasome subunit beta 5 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170757|gb|EFP88542.2| 20S proteasome subunit beta 5 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 289
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/238 (58%), Positives = 173/238 (72%), Gaps = 10/238 (4%)
Query: 23 PELSAAPSFSLP--------LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
P + P F LP L T D+ D K +KH GTTTLAF F+ G++VA DSR
Sbjct: 36 PGRTPVPRFDLPGVKDPVSFLRTHTDDRSADAKIKIKH--GTTTLAFRFQHGIIVAVDSR 93
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G YI+S +VKK+IEINP++LGTMAGGAADCQ+W LGI+CRLHEL NK RISV A
Sbjct: 94 ATAGSYIASGTVKKVIEINPFLLGTMAGGAADCQYWETYLGIQCRLHELRNKSRISVAAA 153
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
SK L+N++YSY+GMGLS+GTMI GWD GPGLYYVDS+G RLKG FSVGSGS +AYGVL
Sbjct: 154 SKYLSNLVYSYKGMGLSMGTMICGWDGAGPGLYYVDSDGTRLKGDVFSVGSGSTFAYGVL 213
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
D GY +D+S+++A EL RR+IY A RDA SG ++Y+V +GW ++ D +LHY
Sbjct: 214 DQGYHWDLSVDDALELGRRSIYAAGHRDAFSGNTLNLYHVKEDGWHFINNYDFNKLHY 271
>gi|281208762|gb|EFA82937.1| proteasome subunit beta type 5 [Polysphondylium pallidum PN500]
Length = 277
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 169/214 (78%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ A GTTTLAF + GV+VA DS+++ G Y++S++VKK+IEI PY+LGTMAGGAADC +
Sbjct: 57 IEMAHGTTTLAFQYAGGVIVAVDSKSTQGSYVASRTVKKVIEITPYLLGTMAGGAADCSY 116
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R LG +CRL EL NK ISV ASK+LANI+Y Y+G GLS+GTM+ GWD+TGP LYYV
Sbjct: 117 WERELGRQCRLFELRNKEMISVAAASKILANIVYGYKGYGLSMGTMVTGWDKTGPCLYYV 176
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
DSEG RLKG RF+VGSGS YAYGVLDSG+ ++M+ E+A EL RR++YHAT RDA SGG
Sbjct: 177 DSEGTRLKGLRFAVGSGSTYAYGVLDSGFDWNMTDEQACELGRRSVYHATHRDAMSGGFI 236
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVE 263
+VY+V +GWKK+S DD +L+ YY V + V+
Sbjct: 237 NVYHVQKDGWKKISSDDCFQLYQKYYNVKATGVD 270
>gi|6715438|gb|AAF26416.1|AF217726_1 20S proteasome beta5 subunit [Drosophila melanogaster]
Length = 282
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/235 (60%), Positives = 170/235 (72%), Gaps = 4/235 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKD---TKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F PL + +E Q + T + GTTTL F FK GV++A DSRA+ G
Sbjct: 39 PYTLAAPPFENPLH-NLNEIQANGDKTGVKINFDHGTTTLGFKFKGGVLLAVDSRATGGS 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQS+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS YAYGVLDSGY
Sbjct: 158 NIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYH 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+D+ +EA EL RRAIYHATFRDA SGG+ VY++ +GW +S D ELHY Y
Sbjct: 218 WDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELHYMY 272
>gi|195333237|ref|XP_002033298.1| GM21240 [Drosophila sechellia]
gi|194125268|gb|EDW47311.1| GM21240 [Drosophila sechellia]
Length = 282
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/235 (60%), Positives = 170/235 (72%), Gaps = 4/235 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F PL + ++ Q + T + GTTTL F FK GV++A DSRA+ G
Sbjct: 39 PYTLAAPPFENPLH-NLNQIQANGDKTGIKIDFDHGTTTLGFKFKGGVLLAVDSRATGGS 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQS+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS YAYGVLDSGY
Sbjct: 158 NIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYH 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+D+ EEA EL RRAIYHATFRDA SGG+ VY++ +GW +S D ELHY Y
Sbjct: 218 WDLEDEEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELHYKY 272
>gi|195582278|ref|XP_002080955.1| GD10758 [Drosophila simulans]
gi|194192964|gb|EDX06540.1| GD10758 [Drosophila simulans]
Length = 282
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/235 (60%), Positives = 170/235 (72%), Gaps = 4/235 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F PL + ++ Q + T + GTTTL F FK GV++A DSRA+ G
Sbjct: 39 PYTLAAPPFENPLH-NLNQIQANGDKTGIKIDFDHGTTTLGFKFKGGVLLAVDSRATGGS 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQS+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS YAYGVLDSGY
Sbjct: 158 NIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYH 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+D+ EEA EL RRAIYHATFRDA SGG+ VY++ +GW +S D ELHY Y
Sbjct: 218 WDLEDEEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELHYKY 272
>gi|18539490|gb|AAL74417.1| proteosome PSMB5/8 protein [Branchiostoma lanceolatum]
Length = 194
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/194 (68%), Positives = 160/194 (82%)
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTLAF ++ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 1 TTLAFKWQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERVLAE 60
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+CR++EL NK RISV ASKLLANI+Y+Y+GMGLS+GTMI GWD+ GPGLYYVDS+G RL
Sbjct: 61 QCRIYELRNKERISVAAASKLLANIVYNYKGMGLSMGTMIVGWDKRGPGLYYVDSDGTRL 120
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
FSVGSGS YAYGVLDSGYK+DMS+EEA EL +R+IYHAT RDA SGGV ++Y++
Sbjct: 121 SNNMFSVGSGSTYAYGVLDSGYKWDMSVEEAYELGKRSIYHATHRDAYSGGVVNLYHMKE 180
Query: 237 NGWKKLSGDDVGEL 250
GW K+S DV +L
Sbjct: 181 TGWIKVSQTDVMDL 194
>gi|409045696|gb|EKM55176.1| hypothetical protein PHACADRAFT_255622 [Phanerochaete carnosa
HHB-10118-sp]
Length = 300
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/235 (58%), Positives = 172/235 (73%), Gaps = 7/235 (2%)
Query: 26 SAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
S P F++P D F + D +K GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 41 SGVPKFNIPAVPDPSAFLRLHTDDFADPSCRIKIKHGTTTLAFRFRGGVIVAVDSRATAG 100
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
YI+S +VKK+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL N+ RISV ASK L
Sbjct: 101 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYL 160
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
+N++YSY+GMGLS+GTMI GWD+TGP +YYVDS+G RLKG FSVGSGS +AYGVLD GY
Sbjct: 161 SNLVYSYKGMGLSMGTMICGWDKTGPAVYYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGY 220
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
++D++ EEA EL RR+IY A RDA SG ++Y+V +GWK + DV ++HY
Sbjct: 221 RWDLTDEEAQELGRRSIYAAGHRDAFSGNTINLYHVQEDGWKFIGNYDVSKMHYE 275
>gi|18124203|gb|AAL59862.1|AF363583_1 proteasome beta-subunit LMP7 [Heterodontus francisci]
Length = 276
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/264 (52%), Positives = 183/264 (69%), Gaps = 15/264 (5%)
Query: 6 SGLESTSPF-FGSGDELCPELSAAPSFSLPLSTDFDEFQKDTK-----ATLKHAKGTTTL 59
GL+ +PF FG+G+ ++PL D EF K +K GTTTL
Sbjct: 22 QGLDKRNPFPFGAGN---------GELAVPLGLDPVEFLKTCNEGEEGVRIKFQHGTTTL 72
Query: 60 AFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR 119
AF F+ GV+VA DSRAS G +++S K+IEINPY+LGTM+G AADCQ+W R L +CR
Sbjct: 73 AFKFEHGVIVAVDSRASAGNFLASGDANKVIEINPYLLGTMSGSAADCQYWERLLAKQCR 132
Query: 120 LHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT 179
L++L NK+RI+V+ ASKLL N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G
Sbjct: 133 LYKLRNKQRITVSAASKLLCNMMCEYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGN 192
Query: 180 RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
FS G G+ YAYGV+DSGY++D+++EEA +L RRAIYHAT RDA +GG ++Y++ +GW
Sbjct: 193 MFSTGCGNAYAYGVVDSGYRYDLTVEEAYDLGRRAIYHATHRDAYTGGFINMYHMREDGW 252
Query: 240 KKLSGDDVGELHYHYYPVTPSTVE 263
K+S D+VGELHY Y + V+
Sbjct: 253 IKVSKDNVGELHYKYAAEKQNLVQ 276
>gi|225706814|gb|ACO09253.1| Proteasome subunit beta type 5 precursor [Osmerus mordax]
Length = 221
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 167/215 (77%), Gaps = 2/215 (0%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
DE + K H GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGT
Sbjct: 5 DEEGPERKIEFLH--GTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGT 62
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
MAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTM+ GW
Sbjct: 63 MAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGW 122
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GPGLYYVDSEG R+ G F+VGSGS YAYGV+DSG + D+++E+A EL RRAIY AT
Sbjct: 123 DKRGPGLYYVDSEGNRVCGDLFAVGSGSMYAYGVVDSGLRQDLTVEQACELGRRAIYQAT 182
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+RDA SGG ++Y+V GW ++S +DV LH+ Y
Sbjct: 183 YRDAYSGGQVNLYHVHSKGWDRVSQEDVLMLHHQY 217
>gi|21355573|ref|NP_652014.1| proteasome beta5 subunit, isoform A [Drosophila melanogaster]
gi|24652553|ref|NP_724974.1| proteasome beta5 subunit, isoform B [Drosophila melanogaster]
gi|7303698|gb|AAF58748.1| proteasome beta5 subunit, isoform A [Drosophila melanogaster]
gi|17862098|gb|AAL39526.1| LD08717p [Drosophila melanogaster]
gi|21627516|gb|AAM68751.1| proteasome beta5 subunit, isoform B [Drosophila melanogaster]
gi|220942740|gb|ACL83913.1| Prosbeta5-PA [synthetic construct]
gi|220952918|gb|ACL89002.1| Prosbeta5-PA [synthetic construct]
Length = 282
Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/235 (59%), Positives = 170/235 (72%), Gaps = 4/235 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKD---TKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F PL + ++ Q + T + GTTTL F FK GV++A DSRA+ G
Sbjct: 39 PYTLAAPPFENPLH-NLNQIQANGDKTGVKINFDHGTTTLGFKFKGGVLLAVDSRATGGS 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQS+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS YAYGVLDSGY
Sbjct: 158 NIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYH 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+D+ +EA EL RRAIYHATFRDA SGG+ VY++ +GW +S D ELHY Y
Sbjct: 218 WDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELHYMY 272
>gi|343426308|emb|CBQ69839.1| probable PRE2-20S core proteasome subunit (beta5) [Sporisorium
reilianum SRZ2]
Length = 319
Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/237 (59%), Positives = 174/237 (73%), Gaps = 8/237 (3%)
Query: 24 ELSAAP-SFSLP-------LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
+L AP F LP LS D + A +K A GTTTLAF F+ G++V DSRA
Sbjct: 25 QLMGAPGQFDLPNMDPATFLSQYTDVDSSNPAAKIKLAHGTTTLAFRFRGGIIVCVDSRA 84
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G YI+S +VKK+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL NK RISV AS
Sbjct: 85 TAGSYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAAS 144
Query: 136 KLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD 195
K L+N++Y Y+GMGLS+GTMI GWD+TGP L+YVDS+G RLKG FSVGSGS +AYGVLD
Sbjct: 145 KYLSNLVYGYKGMGLSMGTMICGWDKTGPALFYVDSDGTRLKGDVFSVGSGSTFAYGVLD 204
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
GYK+D+S +EA EL RR+IY A RDA SG ++Y+V NGW+ ++ DV +LHY
Sbjct: 205 QGYKWDLSDQEAQELGRRSIYAAAHRDAYSGNTVNLYHVRENGWEFIANYDVSKLHY 261
>gi|443900017|dbj|GAC77344.1| 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2
[Pseudozyma antarctica T-34]
Length = 745
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/257 (56%), Positives = 182/257 (70%), Gaps = 14/257 (5%)
Query: 10 STSPFFGSGDELCPELSA------AP-SFSLP-------LSTDFDEFQKDTKATLKHAKG 55
+TS F G+ D +++A AP F LP LS D + A +K A G
Sbjct: 339 TTSAFAGANDAFGGDVAAQDQLMGAPGQFDLPNMDPATFLSQYTDVDSSNPAAKIKLAHG 398
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTTLAF F+ G++V DSRA+ G YI+S +VKK+IEINPY+LGTMAGGAADCQ+W LG
Sbjct: 399 TTTLAFRFQGGIIVCVDSRATAGSYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLG 458
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
I+CRLHEL NK RISV ASK L+N++Y Y+GMGLS+GTMI GWD+TGP L+YVDS+G R
Sbjct: 459 IQCRLHELRNKERISVAAASKYLSNLVYGYKGMGLSMGTMICGWDKTGPALFYVDSDGTR 518
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
LKG FSVGSGS +AYGVLD GYK+D++ +EA EL RR+IY A RDA SG ++Y+V
Sbjct: 519 LKGDVFSVGSGSTFAYGVLDQGYKWDLTDDEAQELGRRSIYAAAHRDAYSGNTVNLYHVR 578
Query: 236 PNGWKKLSGDDVGELHY 252
+GW+ + DV +LHY
Sbjct: 579 EDGWEFIDNYDVSKLHY 595
>gi|195382663|ref|XP_002050049.1| GJ21921 [Drosophila virilis]
gi|194144846|gb|EDW61242.1| GJ21921 [Drosophila virilis]
Length = 279
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/237 (59%), Positives = 171/237 (72%), Gaps = 8/237 (3%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKD-----TKATLKHAKGTTTLAFIFKEGVMVAADSRASM 77
P AAP F PL + ++ Q + K H GTTTL F ++ GV++A DSRA+
Sbjct: 39 PYTLAAPPFENPLE-NLNKIQANASNSGVKINFDH--GTTTLGFKYQGGVILAVDSRATG 95
Query: 78 GGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKL 137
G YI SQS+KKI+EIN ++LGT+AGGAADC +W R L +CRLHEL NK RISV ASK+
Sbjct: 96 GQYIGSQSMKKIVEINQFLLGTLAGGAADCVYWDRVLAKECRLHELRNKERISVAAASKI 155
Query: 138 LANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSG 197
+ANI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS YA+GVLDSG
Sbjct: 156 MANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNVFSVGSGSIYAFGVLDSG 215
Query: 198 YKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
Y +D+ EA EL RRAIYHATFRDA SGG+ VY++ PNGW K+S D ELHY Y
Sbjct: 216 YHWDLKDTEAQELGRRAIYHATFRDAYSGGIVRVYHMTPNGWIKISETDCMELHYKY 272
>gi|328849031|gb|EGF98220.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 296
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/237 (56%), Positives = 172/237 (72%), Gaps = 10/237 (4%)
Query: 24 ELSAAPSFSLP--------LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
E P+F P L D+ D++ ++H GTTTLAF FK G++VA DSRA
Sbjct: 40 ESDPVPTFEFPAVDDPAAFLRAHTDDRSPDSRIKIRH--GTTTLAFRFKHGIVVAVDSRA 97
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G YI+S +VKK+IEINP++LGTMAGGAADCQ+W LG++CRLHEL NK RISV AS
Sbjct: 98 TAGSYIASGTVKKVIEINPFLLGTMAGGAADCQYWETYLGMQCRLHELRNKSRISVAAAS 157
Query: 136 KLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD 195
K L+N++YSY+GMGLS+GTMI GWD++GP LYYVDS+G RLKG FSVGSGS +AYGVLD
Sbjct: 158 KHLSNLVYSYKGMGLSMGTMICGWDKSGPALYYVDSDGTRLKGDCFSVGSGSTFAYGVLD 217
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
GY +D+ +EEA EL RR+IY A RDA SG ++Y+V +GW+ + D +LHY
Sbjct: 218 QGYHWDLEVEEALELGRRSIYAAGHRDAFSGNTLNLYHVKEDGWQFIGNYDFNKLHY 274
>gi|402225220|gb|EJU05281.1| proteasome-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 315
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/231 (59%), Positives = 169/231 (73%), Gaps = 7/231 (3%)
Query: 29 PSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
PSF +P D F + D +K GTTTLAF FK G++VA DSRA+ G YI
Sbjct: 50 PSFKVPSLADPSAFLRMHTDDYADPSCRIKIQHGTTTLAFRFKGGIIVAVDSRATAGSYI 109
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S +VKK+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL N+ RISV ASK L+N+
Sbjct: 110 ASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIECRLHELRNRERISVAAASKFLSNL 169
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+YSY+GMGLS+GTMI GWD+TGP L+YVDS+G RLKG FSVGSGS YAYGVLD GY +D
Sbjct: 170 VYSYKGMGLSMGTMICGWDKTGPALFYVDSDGTRLKGDIFSVGSGSTYAYGVLDQGYHWD 229
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+S E+A EL RR+IY A RDA SG ++Y+V GW+ L DV ++HY
Sbjct: 230 LSDEDAQELGRRSIYAAGHRDAYSGNTINLYHVKEQGWEFLGNYDVTKMHY 280
>gi|321470713|gb|EFX81688.1| hypothetical protein DAPPUDRAFT_303318 [Daphnia pulex]
Length = 277
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/236 (59%), Positives = 170/236 (72%), Gaps = 6/236 (2%)
Query: 23 PELSAAPSFSLPLST----DFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
P A P P +T DE ++ K H GTTTL F ++ G+++A DSRA+ G
Sbjct: 36 PCQLALPPLGCPSNTYSKNPVDENGREMKINYDH--GTTTLGFKYQGGIVLAVDSRATGG 93
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
YI S SVKKIIEIN ++LGTMAGGAADC +W R L +CRL+EL NK RISV ASKLL
Sbjct: 94 QYIGSGSVKKIIEINDFLLGTMAGGAADCTYWERVLSKQCRLYELRNKERISVAAASKLL 153
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
N++Y+Y+GMGLS+G MIAGWD+ GPGLYYVD++G R G FSVGSGS YAYGVLDSGY
Sbjct: 154 VNMVYNYKGMGLSMGVMIAGWDKKGPGLYYVDNDGTRTPGQVFSVGSGSLYAYGVLDSGY 213
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+ D+S EEA EL RRAIYHAT+RDA+SGG+ VY++ GW K+S D ELHY Y
Sbjct: 214 RNDLSDEEAYELGRRAIYHATYRDASSGGIIRVYHIKSTGWVKISEQDCTELHYQY 269
>gi|390597775|gb|EIN07174.1| N-terminal nucleophile aminohydrolase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 317
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/231 (58%), Positives = 170/231 (73%), Gaps = 7/231 (3%)
Query: 29 PSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
P+FS+P D F + D +K GTTTLAF F+ GV+VA DSRA+ G Y+
Sbjct: 49 PNFSVPNVPDPAAFLRLHTDDHADPSCRIKIKHGTTTLAFRFQGGVIVAVDSRATAGSYV 108
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S +VKK+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL N+ RISV ASK L+N+
Sbjct: 109 ASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYLSNL 168
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y Y+GMGLS+GTMI GWD+TGP + YVDS+G RLKG FSVGSGS YAYGVLD GY++D
Sbjct: 169 VYGYKGMGLSMGTMICGWDKTGPAVVYVDSDGTRLKGDLFSVGSGSTYAYGVLDQGYRWD 228
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
++ EEA EL RR+IY A RDA SG +VY++ +GWK + DV ++HY
Sbjct: 229 LTDEEAQELGRRSIYAAGHRDAFSGNTCNVYHIKEDGWKFIGNFDVSQMHY 279
>gi|154345734|ref|XP_001568804.1| putative proteasome beta 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066146|emb|CAM43936.1| putative proteasome beta 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 302
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 164/203 (80%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTTLAF F G++VA DSRAS G YI+SQ+V K++EIN Y+LGT+AGGAADCQ+W R
Sbjct: 98 KGTTTLAFRFDGGIIVAVDSRASTGQYIASQTVLKVLEINDYLLGTLAGGAADCQYWERV 157
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
LG++CRL EL N RISV ASK+LANI Y+YR GLS+GTM+AGWD+ GP LYYVD +G
Sbjct: 158 LGMECRLWELRNGSRISVAAASKILANITYAYRNHGLSMGTMVAGWDQFGPSLYYVDDKG 217
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+K FSVGSGS YAYGVLD+GY+ D+S+E+A +LARR+I+HAT+RD ASGG+ +VY+
Sbjct: 218 SRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYH 277
Query: 234 VGPNGWKKLSGDDVGELHYHYYP 256
+ NGW K+S DD +L+ Y+P
Sbjct: 278 IHANGWTKISRDDQTKLYDRYFP 300
>gi|392595619|gb|EIW84942.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 314
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/231 (58%), Positives = 169/231 (73%), Gaps = 7/231 (3%)
Query: 29 PSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
PSF +P D F + D +K GTTTLAF FK GV+VA DSRA+ G Y+
Sbjct: 49 PSFEVPAVPDPSAFLRLHTDDHADPSCRIKIQHGTTTLAFRFKGGVIVAVDSRATAGSYV 108
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S +VKK+IEINPY+LGTMAGGAADCQ+W LG+ CRLHEL N+ RISV+ ASK L+N+
Sbjct: 109 ASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMHCRLHELRNRERISVSAASKYLSNL 168
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y Y+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD GY++D
Sbjct: 169 VYGYKGMGLSMGTMICGWDKTGPAVFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWD 228
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
MS EEA EL RR+IY A RDA SG ++Y+V GW+ + D+ +LHY
Sbjct: 229 MSDEEAQELGRRSIYAAGHRDAFSGNTVNLYHVKEEGWQFIGNYDISQLHY 279
>gi|194884165|ref|XP_001976166.1| GG20151 [Drosophila erecta]
gi|190659353|gb|EDV56566.1| GG20151 [Drosophila erecta]
Length = 282
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/232 (59%), Positives = 168/232 (72%), Gaps = 4/232 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F PL + ++ Q + T + GTTTL F FK GV++A DSRA+ G
Sbjct: 39 PYTLAAPPFENPLH-NLNQIQANADKTGIKIDFDHGTTTLGFKFKGGVLLAVDSRATGGS 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQS+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS YAYGVLDSGY
Sbjct: 158 NIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYH 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
+D+ EEA EL RRAIYHATFRDA SGG+ VY++ +GW +S D ELH
Sbjct: 218 WDLEDEEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELH 269
>gi|336367168|gb|EGN95513.1| hypothetical protein SERLA73DRAFT_186558 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379886|gb|EGO21040.1| hypothetical protein SERLADRAFT_475676 [Serpula lacrymans var.
lacrymans S7.9]
Length = 317
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/231 (58%), Positives = 171/231 (74%), Gaps = 7/231 (3%)
Query: 29 PSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
PSF++P +D F + D +K GTTTLAF F+ GV+VA DSRA+ G Y+
Sbjct: 48 PSFTVPSVSDPAAFLRLHTDDHADPNCKIKIQHGTTTLAFRFQGGVIVAVDSRATAGSYV 107
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S +VKK+IEINPY+LGTMAGGAADCQ+W LG+ CRLHEL N+ RISV+ ASK L+N+
Sbjct: 108 ASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMHCRLHELRNRERISVSAASKYLSNL 167
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y Y+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD GY++D
Sbjct: 168 VYGYKGMGLSMGTMICGWDKTGPAVFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWD 227
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+S EEA EL RR+IY A RDA SG ++Y+V NGW + D+ +LHY
Sbjct: 228 LSDEEAQELGRRSIYAAGHRDAFSGNTCNLYHVKENGWNFIGNYDISKLHY 278
>gi|198285521|gb|ACH85299.1| proteasome (prosome, macropain) subunit beta type 5 [Salmo salar]
Length = 269
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 164/211 (77%), Gaps = 3/211 (1%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
D K H GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGA
Sbjct: 56 DRKIEFLH--GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGA 113
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+TGP
Sbjct: 114 ADCSFWERLLARQCRVYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKTGP 173
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF-DMSIEEAAELARRAIYHATFRDA 223
GLYYVDSEG R+ G F+VGSGS YAYG++DSG K D+++EEA +L RRAIY AT+RDA
Sbjct: 174 GLYYVDSEGNRVCGDLFAVGSGSMYAYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDA 233
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGG ++Y+V GW ++S DV LH Y
Sbjct: 234 YSGGQVNLYHVHSEGWTRVSQSDVLMLHQQY 264
>gi|221220194|gb|ACM08758.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 164/211 (77%), Gaps = 3/211 (1%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
D K H GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGA
Sbjct: 57 DRKIEFLH--GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGA 114
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+TGP
Sbjct: 115 ADCSFWERLLARQCRVYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKTGP 174
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF-DMSIEEAAELARRAIYHATFRDA 223
GLYYVDSEG R+ G F+VGSGS YAYG++DSG K D+++EEA +L RRAIY AT+RDA
Sbjct: 175 GLYYVDSEGNRVCGDLFAVGSGSMYAYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDA 234
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGG ++Y+V GW ++S DV LH Y
Sbjct: 235 YSGGQVNLYHVHSEGWTRVSQSDVLMLHQQY 265
>gi|1405327|dbj|BAA10934.1| LMP7 [Ginglymostoma cirratum]
Length = 278
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/227 (57%), Positives = 170/227 (74%), Gaps = 5/227 (2%)
Query: 33 LPLSTDFDEFQK-----DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
+P+ D EF K + +K GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 VPVGLDPVEFLKPYSEGEDGVRIKLQHGTTTLAFKFQHGVIVAVDSRASAGNYLASVDAN 102
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L NK+RISV+ ASKLL+N++ YRG
Sbjct: 103 KVIEINPYLLGTMSGSAADCQYWERLLAKQCRLYKLRNKQRISVSAASKLLSNMMCEYRG 162
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY++D+++EEA
Sbjct: 163 MGLSMGSMICGWDKKGPGLYYVDDNGTRLSGNMFSTGCGNVYAYGVVDSGYRYDLTVEEA 222
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+L RRAIYHAT RDA +GG ++Y++ +GW K+S DDVGELH+ Y
Sbjct: 223 YDLGRRAIYHATHRDAYTGGFVNMYHMREDGWIKVSKDDVGELHFKY 269
>gi|221219204|gb|ACM08263.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 164/211 (77%), Gaps = 3/211 (1%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
D K H GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGA
Sbjct: 57 DRKIEFLH--GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGA 114
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+TGP
Sbjct: 115 ADCSFWERLLARQCRVYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKTGP 174
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF-DMSIEEAAELARRAIYHATFRDA 223
GLYYVDSEG R+ G F+VGSGS YAYG++DSG K D+++EEA +L RRAIY AT+RDA
Sbjct: 175 GLYYVDSEGNRVCGDLFAVGSGSMYAYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDA 234
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGG ++Y+V GW ++S DV LH Y
Sbjct: 235 YSGGQVNLYHVHSEGWTRVSQSDVLMLHQQY 265
>gi|223646804|gb|ACN10160.1| Proteasome subunit beta type-8 precursor [Salmo salar]
gi|223672663|gb|ACN12513.1| Proteasome subunit beta type-8 precursor [Salmo salar]
Length = 303
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 133/237 (56%), Positives = 174/237 (73%), Gaps = 12/237 (5%)
Query: 29 PSFSLPLSTDFDEFQKD----------TKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
P ++P+ D EF + K L+H GTTTLAF F+ GVMVA DSRAS G
Sbjct: 65 PELAVPVGVDPAEFLRPLVDSEEGVDGVKINLEH--GTTTLAFKFQHGVMVAVDSRASAG 122
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
Y+S+Q KK+IEINP++LGTM+G AADC +W R L +CR++ L NK RISV+ ASKLL
Sbjct: 123 SYVSTQMFKKVIEINPFLLGTMSGSAADCVYWERVLAKECRIYNLRNKERISVSAASKLL 182
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
AN++ +YRGMGLS+GTMI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY
Sbjct: 183 ANMVVNYRGMGLSMGTMICGWDKKGPGLYYVDDNGLRLCGNMFSTGSGNTYAYGVMDSGY 242
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYY 255
++D+S+ EA +LA+RAI+HAT RDA SGG ++Y++ GW K+S +DVG+L++ +Y
Sbjct: 243 RYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNMYHMRETGWIKVSQEDVGDLYHRFY 299
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
KK+IEINP++LGTM+G AADC +W R L +C
Sbjct: 3 KKVIEINPFLLGTMSGSAADCVYWERVLAKEC 34
>gi|195483626|ref|XP_002090364.1| Prosbeta5 [Drosophila yakuba]
gi|194176465|gb|EDW90076.1| Prosbeta5 [Drosophila yakuba]
Length = 282
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/232 (59%), Positives = 168/232 (72%), Gaps = 4/232 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F PL + ++ Q + T + GTTTL F FK GV++A DSRA+ G
Sbjct: 39 PYALAAPPFENPLH-NLNQIQANADKTGIKIDFDHGTTTLGFKFKGGVLLAVDSRATGGS 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQS+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS YAYGVLDSGY
Sbjct: 158 NIAHEYKGMGLSMGMMLAGFDKRGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYH 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
+D+ EEA EL RRAIYHATFRDA SGG+ VY++ +GW +S D ELH
Sbjct: 218 WDLEDEEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELH 269
>gi|209732230|gb|ACI66984.1| Proteasome subunit beta type-8 precursor [Salmo salar]
Length = 276
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/237 (56%), Positives = 174/237 (73%), Gaps = 12/237 (5%)
Query: 29 PSFSLPLSTDFDEFQKD----------TKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
P ++P+ D EF + K L+H GTTTLAF F+ GVMVA DSRAS G
Sbjct: 38 PELAVPVGVDPAEFLRPLVDSEEGVDGVKINLEH--GTTTLAFKFQHGVMVAVDSRASAG 95
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
Y+S+Q KK+IEINP++LGTM+G AADC +W R L +CR++ L NK RISV+ ASKLL
Sbjct: 96 SYVSTQMFKKVIEINPFLLGTMSGSAADCVYWERVLAKECRIYNLRNKERISVSAASKLL 155
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
AN++ +YRGMGLS+GTMI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY
Sbjct: 156 ANMVVNYRGMGLSMGTMICGWDKKGPGLYYVDDNGLRLCGNMFSTGSGNTYAYGVMDSGY 215
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYY 255
++D+S+ EA +LA+RAI+HAT RDA SGG ++Y++ GW K+S +DVG+L++ +Y
Sbjct: 216 RYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNMYHMRETGWIKVSQEDVGDLYHRFY 272
>gi|209732606|gb|ACI67172.1| Proteasome subunit beta type-5 precursor [Salmo salar]
gi|303661532|gb|ADM16042.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 164/211 (77%), Gaps = 3/211 (1%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
D K H GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGA
Sbjct: 57 DRKIEFLH--GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGA 114
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+TGP
Sbjct: 115 ADCSFWERLLARQCRVYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKTGP 174
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF-DMSIEEAAELARRAIYHATFRDA 223
GLYYVDSEG R+ G F+VGSGS YAYG++DSG K D+++EEA +L RRAIY AT+RDA
Sbjct: 175 GLYYVDSEGNRVCGDLFAVGSGSMYAYGIVDSGLKQKDLTMEEACDLGRRAIYQATYRDA 234
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGG ++Y+V GW ++S DV LH Y
Sbjct: 235 YSGGQVNLYHVHSEGWTRVSQSDVLMLHQQY 265
>gi|157876794|ref|XP_001686739.1| putative proteasome beta 5 subunit [Leishmania major strain
Friedlin]
gi|68129814|emb|CAJ09120.1| putative proteasome beta 5 subunit [Leishmania major strain
Friedlin]
Length = 302
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 163/203 (80%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTTLAF F G++VA DSRAS G YI+SQ+V K++EIN Y+LGT+AGGAADCQ+W R
Sbjct: 98 KGTTTLAFRFNGGIIVAVDSRASTGQYIASQTVLKVLEINDYLLGTLAGGAADCQYWERV 157
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
LG++CRL EL N RI+V ASK+LANI Y+YR GLS+GTM+AGWDE GP LYYVD +G
Sbjct: 158 LGMECRLWELRNGSRITVAAASKILANITYAYRNHGLSMGTMLAGWDEFGPSLYYVDDKG 217
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+K FSVGSGS YAYGVLD+GY+ D+S+E+A +LARR+I+HAT+RD ASGG+ +VY+
Sbjct: 218 SRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYH 277
Query: 234 VGPNGWKKLSGDDVGELHYHYYP 256
V GW K+S DD +L+ Y+P
Sbjct: 278 VHEKGWTKISRDDQTKLYDRYFP 300
>gi|395333726|gb|EJF66103.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 314
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/234 (57%), Positives = 170/234 (72%), Gaps = 7/234 (2%)
Query: 26 SAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
S P F LP D F + D +K GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 46 SGVPMFKLPSVPDPTSFLRMHTDDHADPSCRIKIKHGTTTLAFRFQGGVIVAVDSRATAG 105
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
Y++S +VKK+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL N+ RISV ASK L
Sbjct: 106 SYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYL 165
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
+N++YSY+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD GY
Sbjct: 166 SNLVYSYKGMGLSMGTMICGWDKTGPAIFYVDSDGSRLKGDLFSVGSGSTFAYGVLDQGY 225
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
++D++ EA EL RR+IY A RDA SG ++Y+V +GW+ + DV +LHY
Sbjct: 226 RWDLTDAEAQELGRRSIYAAGHRDAFSGNTVNLYHVKQDGWQFIGNYDVSKLHY 279
>gi|342184267|emb|CCC93748.1| proteasome beta 5 subunit [Trypanosoma congolense IL3000]
Length = 307
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 130/206 (63%), Positives = 162/206 (78%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L KGTTTL F F +G+++A DSRAS G YISSQ+V K++EIN Y+LGTMAGGAADCQ+
Sbjct: 101 LDMKKGTTTLGFHFNDGIIIAVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQY 160
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R LG++CRL EL N RISV ASK+LANI Y YR GLS+GTM+AGWD+ GP LYYV
Sbjct: 161 WERVLGMECRLWELRNNSRISVAAASKILANITYQYRNYGLSMGTMVAGWDQFGPSLYYV 220
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D EG R+K FSVGSGS YAYGVLD GY+ D+++EEA +LARR+I+HAT+RD ASGG+
Sbjct: 221 DGEGTRVKHEIFSVGSGSIYAYGVLDHGYRKDLTVEEACDLARRSIFHATYRDGASGGIV 280
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHYY 255
+VY+V NGW ++S DD +L+ Y+
Sbjct: 281 TVYHVHSNGWTQISRDDQTKLYDRYF 306
>gi|18124200|gb|AAL59861.1|AF363582_1 proteasome beta-subunit LMP7-like protein [Heterodontus francisci]
Length = 285
Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 141/251 (56%), Positives = 179/251 (71%), Gaps = 7/251 (2%)
Query: 6 SGLESTSPF-FGSGD-ELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIF 63
GL+ +PF FG+G+ EL L P + + E + + L H GTTTLAF F
Sbjct: 24 QGLDKRNPFPFGAGNGELAVPLGLDP---VKFLKPYIEGGEGVQIKLHH--GTTTLAFKF 78
Query: 64 KEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHEL 123
+ GVMVA DSRAS G Y +Q KK+IEINPY+LGTM+G AADC +W R L CR+++L
Sbjct: 79 QHGVMVAVDSRASAGSYFDTQMFKKVIEINPYLLGTMSGSAADCVYWERMLAKHCRIYKL 138
Query: 124 ANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV 183
NK+RISV+ ASKLLAN++ Y+GMGLS+GTMI GWD+ GPGLYYV G RL G FS
Sbjct: 139 RNKKRISVSAASKLLANMVSEYKGMGLSMGTMICGWDDKGPGLYYVSGNGLRLAGNMFST 198
Query: 184 GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLS 243
GSGS YAYGV+DSGYK+D+S+++A LA+RAIYHAT RDA SGG ++Y++ NGW K+S
Sbjct: 199 GSGSIYAYGVMDSGYKYDLSVQDAYNLAQRAIYHATHRDAYSGGTVNMYHMRDNGWIKVS 258
Query: 244 GDDVGELHYHY 254
+DVG LH+ Y
Sbjct: 259 QEDVGVLHHKY 269
>gi|389748770|gb|EIM89947.1| N-terminal nucleophile aminohydrolase [Stereum hirsutum FP-91666
SS1]
Length = 312
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/224 (59%), Positives = 172/224 (76%), Gaps = 3/224 (1%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
P+ L L TD D + + ++H GTTTLAF FK GV+V+ DSRA+ G Y++S +VKK
Sbjct: 59 PTAFLRLHTD-DHADPNCRIKIQH--GTTTLAFRFKGGVIVSVDSRATAGSYVASGTVKK 115
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL N+ RISV ASK L+N++YSY+GM
Sbjct: 116 VIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYLSNLVYSYKGM 175
Query: 149 GLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAA 208
GLS+GTMIAGWD+TGP L+YVDS+G RLKG FSVGSGS +AYGVLD GY++D++ EEA
Sbjct: 176 GLSMGTMIAGWDKTGPALFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDEEAQ 235
Query: 209 ELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EL RR+IY A RDA SG ++Y+V +GW + D+ ++HY
Sbjct: 236 ELGRRSIYAAGHRDAFSGNTNNLYHVKEDGWHFIGNYDISKMHY 279
>gi|146104190|ref|XP_001469755.1| putative proteasome beta 5 subunit [Leishmania infantum JPCM5]
gi|398024254|ref|XP_003865288.1| proteasome beta 5 subunit, putative [Leishmania donovani]
gi|134074125|emb|CAM72867.1| putative proteasome beta 5 subunit [Leishmania infantum JPCM5]
gi|322503525|emb|CBZ38611.1| proteasome beta 5 subunit, putative [Leishmania donovani]
Length = 302
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 163/203 (80%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTTLAF F G++VA DSRAS G YI+SQ+V K++EIN Y+LGT+AGGAADCQ+W R
Sbjct: 98 KGTTTLAFRFNGGIIVAVDSRASTGQYIASQTVLKVLEINDYLLGTLAGGAADCQYWERV 157
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
LG++CRL EL N RI+V ASK+LANI Y+YR GLS+GTM+AGWD+ GP LYYVD +G
Sbjct: 158 LGMECRLWELRNGSRITVAAASKILANITYAYRNHGLSMGTMLAGWDQFGPSLYYVDDKG 217
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+K FSVGSGS YAYGVLD+GY+ D+S+E+A +LARR+I+HAT+RD ASGG+ +VY+
Sbjct: 218 SRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYH 277
Query: 234 VGPNGWKKLSGDDVGELHYHYYP 256
V GW K+S DD +L+ Y+P
Sbjct: 278 VHEKGWTKISRDDQTKLYDRYFP 300
>gi|297684734|ref|XP_002819976.1| PREDICTED: proteasome subunit beta type-5-like [Pongo abelii]
Length = 270
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 166/217 (76%), Gaps = 7/217 (3%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC F
Sbjct: 54 IKMLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSF 113
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP----- 164
W R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GP
Sbjct: 114 WERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPVGWAT 173
Query: 165 --GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +++ +LA RAIY AT+RD
Sbjct: 174 WQGLYYVDSEGNRISGATFSVGSGSVYAYGVMDWGYSYDLEVDQPYDLAPRAIYQATYRD 233
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
A SGG ++Y+V +GW ++S D+V +LH Y TP
Sbjct: 234 AYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP 270
>gi|299752963|ref|XP_002911819.1| proteasome component pts1 [Coprinopsis cinerea okayama7#130]
gi|298410081|gb|EFI28325.1| proteasome component pts1 [Coprinopsis cinerea okayama7#130]
Length = 313
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/231 (58%), Positives = 171/231 (74%), Gaps = 7/231 (3%)
Query: 29 PSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
P+F++P D F + D +K GTTTLAF F+ GV+VA DSRA+ G YI
Sbjct: 50 PTFTVPALPDPTAFLRLHTDDHADPSCRIKIQHGTTTLAFRFQGGVIVAVDSRATAGSYI 109
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S +VKK+IEINPY+LGTMAGGAADCQ+W LG+ CRLHEL NK RISV+ ASK L+N+
Sbjct: 110 ASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMHCRLHELRNKERISVSAASKFLSNL 169
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+YSY+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD GY++D
Sbjct: 170 VYSYKGMGLSMGTMICGWDKTGPAIFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWD 229
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
++ EA EL RR+IY A RDA SG ++Y+V +GW+ + DV +LHY
Sbjct: 230 LTDAEAQELGRRSIYAAGHRDAFSGNSVNLYHVKEHGWEFIGNYDVNKLHY 280
>gi|403413320|emb|CCM00020.1| predicted protein [Fibroporia radiculosa]
Length = 302
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/230 (58%), Positives = 170/230 (73%), Gaps = 7/230 (3%)
Query: 29 PSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
P+F++P D F + D +K GTTTLAF +K GV+VA DSRA+ G Y+
Sbjct: 47 PTFAIPSVPDPAAFLRLHTDDHADPSCRIKIKHGTTTLAFRYKGGVIVAVDSRATAGSYV 106
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S +VKK+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL N+ RISV ASK L+N+
Sbjct: 107 ASGTVKKVIEINPYLLGTMAGGAADCQYWETFLGIECRLHELRNRERISVAAASKFLSNL 166
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+YSY+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD GY +D
Sbjct: 167 VYSYKGMGLSMGTMICGWDKTGPTIFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYHWD 226
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
++ EEA EL RR+IY A RDA SG ++Y+V +GWK + DV E+H
Sbjct: 227 LTDEEALELGRRSIYAAGHRDAFSGNTINLYHVQEDGWKFIGNYDVSEMH 276
>gi|259089301|ref|NP_001158688.1| Proteasome subunit beta type 8 [Oncorhynchus mykiss]
gi|225705888|gb|ACO08790.1| Proteasome subunit beta type 8 precursor [Oncorhynchus mykiss]
Length = 276
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/236 (55%), Positives = 174/236 (73%), Gaps = 12/236 (5%)
Query: 29 PSFSLPLSTDFDEFQKD----------TKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
P ++P+ D EF + K L+H GTTTLAF F+ GVMVA DSRAS G
Sbjct: 38 PELAVPVGVDPAEFLRPLVDSEEGVDGVKINLEH--GTTTLAFKFQHGVMVAVDSRASAG 95
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
Y+S+Q KK+IEINP++LGTM+G AADC +W R L +CR+++L NK RISV+ ASKLL
Sbjct: 96 SYVSTQMFKKVIEINPFLLGTMSGSAADCVYWERVLAKECRIYKLRNKERISVSAASKLL 155
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
AN++ +YRGMGLS+GTMI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY
Sbjct: 156 ANMVVNYRGMGLSMGTMICGWDKKGPGLYYVDDNGLRLCGNMFSTGSGNTYAYGVMDSGY 215
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
++D+S+ EA +LA+RAI+HAT RDA SGG ++Y++ GW K+S +DVG+L++ +
Sbjct: 216 RYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNMYHMRETGWIKVSQEDVGDLYHRF 271
>gi|401420044|ref|XP_003874511.1| putative proteasome beta 5 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490747|emb|CBZ26011.1| putative proteasome beta 5 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 302
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 162/203 (79%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTTLAF F G++VA DSRAS G YI+SQ+V K++EIN Y+LGT+AGGAADCQ+W R
Sbjct: 98 KGTTTLAFRFNGGIIVAVDSRASTGQYIASQTVLKVLEINDYLLGTLAGGAADCQYWERV 157
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
LG++CRL EL N RI+V ASK+LANI Y+YR GLS+GTM+AGWD GP LYYVD +G
Sbjct: 158 LGMECRLWELRNGSRITVAAASKILANITYAYRNHGLSMGTMLAGWDRFGPSLYYVDDKG 217
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+K FSVGSGS YAYGVLD+GY+ D+S+E+A +LARR+I+HAT+RD ASGG+ +VY+
Sbjct: 218 SRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYH 277
Query: 234 VGPNGWKKLSGDDVGELHYHYYP 256
V GW K+S DD +L+ Y+P
Sbjct: 278 VHEKGWTKISRDDQTKLYDRYFP 300
>gi|392573954|gb|EIW67092.1| hypothetical protein TREMEDRAFT_34309 [Tremella mesenterica DSM
1558]
Length = 287
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/226 (60%), Positives = 168/226 (74%), Gaps = 2/226 (0%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
P+ L L TD + +A +K A GTTTLAF FK G++VA DSRA+ G YI+S +VKK
Sbjct: 45 PTAFLNLYTD--SMSSNPEAKIKLAHGTTTLAFRFKGGIIVAVDSRATAGSYIASGTVKK 102
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEINPY+LGTMAGGAADCQ+W LG++CRL+EL NK RISV ASK+L+NI+Y Y+G
Sbjct: 103 VIEINPYLLGTMAGGAADCQYWETYLGMRCRLYELRNKERISVAAASKILSNIVYGYKGR 162
Query: 149 GLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAA 208
GLS+GTMI GWD+TGP L+YVDSEG RLKG FSVGSGS +AYGVLD GY +D+S EEA
Sbjct: 163 GLSMGTMICGWDKTGPALFYVDSEGQRLKGDLFSVGSGSTFAYGVLDQGYSYDLSDEEAQ 222
Query: 209 ELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EL RR+I A RDA SG ++Y+V NGW+ + DV + Y Y
Sbjct: 223 ELGRRSIIAAGHRDAFSGNTCNLYHVRENGWEFIGNYDVSQQWYEY 268
>gi|302692828|ref|XP_003036093.1| hypothetical protein SCHCODRAFT_81440 [Schizophyllum commune H4-8]
gi|300109789|gb|EFJ01191.1| hypothetical protein SCHCODRAFT_81440 [Schizophyllum commune H4-8]
Length = 310
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/233 (57%), Positives = 171/233 (73%), Gaps = 7/233 (3%)
Query: 27 AAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
A P F++P D F + D +K GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 48 ALPQFAVPGVQDPSAFLRLHTDDHADPNCRIKIQHGTTTLAFRFQGGVIVAVDSRATAGS 107
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
Y++S +VKK+IEINPY+LGTMAGGAADCQ+W LG+ CRLHEL N+ RISV+ ASK L+
Sbjct: 108 YVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMHCRLHELRNRERISVSAASKYLS 167
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++YSY+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD GY+
Sbjct: 168 NLVYSYKGMGLSMGTMICGWDKTGPQIFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYR 227
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+D++ EA EL RR+IY A RDA SG ++Y+V NGW+ + D+ +LHY
Sbjct: 228 WDLTDAEAQELGRRSIYAAGHRDAFSGNTCNLYHVRENGWEFIGNYDLSKLHY 280
>gi|442749433|gb|JAA66876.1| Putative 20s proteasome regulatory subunit beta type [Ixodes
ricinus]
Length = 279
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 149/253 (58%), Positives = 182/253 (71%), Gaps = 3/253 (1%)
Query: 4 DTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLK--HAKGTTTLAF 61
D L+ FGS + C A P F+ P + + D+ +K + KGTTTL F
Sbjct: 21 DDQDLQRFDDAFGS-NLRCHTQLAQPPFADPNESMPALMKDDSGKQIKIHYDKGTTTLCF 79
Query: 62 IFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLH 121
+K GV+VAADSRA+ G YI SQSVKKII IN Y+LGTMAGGAADC +W R L +CR++
Sbjct: 80 KYKGGVIVAADSRATGGEYIGSQSVKKIIVINKYLLGTMAGGAADCVYWQRVLSERCRIY 139
Query: 122 ELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRF 181
EL N+ RISV ASKLLANILY+Y+GMGLS+G MI+GWD+ GPGLYYVD+EG RL G+ F
Sbjct: 140 ELRNRERISVAAASKLLANILYNYKGMGLSLGVMISGWDKRGPGLYYVDNEGNRLSGSMF 199
Query: 182 SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
S GSGS YA+GVLD+GYKFDM EA ELAR+AIYHATFRD+ASGG+ VY V GW+
Sbjct: 200 SSGSGSTYAFGVLDNGYKFDMEDGEAFELARKAIYHATFRDSASGGIVRVYRVTEAGWEC 259
Query: 242 LSGDDVGELHYHY 254
+S +D +LHY Y
Sbjct: 260 ISEEDCMDLHYKY 272
>gi|62955555|ref|NP_001017791.1| proteasome subunit beta type 8 [Danio rerio]
gi|62531305|gb|AAH92889.1| Zgc:110346 [Danio rerio]
gi|182890838|gb|AAI65541.1| Zgc:110346 [Danio rerio]
Length = 277
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 129/229 (56%), Positives = 169/229 (73%), Gaps = 5/229 (2%)
Query: 31 FSLPLSTDFDEF-----QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQS 85
++P D ++F + D+ ++ GTTTLAF F+ GVMVA DSRAS G YI ++
Sbjct: 43 LAVPTGMDPEQFLGPLTEGDSDIKIEFLHGTTTLAFKFQHGVMVAVDSRASAGSYIDTKD 102
Query: 86 VKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSY 145
KK+IEINPY+LGTM+G AADC +W R L +CR+++L NK RISV ASKLLAN++ Y
Sbjct: 103 FKKVIEINPYLLGTMSGNAADCVYWERRLAKECRIYKLRNKTRISVAAASKLLANMVAEY 162
Query: 146 RGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
RGMGLS+GTM+ GWD+ GPGLYYV S G RL G FS GSG YAYGV+DSG+++D+++
Sbjct: 163 RGMGLSMGTMVCGWDQRGPGLYYVSSSGTRLAGDMFSTGSGCNYAYGVMDSGHRWDLTVP 222
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EA +LA RAIYHAT RDA SGGV ++Y++ GW K+S +DVG+LH+ Y
Sbjct: 223 EAYDLAERAIYHATHRDAYSGGVVNMYHMQKEGWIKVSQNDVGDLHHKY 271
>gi|390190132|dbj|BAM21000.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 164/217 (75%), Gaps = 1/217 (0%)
Query: 39 FDEFQKDTKATLKHAK-GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYML 97
F + + + H GTTTLAF F+ GV+VA DSRAS G YI+S+ K+IEINPY+L
Sbjct: 5 FKSYSDGERGLMIHLNHGTTTLAFKFQHGVIVAVDSRASAGNYIASKEANKVIEINPYLL 64
Query: 98 GTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIA 157
GTM+G AADCQ+W R L +CRL++L NK RISV+ ASKLL+N++ YRGMGLS+G+MI
Sbjct: 65 GTMSGSAADCQYWERLLAKECRLYKLRNKERISVSAASKLLSNMMCQYRGMGLSMGSMIC 124
Query: 158 GWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYH 217
GWD+ GPGLYYVD +G RL G FS G G+ YAYGV+DSGY++D+S+EEA +L RRAI H
Sbjct: 125 GWDKKGPGLYYVDDDGTRLSGNLFSTGCGNSYAYGVVDSGYRYDLSVEEAYDLGRRAIAH 184
Query: 218 ATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
AT RDA SGGV ++Y++ NGW K+S DDV EL + Y
Sbjct: 185 ATHRDAYSGGVVNMYHMKENGWIKVSKDDVAELIHQY 221
>gi|242001650|ref|XP_002435468.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
gi|215498804|gb|EEC08298.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
Length = 279
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/253 (58%), Positives = 182/253 (71%), Gaps = 3/253 (1%)
Query: 4 DTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLK--HAKGTTTLAF 61
D L+ FGS + C A P F+ P + + D+ +K + KGTTTL F
Sbjct: 21 DDQDLQRFDDAFGS-NLRCHTQLAQPPFADPNESMPALMKDDSGKQIKIHYDKGTTTLCF 79
Query: 62 IFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLH 121
+K GV+VAADSRA+ G YI SQSVKKII IN Y+LGTMAGGAADC +W R L +CR++
Sbjct: 80 KYKGGVVVAADSRATGGEYIGSQSVKKIIVINKYLLGTMAGGAADCVYWQRVLSERCRIY 139
Query: 122 ELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRF 181
EL N+ RISV ASKLLANILY+Y+GMGLS+G MI+GWD+ GPGLYYVD+EG RL G+ F
Sbjct: 140 ELRNRERISVAAASKLLANILYNYKGMGLSLGVMISGWDKRGPGLYYVDNEGNRLSGSMF 199
Query: 182 SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
S GSGS YA+GVLD+GYKFDM EA ELAR+AIYHATFRD+ASGG+ VY V GW+
Sbjct: 200 SSGSGSTYAFGVLDNGYKFDMEDGEAFELARKAIYHATFRDSASGGIVRVYRVTEAGWEC 259
Query: 242 LSGDDVGELHYHY 254
+S +D +LHY Y
Sbjct: 260 ISEEDCMDLHYKY 272
>gi|389609369|dbj|BAM18296.1| proteasome beta5 subunit [Papilio xuthus]
Length = 283
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 171/233 (73%), Gaps = 7/233 (3%)
Query: 27 AAPSFSLPLST-----DFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
A P F+ P+ T DE +D K H GTTTL F +K GV++A DSRA+ G +I
Sbjct: 42 ATPPFANPVETLAQFNSKDETGRDIKIEFDH--GTTTLGFRYKGGVLLAVDSRATGGQFI 99
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
SQ++KKI+EIN Y+LGT+AGGAADC +W R L +CRL+EL N+ RISV ASKL+AN+
Sbjct: 100 GSQTMKKIVEINDYLLGTLAGGAADCVYWDRVLAKQCRLYELRNRERISVAAASKLMANM 159
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y+Y+GMGLS+G M+AG+D+ G LYYVDSEG R GT FSVGSGS YA+GVLDSGYK+D
Sbjct: 160 VYNYKGMGLSMGMMLAGFDKRGAQLYYVDSEGTRTPGTVFSVGSGSVYAFGVLDSGYKWD 219
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+ +EA EL RRAIYHAT RDA SGG+ VY++ NGW +S +D +LHY Y
Sbjct: 220 LEDKEAQELGRRAIYHATHRDAYSGGIIRVYHISENGWVNISNEDCSDLHYKY 272
>gi|426376393|ref|XP_004054985.1| PREDICTED: proteasome subunit beta type-5 isoform 6 [Gorilla
gorilla gorilla]
Length = 275
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 157/192 (81%)
Query: 63 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 122
F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++E
Sbjct: 79 FRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYE 138
Query: 123 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS 182
L NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FS
Sbjct: 139 LRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFS 198
Query: 183 VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKL 242
VGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT+RDA SGG ++Y+V +GW ++
Sbjct: 199 VGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRV 258
Query: 243 SGDDVGELHYHY 254
S D+V +LH Y
Sbjct: 259 SSDNVADLHEKY 270
>gi|195431433|ref|XP_002063746.1| GK15836 [Drosophila willistoni]
gi|194159831|gb|EDW74732.1| GK15836 [Drosophila willistoni]
Length = 283
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 132/235 (56%), Positives = 169/235 (71%), Gaps = 4/235 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F P+ + ++ Q + T + GTTTL F ++ GV++A DSRA+ G
Sbjct: 39 PYTLAAPPFENPMH-NLNQIQANADKTGIKIDFDHGTTTLGFKYQGGVILAVDSRATGGQ 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQ++KK++EIN ++LGT+AGGAADC +W R L +CR+HEL NK RISV ASK++A
Sbjct: 98 YIGSQTMKKVVEINQFLLGTLAGGAADCVYWDRVLAKECRMHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+ MGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS YAYGVLDSGY
Sbjct: 158 NIAHEYKNMGLSMGMMLAGYDKRGPGLYYVDSEGSRTAGNLFSVGSGSLYAYGVLDSGYH 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+++ EEA EL RR+IYHATFRDA SGG+ VY++ P GW +S D ELHY Y
Sbjct: 218 WNLKDEEAQELGRRSIYHATFRDAYSGGIIRVYHMTPTGWINISNTDCMELHYKY 272
>gi|170088512|ref|XP_001875479.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164650679|gb|EDR14920.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 307
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 169/231 (73%), Gaps = 7/231 (3%)
Query: 29 PSFSLPLSTDFDEF-------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
P+FS+P D F D +K GTTTLAF F+ GV+VA DSRA+ G Y+
Sbjct: 42 PTFSIPDVADPTSFLQLHTDDHADPNCRIKIQHGTTTLAFRFQGGVIVAVDSRATAGSYV 101
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S +VKK+IEINPY+LGTMAGGAADCQ+W LG+ CRLHEL N+ RISV+ ASK L+N+
Sbjct: 102 ASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMHCRLHELRNRERISVSAASKYLSNL 161
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+YSY+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD GY++D
Sbjct: 162 VYSYKGMGLSMGTMICGWDKTGPAVFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWD 221
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
++ EA EL RR+IY A RDA SG ++Y+V +GW + D+ +LHY
Sbjct: 222 LTDAEAQELGRRSIYAAGHRDAFSGNSCNLYHVKEDGWHFIGNYDISKLHY 272
>gi|409082095|gb|EKM82453.1| hypothetical protein AGABI1DRAFT_111072 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 311
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/235 (55%), Positives = 170/235 (72%), Gaps = 7/235 (2%)
Query: 25 LSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASM 77
+ P+F +P D F + D +K GTTTLAF FK GV+VA DSRA+
Sbjct: 46 IKGIPAFKVPAVADPTAFLRLHTDDHADPNCRIKIQHGTTTLAFRFKGGVIVAVDSRATA 105
Query: 78 GGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKL 137
G Y++S +VKK+IEINPY+LGTMAGGAADCQFW LG+ CRLHEL N+ RISV+ ASK
Sbjct: 106 GSYVASGTVKKVIEINPYLLGTMAGGAADCQFWETYLGMHCRLHELRNRERISVSAASKY 165
Query: 138 LANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSG 197
L+N++YSY+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD G
Sbjct: 166 LSNLVYSYKGMGLSMGTMICGWDKTGPAVFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQG 225
Query: 198 YKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
Y++D++ EEA EL RR+I+ A RDA SG ++Y+V GW + D+ +++Y
Sbjct: 226 YRWDLTDEEAQELGRRSIFAAGHRDAMSGNTCNLYHVKEEGWDFIGNYDISKMYY 280
>gi|195122572|ref|XP_002005785.1| GI18886 [Drosophila mojavensis]
gi|193910853|gb|EDW09720.1| GI18886 [Drosophila mojavensis]
Length = 279
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 137/235 (58%), Positives = 169/235 (71%), Gaps = 4/235 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F PL + ++ Q + T + GTTTL F ++ GV++A DSRA+ G
Sbjct: 39 PYTLAAPPFENPLE-NLNKIQANGDKTGIKINFDHGTTTLGFKYQGGVILAVDSRATGGQ 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQS+KKI+EIN ++LGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQSMKKIVEINQFLLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS YA+GVLDSGY
Sbjct: 158 NIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNVFSVGSGSIYAFGVLDSGYH 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+D+ A EL RRAIYHATFRDA SGG+ VY++ NGW K+S D ELHY Y
Sbjct: 218 WDLEDAAAQELGRRAIYHATFRDAYSGGIIRVYHMTKNGWIKISETDCMELHYKY 272
>gi|195027377|ref|XP_001986559.1| GH20460 [Drosophila grimshawi]
gi|193902559|gb|EDW01426.1| GH20460 [Drosophila grimshawi]
Length = 280
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 135/232 (58%), Positives = 169/232 (72%), Gaps = 4/232 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F PL + ++ Q + T + GTTTL F ++ GV++A DSRA+ G
Sbjct: 39 PYTLAAPPFENPLD-NLNKIQANAAKTGVKINFDHGTTTLGFKYQGGVILAVDSRATGGQ 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQ++KKI+EIN ++LGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQTMKKIVEINQFLLGTLAGGAADCVYWDRVLAKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS +A+GVLDSGY
Sbjct: 158 NIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNVFSVGSGSIFAFGVLDSGYH 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
+D+ EA EL RRAIYHATFRDA SGG+ VY++ PNGW K+S D ELH
Sbjct: 218 WDLKDTEAQELGRRAIYHATFRDAYSGGIVRVYHMTPNGWIKISDTDCMELH 269
>gi|221220708|gb|ACM09015.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 162/211 (76%), Gaps = 3/211 (1%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
D K H GTTTLAF F+ GV+VA DSRA+ YI+SQ+VKK+IEINPY+LGTMAGGA
Sbjct: 57 DRKIEFLH--GTTTLAFKFQHGVIVAVDSRATASSYIASQTVKKVIEINPYLLGTMAGGA 114
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADC FW R L +C ++EL NK RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+TGP
Sbjct: 115 ADCSFWERLLARQCHVYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKTGP 174
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF-DMSIEEAAELARRAIYHATFRDA 223
GLYYVDSEG R+ G F+VGSGS YAYG++DSG K D+++EEA +L RRAIY AT+RDA
Sbjct: 175 GLYYVDSEGNRVCGDLFAVGSGSMYAYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDA 234
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGG ++Y+V GW ++S DV LH Y
Sbjct: 235 YSGGQVNLYHVHSEGWTRVSQSDVLMLHQQY 265
>gi|426199921|gb|EKV49845.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 311
Score = 272 bits (696), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 131/235 (55%), Positives = 170/235 (72%), Gaps = 7/235 (2%)
Query: 25 LSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASM 77
+ P+F +P D F + D +K GTTTLAF FK GV+VA DSRA+
Sbjct: 46 IKGIPAFKVPAVADPTAFLRLHTDDHADPNCRIKIQHGTTTLAFRFKGGVIVAVDSRATA 105
Query: 78 GGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKL 137
G Y++S +VKK+IEINPY+LGTMAGGAADCQFW LG+ CRLHEL N+ RISV+ ASK
Sbjct: 106 GSYVASGTVKKVIEINPYLLGTMAGGAADCQFWETYLGMHCRLHELRNRERISVSAASKY 165
Query: 138 LANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSG 197
L+N++YSY+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD G
Sbjct: 166 LSNLVYSYKGMGLSMGTMICGWDKTGPAVFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQG 225
Query: 198 YKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
Y++D++ EEA EL RR+I+ A RDA SG ++Y+V GW + D+ +++Y
Sbjct: 226 YRWDLTDEEAQELGRRSIFAAGHRDAMSGNTCNLYHVKEEGWDFIGNYDISKMYY 280
>gi|405121321|gb|AFR96090.1| proteasome component pts1 [Cryptococcus neoformans var. grubii H99]
Length = 332
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/232 (56%), Positives = 168/232 (72%), Gaps = 3/232 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P + SF L D + +A +K A GTTTLAF FK G++VA DSRA+ G Y++
Sbjct: 84 PRVHDPTSF---LDMHTDSMSANPEAKIKIAHGTTTLAFRFKGGIIVAVDSRATAGSYVA 140
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
S +VKK+IEIN ++LGTMAGGAADCQ+W LG++CRLHEL NK RISV ASK+L+NI+
Sbjct: 141 SGTVKKVIEINKFLLGTMAGGAADCQYWETYLGMQCRLHELRNKERISVAAASKILSNIV 200
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y Y+GMGLS+GTM+ GWD+TGP ++YVD +G RLKG FSVGSGS +AYGVLD GYK+D+
Sbjct: 201 YQYKGMGLSMGTMVCGWDKTGPCIFYVDDDGQRLKGDLFSVGSGSTFAYGVLDQGYKWDL 260
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
S EEA EL RR+I A RDA SG ++Y+V GW+ + D+ EL Y Y
Sbjct: 261 SDEEAQELGRRSIVAAGHRDAYSGNTCNLYHVRQEGWEFIGNYDINELWYEY 312
>gi|388582767|gb|EIM23071.1| 20S proteasome subunit, partial [Wallemia sebi CBS 633.66]
Length = 288
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/236 (57%), Positives = 166/236 (70%), Gaps = 7/236 (2%)
Query: 24 ELSAAPSFSLPLSTD-------FDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRAS 76
E P+ LP + D + + Q+D +K GTTTLAF FK GV+VA DSRA+
Sbjct: 25 EKHGIPTLDLPNTADPTGFLRTYTDDQQDPSCRIKINHGTTTLAFKFKGGVIVAVDSRAT 84
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
G Y++S +VKK+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL NK RISV ASK
Sbjct: 85 AGSYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAASK 144
Query: 137 LLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDS 196
L+NI YSY+G GLS+GTMI GWD+ GP ++YVDS+G R G FSVGSGS +AYGVLD
Sbjct: 145 YLSNITYSYKGKGLSMGTMICGWDKGGPAIWYVDSDGSRTSGNVFSVGSGSTFAYGVLDQ 204
Query: 197 GYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
GYK+D+S +EA EL RR+IY A RDA SG ++Y V +GW D+ ELHY
Sbjct: 205 GYKYDLSDDEALELGRRSIYAAGHRDAYSGNTINLYIVKESGWTHKGTIDISELHY 260
>gi|58268812|ref|XP_571562.1| proteasome component pts1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134113116|ref|XP_774834.1| hypothetical protein CNBF2630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257480|gb|EAL20187.1| hypothetical protein CNBF2630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227797|gb|AAW44255.1| proteasome component pts1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 301
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/232 (56%), Positives = 168/232 (72%), Gaps = 3/232 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P + SF L D + +A +K A GTTTLAF FK G++VA DSRA+ G Y++
Sbjct: 53 PRVHDPTSF---LDIHTDSMSANPEAKIKIAHGTTTLAFRFKGGIIVAVDSRATAGSYVA 109
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
S +VKK+IEIN ++LGTMAGGAADCQ+W LG++CRLHEL NK RISV ASK+L+NI+
Sbjct: 110 SGTVKKVIEINKFLLGTMAGGAADCQYWETYLGMQCRLHELRNKERISVAAASKILSNIV 169
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y Y+GMGLS+GTM+ GWD+TGP ++YVD +G RLKG FSVGSGS +AYGVLD GYK+D+
Sbjct: 170 YQYKGMGLSMGTMVCGWDKTGPCIFYVDDDGQRLKGDLFSVGSGSTFAYGVLDQGYKWDL 229
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
S EEA EL RR+I A RDA SG ++Y+V GW+ + D+ EL Y Y
Sbjct: 230 SDEEAQELGRRSIVAAGHRDAFSGNTCNLYHVRQEGWEFIGNYDINELWYEY 281
>gi|321260090|ref|XP_003194765.1| proteasome component [Cryptococcus gattii WM276]
gi|317461237|gb|ADV22978.1| Proteasome component, putative [Cryptococcus gattii WM276]
Length = 301
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/232 (56%), Positives = 168/232 (72%), Gaps = 3/232 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P + SF L D + +A +K A GTTTLAF FK G++VA DSRA+ G Y++
Sbjct: 53 PRVHDPTSF---LDMHTDSMSANPEAKIKIAHGTTTLAFRFKGGIIVAVDSRATAGSYVA 109
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
S +VKK+IEIN ++LGTMAGGAADCQ+W LG++CRLHEL NK RISV ASK+L+NI+
Sbjct: 110 SGTVKKVIEINKFLLGTMAGGAADCQYWETYLGMQCRLHELRNKERISVAAASKILSNIV 169
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y Y+GMGLS+GTM+ GWD+TGP ++YVD +G RLKG FSVGSGS +AYGVLD GYK+D+
Sbjct: 170 YQYKGMGLSMGTMVCGWDKTGPCIFYVDDDGQRLKGDLFSVGSGSTFAYGVLDQGYKWDL 229
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
S EEA EL RR+I A RDA SG ++Y+V GW+ + D+ EL Y Y
Sbjct: 230 SDEEAQELGRRSIVAAGHRDAYSGNTCNLYHVRQEGWEFIGNYDINELWYEY 281
>gi|71747590|ref|XP_822850.1| proteasome subunit beta 5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|10185394|emb|CAC08538.1| proteasome PRCE (beta-5) subunit precursor [Trypanosoma brucei]
gi|70832518|gb|EAN78022.1| proteasome beta 5 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332661|emb|CBH15656.1| proteasome beta 5 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 310
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 160/205 (78%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L KGTTTL F F G+++A DSRAS G YISSQ+V K++EIN Y+LGTMAGGAADCQ+
Sbjct: 101 LDMKKGTTTLGFHFDGGIIIAVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQY 160
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R LG++CRL EL N RISV ASK+LANI Y YR GLS+GTM+AGWD+ GP LYYV
Sbjct: 161 WERVLGMECRLWELRNNCRISVAAASKILANITYQYRNHGLSMGTMVAGWDQFGPSLYYV 220
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D +G R+K FSVGSGS YAYGVLD GY+ ++++EEA +LARR+I+HAT+RD ASGG+
Sbjct: 221 DDKGTRVKHEIFSVGSGSIYAYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIV 280
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHY 254
+VY+V P GW ++S DD +L+ Y
Sbjct: 281 TVYHVHPKGWTQISRDDQTKLYDRY 305
>gi|323450997|gb|EGB06876.1| hypothetical protein AURANDRAFT_28593 [Aureococcus anophagefferens]
Length = 287
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/232 (56%), Positives = 168/232 (72%), Gaps = 7/232 (3%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P +A +F + TD + +K AKGTTTLAF F GV+++ DSR++MG YI+
Sbjct: 42 PAAYSAQNFGVGYGTDHHQ-------DVKFAKGTTTLAFKFNGGVIISVDSRSTMGPYIA 94
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ+VKK+IEINP++LGTMAGGAADC FW RNLG +CR+ EL NKRR+SV ASK+LAN +
Sbjct: 95 SQTVKKVIEINPFLLGTMAGGAADCSFWERNLGTQCRMFELRNKRRVSVAAASKMLANTM 154
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YSYRG GLS+GTM+ GWDETGP LYYVD +G RL G F VGSGS YAYGV+DS + D+
Sbjct: 155 YSYRGRGLSMGTMVCGWDETGPQLYYVDDDGTRLHGNVFCVGSGSTYAYGVIDSNLRDDL 214
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
++ EA +L RRAI A RDA SGG ++Y++ GW+ + D +L+YHY
Sbjct: 215 TVPEAIDLGRRAIAGAAHRDAYSGGWNNLYHMKETGWEFIGAVDTNDLYYHY 266
>gi|393236606|gb|EJD44154.1| proteasome-domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 327
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/247 (56%), Positives = 178/247 (72%), Gaps = 16/247 (6%)
Query: 19 DELCPELSAA---PSFSLP----------LSTDFDEFQKDTKATLKHAKGTTTLAFIFKE 65
+EL LS A PSF+LP + TD D D K ++H GTTTLAF F+
Sbjct: 41 EELWGSLSGARAGPSFALPSVANPAAFLRMHTD-DHADPDCKIKIQH--GTTTLAFRFQG 97
Query: 66 GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELAN 125
GV+VA DSRA+ G YI+S +VKK+IEIN ++LGTMAGGAADCQ+W LGI+CRLHEL N
Sbjct: 98 GVIVAVDSRATAGSYIASGTVKKVIEINKFLLGTMAGGAADCQYWETYLGIQCRLHELRN 157
Query: 126 KRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGS 185
RISV ASK L+N++Y Y+GMGLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGS
Sbjct: 158 GERISVAAASKYLSNLVYGYKGMGLSMGTMICGWDKTGPAVFYVDSDGTRLKGDVFSVGS 217
Query: 186 GSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGD 245
GS +AYGVLD GY++D++ EA EL RR+IY A RDA SG ++Y+V NGW+ ++
Sbjct: 218 GSTFAYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRDAFSGNTINLYHVRENGWEFIANY 277
Query: 246 DVGELHY 252
DV ++HY
Sbjct: 278 DVTKMHY 284
>gi|194758026|ref|XP_001961263.1| GF13778 [Drosophila ananassae]
gi|190622561|gb|EDV38085.1| GF13778 [Drosophila ananassae]
Length = 284
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/235 (57%), Positives = 169/235 (71%), Gaps = 4/235 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F P+ + + Q + T + GTTTL F +K GV++A DSRA+ G
Sbjct: 39 PYTLAAPPFENPMH-NLNLIQANADKTGIKIDFDHGTTTLGFKYKGGVILAVDSRATGGQ 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQ++KKI+EIN ++LGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQTMKKIVEINQFLLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS +AYGVLDSGY
Sbjct: 158 NIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFSVGSGSLFAYGVLDSGYH 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+D+ + A EL RRAIYHATFRDA SGG+ VY++ P GW K+S D ELHY Y
Sbjct: 218 WDLEDDVAQELGRRAIYHATFRDAYSGGIIRVYHMTPTGWIKISETDCMELHYKY 272
>gi|7141312|gb|AAF37285.1|AF226674_1 20S proteasome beta 5 subunit [Trypanosoma brucei]
Length = 250
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 160/205 (78%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L KGTTTL F F G+++A DSRAS G YISSQ+V K++EIN Y+LGTMAGGAADCQ+
Sbjct: 41 LDMKKGTTTLGFHFDGGIIIAVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQY 100
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R LG++CRL EL N RISV ASK+LANI Y YR GLS+GTM+AGWD+ GP LYYV
Sbjct: 101 WERVLGMECRLWELRNNCRISVAAASKILANITYQYRNHGLSMGTMVAGWDQFGPSLYYV 160
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D +G R+K FSVGSGS YAYGVLD GY+ ++++EEA +LARR+I+HAT+RD ASGG+
Sbjct: 161 DDKGTRVKHEIFSVGSGSIYAYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIV 220
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHY 254
+VY+V P GW ++S DD +L+ Y
Sbjct: 221 TVYHVHPKGWTQISRDDQTKLYDRY 245
>gi|2851557|sp|P34065.2|PSB5_CHICK RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain chain 1; AltName: Full=Multicatalytic
endopeptidase complex chain 1; AltName: Full=Proteasome
chain 1; AltName: Full=Proteasome subunit C1; Flags:
Precursor
gi|1906303|dbj|BAA19471.1| proteasome C1 subunit [Gallus gallus]
Length = 256
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 159/205 (77%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L+ GTTTLAF F GV+VA DSRA+ G YI+SQ+V+K+IEINP +LGTMAGGAADC F
Sbjct: 50 LQLLHGTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCSF 109
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R L +CR++EL NK ISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYV
Sbjct: 110 WERLLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYV 169
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
DSEG R+ G F+VGSGS YAYGVLD G + DM+ +EA ELARRAI+ A RDA SGG
Sbjct: 170 DSEGTRIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSV 229
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHY 254
+VY+VGP GW+++S DV LH Y
Sbjct: 230 TVYHVGPRGWRRVSSHDVAGLHDGY 254
>gi|51340809|gb|AAC97957.2| proteasome beta 5 subunit [Trypanosoma cruzi]
Length = 261
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 160/205 (78%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L KGTTTL F F G+++A DSRAS G YISSQ+V K++EIN Y+LGTMAGGAADCQ+
Sbjct: 55 LDMKKGTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQY 114
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R LG++CRL EL N RISV ASK+LANI YSYR GLS+GTM+AGWD+ GP LYYV
Sbjct: 115 WERVLGMECRLWELRNNCRISVAAASKILANITYSYRNYGLSMGTMVAGWDQFGPSLYYV 174
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D +G R+K FSVGSGS YAYGVLD GY+ ++++EEA ELARR+I+HAT+RD ASGG+
Sbjct: 175 DDKGTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIV 234
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHY 254
+VY+V GW ++S DD +L+ Y
Sbjct: 235 TVYHVHQGGWTQISRDDQTKLYDRY 259
>gi|125811046|ref|XP_001361733.1| GA11556 [Drosophila pseudoobscura pseudoobscura]
gi|54636909|gb|EAL26312.1| GA11556 [Drosophila pseudoobscura pseudoobscura]
Length = 279
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/235 (56%), Positives = 172/235 (73%), Gaps = 4/235 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F P+ + ++ Q ++ T + GTTTL F ++ GV++A DSRA+ G
Sbjct: 39 PYTLAAPPFENPM-LNLNQIQANSGKTGIKIDFDHGTTTLGFKYQGGVILAVDSRATGGQ 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQ++KKI+EIN ++LGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQTMKKIVEINDFLLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
NI + Y+GMGLS+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS +AYGVLDSGY+
Sbjct: 158 NIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFSVGSGSLFAYGVLDSGYR 217
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+D+ +EA +L +RAIYHATFRDA SGG+ VY++ P GW +S D ELHY +
Sbjct: 218 WDLQDKEAQDLGQRAIYHATFRDAYSGGIIRVYHMTPTGWINVSNTDCMELHYKF 272
>gi|71416085|ref|XP_810086.1| proteasome beta 5 subunit [Trypanosoma cruzi strain CL Brener]
gi|70874567|gb|EAN88235.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/205 (63%), Positives = 160/205 (78%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L KGTTTL F F G+++A DSRAS G YISSQ+V KI+EIN Y+LGTMAGGAADCQ+
Sbjct: 105 LDMKKGTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKILEINEYLLGTMAGGAADCQY 164
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R LG++CRL EL N RISV ASK+LANI YSYR GLS+GTM+AGWD+ GP LYYV
Sbjct: 165 WERVLGMECRLWELRNNCRISVAAASKILANITYSYRNYGLSMGTMVAGWDQFGPSLYYV 224
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D +G R+K FSVGSGS YAYGVLD GY+ ++++EEA ELARR+I+HAT+RD ASGG+
Sbjct: 225 DDKGTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIV 284
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHY 254
+VY+V GW ++S DD +L+ Y
Sbjct: 285 TVYHVHQGGWTQISRDDQTKLYDRY 309
>gi|71418280|ref|XP_810804.1| proteasome beta 5 subunit [Trypanosoma cruzi strain CL Brener]
gi|70875393|gb|EAN88953.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 160/205 (78%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L KGTTTL F F G+++A DSRAS G YISSQ+V K++EIN Y+LGTMAGGAADCQ+
Sbjct: 105 LDMKKGTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQY 164
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R LG++CRL EL N RISV ASK+LANI YSYR GLS+GTM+AGWD+ GP LYYV
Sbjct: 165 WERVLGMECRLWELRNNCRISVAAASKILANITYSYRNYGLSMGTMVAGWDQFGPSLYYV 224
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D +G R+K FSVGSGS YAYGVLD GY+ ++++EEA ELARR+I+HAT+RD ASGG+
Sbjct: 225 DDKGTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIV 284
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHY 254
+VY+V GW ++S DD +L+ Y
Sbjct: 285 TVYHVHQGGWTQISRDDQTKLYDRY 309
>gi|113196863|gb|ABI31729.1| low molecular mass protein 7 [Sus scrofa]
Length = 249
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 168/233 (72%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 12 SPELALPRGMQPTEFLRSLGGDGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 71
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 72 ATLRVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNM 131
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSG+++D
Sbjct: 132 MYQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYD 191
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+SIEEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 192 LSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQY 244
>gi|62972|emb|CAA40494.1| proteasome C1 subunit [Gallus gallus]
Length = 204
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/200 (65%), Positives = 157/200 (78%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F GV+VA DSRA+ G YI+SQ+V+K+IEINP +LGTMAGGAADC FW R L
Sbjct: 3 GTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERLL 62
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK ISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 63 ARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGT 122
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G F+VGSGS YAYGVLD G + DM+ +EA ELARRAI+ A RDA SGG +VY+V
Sbjct: 123 RIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHV 182
Query: 235 GPNGWKKLSGDDVGELHYHY 254
GP GW+++S DV LH Y
Sbjct: 183 GPRGWRRVSSHDVAGLHDGY 202
>gi|407849166|gb|EKG04000.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 160/205 (78%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L KGTTTL F F G+++A DSRAS G YISSQ+V K++EIN Y+LGTMAGGAADCQ+
Sbjct: 105 LDMKKGTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQY 164
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R LG++CRL EL N RISV ASK+LANI YSYR GLS+GTM+AGWD+ GP LYYV
Sbjct: 165 WERVLGMECRLWELRNNCRISVAAASKILANITYSYRNYGLSMGTMVAGWDQFGPSLYYV 224
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D +G R+K FSVGSGS YAYGVLD GY+ ++++EEA ELARR+I+HAT+RD ASGG+
Sbjct: 225 DDKGTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIV 284
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHY 254
+VY+V GW ++S DD +L+ Y
Sbjct: 285 TVYHVHQGGWTQISRDDQTKLYDRY 309
>gi|311260174|ref|XP_001924154.2| PREDICTED: proteasome subunit beta type-8 [Sus scrofa]
gi|147225184|emb|CAN13316.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 276
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 168/233 (72%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFLRSLGGDGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLRVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSG+++D
Sbjct: 159 MYQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+SIEEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQY 271
>gi|407409749|gb|EKF32460.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 311
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 160/205 (78%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L KGTTTL F F G+++A DSRAS G YISSQ+V K++EIN Y+LGTMAGGAADCQ+
Sbjct: 105 LDMKKGTTTLGFHFDGGIIIAVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQY 164
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R LG++CRL EL N RISV ASK+LANI YSYR GLS+GTM+AGWD+ GP LYYV
Sbjct: 165 WERVLGMECRLWELRNNCRISVAAASKILANITYSYRNYGLSMGTMVAGWDQFGPSLYYV 224
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D +G R+K FSVGSGS YAYGVLD GY+ ++++EEA ELARR+I+HAT+RD ASGG+
Sbjct: 225 DDKGTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIV 284
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHY 254
+VY+V GW ++S DD +L+ Y
Sbjct: 285 TVYHVHQGGWTQVSRDDQTKLYDRY 309
>gi|2654058|gb|AAB87679.1| LMP7 [Danio rerio]
gi|29561859|emb|CAD87792.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Danio rerio]
gi|94732364|emb|CAK04955.1| proteasome (prosome, macropain) subunit, beta type, 8 [Danio rerio]
gi|190338169|gb|AAI62902.1| Psmb8 protein [Danio rerio]
gi|190339582|gb|AAI62883.1| Psmb8 protein [Danio rerio]
Length = 271
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 131/235 (55%), Positives = 168/235 (71%), Gaps = 8/235 (3%)
Query: 26 SAAPSFSLPLSTDFDEFQKDTKAT------LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
+ F++P+ D +F K L H GTTTLAF F+ GV+VA DSRAS G
Sbjct: 34 TKCQEFAVPVGVDPSKFLKSCSCEDGVCIDLNH--GTTTLAFKFRHGVIVAVDSRASAGK 91
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI+S+ K+IEINPY+LGTM+G AADCQ+W R L +CRL++L NK+RISV+ ASKLL+
Sbjct: 92 YIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLS 151
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY+
Sbjct: 152 NMMLGYRGMGLSMGSMICGWDKQGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYR 211
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
DM++EEA EL RR I HAT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 212 EDMTVEEAYELGRRGIAHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRY 266
>gi|229367710|gb|ACQ58835.1| Proteasome subunit beta type-8 precursor [Anoplopoma fimbria]
Length = 275
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 164/233 (70%), Gaps = 4/233 (1%)
Query: 26 SAAPSFSLPLSTDFDEF----QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+ F++PL D F +D + GTTTLAF FK GV+VA DSRAS G Y+
Sbjct: 38 TKTQEFAVPLGVDPSGFLKSCNRDGGVCIDLNHGTTTLAFKFKYGVIVAVDSRASAGRYL 97
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N +RISV ASKLL N+
Sbjct: 98 ASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNQRISVAAASKLLCNM 157
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD EG RL G FS G GS YAYGV+DSGY+ D
Sbjct: 158 MLGYRGMGLSMGSMICGWDKEGPGLYYVDDEGKRLSGRMFSTGCGSSYAYGVVDSGYRDD 217
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
M++EEA EL RR I HAT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 218 MTVEEAYELGRRGIAHATHRDAYSGGVVNMYHMQEDGWIKVCKEDVSELIHRY 270
>gi|225708502|gb|ACO10097.1| Proteasome subunit beta type 8 precursor [Osmerus mordax]
Length = 275
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 167/233 (71%), Gaps = 4/233 (1%)
Query: 26 SAAPSFSLPLSTDFDEFQK----DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+ F++PL D F K + ++ GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 38 TTKQEFAVPLGVDPAGFLKSCSRENGVSIDLNHGTTTLAFKFRHGVIVAVDSRASAGSYI 97
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S+ K+IEINPY+LGTM+G AADCQ+W R L +CRL++L NK+RISV+ ASKLL+N+
Sbjct: 98 ASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLSNM 157
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD GPGLYYVD G RL G FS G GS YAYGV+DSGY+ D
Sbjct: 158 MQGYRGMGLSMGSMIIGWDNKGPGLYYVDDNGTRLSGRTFSTGCGSSYAYGVVDSGYQED 217
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
M++EEA EL RR I HAT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 218 MTVEEAYELGRRGIVHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRY 270
>gi|47271420|ref|NP_571467.2| proteasome subunit beta type-8 [Danio rerio]
gi|42490966|gb|AAH66288.1| Proteasome (prosome, macropain) subunit, beta type, 8 [Danio rerio]
Length = 271
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/235 (55%), Positives = 167/235 (71%), Gaps = 8/235 (3%)
Query: 26 SAAPSFSLPLSTDFDEFQKDTKAT------LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
+ F++P+ D +F K L H GTTTLAF F+ GV+VA DSRAS G
Sbjct: 34 TKCQEFAVPVGVDPSKFLKSCSCEDGVCIDLNH--GTTTLAFKFRHGVIVAVDSRASAGK 91
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI S+ K+IEINPY+LGTM+G AADCQ+W R L +CRL++L NK+RISV+ ASKLL+
Sbjct: 92 YIDSKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLS 151
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY+
Sbjct: 152 NMMLGYRGMGLSMGSMICGWDKQGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYR 211
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
DM++EEA EL RR I HAT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 212 EDMTVEEAYELGRRGIAHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRY 266
>gi|91085931|ref|XP_970194.1| PREDICTED: similar to proteasome subunit beta type 5,8 [Tribolium
castaneum]
Length = 279
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 131/234 (55%), Positives = 171/234 (73%), Gaps = 6/234 (2%)
Query: 25 LSAAPSFSLPLST----DFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
L + P +S P DE +D K H GTTTL F++K GV++A DSRA+ G +
Sbjct: 37 LLSVPPYSNPAENLAYFSKDESGRDIKIKFDH--GTTTLGFMYKGGVVLAVDSRATGGQF 94
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
I SQ++KKI+EIN ++LGT+AGGAADC +W R L +CR++EL N+ RISV ASKL+AN
Sbjct: 95 IGSQTMKKIVEINDFLLGTLAGGAADCVYWDRVLAKQCRMYELRNRERISVAAASKLMAN 154
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++Y+Y+GMGLS+G M+AGWD+ GP LYYVDSEG R G FSVGSGS YA+GVLDSGYK+
Sbjct: 155 MVYNYKGMGLSMGMMLAGWDKRGPQLYYVDSEGTRTPGKVFSVGSGSIYAFGVLDSGYKW 214
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
D++ EEA +L RR+IYHAT RDA SGG+ VY++ P GW + +D +LHY Y
Sbjct: 215 DLTDEEAYDLGRRSIYHATHRDAYSGGIVRVYHMKPTGWVHIDNNDCMDLHYKY 268
>gi|315518857|dbj|BAJ51757.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 273
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 133/228 (58%), Positives = 162/228 (71%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTTLAF FK GV+VA DSRAS G YIS+
Sbjct: 41 FAVPVGEEPVGFLKSCNTEAGARFELHHGTTTLAFKFKHGVIVAVDSRASAGNYISAGEY 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 101 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR 160
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSG+ YAYGVLDSGYK DM+IEE
Sbjct: 161 GMGLSVGSMICGWDKEGPGIYYVDDNGNRLSGRMFSTGSGNSYAYGVLDSGYKEDMTIEE 220
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I HAT RD+ SGGV ++Y++ +GW K+ DDV EL +HY
Sbjct: 221 AYELGRRGIAHATHRDSYSGGVVNLYHIQEDGWIKVCKDDVSELIHHY 268
>gi|47522620|ref|NP_999100.1| proteasome subunit beta type-8 [Sus scrofa]
gi|4545092|gb|AAD22390.1|AF059493_1 proteasome subunit LMP7 [Sus scrofa]
Length = 260
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 168/233 (72%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 23 SPELALPRGMQPTEFLRSLGGDGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 82
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 83 ATLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 142
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSG+++D
Sbjct: 143 MYQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYD 202
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+SIEEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 203 LSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 255
>gi|384497219|gb|EIE87710.1| proteasome component PRE2 [Rhizopus delemar RA 99-880]
Length = 187
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 124/178 (69%), Positives = 148/178 (83%)
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
MG YISSQ+VKK+IEINPY+LGTMAGGAADCQ+W R LG +CRLHEL NK RISV ASK
Sbjct: 1 MGNYISSQTVKKVIEINPYLLGTMAGGAADCQYWERELGRRCRLHELRNKERISVAAASK 60
Query: 137 LLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDS 196
LLAN++YSY+GMGLS+GTM+ GWD+TGP L+YVDS+G RLKG FSVGSGS +AYGVLDS
Sbjct: 61 LLANMVYSYKGMGLSMGTMVTGWDKTGPNLFYVDSDGSRLKGDIFSVGSGSTFAYGVLDS 120
Query: 197 GYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
GY +D+S+++A EL RR+IYHAT RDA SGG ++Y+V NGW DVGELH+ Y
Sbjct: 121 GYDYDLSVKDALELGRRSIYHATHRDAMSGGSVNLYHVTENGWDYHGNHDVGELHWEY 178
>gi|320169928|gb|EFW46827.1| LMP X [Capsaspora owczarzaki ATCC 30864]
Length = 295
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 134/236 (56%), Positives = 164/236 (69%), Gaps = 16/236 (6%)
Query: 25 LSAAPSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
+S P F +P D F +K + GTTTLAF FK G++VA DSRA+ G
Sbjct: 64 MSQLPVFDVPAVQDPAAFLHAYTEDPHSKVKIHIQHGTTTLAFKFKHGIIVAVDSRATGG 123
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
YI+S +VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLL
Sbjct: 124 SYIASGTVKKVIEINPYLLGTMAGGAADCSFWERELARRCRIYELRNKERISVAAASKLL 183
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
AN++Y Y+ MGLS+GTMI GWD+ GP LYYVDS+G RL G FSVGSGS YAYGVLD+G+
Sbjct: 184 ANMVYGYKNMGLSMGTMITGWDKRGPELYYVDSDGTRLHGDMFSVGSGSTYAYGVLDAGF 243
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
++DM+ EEA EL RR+IYHAT +Y+V GW K+S DV +LHY Y
Sbjct: 244 RYDMTPEEACELGRRSIYHATH----------LYHVREEGWVKISSTDVNQLHYGY 289
>gi|219567032|dbj|BAH05034.1| proteasome subunit, beta type 8 [Oryzias dancena]
gi|224473817|gb|ACN49158.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
Length = 273
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/228 (58%), Positives = 162/228 (71%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTTLAF FK GV+VA DSRAS G YIS+
Sbjct: 41 FAVPVGEEPSGFLKSCNTEGGARFELHHGTTTLAFKFKHGVIVAVDSRASAGNYISTGEY 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 101 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR 160
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSG+ YAYGVLDSGYK DM+IEE
Sbjct: 161 GMGLSVGSMICGWDKEGPGVYYVDDNGTRLSGRMFSTGSGNSYAYGVLDSGYKEDMTIEE 220
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I HAT RD+ SGGV ++Y++ +GW K+ DDV EL +HY
Sbjct: 221 AYELGRRGIAHATHRDSYSGGVVNLYHIKEDGWIKVCKDDVSELIHHY 268
>gi|358055465|dbj|GAA98585.1| hypothetical protein E5Q_05272 [Mixia osmundae IAM 14324]
Length = 299
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/256 (52%), Positives = 177/256 (69%), Gaps = 18/256 (7%)
Query: 15 FGSGDELCPELSAA---------PSFSLP---------LSTDFDEFQKDTKATLKHAKGT 56
F DEL E+++ P F +P S + + +A +K A GT
Sbjct: 16 FAQDDELEREVASLWKGKGTVQLPHFDMPQVDHPAAFLASVTSNNTVDNPQAQIKLAHGT 75
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTLAF +K GV+VA DSRA+ G YI+S +V+K+IEINP++LGTMAGGAADCQ+W LGI
Sbjct: 76 TTLAFRYKGGVLVAVDSRATAGSYIASGTVRKVIEINPFLLGTMAGGAADCQYWETYLGI 135
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+CRL+ELANK+RISV ASK L+N++Y Y+G GLS+GTMI GWD+TGP L+YVDS+G R+
Sbjct: 136 QCRLYELANKQRISVAAASKYLSNLVYGYKGQGLSMGTMICGWDKTGPALFYVDSDGSRM 195
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
KG FSVGSGS +AYGVLD GYK+D++ EEA +L R+IY A RDA SG ++Y+V
Sbjct: 196 KGDVFSVGSGSTFAYGVLDQGYKWDLTDEEAYDLGARSIYAAMHRDAFSGNSLNMYHVKE 255
Query: 237 NGWKKLSGDDVGELHY 252
+GW + D +LHY
Sbjct: 256 DGWLRFPNVDFNKLHY 271
>gi|390190128|dbj|BAM20998.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 162/212 (76%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
+KD K L+ GTTTLAF F+ GV+VA DSR + G YI +Q KK+IEINPY+LGTM+G
Sbjct: 10 EKDGKLKLQFNHGTTTLAFKFQHGVIVAVDSRCTAGKYIDTQYFKKVIEINPYLLGTMSG 69
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AADC +W R L CR+++L NK +I+V+ ASKLL+N+L YRGMGLS+G+MI GWD+
Sbjct: 70 SAADCVYWERVLAQHCRIYKLRNKEQITVSAASKLLSNMLAGYRGMGLSIGSMICGWDKK 129
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GPGLYYVD G RL G FS GSG YAYGV+DSG+++D+++ EA +LA+RAIYHAT RD
Sbjct: 130 GPGLYYVDENGTRLSGNMFSTGSGHSYAYGVMDSGHRYDLTLPEAYDLAQRAIYHATHRD 189
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A SGG ++Y+V +GW K+S +DVGEL+ Y
Sbjct: 190 AYSGGTVNMYHVKQDGWIKVSQEDVGELYQKY 221
>gi|449547489|gb|EMD38457.1| 20S proteasome subunit [Ceriporiopsis subvermispora B]
Length = 313
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/225 (59%), Positives = 169/225 (75%), Gaps = 5/225 (2%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
PS L + TD D + +KH GTTTLAF FK GV+VA DSRA+ G Y++S +VKK
Sbjct: 59 PSAFLRMHTD-DHADPSCRIKIKH--GTTTLAFRFKGGVIVAVDSRATAGSYVASGTVKK 115
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEINPY+LGTMAGGAADCQ+W LGI+CRLHEL N+ RISV ASK L+N++ +Y+GM
Sbjct: 116 VIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKFLSNLVSNYKGM 175
Query: 149 GLSV--GTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GLS+ GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD GY++D++ EE
Sbjct: 176 GLSMVKGTMICGWDKTGPAIFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDEE 235
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
A EL RR+IY A RDA SG ++Y+V +GW+ + DV E+H
Sbjct: 236 AQELGRRSIYAAGHRDAFSGNTINLYHVKEDGWRFIGNYDVSEMH 280
>gi|315518887|dbj|BAJ51776.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/228 (57%), Positives = 162/228 (71%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTTLAF FK GV+VA DSRAS G YIS+
Sbjct: 6 FAVPVGEEPSGFLKSCNTEGGARFELHHGTTTLAFKFKHGVIVAVDSRASAGNYISTGEY 65
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 66 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR 125
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSG+ YAYGVLDSGYK DM++EE
Sbjct: 126 GMGLSVGSMICGWDKEGPGVYYVDDNGTRLSGRMFSTGSGNSYAYGVLDSGYKEDMTVEE 185
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I HAT RD+ SGGV ++Y++ +GW K+ DDV EL +HY
Sbjct: 186 AYELGRRGIAHATHRDSYSGGVVNLYHIKEDGWIKVCKDDVSELIHHY 233
>gi|336369943|gb|EGN98284.1| hypothetical protein SERLA73DRAFT_183200 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382704|gb|EGO23854.1| hypothetical protein SERLADRAFT_470232 [Serpula lacrymans var.
lacrymans S7.9]
Length = 319
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 165/231 (71%), Gaps = 7/231 (3%)
Query: 29 PSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
P+F+ P D F + D +K GTTTLAF FK GV+VA DSR+S G YI
Sbjct: 49 PAFAFPAVQDPAAFLRLHTDDHDDPNCKIKIQHGTTTLAFKFKGGVIVAVDSRSSAGSYI 108
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
S +VKK+IEINPY+LGTMAGGAADCQ+W LG+ CRLHEL N+ RISV ASK L+N+
Sbjct: 109 GSGTVKKVIEINPYLLGTMAGGAADCQYWEMYLGMHCRLHELRNRERISVAAASKYLSNL 168
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+YSY+G GLS+GTMI GWD+TGP LYYVD++G RLKG FSVGSGS +AYGVLD GYK+
Sbjct: 169 VYSYKGTGLSMGTMICGWDKTGPALYYVDADGTRLKGDLFSVGSGSTFAYGVLDQGYKWG 228
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
++ EEA EL RR+IY A RDA +G ++Y+V GW + D+ +LHY
Sbjct: 229 LTDEEAQELGRRSIYAAGHRDAFTGNSCNLYHVKEEGWCFIGNYDLSQLHY 279
>gi|146147386|gb|ABQ01989.1| proteasome subunit beta type 8 [Salmo salar]
gi|148362158|gb|ABQ59680.1| PSMB8a [Salmo salar]
Length = 267
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/228 (57%), Positives = 163/228 (71%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
FS+P+ D F K ++ GTTTLAF F+ GV+VA DSRAS G YI+S+
Sbjct: 35 FSVPVGVDPSGFLKSCSREGGVSIDLNHGTTTLAFTFRHGVIVAVDSRASAGSYIASKEA 94
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L NK+RISV+ ASKLL N++ YR
Sbjct: 95 NKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLCNMMLGYR 154
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+G+MI GWD GPGLYYVD RL G FS G GS YAYGV+DSGY+ DM++EE
Sbjct: 155 GMGLSMGSMIVGWDNKGPGLYYVDDNATRLSGRMFSTGCGSSYAYGVIDSGYREDMTVEE 214
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I HAT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 215 AYELGRRGITHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRY 262
>gi|225703298|gb|ACO07495.1| Proteasome subunit beta type 8 precursor [Oncorhynchus mykiss]
Length = 276
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/234 (55%), Positives = 173/234 (73%), Gaps = 8/234 (3%)
Query: 29 PSFSLPLSTDFDEFQK---DTK-----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
P ++P+ D EF + D++ T+ GTTTLAF F+ GVMVA DSRAS G Y
Sbjct: 38 PELAVPVGVDPAEFLRPLVDSEEGVDGVTINLEHGTTTLAFKFQHGVMVAVDSRASAGSY 97
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
+S+Q KK+IEINP++L TM+G AADC +W R L +CR+++L NK RISV+ ASKLLAN
Sbjct: 98 VSTQMFKKVIEINPFLLETMSGSAADCVYWERVLAKECRIYKLRNKERISVSAASKLLAN 157
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++ +YRGMGLS+GTMI GWD+ GPGLYYVD G L G FS GSG+ YAYGV+DSGY++
Sbjct: 158 MVVNYRGMGLSMGTMICGWDKKGPGLYYVDDNGLGLCGNMFSTGSGNTYAYGVMDSGYRY 217
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
D+S+ EA +LA+RAI+HAT RDA SGG ++Y++ GW K+S +DVG+L++ +
Sbjct: 218 DLSVPEAYDLAQRAIFHATHRDAYSGGTVNMYHMRETGWIKVSQEDVGDLYHRF 271
>gi|62122596|dbj|BAD93264.1| PSMB8-A [Oryzias latipes]
Length = 273
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/228 (57%), Positives = 162/228 (71%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTTL+F FK GV+VA DSRAS G YI++
Sbjct: 41 FAVPVGEEPVGFLKSCNTEGGARFELHHGTTTLSFKFKHGVIVAVDSRASTGSYIATCEY 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 101 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR 160
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSGS YAYGVLDSGYK DM++EE
Sbjct: 161 GMGLSVGSMICGWDKEGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEE 220
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I HAT RD+ SGGV ++Y++ +GW K+ DDV EL +HY
Sbjct: 221 AYELGRRGIVHATHRDSYSGGVVNMYHIQEDGWIKVCKDDVSELLHHY 268
>gi|357620434|gb|EHJ72628.1| proteasome subunit beta 5 [Danaus plexippus]
Length = 281
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/244 (55%), Positives = 168/244 (68%), Gaps = 3/244 (1%)
Query: 11 TSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVA 70
T F S P A P +L DE + K H GTTTL F +K GV++A
Sbjct: 32 TQNFLNSAQLALPPF-ANPVETLAQFNTKDETGRQIKIEFDH--GTTTLGFRYKGGVLLA 88
Query: 71 ADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRIS 130
DSRA+ G +I SQS+KKI+EIN Y+LGT+AGGAADC +W R L +CRL+EL N+ RIS
Sbjct: 89 VDSRATGGQFIGSQSMKKIVEINDYLLGTLAGGAADCVYWDRVLAKQCRLYELRNRERIS 148
Query: 131 VTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYA 190
V ASKL+AN++Y+Y+GMGLS+G M+AG D+ G LYYVDSEG R G FSVGSGS YA
Sbjct: 149 VAAASKLMANMVYNYKGMGLSMGMMLAGIDKRGAQLYYVDSEGTRTPGKVFSVGSGSVYA 208
Query: 191 YGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 250
+GVLDSGY++D+ EEA EL RRAIYHAT RDA SGG+ VY++ GW +S +D EL
Sbjct: 209 FGVLDSGYRWDLEDEEAQELGRRAIYHATHRDAYSGGIIRVYHINDKGWVNISNEDCSEL 268
Query: 251 HYHY 254
HY Y
Sbjct: 269 HYKY 272
>gi|353236461|emb|CCA68455.1| probable PRE2-20S core proteasome subunit (beta5) (C-terminal
fragment) [Piriformospora indica DSM 11827]
Length = 298
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 171/233 (73%), Gaps = 7/233 (3%)
Query: 27 AAPSF---SLPLSTDFDEFQKDTKA----TLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
A P F ++P T F + D A +K A GTTTLAF F+ G++VA DSRA+ G
Sbjct: 43 APPEFVVPNVPSPTAFLQLHTDDHADPNCRIKIAHGTTTLAFRFRGGIIVAVDSRATAGS 102
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI+S +VKK+IEIN ++LGTMAGGAADCQ+W LGI+CRLHEL N+ RISV ASK L+
Sbjct: 103 YIASGTVKKVIEINKFLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYLS 162
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++YSY+GMGLS+GTMI GWD+TGP L+YVDS+G RLKG FSVGSGS +AYGVLD GY
Sbjct: 163 NLVYSYKGMGLSMGTMICGWDKTGPALFYVDSDGTRLKGDVFSVGSGSTFAYGVLDQGYH 222
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+++S E+A EL RR+IY A RDA SG ++Y+V GW+ + DV ++HY
Sbjct: 223 WELSDEDAQELGRRSIYAAGHRDAFSGNTINLYHVRETGWEFIGNYDVTKMHY 275
>gi|291395993|ref|XP_002714656.1| PREDICTED: proteasome beta 8 subunit [Oryctolagus cuniculus]
Length = 276
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 167/233 (71%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + D ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFLQSLGRDGDRNVQIEMAHGTTTLAFKFQHGVVVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATIRVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL GT FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MFQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGTMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L Y Y
Sbjct: 219 LSPEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMYQY 271
>gi|307195303|gb|EFN77251.1| Proteasome subunit beta type-5 [Harpegnathos saltator]
Length = 287
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/270 (50%), Positives = 181/270 (67%), Gaps = 21/270 (7%)
Query: 14 FFGSGDELCPELSA------------APSFSLPLSTDFDEFQKDTKATLKHAK-----GT 56
FF D+ E+ A P F P T + T T KH K GT
Sbjct: 18 FFQEKDKFAGEIEAYTKNFSNNLQLSVPPFINPAET-LGSIAQGTDDTGKHLKIKFDHGT 76
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTL F ++ G+++A DSRA+ G +I S ++KKI+EIN Y+LGT+AGGAADC +W R L
Sbjct: 77 TTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVEINDYLLGTLAGGAADCVYWDRVLAK 136
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+CR++EL N+ RIS+ ASKLL+N++Y+Y+GMGLS+G M+AGWD+ GPGLYYVDSEG R
Sbjct: 137 QCRMYELRNRERISIAAASKLLSNMIYNYKGMGLSIGMMLAGWDKRGPGLYYVDSEGTRT 196
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
G FSVGSGS +A+GVLDSGYK+D++ EEA EL RR+IYHAT RDA SGG+ VY++
Sbjct: 197 PGKVFSVGSGSVFAFGVLDSGYKWDLTDEEAYELGRRSIYHATHRDAYSGGIIRVYHMKS 256
Query: 237 NGWKKLSGDDVGELHYHYY---PVTPSTVE 263
GW +S +D +LHY Y+ + PST +
Sbjct: 257 TGWVHISDEDSKDLHYAYHAEKEIQPSTFQ 286
>gi|315518855|dbj|BAJ51756.1| proteasome subunit, beta type 8 [Oryzias celebensis]
gi|315518866|dbj|BAJ51763.1| proteasome subunit, beta type 8 [Oryzias matanensis]
gi|315518875|dbj|BAJ51769.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 273
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/228 (57%), Positives = 161/228 (70%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTT+AF FK GV+VA DSRAS G Y+ +
Sbjct: 41 FAVPVGEEPIGFLKSCNTEGGARFELHHGTTTMAFKFKHGVIVAVDSRASTGSYVDTCEY 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 101 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNSHRISVAAASKLLCNMMLGYR 160
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSG YAYGVLDSGYK DM++EE
Sbjct: 161 GMGLSVGSMICGWDKEGPGIYYVDDNGNRLSGRMFSTGSGRNYAYGVLDSGYKEDMTVEE 220
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RRAI HAT RD+ SGGV ++Y++ +GW K+ DDV EL +HY
Sbjct: 221 AYELGRRAIVHATHRDSYSGGVVNMYHIQEDGWIKVCKDDVSELLHHY 268
>gi|340057211|emb|CCC51553.1| putative proteasome beta 5 subunit, fragment [Trypanosoma vivax
Y486]
Length = 292
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 125/199 (62%), Positives = 156/199 (78%)
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTL F F G+++A DSRAS G YISSQ+V K++EIN Y+LGTMAGGAADCQ+W R LG+
Sbjct: 93 TTLGFHFDGGIIIAVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWQRVLGM 152
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+CRL EL N RISV AS++LANI YSYR GLS+GTM+AGWD GP LYYVD +G R+
Sbjct: 153 ECRLWELRNNSRISVAAASRILANITYSYRNYGLSMGTMVAGWDHFGPSLYYVDDKGTRV 212
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
K FSVGSGS YAYGVLD GY+ D+++EEA +LARR+I+HAT+RD ASGG+ +VY+V
Sbjct: 213 KHELFSVGSGSIYAYGVLDQGYRKDLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHE 272
Query: 237 NGWKKLSGDDVGELHYHYY 255
GW ++S DD +L+ YY
Sbjct: 273 KGWTQISRDDQTKLYDRYY 291
>gi|219567042|dbj|BAH05039.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 238
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/228 (57%), Positives = 161/228 (70%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTT+AF FK GV+VA DSRAS G Y+ +
Sbjct: 6 FAVPVGEEPIGFLKSCNTEGGARFELHHGTTTMAFKFKHGVIVAVDSRASTGSYVDTCEY 65
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 66 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNSHRISVAAASKLLCNMMLGYR 125
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSG YAYGVLDSGYK DM++EE
Sbjct: 126 GMGLSVGSMICGWDKEGPGIYYVDDNGNRLSGRMFSTGSGRNYAYGVLDSGYKEDMTVEE 185
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RRAI HAT RD+ SGGV ++Y++ +GW K+ DDV EL +HY
Sbjct: 186 AYELGRRAIVHATHRDSYSGGVVNMYHIQEDGWIKVCKDDVSELLHHY 233
>gi|390190130|dbj|BAM20999.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 160/212 (75%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
+ D K L+ GTTTLAF F+ GV+VA DSR + G YI +Q KK+IEINPY+LGTM+G
Sbjct: 10 KNDGKLKLQFNHGTTTLAFKFQHGVIVAVDSRCTAGKYIDTQYFKKVIEINPYLLGTMSG 69
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AADC +W R L CR+++L NK I+V+ ASKLL+N+L YRGMGLS+G+MI GWD+
Sbjct: 70 SAADCVYWERVLAQHCRIYKLRNKEEITVSAASKLLSNMLAGYRGMGLSIGSMICGWDKK 129
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GPGLYYVD G RL G FS GSG YAYGV+DSG+++D+++ EA +LA+RAIYHAT RD
Sbjct: 130 GPGLYYVDENGTRLSGNMFSTGSGHSYAYGVMDSGHRYDLTVPEAYDLAQRAIYHATHRD 189
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A SGG ++Y+V +GW K+S +DVGEL+ Y
Sbjct: 190 AYSGGTVNMYHVKQDGWIKVSQEDVGELYQKY 221
>gi|59275968|dbj|BAD89554.1| proteasome subunit [Oncorhynchus mykiss]
Length = 267
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 163/228 (71%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ D F K ++ GTTTLAF F+ GV+VA DSRAS G YI+S+
Sbjct: 35 FAVPVGVDPSGFLKSCSREGGVSIDLNHGTTTLAFKFRHGVIVAVDSRASAGSYIASKEA 94
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L NK+RISV+ ASKLL N++ YR
Sbjct: 95 NKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLCNMMLGYR 154
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+G+MI GWD GPGLYYVD RL G FS G GS YAYGV+DSGY+ DM++EE
Sbjct: 155 GMGLSMGSMIVGWDNKGPGLYYVDDNATRLSGRMFSTGCGSSYAYGVMDSGYREDMTVEE 214
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I HAT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 215 AYELGRRGITHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRY 262
>gi|185133011|ref|NP_001117007.1| proteasome subunit beta type 7b [Salmo salar]
gi|12003013|gb|AAG43440.1|AF184938_1 low molecular mass protein 7 [Salmo salar]
gi|148362121|gb|ABQ59648.1| PSMB8 [Salmo salar]
gi|209738090|gb|ACI69914.1| Proteasome subunit beta type-8 precursor [Salmo salar]
gi|223647058|gb|ACN10287.1| Proteasome subunit beta type-8 precursor [Salmo salar]
gi|223672927|gb|ACN12645.1| Proteasome subunit beta type-8 precursor [Salmo salar]
gi|262189354|gb|ACY30372.1| PSMB8 [Salmo salar]
Length = 267
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 163/228 (71%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ D F K ++ GTTTLAF F+ GV+VA DSRAS G YI+S+
Sbjct: 35 FAVPVGVDPSGFLKSCSREGGVSIDLNHGTTTLAFTFRHGVIVAVDSRASAGSYIASKEA 94
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L NK+RISV+ ASKLL N++ YR
Sbjct: 95 NKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLCNMMLGYR 154
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+G+MI GWD GPGLYYVD RL G FS G GS YAYGV+DSGY+ DM++EE
Sbjct: 155 GMGLSMGSMIIGWDNKGPGLYYVDDNATRLSGRMFSTGCGSSYAYGVVDSGYREDMTVEE 214
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I HAT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 215 AYELGRRGITHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRY 262
>gi|210148640|gb|ACJ09226.1| proteasome subunit beta 5 [Helicoverpa armigera]
Length = 280
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 167/233 (71%), Gaps = 7/233 (3%)
Query: 27 AAPSFSLPLST-----DFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
A P F+ P+ T DE K K H GTTTL F +K GV++A DSRA+ G +I
Sbjct: 42 ATPPFANPVETLAQFNQKDETGKAIKINFDH--GTTTLGFRYKGGVLLAVDSRATGGQFI 99
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
SQS+KKI+EIN Y+LGT+AGGAADC +W R L +CRL+EL N+ RISV ASKL+AN+
Sbjct: 100 GSQSMKKIVEINDYLLGTLAGGAADCVYWDRVLAKQCRLYELRNRERISVAAASKLMANM 159
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y+Y+GMGLS+G M+AG D+ G LYYVDSEG R G FSVGSGS YA+GVLDSGY +D
Sbjct: 160 VYNYKGMGLSMGMMLAGVDKRGAQLYYVDSEGTRTPGKVFSVGSGSVYAFGVLDSGYSWD 219
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S ++A EL RRAIYHAT RDA SGG+ VY++ GW +S +D ELHY Y
Sbjct: 220 LSDKDAQELGRRAIYHATHRDAYSGGIIRVYHISEKGWVNISNEDCSELHYKY 272
>gi|2055313|dbj|BAA19767.1| LMP7 [Oryzias latipes]
Length = 225
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 126/200 (63%), Positives = 152/200 (76%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTL+F FK GV+VA DSRAS G YI++ K+IEINPY+LGTM+G AADC++W R L
Sbjct: 21 GTTTLSFKFKHGVIVAVDSRASTGSYIATCEYNKVIEINPYLLGTMSGSAADCKYWERLL 80
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CRL+ L N RISV ASKLL N++ YRGMGLSVG+MI GWD+ GPG+YYVD G
Sbjct: 81 AKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDDNGN 140
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
RL G FS GSGS YAYGVLDSGYK DM++EEA EL RR I HAT RD+ SGGV ++Y++
Sbjct: 141 RLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHI 200
Query: 235 GPNGWKKLSGDDVGELHYHY 254
+GW K+ DDV EL +HY
Sbjct: 201 QEDGWIKVCKDDVSELLHHY 220
>gi|393220434|gb|EJD05920.1| N-terminal nucleophile aminohydrolase [Fomitiporia mediterranea
MF3/22]
Length = 307
Score = 266 bits (679), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/232 (56%), Positives = 165/232 (71%), Gaps = 7/232 (3%)
Query: 28 APSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
AP F LP D F + D +K GTTTLAF ++ GV+VA DSRA+ G Y
Sbjct: 47 APMFKLPSLADPTAFLRLHTDDHADPSCRIKIQHGTTTLAFRYQGGVIVAVDSRATAGSY 106
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
I+S +VKK+IEIN ++LGTMAGGAADCQFW LG++CRLHEL N RISV ASK L N
Sbjct: 107 IASGTVKKVIEINKFLLGTMAGGAADCQFWETYLGMQCRLHELRNHERISVAAASKYLCN 166
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++YSY+G GLS+GTMI GWD+TGP ++YVDS+G RLKG FSVGSGS +AYGVLD GY +
Sbjct: 167 LVYSYKGTGLSMGTMICGWDKTGPAVFYVDSDGQRLKGDLFSVGSGSTFAYGVLDQGYHW 226
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
D++ +EA EL RR+IY A RDA SG +VY+V +GW + DV ++HY
Sbjct: 227 DLTDDEAIELGRRSIYAAGHRDAFSGNTINVYHVKEDGWTFIGNYDVSKMHY 278
>gi|94966773|ref|NP_001035570.1| proteasome subunit beta type-8 [Bos taurus]
gi|74267608|gb|AAI02171.1| Proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Bos taurus]
Length = 276
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 168/233 (72%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P F+LP EF + ++K ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPEFALPRGMQPTEFFRSLGGNGESKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 DTLKVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYV+ G RL G FS GSG+ +AYGV+DSGY+ D
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVNDSGTRLSGNMFSTGSGNSHAYGVMDSGYRPD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+SIEEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQY 271
>gi|147225186|emb|CAN13318.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 208
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/202 (61%), Positives = 157/202 (77%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTLAF F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G AADCQ+W R
Sbjct: 2 AHGTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIEINPYLLGTMSGSAADCQYWER 61
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
L +CRL+ L N RISV+ ASKLL+N++Y YRGMGLS+G+MI GWD+ GPGLYYVD
Sbjct: 62 LLAKECRLYYLRNGDRISVSAASKLLSNMMYQYRGMGLSMGSMICGWDKKGPGLYYVDEN 121
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G RL G FS GSG+ YAYGV+DSG+++D+SIEEA +L RRAI HAT RD+ SGGV ++Y
Sbjct: 122 GTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMY 181
Query: 233 YVGPNGWKKLSGDDVGELHYHY 254
++ +GW K+ DV +L + Y
Sbjct: 182 HMKEDGWVKVESTDVSDLMHQY 203
>gi|428673094|gb|EKX74007.1| proteasome beta 5 subunit, putative [Babesia equi]
Length = 264
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K KGTTTLAFI GV++A DSRASMG IS+Q+V K+IEIN Y+LGTMAGGAADC +W
Sbjct: 51 KFNKGTTTLAFIINSGVIIAVDSRASMGSIISTQNVSKVIEINSYLLGTMAGGAADCSYW 110
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R+L CRLHEL N+ RISV AS+LLANI + +RG GLS GTMIAG D GP LYYV
Sbjct: 111 ERHLAKLCRLHELRNQSRISVGAASQLLANIFFYFRGYGLSAGTMIAGHDAKGPHLYYVS 170
Query: 171 SEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVAS 230
SEG RLKG FSVGSGS +AYGV+D Y+ DMS+EEA ELA RAIY A RD SGG +
Sbjct: 171 SEGERLKGRLFSVGSGSLFAYGVIDQHYRSDMSLEEAVELATRAIYQAAHRDGFSGGAVN 230
Query: 231 VYYVGPNGWKKL-SGDDVGELHYHY 254
+Y+V +GW KL D+GELHY Y
Sbjct: 231 LYHVHKDGWTKLVDRRDIGELHYEY 255
>gi|82752963|ref|XP_727486.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii 17XNL]
gi|23483352|gb|EAA19051.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii]
Length = 287
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 175/248 (70%), Gaps = 9/248 (3%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQK-DTKATLKHAKGTTTLAFIFKEGVMVAADSRASM 77
DEL E AP S+P DF ++ K + K KGTTTLAF FKEG++VA DSRASM
Sbjct: 27 DEL--EFCVAP-ISVP--RDFIKYAKTENKKLFDFHKGTTTLAFKFKEGIIVAVDSRASM 81
Query: 78 GGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKL 137
G +ISSQ+V+KIIEIN Y+LGTMAGGAADC +W + LG +++EL N +ISV AS +
Sbjct: 82 GSFISSQNVEKIIEINKYILGTMAGGAADCFYWEKYLGQIIKIYELRNNEKISVRAASTI 141
Query: 138 LANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSG 197
L+NILY Y+G GL G +++G+D TG ++Y+D EG +++G FS GSGS YAY +LDS
Sbjct: 142 LSNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSA 201
Query: 198 YKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK-LSGDDVGELHYHYYP 256
Y +++S+E+A EL R AIYHATFRD SGG V+Y+ NG+ K + G+DV +LHYHY
Sbjct: 202 YDYNLSVEQAVELGRNAIYHATFRDGGSGGKVRVFYIHKNGYSKIIEGEDVYDLHYHY-- 259
Query: 257 VTPSTVEQ 264
PS +Q
Sbjct: 260 TNPSQKDQ 267
>gi|444519089|gb|ELV12572.1| Proteasome subunit beta type-8 [Tupaia chinensis]
Length = 274
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/231 (54%), Positives = 165/231 (71%), Gaps = 4/231 (1%)
Query: 28 APSFSLPLSTD----FDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
+P +LP F ++ ++ A GTTTLAF F+ GV+VA DSRAS G YI++
Sbjct: 39 SPELALPRGMQPTEFFQSLDREGNIQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYIAT 98
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++
Sbjct: 99 LRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMC 158
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D+S
Sbjct: 159 QYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNCYAYGVMDSGYRPDLS 218
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+EEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 VEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESSDVSDLLHRY 269
>gi|258614012|ref|NP_542945.2| proteasome subunit beta type-8 [Rattus norvegicus]
gi|84028246|sp|P28064.3|PSB8_RAT RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Macropain subunit C13; AltName: Full=Multicatalytic
endopeptidase complex subunit C13; AltName:
Full=Proteasome component C13; AltName: Full=Proteasome
subunit beta-5i; Flags: Precursor
gi|46237562|emb|CAE83942.1| proteasome (prosome, macropain) subunit, beta type, 8 [Rattus
norvegicus]
gi|149043357|gb|EDL96808.1| proteosome (prosome, macropain) subunit, beta type 8, isoform CRA_a
[Rattus norvegicus]
Length = 276
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/237 (55%), Positives = 168/237 (70%), Gaps = 6/237 (2%)
Query: 28 APSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
AP +LP EF ++ K ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 APELALPRGMQPTEFLRSFGDDQERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D
Sbjct: 159 MLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 258
+S EEA +LARRAI +AT RD+ SGGV ++Y++ +GW K+ DV +L + Y T
Sbjct: 219 LSPEEAYDLARRAIVYATHRDSYSGGVVNMYHMKKDGWVKVESTDVSDLLHKYREAT 275
>gi|332373358|gb|AEE61820.1| unknown [Dendroctonus ponderosae]
Length = 279
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 169/230 (73%), Gaps = 4/230 (1%)
Query: 28 APSFSLPLSTDFDEFQKDT---KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
P F+ P S + F KD K + GTTTL F+++ GV++A DSRA+ G +I SQ
Sbjct: 40 VPPFADP-SKNLARFGKDESGRKININFDHGTTTLGFMYQGGVVLAVDSRATGGQFIGSQ 98
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
++KKI+EIN ++LGT+AGGAADC +W R L +CR++EL N+ RISV ASKL++N++Y+
Sbjct: 99 TMKKIVEINDFLLGTLAGGAADCVYWDRVLAKQCRMYELRNRERISVAAASKLMSNMVYN 158
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
Y+GMGLS+G M+AGWD+ GP LYY+DSEG R G FSVGSGS YA+GVLDSGYK+D++
Sbjct: 159 YKGMGLSMGMMLAGWDKRGPQLYYIDSEGARTPGKIFSVGSGSVYAFGVLDSGYKWDLTD 218
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA +L RR+IYHAT RDA SGG+ VY++ GW + +D +LHY Y
Sbjct: 219 EEAYDLGRRSIYHATHRDAYSGGIVRVYHMKQTGWVHIDNNDCTDLHYKY 268
>gi|340502310|gb|EGR29012.1| proteasome subunit beta type, putative [Ichthyophthirius
multifiliis]
Length = 286
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/243 (53%), Positives = 168/243 (69%), Gaps = 18/243 (7%)
Query: 30 SFSLPLSTDFD-----------------EFQKDTKATLKHAKGTTTLAFIFKEGVMVAAD 72
SF P++ FD E + K+ + KGTTTL F F+ GV++A D
Sbjct: 26 SFQEPITEKFDFQYAPLDNPCEFVHSLKEAKGPEKSLMNFKKGTTTLGFRFQGGVLLAVD 85
Query: 73 SRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVT 132
SRAS G + +S++V+KIIEIN ++LGTMAGGAADCQFW + L I+CR ++L + R+SV
Sbjct: 86 SRASQGSFDASETVRKIIEINEFLLGTMAGGAADCQFWEQYLAIQCRKYQLQHGERVSVA 145
Query: 133 GASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYG 192
AS++L NILY Y+ GLSVG M+AGWD GP LYY+D++G R+KG FSVGSGS YAYG
Sbjct: 146 AASRILINILYGYKNQGLSVGCMLAGWDNQGPQLYYLDNDGSRIKGDLFSVGSGSTYAYG 205
Query: 193 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKL-SGDDVGELH 251
VLDS YK+D+S++EA EL +RAIYHATFRDA SGGV VY+V GW + G DV LH
Sbjct: 206 VLDSHYKWDLSLKEAVELGKRAIYHATFRDAGSGGVVRVYHVHQGGWDIIHDGLDVNTLH 265
Query: 252 YHY 254
Y +
Sbjct: 266 YEF 268
>gi|294953043|ref|XP_002787566.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
gi|239902590|gb|EER19362.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
Length = 276
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/242 (54%), Positives = 168/242 (69%), Gaps = 6/242 (2%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQKDTKAT----LKHAKGTTTLAFIFKEGVMVAADSR 74
DE L+ F+L F D KA + KGTTTL F+F GV++A DSR
Sbjct: 22 DEQVSGLAEMDRFALAPVAQPQNFCMDMKARSGRLMNFNKGTTTLGFVFDGGVLIAVDSR 81
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
ASMG Y+SSQ+V+K++ I ++GTMAGGAADCQFW R+LG C+L+EL N +RI+ A
Sbjct: 82 ASMGSYVSSQTVRKVLHITDRLIGTMAGGAADCQFWERHLGKLCKLYELRNNQRITTAAA 141
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWDE-TGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGV 193
SK+LANI+YSY+G GLS GTMIAG+D TGP LY VD +G RLK FSVGSGS YAYG+
Sbjct: 142 SKMLANIMYSYKGYGLSCGTMIAGYDAVTGPALYMVDDQGTRLKNNMFSVGSGSTYAYGI 201
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKL-SGDDVGELHY 252
+D+GYK D++++EA L +RAIYHAT +D ASGG VY+V +GW + G DV ELHY
Sbjct: 202 VDAGYKHDLTLDEAVALGKRAIYHATNKDGASGGYVRVYHVHKDGWTIMEDGQDVMELHY 261
Query: 253 HY 254
Y
Sbjct: 262 KY 263
>gi|344298836|ref|XP_003421097.1| PREDICTED: proteasome subunit beta type-8-like [Loxodonta africana]
Length = 276
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 167/233 (71%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF ++ ++ GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFWSLSGDRERNVCIEMNHGTTTLAFKFQHGVIVAVDSRASAGTYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ KK+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ANLQTKKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G+ FS GSG+PYAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDDSGTRLSGSMFSTGSGNPYAYGVMDSGYQPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +LARRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLARRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|12003011|gb|AAG43439.1|AF184937_1 low molecular mass protein 7 [Salmo salar]
Length = 267
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/228 (56%), Positives = 162/228 (71%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ D F K ++ GTTTLAF F+ GV+VA DSRAS G YI+S+
Sbjct: 35 FAVPVGVDPSGFLKSCSREGGVSIDLNHGTTTLAFTFRHGVIVAVDSRASAGSYIASKEA 94
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G A DCQ+W R L +CRL++L NK+RISV+ ASKLL N++ YR
Sbjct: 95 NKVIEINPYLLGTMSGSAGDCQYWERLLAKECRLYKLRNKQRISVSAASKLLCNMMLGYR 154
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+G+MI GWD GPGLYYVD RL G FS G GS YAYGV+DSGY+ DM++EE
Sbjct: 155 GMGLSMGSMIIGWDNKGPGLYYVDDNATRLSGRMFSTGCGSSYAYGVVDSGYREDMTVEE 214
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I HAT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 215 AYELGRRGITHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRY 262
>gi|289740977|gb|ADD19236.1| 20S proteasome regulatory subunit beta type PSMB5/PSMB8/PRE2
[Glossina morsitans morsitans]
Length = 279
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/238 (55%), Positives = 170/238 (71%), Gaps = 6/238 (2%)
Query: 21 LCPELSAAPSFSLPL----STDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRAS 76
L P + +AP + PL + D + + H GTTTL F ++ GV++A DSRA+
Sbjct: 36 LNPYMLSAPPYEDPLKNLQNIVIDGVKSGIQMHFDH--GTTTLGFKYQGGVILAVDSRAT 93
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
G +I SQ++KKI+EIN YMLGT+AGGAADC +W R L +CRLHEL NK RISV ASK
Sbjct: 94 GGQFIGSQTMKKIVEINQYMLGTLAGGAADCVYWDRVLAKECRLHELRNKERISVAAASK 153
Query: 137 LLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDS 196
++ANI + Y+GMGLS+G M+AG+D+ GPGLYYVDS+ R G FSVGSGS YA+GVLDS
Sbjct: 154 IMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSDASRSPGNVFSVGSGSVYAFGVLDS 213
Query: 197 GYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
GY++D+ +EA EL RRAIY+ATFRDA SGG+ VY++ +GW +S D +LHY Y
Sbjct: 214 GYRWDLKDDEAQELGRRAIYNATFRDAYSGGIVRVYHMTADGWVNVSNTDCMDLHYKY 271
>gi|209875265|ref|XP_002139075.1| proteasome subunit beta type 5 precursor [Cryptosporidium muris
RN66]
gi|209554681|gb|EEA04726.1| proteasome subunit beta type 5 precursor, putative [Cryptosporidium
muris RN66]
Length = 279
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 160/215 (74%), Gaps = 2/215 (0%)
Query: 41 EFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTM 100
E+Q T+ + KGTTTL FI++ GV++A DSRA+ GGYI+S SVKKIIEIN Y+LGTM
Sbjct: 55 EYQDGRLKTMIN-KGTTTLGFIYQGGVILAVDSRATQGGYIASGSVKKIIEINNYLLGTM 113
Query: 101 AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
AGGAADC +W R L CRLHEL NK+RISV GAS L+ANI + YR GLS G MI+G+D
Sbjct: 114 AGGAADCSYWERVLAKLCRLHELRNKQRISVAGASNLIANIFFHYRNYGLSAGIMISGYD 173
Query: 161 ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATF 220
+ GP LYYVD+ G R+KG RFS+GSGS YA GVLDS + FD++ E+A EL RRAI HAT+
Sbjct: 174 KNGPQLYYVDNSGARVKGNRFSIGSGSVYAIGVLDSVHHFDLTDEDAIELGRRAITHATY 233
Query: 221 RDAASGGVASVYYVGPNGWK-KLSGDDVGELHYHY 254
RD SGG+ VY + G+K +SG D ELHY Y
Sbjct: 234 RDGGSGGLVRVYQITSQGYKVHISGQDASELHYKY 268
>gi|440909598|gb|ELR59487.1| Proteasome subunit beta type-8 [Bos grunniens mutus]
Length = 276
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 168/233 (72%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + ++K ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFRSLGGNGESKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLKVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYV+ G RL G FS GSG+ +AYGV+DSGY+ D
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVNDSGTRLSGNMFSTGSGNSHAYGVMDSGYRPD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+SIEEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQY 271
>gi|209733970|gb|ACI67854.1| Proteasome subunit beta type-8 precursor [Salmo salar]
Length = 267
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 162/228 (71%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
FS+P+ D F K ++ GTTTLAF F+ GV+VA DSRAS G YI+S+
Sbjct: 35 FSVPVGVDPSGFLKSCSREGGVSIDLNHGTTTLAFTFRHGVIVAVDSRASAGSYIASKEA 94
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L NK+RISV+ ASKLL N++ YR
Sbjct: 95 NKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLCNMMLGYR 154
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+G+MI GWD GPGLYYVD RL G FS G GS YAYGV+DSGY+ DM++EE
Sbjct: 155 GMGLSMGSMIVGWDNKGPGLYYVDDNATRLSGRMFSTGCGSSYAYGVIDSGYREDMTVEE 214
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I AT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 215 AYELGRRGITLATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRY 262
>gi|157135040|ref|XP_001663403.1| proteasome subunit beta type 5,8 [Aedes aegypti]
gi|108870309|gb|EAT34534.1| AAEL013236-PA [Aedes aegypti]
Length = 282
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/231 (55%), Positives = 170/231 (73%), Gaps = 4/231 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
A P F P + + + Q +++ ++ GTTTL F F+ GV++A DSRA+ G +I S
Sbjct: 43 AVPPFQEP-AENLAKLQAHGESSGIKMEFDHGTTTLGFRFQGGVILAVDSRATGGQFIGS 101
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
Q++KKI+EIN Y+LGT+AGGAADC +W R L +CR++EL NK RISV ASK+++NI+Y
Sbjct: 102 QTMKKIVEINDYLLGTLAGGAADCVYWDRVLAKECRIYELRNKERISVAAASKIMSNIVY 161
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
Y+GMGLS+G M+AG+D+ GP LYY+DSEG R G FSVGSGS YAYGVLDSGYK+D++
Sbjct: 162 YYKGMGLSMGMMLAGYDKRGPQLYYIDSEGTRTPGKVFSVGSGSIYAYGVLDSGYKWDLT 221
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA +L RRAIYHAT RDA SGG+ VY++ P GW +S D +LH+ Y
Sbjct: 222 DEEAQDLGRRAIYHATHRDAYSGGIVRVYHIKPTGWVNISNQDCMDLHFKY 272
>gi|410958876|ref|XP_003986039.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Felis catus]
Length = 270
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/227 (55%), Positives = 165/227 (72%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
+P F+LP + ++ A GTTTLAF F+ GV+VA DSRAS G YI++
Sbjct: 39 SPEFALPRGMQSHGGNGERNVQIEMAHGTTTLAFKFQHGVVVAVDSRASAGTYIATLRCN 98
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+++ YRG
Sbjct: 99 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVFQYRG 158
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGLS+G+MI GWD+ GPGLYYV+S+G RL G FS GSG+ YAYGV+DSGY+ D+S EEA
Sbjct: 159 MGLSMGSMICGWDKKGPGLYYVNSDGTRLSGNMFSTGSGNTYAYGVMDSGYRPDLSPEEA 218
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EL RRAI +AT RD+ SGGV ++Y++ +GW KL DV +L + Y
Sbjct: 219 YELGRRAIVYATHRDSYSGGVVNMYHMKEDGWVKLESTDVSDLLHRY 265
>gi|219567040|dbj|BAH05038.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 238
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 160/228 (70%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTTL+F FK GV+VA DSRAS G Y+ +
Sbjct: 6 FAIPVGEEPVGFLKSCNTEGGAHFELHHGTTTLSFKFKHGVIVAVDSRASTGSYVDTCEY 65
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 66 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR 125
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSGS YAYGVLDSGYK DM++EE
Sbjct: 126 GMGLSVGSMICGWDKEGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEE 185
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I HAT RD+ SGGV ++Y++ +GW K+ DDV EL + Y
Sbjct: 186 AYELGRRGIVHATHRDSYSGGVVNMYHIQEDGWIKVCKDDVSELLHRY 233
>gi|410958874|ref|XP_003986038.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Felis catus]
Length = 276
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 168/233 (72%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P F+LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPEFALPRGMQPTEFFQSHGGNGERNVQIEMAHGTTTLAFKFQHGVVVAVDSRASAGTYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLRCNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
++ YRGMGLS+G+MI GWD+ GPGLYYV+S+G RL G FS GSG+ YAYGV+DSGY+ D
Sbjct: 159 VFQYRGMGLSMGSMICGWDKKGPGLYYVNSDGTRLSGNMFSTGSGNTYAYGVMDSGYRPD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA EL RRAI +AT RD+ SGGV ++Y++ +GW KL DV +L + Y
Sbjct: 219 LSPEEAYELGRRAIVYATHRDSYSGGVVNMYHMKEDGWVKLESTDVSDLLHRY 271
>gi|348541149|ref|XP_003458049.1| PREDICTED: proteasome subunit beta type-8-like [Oreochromis
niloticus]
Length = 275
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 163/233 (69%), Gaps = 4/233 (1%)
Query: 26 SAAPSFSLPLSTDFDEFQK----DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
S F++P + F K D ++ GTTTLAF F+ GV+VA DSRAS G Y+
Sbjct: 38 SKTQEFAVPPGVEPSGFLKSCNSDGGVCIEMNHGTTTLAFKFRHGVIVAVDSRASAGRYL 97
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N+
Sbjct: 98 ASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNM 157
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY+ D
Sbjct: 158 MLGYRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYRED 217
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
M++EEA EL RR I HAT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 218 MTVEEAYELGRRGIAHATHRDAYSGGVVNMYHMQEDGWIKVCKEDVSELIHRY 270
>gi|354487488|ref|XP_003505905.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-8-like
[Cricetulus griseus]
Length = 271
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 165/238 (69%), Gaps = 6/238 (2%)
Query: 23 PELSAAPSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRAS 76
P AP +LP +F ++ ++ A GTTTLAF F+ GV+VA DSRAS
Sbjct: 30 PXSVQAPELALPRGMQPTDFLRSFGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRAS 89
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
G YIS+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASK
Sbjct: 90 AGTYISTLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASK 149
Query: 137 LLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDS 196
LL+N++ YRGMGLS+G+M+ GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DS
Sbjct: 150 LLSNMMLQYRGMGLSMGSMVCGWDKKGPGLYYVDENGTRLSGQMFSTGSGNTYAYGVMDS 209
Query: 197 GYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
GY+ D+S EEA +L RRAI HAT RD SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 210 GYRQDLSPEEAYDLGRRAIVHATHRDCYSGGVVNMYHMKEDGWVKVETSDVSDLMHKY 267
>gi|328787761|ref|XP_394680.3| PREDICTED: proteasome subunit beta type-5-like [Apis mellifera]
Length = 282
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
DE K K H GTTTL F ++ G+++A DSRA+ G +I S ++KKI+EIN Y+LGT
Sbjct: 61 DEAGKHLKIRFDH--GTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVEINDYLLGT 118
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
+AGGAADC +W R L +CR +EL N+ RIS+ ASKLL+N++Y+Y+GMGLS+G M+AGW
Sbjct: 119 LAGGAADCVYWDRVLAKQCRTYELRNRERISIAAASKLLSNMIYNYKGMGLSIGMMLAGW 178
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GP LYYVDSEG R G FSVGSGS YA+G LDSGY++D+S EEA +L +R+IYHAT
Sbjct: 179 DKRGPSLYYVDSEGARTPGKVFSVGSGSIYAFGTLDSGYRWDLSDEEAYQLGKRSIYHAT 238
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
RDA SGG+ VY++ P GW +S +D ELHY Y
Sbjct: 239 HRDAYSGGIVRVYHIKPTGWVHISDEDCKELHYMY 273
>gi|350409192|ref|XP_003488646.1| PREDICTED: proteasome subunit beta type-5-like [Bombus impatiens]
Length = 282
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 127/232 (54%), Positives = 168/232 (72%), Gaps = 3/232 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P ++ A + L+ DE K K H GTTTL F ++ G+++A DSRA+ G +I
Sbjct: 45 PYINPAEKLA-QLAEGTDEAGKHLKIKFDH--GTTTLGFQYRGGIVLAVDSRATGGQFIG 101
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
S ++KKI+EIN Y+LGT+AGGAADC +W R L +CR +EL N+ RIS+ ASKLL+N++
Sbjct: 102 SSTMKKIVEINDYLLGTLAGGAADCVYWDRVLAKQCRTYELRNRERISIAAASKLLSNMI 161
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+Y+GMGLS+G M+AGWD+ GP LYYVDSEG R G FSVGSGS YA+G LDSGY++D+
Sbjct: 162 YNYKGMGLSIGMMLAGWDKRGPSLYYVDSEGARTPGKVFSVGSGSIYAFGALDSGYRWDL 221
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+ EEA EL RR+IYHAT RDA SGG+ VY++ P GW +S +D +LHY Y
Sbjct: 222 TDEEAYELGRRSIYHATHRDAYSGGIVRVYHMKPTGWVHISDEDCKDLHYMY 273
>gi|340712774|ref|XP_003394930.1| PREDICTED: proteasome subunit beta type-5-like [Bombus terrestris]
Length = 282
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 127/232 (54%), Positives = 168/232 (72%), Gaps = 3/232 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P ++ A + L+ DE K K H GTTTL F ++ G+++A DSRA+ G +I
Sbjct: 45 PYINPAEKLA-QLAEGTDEAGKHLKIKFDH--GTTTLGFQYRGGIVLAVDSRATGGQFIG 101
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
S ++KKI+EIN Y+LGT+AGGAADC +W R L +CR +EL N+ RIS+ ASKLL+N++
Sbjct: 102 SSTMKKIVEINDYLLGTLAGGAADCVYWDRVLAKQCRTYELRNRERISIAAASKLLSNMI 161
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+Y+GMGLS+G M+AGWD+ GP LYYVDSEG R G FSVGSGS YA+G LDSGY++D+
Sbjct: 162 YNYKGMGLSIGMMLAGWDKRGPSLYYVDSEGARTPGKVFSVGSGSIYAFGALDSGYRWDL 221
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+ EEA EL RR+IYHAT RDA SGG+ VY++ P GW +S +D +LHY Y
Sbjct: 222 TDEEAYELGRRSIYHATHRDAYSGGIVRVYHMKPTGWVHISDEDCKDLHYMY 273
>gi|431916890|gb|ELK16650.1| Proteasome subunit beta type-8 [Pteropus alecto]
Length = 274
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 165/231 (71%), Gaps = 4/231 (1%)
Query: 28 APSFSLPLSTDFDEFQK----DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI +
Sbjct: 39 SPELALPRGMQPTEFFQSLSGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIDT 98
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++
Sbjct: 99 LRVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMC 158
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
YRGMGLS+G+MI GWD+ GPGLYYV+ G RL G FS GSG+ YAYGV+DSGY+ ++S
Sbjct: 159 QYRGMGLSIGSMICGWDKKGPGLYYVNENGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLS 218
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+EEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQY 269
>gi|108860908|sp|Q3T112.2|PSB8_BOVIN RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Proteasome subunit beta-5i; Flags: Precursor
gi|63169161|gb|AAY34697.1| proteasome subunit beta type 8 [Bos taurus]
gi|296474549|tpg|DAA16664.1| TPA: proteasome subunit beta type-8 precursor [Bos taurus]
Length = 276
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 167/233 (71%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + ++K ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFRSLGGNGESKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADC +W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLKVNKVIEINPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ +AYGV+DSGY+ D
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+SIEEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQY 271
>gi|196259781|ref|NP_001124502.1| proteasome subunit beta type-8 [Ovis aries]
gi|193245504|gb|ACF16970.1| HA2B [Ovis aries]
Length = 276
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 166/233 (71%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + ++ ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFRSLGGNGESNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLKVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ +AYGV+DSGY+ D
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+SIEEA +L RRAI HAT RD+ SGG ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSIEEAYDLGRRAIVHATHRDSYSGGFVNMYHMKEDGWVKVESTDVSDLMHQY 271
>gi|380021709|ref|XP_003694700.1| PREDICTED: proteasome subunit beta type-5-like [Apis florea]
Length = 282
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
DE K K H GTTTL F ++ G+++A DSRA+ G +I S ++KKI+EIN Y+LGT
Sbjct: 61 DEAGKHLKIRFDH--GTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVEINDYLLGT 118
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
+AGGAADC +W R L +CR +EL N+ RIS+ ASKLL+N++Y+Y+GMGLS+G M+AGW
Sbjct: 119 LAGGAADCVYWDRVLAKQCRTYELRNRERISIAAASKLLSNMIYNYKGMGLSIGMMLAGW 178
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GP LYYVDSEG R G FSVGSGS YA+G LDSGY++D+S EEA EL +R+IYHAT
Sbjct: 179 DKRGPSLYYVDSEGARTPGKVFSVGSGSIYAFGTLDSGYRWDLSDEEAYELGKRSIYHAT 238
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
RDA SGG+ VY++ P GW +S +D +LHY Y
Sbjct: 239 HRDAYSGGIVRVYHIKPTGWVHISDEDCKDLHYMY 273
>gi|432094632|gb|ELK26138.1| Proteasome subunit beta type-8 [Myotis davidii]
Length = 289
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/229 (55%), Positives = 168/229 (73%), Gaps = 3/229 (1%)
Query: 29 PSFSLPLSTDFDEFQK---DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQS 85
P L L T+F + + ++ ++ A GTTTLAF F+ GV+VA DSRAS G YI++
Sbjct: 56 PHPRLFLPTEFLQALRGDGESSVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATLR 115
Query: 86 VKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSY 145
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ Y
Sbjct: 116 VNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQY 175
Query: 146 RGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
RGMGLS+G+MI GWD+ GPGLYYVD G RL G+ FS GSG+ YAYGV+DSGY+ D+S+E
Sbjct: 176 RGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGSMFSTGSGNSYAYGVMDSGYRPDLSLE 235
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 236 EAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQY 284
>gi|300122116|emb|CBK22690.2| unnamed protein product [Blastocystis hominis]
Length = 273
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/231 (54%), Positives = 166/231 (71%), Gaps = 4/231 (1%)
Query: 25 LSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
L P+ S ++F +D+ +K KGTTTLAF F+ GV+V+ DSRA+ G +I+S
Sbjct: 36 LPNVPNCSQYTKSNFGAEYEDSHQMVKFCKGTTTLAFKFQGGVIVSVDSRATQGQFIASN 95
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
SV K+IEINP++LGTMAGGAADC FW R +G++ RL+EL N RISV ASK+L++ LY
Sbjct: 96 SVHKVIEINPFLLGTMAGGAADCYFWERRMGVEARLYELRNGERISVAAASKILSDFLYH 155
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG----TRFSVGSGSPYAYGVLDSGYKF 200
Y+ GLSVGTMI GWD+TGP ++YVD++G RLK + FSVGSGS YAY VLD Y +
Sbjct: 156 YKDYGLSVGTMICGWDKTGPQIFYVDNDGTRLKADEKRSYFSVGSGSSYAYAVLDQLYHY 215
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
DM+ +EA +L RRAIYHAT RDA SGG+ +VY + P GW+ + DV +LH
Sbjct: 216 DMTDDEAIDLGRRAIYHATHRDAMSGGINNVYLIKPEGWRFIGAIDVKDLH 266
>gi|403221234|dbj|BAM39367.1| proteasome subunit beta type [Theileria orientalis strain Shintoku]
Length = 267
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTTL F+F GV++A DSRASMG +S+Q+V K+IEIN Y+LGTMAGGAADC +W R+
Sbjct: 55 KGTTTLGFVFDHGVILAVDSRASMGPIVSTQNVSKVIEINSYLLGTMAGGAADCSYWERH 114
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L CRLHEL N+ RISV AS++LANI Y ++G GLS GTMIAG+D GPGLYYV ++G
Sbjct: 115 LAKLCRLHELRNQSRISVGAASQILANIFYYFKGYGLSAGTMIAGYDLNGPGLYYVSNDG 174
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+KG FSVGSGS +AYGV+D GY+ +M+++EA EL RAIY A RD SGGV ++Y+
Sbjct: 175 ERMKGRLFSVGSGSMFAYGVIDEGYRSNMTLQEAVELGSRAIYQAAHRDGYSGGVVNLYH 234
Query: 234 VGPNGWKKL-SGDDVGELHYHYYPV 257
V +GW KL DV E+HYHY V
Sbjct: 235 VHKDGWTKLIDRKDVNEIHYHYAQV 259
>gi|149732106|ref|XP_001496055.1| PREDICTED: proteasome subunit beta type-8-like isoform 1 [Equus
caballus]
Length = 276
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 166/233 (71%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP +F + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTDFLQSLGGNGEGNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNSYAYGVMDSGYRNN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+SIEEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|170065467|ref|XP_001867951.1| proteasome subunit beta type 8 [Culex quinquefasciatus]
gi|167882529|gb|EDS45912.1| proteasome subunit beta type 8 [Culex quinquefasciatus]
Length = 263
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/231 (54%), Positives = 169/231 (73%), Gaps = 4/231 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
A P F P + + + Q +++ + GTTTL F F+ GV++A DSRA+ G +I S
Sbjct: 24 AVPPFQEP-AENLAKLQAHGESSGIKMDFDHGTTTLGFRFQGGVILAVDSRATGGQFIGS 82
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
Q++KKI+EIN Y+LGT+AGGAADC +W R L +CR++EL NK RISV ASK+++NI+Y
Sbjct: 83 QTMKKIVEINDYLLGTLAGGAADCVYWDRVLAKECRIYELRNKERISVAAASKIMSNIVY 142
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
Y+GMGLS+G M+AG+D+ GP LYY+DSEG R G FSVGSGS YAYGVLDSGY++D+S
Sbjct: 143 YYKGMGLSMGMMLAGYDKRGPQLYYIDSEGTRTPGKVFSVGSGSIYAYGVLDSGYRWDLS 202
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
E+A +L RRAIYHAT RDA SGG+ VY++ P GW +S D +LH+ Y
Sbjct: 203 DEDAQDLGRRAIYHATHRDAYSGGIVRVYHIKPTGWVNISNQDCMDLHFKY 253
>gi|332021182|gb|EGI61567.1| Proteasome subunit beta type-5 [Acromyrmex echinatior]
Length = 286
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/244 (53%), Positives = 171/244 (70%), Gaps = 11/244 (4%)
Query: 27 AAPSFSLPLST------DFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
A P F P T DE K K H GTTTL F ++ G+++A DSRA+ G +
Sbjct: 42 AMPPFVNPAETLGQIVQGTDESGKSLKIKFDH--GTTTLGFQYQGGIILAVDSRATGGQF 99
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
I S ++KKI+EIN Y+LGT+AGGAADC +W R L +CR++EL N+ RIS+ ASKLL+N
Sbjct: 100 IGSSTMKKIVEINDYLLGTLAGGAADCVYWDRVLARQCRMYELRNRERISIAAASKLLSN 159
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++Y+++GMGLS+G M+AGWD+ GPGLYYVDSEG R G FSVGSGS +A+GVLDSGY++
Sbjct: 160 MIYNFKGMGLSIGMMLAGWDKRGPGLYYVDSEGTRTPGKVFSVGSGSVFAFGVLDSGYRW 219
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYP---V 257
D++ E+A EL RRAIYHAT RDA SGG+ VY++ GW +S D +LHY Y+
Sbjct: 220 DLTDEQAYELGRRAIYHATHRDAYSGGIIRVYHMKSTGWVHISDQDSKDLHYAYHADKSA 279
Query: 258 TPST 261
PST
Sbjct: 280 EPST 283
>gi|71033507|ref|XP_766395.1| proteasome subunit beta type 5 [Theileria parva strain Muguga]
gi|68353352|gb|EAN34112.1| proteasome subunit beta type 5, putative [Theileria parva]
Length = 266
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/202 (63%), Positives = 153/202 (75%), Gaps = 1/202 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTTL FIF GV++A DSRASMG +S+QSV K+IEIN Y+LGTMAGGAADC +W R+
Sbjct: 54 KGTTTLGFIFDHGVILAVDSRASMGPIVSTQSVSKVIEINSYLLGTMAGGAADCSYWERH 113
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L CRLHEL N+ RISV AS++LANI Y ++G GLS GTMIAG+D GPGLYYV SEG
Sbjct: 114 LAKLCRLHELRNQCRISVGAASQILANIFYYFKGYGLSAGTMIAGYDLNGPGLYYVSSEG 173
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+KG FSVGSGS +AYGV+D GY+ DMS+EEA EL RAIY A RD SGG ++Y+
Sbjct: 174 ERVKGKLFSVGSGSMFAYGVIDQGYRSDMSLEEAVELGTRAIYQAGHRDGFSGGFVNLYH 233
Query: 234 VGPNGWKKL-SGDDVGELHYHY 254
V +GW KL D+ ELHY Y
Sbjct: 234 VHKDGWTKLVDRRDINELHYLY 255
>gi|417398242|gb|JAA46154.1| Putative 20s proteasome regulatory subunit beta type [Desmodus
rotundus]
Length = 276
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 166/233 (71%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQKDT------KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGVQPTEFFQSLGGNGAGNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYV+ G RL G+ FS GSG+ YAYGV+DSGY+ D
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVNENGTRLSGSMFSTGSGNSYAYGVMDSGYRPD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S+EEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSLEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHRY 271
>gi|322791530|gb|EFZ15921.1| hypothetical protein SINV_10172 [Solenopsis invicta]
Length = 292
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/244 (53%), Positives = 172/244 (70%), Gaps = 11/244 (4%)
Query: 27 AAPSFSLPLST------DFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
A P F P T DE K+ K H GTTTL F ++ G+++A DSRA+ G +
Sbjct: 49 AVPPFVNPAETLGHIAQGTDETGKNLKIKFDH--GTTTLGFRYQGGIILAVDSRATGGQF 106
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
I S ++KKI+EIN Y+LGT+AGGAADC +W R L +CR++EL N+ RIS+ ASKLL+N
Sbjct: 107 IGSSTMKKIVEINDYLLGTLAGGAADCVYWDRVLARQCRMYELRNRERISIAAASKLLSN 166
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++Y+++GMGLS+G M+AGWD+ GPGLYYVDSEG R G FSVGSGS +A+GVLDSGY++
Sbjct: 167 MIYNFKGMGLSIGMMLAGWDKRGPGLYYVDSEGTRTPGKVFSVGSGSVFAFGVLDSGYRW 226
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYP---V 257
D++ E+A EL RR+IYHAT RDA SGG+ VY++ GW +S D +LHY Y+
Sbjct: 227 DLTDEQAYELGRRSIYHATHRDAYSGGIIRVYHMKSTGWVHISDQDSKDLHYAYHADKLA 286
Query: 258 TPST 261
PST
Sbjct: 287 EPST 290
>gi|115394802|gb|ABI97195.1| HA2B [Sus scrofa]
Length = 276
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 165/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFLRSLGGDGERDVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADC +W R L +CRL+ L N RIS++ ASKLL+N+
Sbjct: 99 ATLRVNKVIEINPYLLGTMSGCAADCHYWERLLAKECRLYYLRNGDRISLSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSG+++D
Sbjct: 159 MYHYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+ IE A +L RRAI HAT RD+ SGGV ++Y++ +GW + DV +L +HY
Sbjct: 219 LIIEYAYDLGRRAIVHATHRDSYSGGVVNMYHMNEDGWVNVDSTDVSDLMHHY 271
>gi|68069847|ref|XP_676835.1| 20S proteasome beta subunit [Plasmodium berghei strain ANKA]
gi|56496705|emb|CAH96419.1| 20S proteasome beta subunit, putative [Plasmodium berghei]
Length = 269
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/248 (52%), Positives = 175/248 (70%), Gaps = 9/248 (3%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQK-DTKATLKHAKGTTTLAFIFKEGVMVAADSRASM 77
DEL E AP S+P +F ++ K + K KGTTTLAF FKEG++VA DSRASM
Sbjct: 26 DEL--EFCIAP-ISVP--RNFIKYAKTENKKLFDFHKGTTTLAFKFKEGIIVAVDSRASM 80
Query: 78 GGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKL 137
G +ISSQ+V+KIIEIN Y+LGTMAGGAADC +W + LG +++EL N +ISV AS +
Sbjct: 81 GSFISSQNVEKIIEINKYILGTMAGGAADCFYWEKYLGQIIKIYELRNNEKISVRAASTI 140
Query: 138 LANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSG 197
L+NILY Y+G GL G +++G+D TG ++Y+D EG +++G FS GSGS YAY +LDS
Sbjct: 141 LSNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSA 200
Query: 198 YKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK-LSGDDVGELHYHYYP 256
Y +++S+++A EL R AIYHATFRD SGG V+Y+ NG+ K + G+DV +LHYHY
Sbjct: 201 YDYNLSVDQAVELGRNAIYHATFRDGGSGGKVRVFYIHKNGYSKIIEGEDVYDLHYHY-- 258
Query: 257 VTPSTVEQ 264
PS +Q
Sbjct: 259 TNPSQKDQ 266
>gi|334323745|ref|XP_001377227.2| PREDICTED: proteasome subunit beta type-8-like [Monodelphis
domestica]
Length = 268
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/232 (55%), Positives = 164/232 (70%), Gaps = 6/232 (2%)
Query: 29 PSFSLPLSTDFDEFQKDTKA------TLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P ++P EF + +A ++ A GTTTLAF F+ GV+VA DSRAS G YI+
Sbjct: 32 PELAVPRGMQPPEFLRSLEADPAQQVRIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIA 91
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++
Sbjct: 92 TLHVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYRLRNGERISVSAASKLLSNMM 151
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRGMGLS+G+MI GWD+ GPGLYYVD G RL GT FS GSG+ YAYGV+DSGY+ D+
Sbjct: 152 CQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGTMFSTGSGNSYAYGVMDSGYRPDL 211
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
S EEA +L RRAI HAT RD+ SGG ++Y++ +GW K+ DV L + Y
Sbjct: 212 SPEEAYDLGRRAIVHATHRDSYSGGFVNMYHMKEDGWVKVESSDVSNLFHKY 263
>gi|225719232|gb|ACO15462.1| Proteasome subunit beta type-5 precursor [Caligus clemensi]
gi|225719406|gb|ACO15549.1| Proteasome subunit beta type-5 precursor [Caligus clemensi]
Length = 270
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/227 (57%), Positives = 161/227 (70%)
Query: 30 SFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI 89
+ LP +D + + + A GTTTL F ++ G ++A DSRA+ GGYI S SV+KI
Sbjct: 36 ALELPPLSDPCSYLDSVRPLIHLAHGTTTLGFKYEGGTILAVDSRATSGGYIGSGSVRKI 95
Query: 90 IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMG 149
IE++ Y+L TMAGGAADC +W R L CRL+EL N RISV ASKLLAN Y Y+GMG
Sbjct: 96 IEVSDYLLATMAGGAADCMYWDRVLATDCRLYELRNHCRISVAAASKLLANNAYRYKGMG 155
Query: 150 LSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAE 209
LS+G MIAG+D+ GPGLYYVDSEG R G FSVGSGS YAYGVLD+ Y++D++ EEA E
Sbjct: 156 LSMGAMIAGYDKRGPGLYYVDSEGSRTPGNLFSVGSGSVYAYGVLDADYRYDLTDEEAYE 215
Query: 210 LARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYP 256
L RRAI HAT+RDAASGG+ V +V G K +S +D ELHY Y P
Sbjct: 216 LGRRAIAHATYRDAASGGIVRVMHVTKEGKKMISEEDCKELHYKYLP 262
>gi|301757125|ref|XP_002914391.1| PREDICTED: proteasome subunit beta type-8-like [Ailuropoda
melanoleuca]
gi|281338481|gb|EFB14065.1| hypothetical protein PANDA_002294 [Ailuropoda melanoleuca]
Length = 276
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 168/235 (71%), Gaps = 10/235 (4%)
Query: 28 APSFSLPLSTDFDEF--------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
+P + P EF ++D + + H GTTTLAF F++GV+VA DSRA+ G
Sbjct: 39 SPELAFPRGMQPTEFFQSLGGNGERDVRIEMNH--GTTTLAFKFQQGVIVAVDSRATAGS 96
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YIS+ + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+
Sbjct: 97 YISTSRINKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS 156
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N+++ YRGM LS+G+MI GWD+ GPGLYYVD++G RL G FS GSG+ YAYGV+DSGY+
Sbjct: 157 NMVFQYRGMDLSMGSMICGWDKKGPGLYYVDADGTRLSGDMFSTGSGNTYAYGVMDSGYR 216
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
D+S EEA EL RRAI +AT RD+ SGGV ++Y+V +GW K+ DV +L + Y
Sbjct: 217 PDLSPEEAYELGRRAIVYATHRDSYSGGVVNMYHVMEDGWVKVESTDVSDLLHQY 271
>gi|337298923|ref|NP_001229673.1| proteasome subunit beta type-8 [Ornithorhynchus anatinus]
gi|156602028|gb|ABU86903.1| Psmb8 [Ornithorhynchus anatinus]
Length = 270
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 156/208 (75%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
+D + +K KGTTTLAF F+ GV+VA DSRA+ G YI SQ V K+IEINP +LGTM+G
Sbjct: 54 NRDDRVQIKLFKGTTTLAFNFQHGVVVAVDSRATAGNYICSQMVNKVIEINPQLLGTMSG 113
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+
Sbjct: 114 SAADCQYWERLLAKECRLYHLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 173
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GPGLYYVD +G RL G FS GSG YAYGV+DSGY++D+S EEA +L RRAI HAT RD
Sbjct: 174 GPGLYYVDEDGVRLSGLMFSTGSGRNYAYGVMDSGYRYDLSPEEAYDLGRRAIVHATHRD 233
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGEL 250
SGG+ ++Y++ +GW K+ DV +L
Sbjct: 234 GYSGGMVNMYHMKQDGWIKVEQTDVNDL 261
>gi|383850454|ref|XP_003700810.1| PREDICTED: proteasome subunit beta type-5-like [Megachile
rotundata]
Length = 282
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 168/233 (72%), Gaps = 6/233 (2%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAK-----GTTTLAFIFKEGVMVAADSRASMGGYI 81
A P + P T +F + T T KH K GTTTL F ++ G+++A DSRA+ G +I
Sbjct: 42 AVPPYLNPAET-LGKFAEGTDETGKHLKIKFDHGTTTLGFQYQGGIILAVDSRATGGQFI 100
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
S ++KKI+EIN Y+LGT+AGGAADC +W R L +CR +EL N+ R+S+ ASKLL+N+
Sbjct: 101 GSSTMKKIVEINDYLLGTLAGGAADCVYWDRVLAKQCRTYELRNRERMSIAAASKLLSNM 160
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y+Y+GMGLS+G M+AGWD+ GPGLYYVDSEG R G FSVGSGS YA+G LDSGY +D
Sbjct: 161 VYTYKGMGLSMGMMLAGWDKRGPGLYYVDSEGTRTPGKVFSVGSGSIYAFGTLDSGYSWD 220
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
++ EEA EL RR+IYHAT RDA SGG+ VY++ GW +S +D +LHY Y
Sbjct: 221 LTDEEAYELGRRSIYHATHRDAYSGGIVRVYHMKSTGWVHISDEDCKDLHYMY 273
>gi|403268779|ref|XP_003926444.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 276
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 165/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFVQSLCGDGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|410931040|ref|XP_003978904.1| PREDICTED: proteasome subunit beta type-8-like [Takifugu rubripes]
Length = 275
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 159/228 (69%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++PL D F K ++ GTTTLAF FK GV+VA DSRAS G YISSQ
Sbjct: 43 FAVPLGVDPSMFIKSCNNEAGVDIELDHGTTTLAFKFKHGVIVAVDSRASAGKYISSQDA 102
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN Y+LGTM+G AADC +W R L +CRL+ L N RISV ASKLLAN++ YR
Sbjct: 103 KKVIEINSYLLGTMSGSAADCMYWERLLAKECRLYRLRNNHRISVAAASKLLANMMLGYR 162
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPGLYYVD G R G FS GSG+ YAY V+DSG + DM++EE
Sbjct: 163 GMGLSVGSMICGWDKQGPGLYYVDENGNRFSGQMFSTGSGNSYAYAVVDSGLREDMTVEE 222
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A +L RR I +AT RDA SGGV ++Y++ +GW K+ DDV +L + Y
Sbjct: 223 AYDLGRRGIVYATHRDAYSGGVVNMYHMMEDGWIKVCQDDVSQLIHLY 270
>gi|219567012|dbj|BAH05024.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGNRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSELIHRY 270
>gi|399218150|emb|CCF75037.1| unnamed protein product [Babesia microti strain RI]
Length = 234
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 123/202 (60%), Positives = 153/202 (75%), Gaps = 1/202 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTTLAF+F+ G++VA DSRASMG ISSQ+VKKIIEIN YMLGTMAG AADC +W R+
Sbjct: 26 KGTTTLAFVFQGGIIVAVDSRASMGSIISSQTVKKIIEINEYMLGTMAGCAADCSYWERH 85
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L CRLH++ + R+S+ ASK+LANI+Y +RG GLS+GTM+AGWD TGP L + +G
Sbjct: 86 LSKLCRLHQVKHGERVSIVAASKMLANIMYYFRGYGLSMGTMLAGWDHTGPKLCCIMDDG 145
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+ G FSVGSGS +AYGV+D GYKFD++++EA EL +R IY AT RD SGG +VY+
Sbjct: 146 SRVVGNLFSVGSGSLFAYGVIDDGYKFDLTVDEAVELGKRGIYQATLRDGGSGGCVTVYH 205
Query: 234 VGPNGWKK-LSGDDVGELHYHY 254
V NGW K + DV ELH Y
Sbjct: 206 VHQNGWTKVVDRQDVSELHRFY 227
>gi|118781366|ref|XP_559226.2| AGAP010718-PA [Anopheles gambiae str. PEST]
gi|116130136|gb|EAL41084.2| AGAP010718-PA [Anopheles gambiae str. PEST]
Length = 284
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 157/200 (78%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTL F F+ GV++A DSRA+ G +I SQ++KKI+EIN Y+LGT+AGGAADC +W R L
Sbjct: 73 GTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVEINDYLLGTLAGGAADCVYWDRVL 132
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASK+++NI+Y Y+GMGLS+G M+AG+D+ GP LYY+DSEG
Sbjct: 133 AKECRIYELRNKERISVAAASKIMSNIVYYYKGMGLSMGMMLAGYDKRGPQLYYIDSEGT 192
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R G FSVGSGS YAYGVLDSGY +D++ EEA +L RRAIYHAT RDA SGG+ VY++
Sbjct: 193 RTPGKVFSVGSGSIYAYGVLDSGYHWDLTDEEAQDLGRRAIYHATHRDAYSGGIVRVYHI 252
Query: 235 GPNGWKKLSGDDVGELHYHY 254
P+GW +S D +LH+ +
Sbjct: 253 KPSGWVNISNQDCMDLHFQF 272
>gi|312372646|gb|EFR20567.1| hypothetical protein AND_19880 [Anopheles darlingi]
Length = 257
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 167/231 (72%), Gaps = 4/231 (1%)
Query: 27 AAPSFSLPLSTDFDEFQ---KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
A P F P + + + Q + + + GTTTL F F+ GV++A DSRA+ G +I S
Sbjct: 14 AVPPFQDP-AVNLAKLQAAGETSGIKMDFDHGTTTLGFRFQGGVILAVDSRATGGQFIGS 72
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
Q++KKI+EIN Y+LGT+AGGAADC +W R L +CR++EL NK RISV ASK+++NI+Y
Sbjct: 73 QTMKKIVEINDYLLGTLAGGAADCVYWDRVLAKECRIYELRNKERISVAAASKIMSNIVY 132
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
Y+GMGLS+G M+AG+D+ GP LYY+DSEG R G FSVGSGS YAYGVLDSGY +D++
Sbjct: 133 YYKGMGLSMGMMLAGYDKRGPQLYYIDSEGTRTPGKVFSVGSGSIYAYGVLDSGYHWDLT 192
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA +L RRAIYHAT RDA SGG+ VY++ P GW +S D +LH+ +
Sbjct: 193 DEEAQDLGRRAIYHATHRDAYSGGIVRVYHIKPTGWVNISNQDCMDLHFQF 243
>gi|344253005|gb|EGW09109.1| Proteasome subunit beta type-8 [Cricetulus griseus]
Length = 228
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 157/211 (74%)
Query: 44 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGG 103
++ ++ A GTTTLAF F+ GV+VA DSRAS G YIS+ V K+IEINPY+LGTM+G
Sbjct: 14 QERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGTYISTLRVNKVIEINPYLLGTMSGC 73
Query: 104 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 163
AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+M+ GWD+ G
Sbjct: 74 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMVCGWDKKG 133
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
PGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D+S EEA +L RRAI HAT RD
Sbjct: 134 PGLYYVDENGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIVHATHRDC 193
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 194 YSGGVVNMYHMKEDGWVKVETSDVSDLMHKY 224
>gi|219567056|dbj|BAH05046.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
gi|219567060|dbj|BAH05048.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSELIHRY 270
>gi|219567062|dbj|BAH05049.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 238
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 64 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 124 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 184 EEAYELGCRGITHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSELIHRY 233
>gi|219567016|dbj|BAH05026.1| proteasome subunit, beta type 8 [Oryzias luzonensis]
gi|224473834|gb|ACN49173.1| proteasome associated anitgen processing [Oryzias luzonensis]
Length = 275
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSELIHRY 270
>gi|296785033|ref|NP_001171881.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|18157533|dbj|BAB83848.1| PSMB8-A [Oryzias latipes]
gi|295901497|dbj|BAJ07261.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|295901536|dbj|BAJ07285.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|295901538|dbj|BAJ07286.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 275
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSELIHRY 270
>gi|270011211|gb|EFA07659.1| hypothetical protein TcasGA2_TC030625 [Tribolium castaneum]
Length = 273
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 170/231 (73%), Gaps = 6/231 (2%)
Query: 25 LSAAPSFSLPLST-DFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
L + P +S L+ DE +D K H GTTTL F++K GV++A DSRA+ G +I S
Sbjct: 37 LLSVPPYSNNLAYFSKDESGRDIKIKFDH--GTTTLGFMYKGGVVLAVDSRATGGQFIGS 94
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
Q++KKI+EIN ++LGT+AGGAADC +W R L +CR++EL N+ RISV ASKL+AN++Y
Sbjct: 95 QTMKKIVEINDFLLGTLAGGAADCVYWDRVLAKQCRMYELRNRERISVAAASKLMANMVY 154
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
+Y+GMGLS+G M+AGWD+ LYYVDSEG R G FSVGSGS YA+GVLDSGYK+D++
Sbjct: 155 NYKGMGLSMGMMLAGWDKR---LYYVDSEGTRTPGKVFSVGSGSIYAFGVLDSGYKWDLT 211
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA +L RR+IYHAT RDA SGG+ VY++ P GW + +D +LHY Y
Sbjct: 212 DEEAYDLGRRSIYHATHRDAYSGGIVRVYHMKPTGWVHIDNNDCMDLHYKY 262
>gi|114326385|ref|NP_001041550.1| proteasome subunit beta type-8 precursor [Canis lupus familiaris]
gi|62900679|sp|Q5W416.1|PSB8_CANFA RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Proteasome subunit beta-5i; Flags: Precursor
gi|55162804|emb|CAH63452.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Canis lupus familiaris]
Length = 276
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/235 (54%), Positives = 164/235 (69%), Gaps = 10/235 (4%)
Query: 28 APSFSLPLSTDFDEF--------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
AP ++P EF +K+ + + H GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 39 APELAVPRGMQPTEFFQSLGENGEKNIRKEMVH--GTTTLAFKFQHGVIVAVDSRATAGN 96
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YISS V K+IEINP +LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+
Sbjct: 97 YISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS 156
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++Y YRGM LS+G+MI GWD+ GPGLYYVD G RL G FS GSGS YAYGV+DSGY+
Sbjct: 157 NMVYQYRGMDLSMGSMICGWDKKGPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQ 216
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA EL RRAI +AT RD+ SGG+ ++Y++ +GW K+ DV EL + Y
Sbjct: 217 PSLSPEEAYELGRRAITYATHRDSYSGGIINMYHMKEDGWVKVESTDVNELLHQY 271
>gi|972990|gb|AAA75037.1| 20S proteasome subunit Lmp7 [Mus musculus]
Length = 276
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 163/233 (69%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
AP +LP F ++ ++ A GTTTLAF F+ GV+VA DSRA+ G YI
Sbjct: 39 APELALPRGMQPTAFLRSFGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
SS + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 SSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D
Sbjct: 159 MLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI +AT RD SGGV ++Y++ +GW K+ DV +L Y Y
Sbjct: 219 LSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKY 271
>gi|972986|gb|AAA75035.1| 20S proteasome subunit Lmp7 [Mus musculus]
gi|972988|gb|AAA75036.1| 20S proteasome subunit Lmp7 [Mus musculus]
gi|15489383|gb|AAH13785.1| Proteasome (prosome, macropain) subunit, beta type 8 (large
multifunctional peptidase 7) [Mus musculus]
Length = 276
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/235 (54%), Positives = 164/235 (69%), Gaps = 6/235 (2%)
Query: 26 SAAPSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
+ AP +LP F ++ ++ A GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 37 AQAPELALPRGMQPTAFLRSFGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGS 96
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YISS + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+
Sbjct: 97 YISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS 156
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+
Sbjct: 157 NMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYR 216
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
D+S EEA +L RRAI +AT RD SGGV ++Y++ +GW K+ DV +L Y Y
Sbjct: 217 QDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKY 271
>gi|158303322|ref|NP_034854.2| proteasome subunit beta type-8 precursor [Mus musculus]
gi|1172603|sp|P28063.2|PSB8_MOUSE RecName: Full=Proteasome subunit beta type-8; AltName: Full=Low
molecular mass protein 7; AltName: Full=Macropain
subunit C13; AltName: Full=Multicatalytic endopeptidase
complex subunit C13; AltName: Full=Proteasome component
C13; AltName: Full=Proteasome subunit beta-5i; Flags:
Precursor
gi|494969|gb|AAB46392.1| proteasome subunit [Mus musculus]
gi|582390|emb|CAA45779.1| proteasome subunit MC13 [Mus musculus]
gi|972982|gb|AAA75033.1| 20S proteasome subunit Lmp7 [Mus musculus]
gi|972984|gb|AAA75034.1| 20S proteasome subunit Lmp7 [Mus musculus]
gi|2555193|gb|AAB81532.1| 20S proteosome subunit lmp7 [Mus musculus]
gi|26327623|dbj|BAC27555.1| unnamed protein product [Mus musculus]
gi|74177914|dbj|BAE29756.1| unnamed protein product [Mus musculus]
gi|74193489|dbj|BAE20682.1| unnamed protein product [Mus musculus]
gi|74213418|dbj|BAE35524.1| unnamed protein product [Mus musculus]
gi|148678314|gb|EDL10261.1| proteosome (prosome, macropain) subunit, beta type 8 (large
multifunctional peptidase 7) [Mus musculus]
Length = 276
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/235 (54%), Positives = 164/235 (69%), Gaps = 6/235 (2%)
Query: 26 SAAPSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
+ AP +LP F ++ ++ A GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 37 AQAPELALPRGMQPTAFLRSFGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGS 96
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YISS + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+
Sbjct: 97 YISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS 156
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+
Sbjct: 157 NMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYR 216
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
D+S EEA +L RRAI +AT RD SGGV ++Y++ +GW K+ DV +L Y Y
Sbjct: 217 QDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKY 271
>gi|390355470|ref|XP_792356.3| PREDICTED: proteasome subunit beta type-5-like [Strongylocentrotus
purpuratus]
Length = 187
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 144/175 (82%)
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
Y +SQSVKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLA
Sbjct: 8 YAASQSVKKVIEINPYLLGTMAGGAADCAFWERVLAEQCRIYELRNKERISVAAASKLLA 67
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N+LY+Y+GMGLSVGTMI GWD+ GPGLYYVDS+G RL FSVGSGSPYAYGVLD GYK
Sbjct: 68 NMLYNYKGMGLSVGTMICGWDKRGPGLYYVDSDGNRLTNNIFSVGSGSPYAYGVLDEGYK 127
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+++S+E+A +L +RAIYHAT RDA SGGV ++Y++ GW K+S DV +LHY Y
Sbjct: 128 WELSVEDALDLGQRAIYHATHRDAYSGGVVNLYHMQETGWVKISSTDVKDLHYRY 182
>gi|307182515|gb|EFN69722.1| Proteasome subunit beta type-5 [Camponotus floridanus]
Length = 286
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/234 (54%), Positives = 167/234 (71%), Gaps = 8/234 (3%)
Query: 27 AAPSFSLPLST------DFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
A P F P T DE K K H GTTTL F ++ G+++A DSRA+ G +
Sbjct: 42 AVPPFINPAETLGCIAAGTDETGKHLKIKFDH--GTTTLGFRYQGGIVLAVDSRATGGQF 99
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
I S ++KKI+EIN Y+LGT+AGGAADC +W R L +CR++EL N+ RIS+ ASKLL+N
Sbjct: 100 IGSSTMKKIVEINDYLLGTLAGGAADCVYWDRVLARQCRMYELRNRERISIAAASKLLSN 159
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++Y+++GMGLS+G M+AGWD+ GPGLYYVDSEG R G FSVGSGS +A+GVLDSGY++
Sbjct: 160 MIYNFKGMGLSIGMMLAGWDKRGPGLYYVDSEGTRTPGKVFSVGSGSVFAFGVLDSGYRW 219
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
D++ E+A EL RR+IYHAT RDA SGG+ VY++ GW +S D +LHY Y
Sbjct: 220 DLTDEQAYELGRRSIYHATHRDAYSGGIIRVYHMKSTGWVHISDQDSKDLHYAY 273
>gi|219567066|dbj|BAH05051.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/230 (55%), Positives = 164/230 (71%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L+H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAVPVGNEPSGFLRSCNREEGVRIDLEH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
+V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N +RISV ASKLL N++
Sbjct: 64 NVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNSQRISVAAASKLLCNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 124 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 184 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 233
>gi|156096783|ref|XP_001614425.1| 20S proteasome beta subunit [Plasmodium vivax Sal-1]
gi|148803299|gb|EDL44698.1| 20S proteasome beta subunit, putative [Plasmodium vivax]
Length = 273
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/255 (51%), Positives = 175/255 (68%), Gaps = 17/255 (6%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAK------GTTTLAFIFKEGVMVAAD 72
DEL + AP ++P + F KDTK + K GTTTLAF FKEG++VA D
Sbjct: 28 DEL--QFCVAP-VTVPRN-----FIKDTKTKCSNNKLFDFHKGTTTLAFKFKEGIIVAVD 79
Query: 73 SRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVT 132
SRASMG +ISSQ+V+KIIEIN +LGTMAGGAADC +W + LG +++EL N +ISV
Sbjct: 80 SRASMGSFISSQNVEKIIEINKNILGTMAGGAADCLYWEKYLGKIIKIYELRNNEKISVR 139
Query: 133 GASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYG 192
AS +L+NILY Y+G GL G +++G+D TG ++Y+D EG +++G FS GSGS YAY
Sbjct: 140 AASTILSNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYS 199
Query: 193 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK-LSGDDVGELH 251
+LDS Y +++S+E+A ELAR AIYHATFRD SGG V+Y+ NG+ K + G DV ELH
Sbjct: 200 ILDSAYDYNLSLEQAVELARNAIYHATFRDGGSGGKVRVFYIHKNGYDKIIEGQDVYELH 259
Query: 252 YHYYPVTPSTVEQEM 266
YHY P+ +Q +
Sbjct: 260 YHY--TNPAQNDQHV 272
>gi|219567058|dbj|BAH05047.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/230 (55%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSELIHRY 270
>gi|219567024|dbj|BAH05030.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 275
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/230 (55%), Positives = 164/230 (71%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L+H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLEH--GTTTLAFKFRHGVIVAVDSRASAGQYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
+V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N +RISV ASKLL N++
Sbjct: 101 NVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNSQRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 270
>gi|348575985|ref|XP_003473768.1| PREDICTED: proteasome subunit beta type-8-like [Cavia porcellus]
Length = 273
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 164/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
AP ++P EF ++ ++ A GTTTLAF F+ GV+VA DSRA+ G YI
Sbjct: 36 APELAVPRGMQPTEFLQSLGRDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGNYI 95
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
S+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLLAN+
Sbjct: 96 STIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLANM 155
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYV+ +G RL G FS GSG+ YAYGVLDSGY+ D
Sbjct: 156 MSQYRGMGLSMGSMIIGWDKKGPGLYYVNEDGTRLPGHMFSSGSGNTYAYGVLDSGYRPD 215
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI AT RD SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 216 LSPEEAYDLGRRAIVQATHRDNYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 268
>gi|355561577|gb|EHH18209.1| hypothetical protein EGK_14764 [Macaca mulatta]
Length = 276
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 164/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + + A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGEGEGNVQIDMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|84998356|ref|XP_953899.1| 20S proteasome beta 5 subunit [Theileria annulata]
gi|65304897|emb|CAI73222.1| 20S proteasome beta 5 subunit, putative [Theileria annulata]
Length = 270
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 157/212 (74%), Gaps = 1/212 (0%)
Query: 44 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGG 103
++ + KGTTTL FIF +GV++A DSRASMG +S+Q+V K+IEIN Y+LGTMAGG
Sbjct: 44 QEARNVKNFKKGTTTLGFIFDQGVILAVDSRASMGPIVSTQNVSKVIEINSYLLGTMAGG 103
Query: 104 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 163
AADC +W R+L CRLHEL N+ RISV AS++LANI Y ++G GLS GTMIAG+D G
Sbjct: 104 AADCSYWERHLAKLCRLHELRNQCRISVGAASQILANIFYYFKGYGLSAGTMIAGYDLNG 163
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
PGLYYV SEG R+KG FSVGSGS +AYGV+D GY+ +M++EEA EL RAIY A RD
Sbjct: 164 PGLYYVSSEGERVKGKLFSVGSGSLFAYGVIDQGYRSNMTLEEAVELGTRAIYQAGHRDG 223
Query: 224 ASGGVASVYYVGPNGWKKL-SGDDVGELHYHY 254
SGG ++Y+V +GW K+ D+ ELHY Y
Sbjct: 224 FSGGFVNLYHVHKDGWTKIVDRRDINELHYLY 255
>gi|444321162|ref|XP_004181237.1| hypothetical protein TBLA_0F01760 [Tetrapisispora blattae CBS 6284]
gi|387514281|emb|CCH61718.1| hypothetical protein TBLA_0F01760 [Tetrapisispora blattae CBS 6284]
Length = 287
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/229 (56%), Positives = 165/229 (72%), Gaps = 8/229 (3%)
Query: 28 APSFSLPLSTDFDEF-------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
APS ++P + EF K+ T+K A GTTTLAF FK G++VA DSRA+ G +
Sbjct: 41 APSIAMPPISTPQEFLRAHTDDSKNPDCTIKIAHGTTTLAFRFKGGIVVAVDSRATAGNW 100
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV ASK+L+N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 141 ILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLDS YK
Sbjct: 161 LVYQYKGAGLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVLDSNYK 220
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVG 248
+D+++EEA L +R+I AT RDA SGG ++Y+V NGW DVG
Sbjct: 221 WDLTVEEALYLGKRSILAATHRDAYSGGSINLYHVTENGWIYHGNHDVG 269
>gi|74222319|dbj|BAE26960.1| unnamed protein product [Mus musculus]
Length = 276
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 164/235 (69%), Gaps = 6/235 (2%)
Query: 26 SAAPSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
+ AP +LP F ++ ++ A GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 37 AQAPELALPRGMQPTAFLRSFGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGS 96
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YISS + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RIS++ ASKLL+
Sbjct: 97 YISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISMSAASKLLS 156
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+
Sbjct: 157 NMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYR 216
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
D+S EEA +L RRAI +AT RD SGGV ++Y++ +GW K+ DV +L Y Y
Sbjct: 217 QDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKY 271
>gi|220881|dbj|BAA01572.1| proteasome subunit RC1 [Rattus sp.]
Length = 208
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/206 (60%), Positives = 156/206 (75%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTLAF F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G AADCQ+W R
Sbjct: 2 AHGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWER 61
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD
Sbjct: 62 LLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDN 121
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G RL G FS GSG+ YAYGV+DSGY+ D+S EEA +LARRAI +AT RD+ SGGV ++Y
Sbjct: 122 GTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMY 181
Query: 233 YVGPNGWKKLSGDDVGELHYHYYPVT 258
++ +GW K+ DV +L + Y T
Sbjct: 182 HMKKDGWVKVESTDVSDLLHKYREAT 207
>gi|219567026|dbj|BAH05031.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/230 (55%), Positives = 163/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L+H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAVPVGNEPSGFLRSCNREEGVRIDLEH--GTTTLAFKFRHGVIVAVDSRASAGQYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N +RISV ASKLL N++
Sbjct: 64 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNQRISVAAASKLLCNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 124 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 184 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 233
>gi|596142|gb|AAA56778.1| proteasome subunit LMP7 [Homo sapiens]
Length = 276
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/256 (52%), Positives = 173/256 (67%), Gaps = 10/256 (3%)
Query: 9 ESTSPFFGSGDEL-CPELS---AAPSFSLPLSTDFDEFQK------DTKATLKHAKGTTT 58
ES P GSG P+ S +P +LP EF + + ++ A GTTT
Sbjct: 16 ESALPVAGSGRRSDRPDYSFSMRSPELALPRGMQPTEFFQSLGGDGERNVQIEMAHGTTT 75
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G AADCQ+W R L +C
Sbjct: 76 LAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKEC 135
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G
Sbjct: 136 RLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSG 195
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD+ SGGV ++Y++ +G
Sbjct: 196 NMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDG 255
Query: 239 WKKLSGDDVGELHYHY 254
W K+ DV +L + Y
Sbjct: 256 WVKVESTDVSDLLHQY 271
>gi|73747875|ref|NP_683720.2| proteasome subunit beta type-8 isoform E2 proprotein [Homo sapiens]
gi|334302881|sp|P28062.3|PSB8_HUMAN RecName: Full=Proteasome subunit beta type-8; AltName: Full=Low
molecular mass protein 7; AltName: Full=Macropain
subunit C13; AltName: Full=Multicatalytic endopeptidase
complex subunit C13; AltName: Full=Proteasome component
C13; AltName: Full=Proteasome subunit beta-5i; AltName:
Full=Really interesting new gene 10 protein; Flags:
Precursor
gi|38482|emb|CAA78706.1| proteasome subunit LMP7 [Homo sapiens]
gi|1054747|emb|CAA60787.1| LMP7 [Homo sapiens]
gi|119624050|gb|EAX03645.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7), isoform CRA_b [Homo
sapiens]
gi|208967166|dbj|BAG73597.1| proteasome (prosome, macropain) subunit beta type 8 [synthetic
construct]
Length = 276
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 133/256 (51%), Positives = 172/256 (67%), Gaps = 10/256 (3%)
Query: 9 ESTSPFFGSGDELCPELSA----APSFSLPLSTDFDEFQK------DTKATLKHAKGTTT 58
ES P GSG P + +P +LP EF + + ++ A GTTT
Sbjct: 16 ESALPVAGSGRRSDPGHYSFSMRSPELALPRGMQPTEFFQSLGGDGERNVQIEMAHGTTT 75
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G AADCQ+W R L +C
Sbjct: 76 LAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKEC 135
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G
Sbjct: 136 RLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSG 195
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD+ SGGV ++Y++ +G
Sbjct: 196 NMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDG 255
Query: 239 WKKLSGDDVGELHYHY 254
W K+ DV +L + Y
Sbjct: 256 WVKVESTDVSDLLHQY 271
>gi|355766753|gb|EHH62548.1| hypothetical protein EGM_20930 [Macaca fascicularis]
Length = 276
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 164/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGEGNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 DTLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|395832108|ref|XP_003789118.1| PREDICTED: proteasome subunit beta type-8 [Otolemur garnettii]
Length = 276
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 165/236 (69%), Gaps = 10/236 (4%)
Query: 28 APSFSLPLSTDFDEF--------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
+P +LP EF +KD + + H GTTTLAF F+ GV+VA DSRAS G
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDREKDIQIEMAH--GTTTLAFKFQHGVIVAVDSRASAGN 96
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI + V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+
Sbjct: 97 YIDTLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS 156
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++ YRGMGLS+G+MI GWD+ GPGLYYV+ G RL G FS GSG+ YAYGV+DSGY
Sbjct: 157 NMMCQYRGMGLSMGSMICGWDKKGPGLYYVNENGTRLSGNMFSTGSGNTYAYGVMDSGYL 216
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYY 255
+++ +EA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y+
Sbjct: 217 LNLTPQEAYDLGRRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYW 272
>gi|383420117|gb|AFH33272.1| proteasome subunit beta type-8 isoform E2 proprotein [Macaca
mulatta]
Length = 276
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 164/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGEGNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 DTLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|219567022|dbj|BAH05029.1| proteasome subunit, beta type 8, partial [Oryzias sarasinorum]
Length = 275
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSAFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGKYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY+ DM++
Sbjct: 161 YRGMGLSIGSMICGWDKEGPGLYYVDENGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSELIHRY 270
>gi|596140|gb|AAA56777.1| proteasome subunit LMP7 [Homo sapiens]
Length = 276
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/256 (52%), Positives = 173/256 (67%), Gaps = 10/256 (3%)
Query: 9 ESTSPFFGSGDEL-CPELS---AAPSFSLPLSTDFDEFQK------DTKATLKHAKGTTT 58
ES P GSG P+ S +P +LP EF + + ++ A GTTT
Sbjct: 16 ESALPVAGSGRRSDRPDYSFSMRSPELALPRGMKPTEFFQSLGGDGERNVQIEMAHGTTT 75
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G AADCQ+W R L +C
Sbjct: 76 LAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKEC 135
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G
Sbjct: 136 RLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSG 195
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD+ SGGV ++Y++ +G
Sbjct: 196 NMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDG 255
Query: 239 WKKLSGDDVGELHYHY 254
W K+ DV +L + Y
Sbjct: 256 WVKVESTDVSDLLHQY 271
>gi|315518860|dbj|BAJ51759.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 275
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPIGNEPSAFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGKYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY+ DM++
Sbjct: 161 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWVKVCKEDVSELIHRY 270
>gi|297290551|ref|XP_001115562.2| PREDICTED: proteasome subunit beta type-8-like [Macaca mulatta]
Length = 276
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 163/233 (69%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + + A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGERNVQIDMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 GALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|219567018|dbj|BAH05027.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 275
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPIGNEPSAFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGKYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY+ DM++
Sbjct: 161 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWVKVCKEDVSELIHRY 270
>gi|385303474|gb|EIF47547.1| proteasome component pre2 precursor [Dekkera bruxellensis AWRI1499]
Length = 284
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 172/239 (71%), Gaps = 8/239 (3%)
Query: 19 DELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
D + P +S + P+ L +TD D D K + H GTTTLAF FKEG++VA DSR
Sbjct: 35 DNMSPSISLPPISKPTAFLRANTD-DSVNPDCKIKIAH--GTTTLAFRFKEGIIVAVDSR 91
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G +++SQ+VKK+IEINP +LGTMAGGAADCQ+W LG +CRLHEL NK RISV A
Sbjct: 92 ATAGSWVASQTVKKVIEINPMLLGTMAGGAADCQYWETWLGTQCRLHELRNKERISVAAA 151
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGV 193
SK+L+N++YSY+GMGLS+GTMI G+ + GP +YYVDS+G R+KG FSVGSG +AYGV
Sbjct: 152 SKILSNLVYSYKGMGLSMGTMICGYTPKEGPTIYYVDSDGTRVKGNIFSVGSGQTFAYGV 211
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+D+ Y++D+S++EA L +RAI AT RDA SGG ++Y+V GW +VG L +
Sbjct: 212 MDANYRWDLSVDEALYLGKRAILAATHRDAYSGGSINLYHVTEKGWVYHGNYNVGPLFW 270
>gi|219567020|dbj|BAH05028.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
gi|315518869|dbj|BAJ51765.1| proteasome subunit, beta type 8 [Oryzias matanensis]
gi|315518878|dbj|BAJ51771.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 275
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 163/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSAFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGKYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVSAASKLLSNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY+ DM++
Sbjct: 161 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSELIHRY 270
>gi|402866606|ref|XP_003897470.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Papio anubis]
Length = 276
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/233 (54%), Positives = 164/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + + A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGEGNVQIDMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI HAT RD+ SGG+ ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIAHATHRDSYSGGIVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|315518891|dbj|BAJ51778.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 238
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL N++
Sbjct: 64 DANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 124 YRGMGLSMGSMICGWDKEGPGLYYVDHNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV EL + Y
Sbjct: 184 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSELIHRY 233
>gi|146165617|ref|XP_001015486.2| proteasome, putative [Tetrahymena thermophila]
gi|146145426|gb|EAR95241.2| proteasome, putative [Tetrahymena thermophila SB210]
Length = 297
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 162/214 (75%), Gaps = 6/214 (2%)
Query: 47 KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD 106
++ ++ KGTTTLAF F+ GV+VA DSRAS G + +S++V+KIIEIN +LGTMAGGAAD
Sbjct: 66 RSLMEFKKGTTTLAFKFQGGVIVAVDSRASQGSFDASETVRKIIEINDQLLGTMAGGAAD 125
Query: 107 CQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGL 166
CQFW + L I+CR ++L N+ ++SV AS++L NILYSYR GLS+G M+ GWD G L
Sbjct: 126 CQFWEQYLAIECRKYQLQNREKVSVAAASRILINILYSYRNHGLSMGCMLTGWDHEGAQL 185
Query: 167 YYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
YY+D++G R+KG FS GSGS YAYGVLD+ Y +++S++EAAEL R+AIYHAT RDA SG
Sbjct: 186 YYLDNDGQRIKGNIFSCGSGSTYAYGVLDNEYHYNLSVKEAAELGRKAIYHATHRDAGSG 245
Query: 227 GVASVYYV-GPN----GWKKL-SGDDVGELHYHY 254
GV +Y+V PN GW + G+DV +LHY Y
Sbjct: 246 GVVRIYHVHAPNAQGKGWTIIEDGEDVNKLHYFY 279
>gi|219567050|dbj|BAH05043.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAVPVGNEPSSFLRSCNREEGVRIDLDH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 64 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 124 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 184 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 233
>gi|338718017|ref|XP_003363742.1| PREDICTED: proteasome subunit beta type-8-like isoform 2 [Equus
caballus]
Length = 208
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/202 (59%), Positives = 154/202 (76%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTLAF F+ GV+VA DSRAS G YI + +++IEINPY+LGTM+G AADCQ+W R
Sbjct: 2 AHGTTTLAFKFQHGVIVAVDSRASAGSYIGECASQQVIEINPYLLGTMSGCAADCQYWER 61
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD
Sbjct: 62 LLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDEN 121
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G RL G FS GSG+ YAYGV+DSGY+ ++SIEEA +L RRAI HAT RD+ SGGV ++Y
Sbjct: 122 GTRLSGNMFSTGSGNSYAYGVMDSGYRNNLSIEEAYDLGRRAIVHATHRDSYSGGVVNMY 181
Query: 233 YVGPNGWKKLSGDDVGELHYHY 254
++ +GW K+ DV +L + Y
Sbjct: 182 HMKEDGWVKVESTDVSDLLHQY 203
>gi|219567052|dbj|BAH05044.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 163/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAVPVGNEPSSFLRSCNREEGVRIDLDH--GTTTLAFKFRHGVIVAVDSRASAGKYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
+V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 64 NVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 124 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 184 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 233
>gi|114606757|ref|XP_001167272.1| PREDICTED: proteasome subunit beta type-8 isoform 3 [Pan
troglodytes]
gi|410220158|gb|JAA07298.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410257298|gb|JAA16616.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410287540|gb|JAA22370.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410332767|gb|JAA35330.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
Length = 276
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 126/233 (54%), Positives = 164/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+ A DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
S+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 SALRVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI +AT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|315518872|dbj|BAJ51767.1| proteasome subunit, beta type 8 [Oryzias matanensis]
Length = 272
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 40 FAVPIGNEPSAFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 97
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL+N++
Sbjct: 98 DANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNMMLG 157
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 158 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 217
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 218 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSKLIHRY 267
>gi|315518863|dbj|BAJ51761.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 272
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 40 FAVPVGNEPSAFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 97
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL+N++
Sbjct: 98 DANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNMMLG 157
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 158 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 217
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 218 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSKLIHRY 267
>gi|254580841|ref|XP_002496406.1| ZYRO0C17688p [Zygosaccharomyces rouxii]
gi|238939297|emb|CAR27473.1| ZYRO0C17688p [Zygosaccharomyces rouxii]
Length = 287
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/237 (55%), Positives = 167/237 (70%), Gaps = 6/237 (2%)
Query: 21 LCPELSAAPSFSLP---LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASM 77
L P +S AP S P L D+ K+ +K A GTTTLAF F+ G++VA DSRAS
Sbjct: 40 LAPSISMAP-ISTPQQFLRAHTDD-SKNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRASA 97
Query: 78 GGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKL 137
G +++SQ+VKK+IEINP++LGTMAGGAADCQ+W LG +CRLHEL K RISV ASK+
Sbjct: 98 GSWVASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGAQCRLHELKEKERISVAAASKI 157
Query: 138 LANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDS 196
L N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLDS
Sbjct: 158 LCNLVYEYKGYGLSMGTMICGYTKKEGPTVYYVDSDGTRLKGDIFCVGSGQTFAYGVLDS 217
Query: 197 GYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
YK+D+S+EEA L +R+I AT RDA SGG ++Y+V NGW DVGE +
Sbjct: 218 NYKWDLSVEEALYLGKRSIIAATHRDAYSGGSVNLYHVTENGWVFHGNHDVGETFWQ 274
>gi|2654060|gb|AAB87680.1| proteasome subunit X [Danio rerio]
Length = 218
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 162/217 (74%), Gaps = 10/217 (4%)
Query: 6 SGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKE 65
GL T+ FG+ L +P+F++ + DE ++ ++ GTTTLAF F+
Sbjct: 12 CGLNQTNLGFGAA------LGDSPNFAVKTLGEDDEPER----KIEFLHGTTTLAFKFQH 61
Query: 66 GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELAN 125
GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL N
Sbjct: 62 GVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRN 121
Query: 126 KRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGS 185
K RISV ASKLLAN++Y Y+GMGLS+GTM+ GWD+ GPGLYYVDSEG R+ G F+VGS
Sbjct: 122 KERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGDLFAVGS 181
Query: 186 GSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GS YAYGV+DSG ++D++I+EA +L RR IY AT+RD
Sbjct: 182 GSMYAYGVVDSGLRYDLTIDEACDLGRRGIYQATYRD 218
>gi|126136741|ref|XP_001384894.1| hypothetical protein PICST_36375 [Scheffersomyces stipitis CBS
6054]
gi|126092116|gb|ABN66865.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 282
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 167/238 (70%), Gaps = 8/238 (3%)
Query: 23 PELSAAPSFSLP---LSTDFDEFQKDTKAT----LKHAKGTTTLAFIFKEGVMVAADSRA 75
P+L AP+ LP TDF D + +K A GTTTLAF F+ G++VA DSRA
Sbjct: 31 PQLELAPTIQLPPISQPTDFLRAHTDDASNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRA 90
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +I+SQ+V K+I INP++LGTMAGGAADCQ+W LG +CRLHEL K RISV AS
Sbjct: 91 TQGNWIASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAAS 150
Query: 136 KLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L N++Y Y+GMGLS+GTM+ G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 151 KILGNLVYEYKGMGLSMGTMVCGYTKKEGPTIYYVDSDGSRLKGDLFCVGSGQTFAYGVL 210
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+++EEA L +R+I AT RDA SGG ++Y+V NGW +VG++ +
Sbjct: 211 DSEYKWDLTVEEALYLGKRSILAATHRDAYSGGSVNLYHVTENGWIYHGNHNVGDIFW 268
>gi|30802211|gb|AAH51450.1| Proteasome (prosome, macropain) subunit, beta type 8 (large
multifunctional peptidase 7) [Mus musculus]
Length = 276
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 162/235 (68%), Gaps = 6/235 (2%)
Query: 26 SAAPSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
+ AP +LP F ++ ++ A GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 37 AQAPELALPRGMQPTAFLRSFGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGS 96
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YISS + K+IEINPY+LGTM+G AADCQ+W R L +CRL L N RISV+ ASKLL+
Sbjct: 97 YISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLCYLRNGERISVSAASKLLS 156
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G F GSG+ YAYGV+DSGY+
Sbjct: 157 NMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFPTGSGNTYAYGVMDSGYR 216
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
D+S EEA +L RRAI +AT RD SGGV ++Y++ +GW K+ DV +L Y Y
Sbjct: 217 QDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKY 271
>gi|219567046|dbj|BAH05041.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAVPVGNEPSSFLRSCNREEGVRIDLDH--GTTTLAFKFRHGVIVAVDSRASAGKYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 64 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 124 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 184 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 233
>gi|315518881|dbj|BAJ51773.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 272
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y+ S
Sbjct: 40 FAVPIGNEPSAFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLDSN 97
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL+N++
Sbjct: 98 DANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNMMLG 157
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 158 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 217
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 218 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSKLIHRY 267
>gi|389583316|dbj|GAB66051.1| 20S proteasome beta subunit, partial [Plasmodium cynomolgi strain
B]
Length = 268
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 163/228 (71%), Gaps = 7/228 (3%)
Query: 42 FQKDTKAT----LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYML 97
F KDTK KGTTTLAF FK+G++VA DSRASMG +ISSQ+V+KIIEIN +L
Sbjct: 42 FIKDTKTKNNKLFDFHKGTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIEINKNIL 101
Query: 98 GTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIA 157
GTMAGGAADC +W + LG +++EL N +ISV AS +L+NILY Y+G GL G +++
Sbjct: 102 GTMAGGAADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILS 161
Query: 158 GWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYH 217
G+D TG ++Y+D EG +++G FS GSGS YAY +LDS Y +++++E+A ELAR AIYH
Sbjct: 162 GYDHTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLNLEQAVELARNAIYH 221
Query: 218 ATFRDAASGGVASVYYVGPNGWKK-LSGDDVGELHYHYYPVTPSTVEQ 264
ATFRD SGG V+Y+ NG+ K + G DV ELHYHY P+ +Q
Sbjct: 222 ATFRDGGSGGKVRVFYIHKNGYDKIIEGQDVYELHYHY--TNPAQNDQ 267
>gi|256085670|ref|XP_002579037.1| proteasome catalytic subunit 3 (T01 family) [Schistosoma mansoni]
gi|360043676|emb|CCD81222.1| proteasome catalytic subunit 3 (T01 family) [Schistosoma mansoni]
Length = 518
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 153/203 (75%), Gaps = 4/203 (1%)
Query: 44 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGG 103
K+TK H GTTTLA + GV+VA DSRA+ G YI+S + KKIIEIN Y+LGTMAGG
Sbjct: 53 KETKINFFH--GTTTLALKYSGGVIVATDSRATAGPYIASGTTKKIIEINKYLLGTMAGG 110
Query: 104 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 163
AADCQFW R L CRL EL NK RISV ASKLLANI+Y+Y+GMGLS+GT I GWD+ G
Sbjct: 111 AADCQFWERVLAKHCRLFELRNKERISVAAASKLLANIVYNYKGMGLSIGTTIVGWDKNG 170
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
G+YYVD++G R G FSVGSGSPYAYGVLD+GYK++MS E+A ELARR+I+HAT RDA
Sbjct: 171 SGIYYVDTDGNRTPGNLFSVGSGSPYAYGVLDTGYKYEMSDEDAYELARRSIFHATHRDA 230
Query: 224 ASGGVASVYYVGP--NGWKKLSG 244
ASGG + + P W ++G
Sbjct: 231 ASGGFVNPQFDLPRFRQWDNITG 253
>gi|187109138|ref|NP_001119673.1| 20S proteasome beta5 subunit [Acyrthosiphon pisum]
gi|89473784|gb|ABD72704.1| putative 20S proteasome beta5 subunit [Acyrthosiphon pisum]
gi|239788834|dbj|BAH71078.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788836|dbj|BAH71079.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788838|dbj|BAH71080.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788840|dbj|BAH71081.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788844|dbj|BAH71083.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788851|dbj|BAH71084.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788853|dbj|BAH71085.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788861|dbj|BAH71089.1| ACYPI000065 [Acyrthosiphon pisum]
Length = 276
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 166/227 (73%), Gaps = 2/227 (0%)
Query: 25 LSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
L P ++ + T D + + H GTTTL F+++ G+++A DSRA+ G YI SQ
Sbjct: 44 LPGNPVENMRMITARDTMGRPIELNFHH--GTTTLGFLYQGGIVLAVDSRATGGQYIGSQ 101
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISVT ASK+++N++Y
Sbjct: 102 CMKKIVEINDFMLGTLAGGAADCVYWDRVLSKQCRLHELRNKERISVTAASKIMSNMIYY 161
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
Y+G GLS+G M+AG+D+ GP L+Y+D++G R G FSVGSGS YA+GVLDSGYK+D++
Sbjct: 162 YKGYGLSIGMMLAGYDKNGPSLFYIDNDGSRTPGKVFSVGSGSIYAFGVLDSGYKWDLTD 221
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
EEA +L +RAI+HAT RDA SGG+ VY++ +GWK + +D E++
Sbjct: 222 EEAQKLGQRAIFHATHRDAYSGGIVRVYHITKDGWKHIKNEDCDEIY 268
>gi|673450|emb|CAA45780.1| proteasome subunit MC13 [Mus musculus]
Length = 208
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/202 (60%), Positives = 153/202 (75%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTLAF F+ GV+VA DSRA+ G YISS + K+IEINPY+LGTM+G AADCQ+W R
Sbjct: 2 AHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWER 61
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD
Sbjct: 62 LLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDN 121
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G RL G FS GSG+ YAYGV+DSGY+ D+S EEA +L RRAI +AT RD SGGV ++Y
Sbjct: 122 GTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMY 181
Query: 233 YVGPNGWKKLSGDDVGELHYHY 254
++ +GW K+ DV +L Y Y
Sbjct: 182 HMKEDGWVKVESSDVSDLLYKY 203
>gi|242011050|ref|XP_002426270.1| proteasome subunit beta type 5 precursor, putative [Pediculus
humanus corporis]
gi|212510333|gb|EEB13532.1| proteasome subunit beta type 5 precursor, putative [Pediculus
humanus corporis]
Length = 271
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 165/236 (69%), Gaps = 5/236 (2%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
+++C + P + P + QK K + H GTTTL F FK GV++A DSRA+ G
Sbjct: 32 NQMCL---SVPPYENPNQKLHELRQKGLKIDIDH--GTTTLGFRFKNGVILAVDSRATGG 86
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
I SQ++KKI+EIN Y+LGT+AGGAADC +W R L +CR+ EL N RISV ASKL+
Sbjct: 87 QCIGSQTMKKIVEINNYLLGTLAGGAADCVYWDRVLAKQCRMFELRNHERISVAAASKLM 146
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
N++Y+Y+GMGLS+G MIAGWD+ G LYYV +G R G FSVGSGS YA+GVLD+GY
Sbjct: 147 TNMVYNYKGMGLSMGMMIAGWDKRGASLYYVSDDGTRTSGNVFSVGSGSIYAFGVLDTGY 206
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
K+D+ +EA +LA+R+IYHAT+RDA SGG+ VY++ GW +S D ELHY Y
Sbjct: 207 KWDLEDKEAYDLAQRSIYHATYRDAYSGGIIRVYHIKETGWVNISEIDCKELHYKY 262
>gi|327289964|ref|XP_003229694.1| PREDICTED: proteasome subunit beta type-8-like [Anolis
carolinensis]
Length = 230
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/202 (60%), Positives = 154/202 (76%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTLAF F+ GV+VA DSRAS G YI++ K+IEINPY+LGTM+G AADCQ+W R
Sbjct: 24 AHGTTTLAFTFQHGVIVATDSRASAGNYIATLLCNKVIEINPYLLGTMSGCAADCQYWER 83
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
L +CRL+ L NK RISV+ ASKLLAN+L YRGMGLSVG+M+ GWD+ GPGLYY+D
Sbjct: 84 LLAKQCRLYYLRNKERISVSAASKLLANMLCEYRGMGLSVGSMVCGWDKKGPGLYYIDDN 143
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G RL G FS GSG+ YAYGVLDSG++ D+++EEA +L R+AI +AT RDA SGGV ++Y
Sbjct: 144 GVRLSGPLFSTGSGNTYAYGVLDSGHRPDLTVEEAYDLGRKAISYATHRDAYSGGVVNMY 203
Query: 233 YVGPNGWKKLSGDDVGELHYHY 254
++ +GW ++ DV EL Y
Sbjct: 204 HMKEDGWIRVGRTDVSELLSQY 225
>gi|219567014|dbj|BAH05025.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 272
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 40 FAVPIGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 97
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL N++
Sbjct: 98 DANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNMMLG 157
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 158 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 217
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 218 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSKLIHRY 267
>gi|426352663|ref|XP_004043829.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Gorilla
gorilla gorilla]
Length = 276
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/233 (54%), Positives = 164/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+ A DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
S+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 SALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI +AT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|219567036|dbj|BAH05036.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAVPVGNEPSSFLRSCNREEGVRIDLDH--GTTTLAFRFRHGVIVAVDSRASAGKYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 64 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 124 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 184 EEAYELGCRGIAHATHRDAYSGGSINMYHMREDGWIKVCKEDVSDLIHRY 233
>gi|441594219|ref|XP_003272205.2| PREDICTED: proteasome subunit beta type-8 isoform 1 [Nomascus
leucogenys]
Length = 276
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 163/233 (69%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+ K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 DTLRTNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSIGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI +AT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|225710552|gb|ACO11122.1| Proteasome subunit beta type-5 precursor [Caligus rogercresseyi]
Length = 278
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 154/204 (75%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTL F ++ G ++A DSRA+ GGY+ S SV+KIIE++ Y+L TMAGGAADC +W R
Sbjct: 68 AHGTTTLGFKYEGGTILAVDSRATSGGYVGSGSVRKIIEVSDYLLATMAGGAADCTYWDR 127
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
L ++CRL+EL N RISV ASKLLAN Y Y+GMGLS+G MIAG+D+ GP LYYVDSE
Sbjct: 128 VLAMECRLYELRNHCRISVAAASKLLANNAYRYKGMGLSMGAMIAGYDKRGPELYYVDSE 187
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G R G FSVGSGS YAYGVLD+ Y++D++ EEA EL RRAI HAT+RDAASGG+ V
Sbjct: 188 GSRTPGNLFSVGSGSVYAYGVLDADYRYDLTDEEAYELGRRAIAHATYRDAASGGIIRVM 247
Query: 233 YVGPNGWKKLSGDDVGELHYHYYP 256
+V G K +S +D ELHY Y P
Sbjct: 248 HVTKEGKKMISEEDCKELHYKYLP 271
>gi|160331155|ref|XP_001712285.1| prsB5 [Hemiselmis andersenii]
gi|159765732|gb|ABW97960.1| prsB5 [Hemiselmis andersenii]
Length = 219
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/202 (56%), Positives = 155/202 (76%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF+ + G++V+ DSRASMG YI S +V+K+I IN YMLGTMAGGAADC FW RNL
Sbjct: 17 GTTTLAFVCQSGIIVSVDSRASMGKYIGSSNVRKVIPINDYMLGTMAGGAADCFFWERNL 76
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
GI C L+EL N+ +IS++GASK+ N++Y Y+ GLS+G MI GWD+TGPGL+YVDSE
Sbjct: 77 GIICHLYELQNQHKISISGASKIFTNMIYKYKNSGLSIGAMIIGWDQTGPGLFYVDSEAN 136
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+K SVGSGS +A+G+LDSGYK+++S++E EL + +I+HA F+DA SGG + Y V
Sbjct: 137 RIKIKMISVGSGSTFAFGILDSGYKWNLSLKEGIELGKNSIFHAAFKDAYSGGKINSYLV 196
Query: 235 GPNGWKKLSGDDVGELHYHYYP 256
NGW K++ +D+G+ + Y
Sbjct: 197 RNNGWIKIASEDIGKEFFLKYK 218
>gi|219567048|dbj|BAH05042.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/228 (55%), Positives = 159/228 (69%), Gaps = 1/228 (0%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A P + PLS ++ + GTTTLAF F+ GV+VA DSRAS G Y++S V
Sbjct: 7 AVPVGNEPLSF-LRSCNREEGVRIDLDHGTTTLAFKFRHGVIVAVDSRASAGKYLASNDV 65
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++ YR
Sbjct: 66 NKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLGYR 125
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++EE
Sbjct: 126 GMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEE 185
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 186 AYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 233
>gi|395728689|ref|XP_002809170.2| PREDICTED: proteasome subunit beta type-8 isoform 1 [Pongo abelii]
Length = 276
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 165/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYV+ G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVNEHGTRLSGNMFSTGSGNAYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI +AT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|219567044|dbj|BAH05040.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAVPVGNEPSSFLRSCNREEGVRIDLDH--GTTTLAFRFRHGVIVAVDSRASAGNYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 64 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
Y+GMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 124 YKGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 184 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 233
>gi|397474367|ref|XP_003808653.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Pan paniscus]
Length = 276
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 164/233 (70%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+ A DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
S+ + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 SALRMNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDQHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI +AT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|219567028|dbj|BAH05032.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L+H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAIPVGNEPSGFLRSCNREEGVRIDLEH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ W R L +CRL++L N +RISV ASKLL N++
Sbjct: 64 DANKVIEINPYLLGTMSGSAADCQHWERLLAKECRLYKLRNNQRISVAAASKLLCNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 124 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 184 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSKLIHRY 233
>gi|219567064|dbj|BAH05050.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 272
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 40 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 97
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL N++
Sbjct: 98 DANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNMMLG 157
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 158 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 217
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 218 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSKLIHRY 267
>gi|195429280|ref|XP_002062691.1| GK19557 [Drosophila willistoni]
gi|194158776|gb|EDW73677.1| GK19557 [Drosophila willistoni]
Length = 362
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/232 (53%), Positives = 160/232 (68%), Gaps = 1/232 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P +AP F P + + + + A GTTTL FIF+ GV++ ADSRA+ G YI
Sbjct: 40 PYALSAPPFEQP-AENLPKLLAHCNIQMDFAHGTTTLGFIFRNGVILCADSRATSGQYIG 98
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ++KKI+E+N YMLGT+AGGAADC +W R L +CRLHEL KRR++V A++ + NI
Sbjct: 99 SQTMKKIVELNDYMLGTLAGGAADCVYWDRVLARECRLHELRFKRRMTVDTAARRMCNIS 158
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+GMGL +G M+AG+D GP L YVDSEG R FSVGSGSPYA GVLD+GYK+D+
Sbjct: 159 AEYKGMGLVMGMMLAGYDNDGPKLIYVDSEGMRSHANVFSVGSGSPYALGVLDTGYKWDI 218
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+ +EA +LARRAIYHAT +DA SGG+ +Y++ GWK + D ELH Y
Sbjct: 219 TDQEAYDLARRAIYHATSKDAYSGGIVRLYHITEKGWKNVGNTDCWELHEQY 270
>gi|260947704|ref|XP_002618149.1| proteasome component PRE2 precursor [Clavispora lusitaniae ATCC
42720]
gi|238848021|gb|EEQ37485.1| proteasome component PRE2 precursor [Clavispora lusitaniae ATCC
42720]
Length = 282
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 169/238 (71%), Gaps = 8/238 (3%)
Query: 23 PELSAAPSFSLPLSTDFDEF-------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
P+L+ APS +P + EF K+ +K A GTTTLAF F+ G++VA DSRA
Sbjct: 31 PQLALAPSIQVPPISHPTEFLRAHTDDSKNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRA 90
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+V K+I INP++LGTMAGGAADCQ+W LG +CRLHEL K RISV AS
Sbjct: 91 TAGNWVASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAAS 150
Query: 136 KLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L N++Y+Y+GMGLS+GTM+ G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 151 KILGNLVYNYKGMGLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVL 210
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+S+E+A L +R+I AT RDA SGG ++Y+V +GW +VG++ Y
Sbjct: 211 DSEYKWDLSVEDALYLGKRSILAATHRDAYSGGSINLYHVTESGWVYHGNHNVGDIFY 268
>gi|219567030|dbj|BAH05033.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 275
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSSFLRSCDREEGVRIELDH--GTTTLAFKFRHGVIVAVDSRASAGKYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY+ DM++
Sbjct: 161 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 270
>gi|114606761|ref|XP_001167241.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pan
troglodytes]
gi|410220160|gb|JAA07299.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410257296|gb|JAA16615.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410287542|gb|JAA22371.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410332769|gb|JAA35331.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
Length = 272
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 156/210 (74%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ ++ A GTTTLAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G A
Sbjct: 58 ERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGSA 117
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GP
Sbjct: 118 ADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGP 177
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
GLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD+
Sbjct: 178 GLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSY 237
Query: 225 SGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 238 SGGVVNMYHMKEDGWVKVESTDVSDLLHQY 267
>gi|68482384|ref|XP_714824.1| hypothetical protein CaO19.2233 [Candida albicans SC5314]
gi|68482509|ref|XP_714764.1| hypothetical protein CaO19.9775 [Candida albicans SC5314]
gi|46436357|gb|EAK95720.1| hypothetical protein CaO19.9775 [Candida albicans SC5314]
gi|46436420|gb|EAK95782.1| hypothetical protein CaO19.2233 [Candida albicans SC5314]
gi|238883580|gb|EEQ47218.1| proteasome component PRE2 precursor [Candida albicans WO-1]
Length = 285
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/240 (53%), Positives = 167/240 (69%), Gaps = 12/240 (5%)
Query: 23 PELSAAPSFSLP---LSTDF------DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADS 73
P+L APS ++P TDF D D K + H GTTTLAF F+ G++VA DS
Sbjct: 34 PQLELAPSIAIPPISQPTDFLRAHTDDSVNPDCKIKIAH--GTTTLAFRFQGGIIVAVDS 91
Query: 74 RASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTG 133
RA+ G +I+SQ+V K+I INP++LGTMAGGAADCQFW LG +CRLHEL K RISV
Sbjct: 92 RATAGNWIASQTVNKVIRINPFLLGTMAGGAADCQFWETWLGTQCRLHELREKERISVAA 151
Query: 134 ASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYG 192
ASK+L+N++Y Y+GMGLS+GTM+ G + GP +YYVDS+G RLKG F VGSG +AYG
Sbjct: 152 ASKILSNLVYQYKGMGLSMGTMVCGHTAKEGPTIYYVDSDGTRLKGDVFCVGSGQTFAYG 211
Query: 193 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
VLDS YK+D+S+E+A L +R+I AT RDA SGG ++Y+V GW +VG+L +
Sbjct: 212 VLDSEYKWDLSVEDALYLGKRSILAATHRDAYSGGSVNLYHVTEQGWTYHGNFNVGDLFW 271
>gi|221055227|ref|XP_002258752.1| 20S proteasome beta subunit [Plasmodium knowlesi strain H]
gi|193808822|emb|CAQ39524.1| 20S proteasome beta subunit, putative [Plasmodium knowlesi strain
H]
Length = 270
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 173/247 (70%), Gaps = 7/247 (2%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
DEL + AP +P + D K+ K H KGTTTLAF FK+G++VA DSRASMG
Sbjct: 27 DEL--QFCVAP-VRVPRNFIKDAKTKNNKLFDFH-KGTTTLAFKFKDGIIVAVDSRASMG 82
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
+ISSQ+V+KIIEIN +LGTMAGGAADC +W + LG +++EL N +ISV AS +L
Sbjct: 83 SFISSQNVEKIIEINKNILGTMAGGAADCLYWEKYLGKIIKIYELRNNEKISVRAASTIL 142
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
+NILY Y+G GL G +++G+D TG ++Y+D EG +++G FS GSGS YAY +LDS Y
Sbjct: 143 SNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAY 202
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK-LSGDDVGELHYHYYPV 257
+++S+E+A ELAR AIYHATFRD SGG V+Y+ NG+ K + G+DV +LHYHY
Sbjct: 203 DYNLSLEQAVELARNAIYHATFRDGGSGGKVRVFYIHKNGYDKIIEGEDVYDLHYHY--T 260
Query: 258 TPSTVEQ 264
P+ +Q
Sbjct: 261 NPAQNDQ 267
>gi|315518883|dbj|BAJ51774.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 238
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 6 FAVPVGNEPSSFLRSCDREEGVRIDLDH--GTTTLAFKFRHGVIVAVDSRASAGKYLASN 63
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 64 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 123
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY+ DM++
Sbjct: 124 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTV 183
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 184 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 233
>gi|224473800|gb|ACN49144.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
Length = 275
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSSFLRSCDREEGVRIDLDH--GTTTLAFKFRHGVIVAVDSRASAGKYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY+ DM++
Sbjct: 161 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 270
>gi|219567054|dbj|BAH05045.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 243
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 155/212 (73%), Gaps = 2/212 (0%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S V K+IEINPY+LGTM+G
Sbjct: 29 EEGVRIDLDH--GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPYLLGTMSG 86
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AADCQ+W R L +CRL+ L N RISV ASKLL+N++ YRGMGLS+G+MI GWD+
Sbjct: 87 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKE 146
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++EEA EL R I HAT RD
Sbjct: 147 GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRD 206
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 207 AYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 238
>gi|219567034|dbj|BAH05035.1| proteasome subunit, beta type 8 [Oryzias hubbsi]
Length = 275
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 161/230 (70%), Gaps = 8/230 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSSFLRSCNREEGVRIDLDH--GTTTLAFKFRHGVIVAVDSRASAGKYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL+N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ PGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSMGSMICGWDKEAPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSDLIHRY 270
>gi|351703555|gb|EHB06474.1| Proteasome subunit beta type-8, partial [Heterocephalus glaber]
Length = 227
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 160/212 (75%), Gaps = 2/212 (0%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
+++ + L H GTTTLAF F+ GV+VA DSRA+ G YIS+ + K+IEINPY+LGTM+G
Sbjct: 13 ERNVRIELAH--GTTTLAFKFQHGVIVAVDSRATAGSYISTVGINKVIEINPYLLGTMSG 70
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AADCQ+W R L +CRL+ L N RISV+ ASKLLAN++ YRG+GLS+G+MI GWD+
Sbjct: 71 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLANMVSQYRGLGLSMGSMICGWDKK 130
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GPGLYYV+ EG RL G FS GSG+ YAYGVLDSG++ D+S EEA +L RRA+ +AT RD
Sbjct: 131 GPGLYYVNEEGTRLSGHLFSTGSGNTYAYGVLDSGHRPDLSPEEAYDLGRRAVVYATHRD 190
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+ SGGV ++Y++ +GW K+ DV +L Y Y
Sbjct: 191 SYSGGVVNMYHMKEDGWVKVESTDVSDLLYQY 222
>gi|61357317|gb|AAX41370.1| proteasome subunit beta type 8 [synthetic construct]
Length = 272
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 156/210 (74%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ ++ A GTTTLAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G A
Sbjct: 58 ERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCA 117
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GP
Sbjct: 118 ADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGP 177
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
GLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD+
Sbjct: 178 GLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSY 237
Query: 225 SGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 238 SGGVVNMYHMKEDGWVKVESTDVSDLLHQY 267
>gi|4758970|ref|NP_004150.1| proteasome subunit beta type-8 isoform E1 proprotein [Homo sapiens]
gi|34637|emb|CAA47026.1| LMP7 [Homo sapiens]
gi|36057|emb|CAA44482.1| RING10 [Homo sapiens]
gi|38481|emb|CAA78705.1| proteasome subunit LMP7 [Homo sapiens]
gi|1054746|emb|CAA60786.1| LMP7 [Homo sapiens]
gi|12654559|gb|AAH01114.1| Proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Homo sapiens]
gi|119624049|gb|EAX03644.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7), isoform CRA_a [Homo
sapiens]
gi|228159|prf||1717394A RING10 gene
Length = 272
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 156/210 (74%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ ++ A GTTTLAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G A
Sbjct: 58 ERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCA 117
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GP
Sbjct: 118 ADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGP 177
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
GLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD+
Sbjct: 178 GLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSY 237
Query: 225 SGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 238 SGGVVNMYHMKEDGWVKVESTDVSDLLHQY 267
>gi|367012307|ref|XP_003680654.1| hypothetical protein TDEL_0C05540 [Torulaspora delbrueckii]
gi|359748313|emb|CCE91443.1| hypothetical protein TDEL_0C05540 [Torulaspora delbrueckii]
Length = 287
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/233 (54%), Positives = 166/233 (71%), Gaps = 8/233 (3%)
Query: 28 APSFSLPLSTDFDEF-------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
APS +LP + EF K+ +K A GTTTLAF F+ G++VA DSRA+ G +
Sbjct: 41 APSIALPPISTPQEFLRAHTDDSKNPDCKIKIAHGTTTLAFRFQGGIVVAVDSRATAGSW 100
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
I+SQ+VKK+IEINP++LGTMAGGAADCQ+W LG +CRLHEL K RISV ASK+L+N
Sbjct: 101 IASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGAQCRLHELKEKERISVAAASKILSN 160
Query: 141 ILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLD+ YK
Sbjct: 161 LVYQYKGAGLSMGTMICGYTKKEGPTVYYVDSDGTRLKGDLFCVGSGQTFAYGVLDANYK 220
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+++ +EEA EL +R+I AT RDA SGG ++Y+V +GW D+ EL +
Sbjct: 221 WELGVEEALELGKRSILAATHRDAYSGGSVNLYHVTEDGWVYHGNHDINELFW 273
>gi|148229628|ref|NP_001080028.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
gi|37589390|gb|AAH59335.1| MGC69086 protein [Xenopus laevis]
Length = 271
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/200 (62%), Positives = 150/200 (75%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF FK GV+VA DSRAS G YI+S K+IEINPY+LGTM+G AADCQ W R L
Sbjct: 66 GTTTLAFKFKHGVIVAVDSRASAGSYIASLKANKVIEINPYLLGTMSGSAADCQHWERLL 125
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CRL++L N RISV+ ASKLL N++ YRG GLSVG+MI GWD+ GPGLYYVD G
Sbjct: 126 AKECRLYQLRNNSRISVSSASKLLCNMMLQYRGSGLSVGSMICGWDKKGPGLYYVDDNGT 185
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
RL G FS GSG+ YAYGV+DSGY+FD++ EEA +L RRAI +AT RD SGGV ++Y++
Sbjct: 186 RLCGDIFSTGSGNSYAYGVMDSGYRFDLTPEEAYDLGRRAISYATHRDNYSGGVVNMYHM 245
Query: 235 GPNGWKKLSGDDVGELHYHY 254
+GW K+ DV EL Y Y
Sbjct: 246 KEDGWVKVGEFDVSELLYKY 265
>gi|380814846|gb|AFE79297.1| proteasome subunit beta type-8 isoform E2 proprotein [Macaca
mulatta]
Length = 276
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 163/233 (69%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + + A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGEGNVQIDMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 DTLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYV+ G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVNEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L R+AI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 219 LSPEEAYDLGRKAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>gi|145520279|ref|XP_001445995.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413472|emb|CAK78598.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 157/215 (73%), Gaps = 3/215 (1%)
Query: 41 EFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTM 100
+ ++ + KH GTTTL F+FKEG+++A DSRASMG ++SS+ V+K+IEIN Y+LGTM
Sbjct: 6 QMEEINQIIFKH--GTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIEINEYLLGTM 63
Query: 101 AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
AGGAADCQ+W L CR +EL N ++SV ASK L IL YR GLS+G MIAG D
Sbjct: 64 AGGAADCQYWLAYLANHCRTYELKNGSKLSVAAASKFLQGILIGYRNSGLSMGCMIAGTD 123
Query: 161 ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATF 220
TG LYY+D++G RLKG FSVGSGS YAYGVLD+ Y++D+S+ EA EL RAIYHAT
Sbjct: 124 TTGQHLYYIDNDGMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVELGVRAIYHATH 183
Query: 221 RDAASGGVASVYYVGPNGWKKL-SGDDVGELHYHY 254
RD ASGGV VY++ +GW K+ G DV +LHY +
Sbjct: 184 RDTASGGVVRVYHIHKDGWTKVHDGIDVVDLHYKF 218
>gi|344232781|gb|EGV64654.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 280
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/253 (53%), Positives = 171/253 (67%), Gaps = 11/253 (4%)
Query: 8 LESTSPFFGSGD---ELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
LE + +GSG EL P + + P+ L TD D D K L H GTTTLA
Sbjct: 17 LEEINGTYGSGPATLELAPTMQLPPISQPTAFLRAHTD-DAANPDCKIKLAH--GTTTLA 73
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
F +K G+++A DSRAS G + +SQ+V K+I INP++LGTMAGGAADCQ+W LG +CRL
Sbjct: 74 FRYKGGIVIAVDSRASQGNFTASQTVHKVIRINPFLLGTMAGGAADCQYWETWLGTQCRL 133
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGT 179
HEL K RISV ASKLL N++Y+Y+GMGLS+GTMI G+ + GP L+YVDS+G RLKG
Sbjct: 134 HELREKERISVAAASKLLGNLVYNYKGMGLSMGTMICGYTQKEGPALFYVDSDGTRLKGD 193
Query: 180 RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
F VGSG +AYGVLDS YK+DM EEA L +R+I A RDA SGG ++Y++ NGW
Sbjct: 194 MFCVGSGQTFAYGVLDSEYKWDMPEEEALYLGKRSILAAAHRDAYSGGSVNLYHIDINGW 253
Query: 240 KKLSGDDVGELHY 252
K DVGEL +
Sbjct: 254 KYHGNFDVGELFW 266
>gi|315518885|dbj|BAJ51775.1| proteasome subunit, beta type 8 [Oryzias dancena]
gi|315518889|dbj|BAJ51777.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 238
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 159/228 (69%), Gaps = 1/228 (0%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A P + PLS ++ + GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 7 AVPVGNEPLSF-LRSCNREEGVRIDLDHGTTTLAFKFRHGVIVAVDSRASAGNYLASNDA 65
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL+N++ YR
Sbjct: 66 NKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNMMLGYR 125
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+G+MI GWD+ GPGL+YVD G RL G FS G G+ YAYGV+DSGYK DM++EE
Sbjct: 126 GMGLSMGSMICGWDKEGPGLFYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEE 185
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL R I HAT RDA SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 186 AYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSKLIHRY 233
>gi|393239729|gb|EJD47259.1| 20S proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 309
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 164/230 (71%), Gaps = 3/230 (1%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
PS L L TD D D + + H GTTTLAF F+ G++VA DSRA+ G YI+S +VKK
Sbjct: 51 PSDFLRLHTD-DHADPDCRIKIHH--GTTTLAFRFQGGIIVAVDSRATGGSYIASGTVKK 107
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEIN ++LGTMAG AADCQ+W LG++CRL+EL +RISV ASK L N++ Y+GM
Sbjct: 108 VIEINRFLLGTMAGTAADCQYWETYLGMQCRLYELREGQRISVAAASKYLVNLVRRYKGM 167
Query: 149 GLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAA 208
G+S+GTMI GWD+TGP LYYVDS+G RLKG FSVGSGS +AYG+LD Y++D++ EA
Sbjct: 168 GISMGTMICGWDKTGPALYYVDSDGTRLKGDLFSVGSGSTFAYGILDPEYRWDLTDAEAQ 227
Query: 209 ELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 258
EL RRAIY A RDA SG ++Y V NGW+ + D+ +LHY + T
Sbjct: 228 ELGRRAIYAAGHRDAFSGNSVNLYQVRENGWEFIDNYDISKLHYEGFAST 277
>gi|397474369|ref|XP_003808654.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pan paniscus]
Length = 272
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 156/210 (74%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ ++ A GTTTLAF F+ GV+ A DSRAS G YIS+ + K+IEINPY+LGTM+G A
Sbjct: 58 ERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRMNKVIEINPYLLGTMSGSA 117
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GP
Sbjct: 118 ADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGP 177
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
GLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD+
Sbjct: 178 GLYYVDQHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSY 237
Query: 225 SGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 238 SGGVVNMYHMKEDGWVKVESTDVSDLLHQY 267
>gi|386868059|dbj|BAM15299.1| proteasome subunit beta type 8, partial [Triakis scyllium]
Length = 202
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 117/196 (59%), Positives = 153/196 (78%), Gaps = 2/196 (1%)
Query: 39 FDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLG 98
+ E ++ + L+H GTTTLAF F+ GV+VA DSRAS G Y++S K+IEINPY+LG
Sbjct: 8 YSEGEEGVRINLQH--GTTTLAFKFEHGVIVAVDSRASAGNYLASVDANKVIEINPYLLG 65
Query: 99 TMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAG 158
TM+G AADCQ+W R L +CRL++L NK+RISV+ ASKLL+N++ YRGMGLS+G+MI G
Sbjct: 66 TMSGSAADCQYWERLLAKQCRLYKLRNKQRISVSAASKLLSNMMCEYRGMGLSMGSMICG 125
Query: 159 WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHA 218
WD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGY++D+ +EEA +LARRAIYHA
Sbjct: 126 WDKKGPGLYYVDDNGTRLSGNMFSTGCGNCYAYGVVDSGYRYDLGVEEACDLARRAIYHA 185
Query: 219 TFRDAASGGVASVYYV 234
T RDA +GG ++Y++
Sbjct: 186 THRDAYTGGFVNMYHM 201
>gi|395728687|ref|XP_002809171.2| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pongo abelii]
Length = 272
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 157/210 (74%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ ++ A GTTTLAF F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G A
Sbjct: 58 ERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIEINPYLLGTMSGCA 117
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GP
Sbjct: 118 ADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGP 177
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
GLYYV+ G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD+
Sbjct: 178 GLYYVNEHGTRLSGNMFSTGSGNAYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSY 237
Query: 225 SGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 238 SGGVVNMYHMKEDGWVKVESTDVSDLLHQY 267
>gi|156086830|ref|XP_001610822.1| proteasome epsilon subunit [Babesia bovis T2Bo]
gi|154798075|gb|EDO07254.1| proteasome epsilon subunit , putative [Babesia bovis]
Length = 268
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 169/250 (67%), Gaps = 14/250 (5%)
Query: 9 ESTSPFFGSGDELCP--ELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEG 66
ES + +G +L P +++ S S D F+K GTTTL F+F +G
Sbjct: 18 ESATDLLKNGFQLYPLEKINYIKSMSKASGQDIFNFKK----------GTTTLGFVFNKG 67
Query: 67 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 126
V++A DSRASMG I++Q++ K+IEIN Y+LGTMAGGAADC +W R++ CRLHEL N+
Sbjct: 68 VILAVDSRASMGSIIATQNISKVIEINSYLLGTMAGGAADCTYWERHVAKLCRLHELRNQ 127
Query: 127 RRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGS 185
RI+V AS++LANI + +RG GLS GTMIAGWD+ GP L+YV +G R+ G FSVGS
Sbjct: 128 ERITVAHASQILANIFFYFRGYGLSAGTMIAGWDKNKGPELFYVSDKGERVSGKLFSVGS 187
Query: 186 GSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSG- 244
GS +AYGV+D Y+ DM+++EA EL +RAIY A RDA SGG ++Y+V NGW K+
Sbjct: 188 GSLFAYGVIDQHYRSDMTLDEAVELGKRAIYQAAHRDAYSGGYVNLYHVHENGWTKIVDY 247
Query: 245 DDVGELHYHY 254
D+ ELHY Y
Sbjct: 248 QDINELHYSY 257
>gi|145484105|ref|XP_001428075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395158|emb|CAK60677.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 153/207 (73%), Gaps = 3/207 (1%)
Query: 49 TLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 108
KH GTTTL F+FKEG+++A DSRASMG ++SS+ V+K+IEIN Y+LGTMAGGAADCQ
Sbjct: 53 NFKH--GTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIEINEYLLGTMAGGAADCQ 110
Query: 109 FWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYY 168
+W L CR +EL N ++SV ASK L IL YR GLS+G MIAG D TG LYY
Sbjct: 111 YWLAYLANHCRTYELKNGSKLSVAAASKFLQGILIGYRNSGLSMGCMIAGTDTTGQHLYY 170
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
+D++G RLKG FSVGSGS YAYGVLD+ Y++D+S+ EA EL RAIYHAT RD ASGGV
Sbjct: 171 IDNDGMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVELGIRAIYHATHRDTASGGV 230
Query: 229 ASVYYVGPNGWKKL-SGDDVGELHYHY 254
VY++ +GW K+ G DV +LHY +
Sbjct: 231 VRVYHIHKDGWTKVHDGIDVVDLHYQF 257
>gi|6249512|emb|CAB60065.1| lmp7 [Mus musculus]
Length = 275
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/232 (54%), Positives = 161/232 (69%), Gaps = 7/232 (3%)
Query: 29 PSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P +LP F ++ ++ A GTTTLAF F+ GV+VA DSRA+ G YIS
Sbjct: 40 PELALPRGMQPTAFLRSFGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYIS 99
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
S + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++
Sbjct: 100 SLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMM 159
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D+
Sbjct: 160 LQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDL 219
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
S EEA +L RRAI +AT RD SGGV + Y++ +GW K+ DV +L Y Y
Sbjct: 220 SPEEAYDLGRRAIAYATHRDNYSGGVVN-YHMKEDGWVKVESSDVSDLLYKY 270
>gi|241951736|ref|XP_002418590.1| macropain subunit, putative; multicatalytic endopeptidase complex
subunit, putative; proteasome component, putative;
proteinase ysce subunit, putative [Candida dubliniensis
CD36]
gi|223641929|emb|CAX43893.1| macropain subunit, putative [Candida dubliniensis CD36]
Length = 285
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/240 (53%), Positives = 167/240 (69%), Gaps = 12/240 (5%)
Query: 23 PELSAAPSFSLP---LSTDF------DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADS 73
P+L +PS ++P TDF D D K + H GTTTLAF F+ G++VA DS
Sbjct: 34 PQLELSPSIAIPPISQPTDFLRAHTDDSVNPDCKIKIAH--GTTTLAFRFQGGIIVAVDS 91
Query: 74 RASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTG 133
RA+ G +I+SQ+V K+I INP++LGTMAGGAADCQ+W LG +CRLHEL K RISV
Sbjct: 92 RATAGNWIASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAA 151
Query: 134 ASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYG 192
ASK+L+N++Y Y+GMGLS+GTMI G + GP +YYVDS+G RLKG F VGSG +AYG
Sbjct: 152 ASKILSNLVYQYKGMGLSMGTMICGHTAKEGPTIYYVDSDGTRLKGDVFCVGSGQTFAYG 211
Query: 193 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
VLDS YK+D+S+E+A L +R+I AT RDA SGG ++Y+V GW +VG+L +
Sbjct: 212 VLDSEYKWDLSVEDALYLGKRSILAATHRDAYSGGSVNLYHVTEQGWTYHGNFNVGDLFW 271
>gi|448118643|ref|XP_004203552.1| Piso0_001164 [Millerozyma farinosa CBS 7064]
gi|448121061|ref|XP_004204135.1| Piso0_001164 [Millerozyma farinosa CBS 7064]
gi|359384420|emb|CCE79124.1| Piso0_001164 [Millerozyma farinosa CBS 7064]
gi|359385003|emb|CCE78538.1| Piso0_001164 [Millerozyma farinosa CBS 7064]
Length = 285
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 167/235 (71%), Gaps = 8/235 (3%)
Query: 26 SAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
S APS S+P + F + + +K A GTTTLAF F+ G++VA DSRA+ G
Sbjct: 34 SLAPSISVPPISQPTAFLRAHTDDNTNPDCKIKIAHGTTTLAFRFQGGIVVAVDSRATAG 93
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
+++SQ+V K+I INP++LGTMAGGAADCQ+W LG +CRLHEL K RISV ASK+L
Sbjct: 94 NWVASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELRQKERISVAAASKIL 153
Query: 139 ANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSG 197
AN++Y Y+GMGLS+GTM+ G+ + GP LYYVDS+G R+KG FSVGSG +AYGVLDS
Sbjct: 154 ANLVYQYKGMGLSMGTMVCGYTKKEGPALYYVDSDGTRIKGDIFSVGSGQTFAYGVLDSE 213
Query: 198 YKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
YK+D+++EEA L +R+I AT RDA SGG ++Y+V NGW +VG++ +
Sbjct: 214 YKWDLTVEEALYLGKRSILAATHRDAFSGGSINLYHVTENGWIYHGNHNVGDIFW 268
>gi|255725326|ref|XP_002547592.1| proteasome component PRE2 precursor [Candida tropicalis MYA-3404]
gi|240135483|gb|EER35037.1| proteasome component PRE2 precursor [Candida tropicalis MYA-3404]
Length = 284
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/249 (52%), Positives = 171/249 (68%), Gaps = 8/249 (3%)
Query: 9 ESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKAT----LKHAKGTTTLAFIFK 64
ES +P S EL P + A P S P T+F D A +K A GTTTLAF F+
Sbjct: 25 ESRTPTSASQLELAPSI-AVPPISQP--TEFLRAHTDDSANPDCKIKIAHGTTTLAFRFQ 81
Query: 65 EGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELA 124
G++VA DSRA+ G +I+SQ+V K+I INP++LGTMAGGAADCQ+W LG +CRLHEL
Sbjct: 82 GGIIVAVDSRATAGNWIASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELR 141
Query: 125 NKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSV 183
K RISV ASK+L+N++Y Y+GMGLS+GTM+ G + GP +YYVDS+G RLKG F V
Sbjct: 142 EKERISVAAASKILSNLVYQYKGMGLSMGTMVCGHTAKEGPTIYYVDSDGTRLKGDVFCV 201
Query: 184 GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLS 243
GSG +AYGVLD+ YK+D+++EEA L +R+I AT RDA SGG ++Y+V GW
Sbjct: 202 GSGQTFAYGVLDTEYKWDLTVEEALYLGKRSILAATHRDAYSGGSINLYHVTEQGWTYHG 261
Query: 244 GDDVGELHY 252
+VG+L +
Sbjct: 262 NYNVGDLFW 270
>gi|378792425|pdb|3UNF|K Chain K, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792439|pdb|3UNF|Y Chain Y, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792453|pdb|3UNH|K Chain K, Mouse 20s Immunoproteasome
gi|378792467|pdb|3UNH|Y Chain Y, Mouse 20s Immunoproteasome
Length = 204
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 151/199 (75%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTTLAF F+ GV+VA DSRA+ G YISS + K+IEINPY+LGTM+G AADCQ+W R L
Sbjct: 1 TTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLA 60
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
+CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G R
Sbjct: 61 KECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTR 120
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
L G FS GSG+ YAYGV+DSGY+ D+S EEA +L RRAI +AT RD SGGV ++Y++
Sbjct: 121 LSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMK 180
Query: 236 PNGWKKLSGDDVGELHYHY 254
+GW K+ DV +L Y Y
Sbjct: 181 EDGWVKVESSDVSDLLYKY 199
>gi|172260|gb|AAA34906.1| proteosome-related protein [Saccharomyces cerevisiae]
Length = 288
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 167/238 (70%), Gaps = 8/238 (3%)
Query: 20 ELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
L P L+ A+P L TD D D K + H GTTTLAF F+ G++VA DSRA
Sbjct: 39 RLAPSLTVPPIASPQQFLRAHTD-DSRNPDCKIKIAH--GTTTLAFRFQGGIIVAVDSRA 95
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV AS
Sbjct: 96 TAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAAS 155
Query: 136 KLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 156 KILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVL 215
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+S+E+A L +R+I A RDA SGG ++Y+V +GW DVGEL +
Sbjct: 216 DSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFW 273
>gi|147899854|ref|NP_001084323.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Xenopus laevis]
gi|971307|dbj|BAA07945.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
gi|38014491|gb|AAH60388.1| PSMB8 protein [Xenopus laevis]
Length = 271
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/254 (51%), Positives = 167/254 (65%), Gaps = 5/254 (1%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLA 60
M L + T PF EL P+ L +E D K H GTTTLA
Sbjct: 17 MPLYGGTISPTIPFRVCNTELAVPPGYQPAKFL---QHLEEGVDDVKIEPWH--GTTTLA 71
Query: 61 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 120
F F+ GV+VA DSRAS G YIS+ K+IEINPY+LGTM+G AADCQ+W R L +CRL
Sbjct: 72 FKFQHGVIVAVDSRASAGSYISTIKFNKVIEINPYLLGTMSGSAADCQYWERLLAKECRL 131
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR 180
++L N RISV+ ASKL+ N++ YRG GLSVG+MI GWD+ GPGLYYVD G RL G
Sbjct: 132 YQLRNNSRISVSAASKLMCNMMLQYRGTGLSVGSMICGWDKKGPGLYYVDDNGTRLCGDI 191
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
FS GSG+ YAYGV+DSGY+FD++ EEA +L RRAI +AT RDA SGG ++Y++ +GW
Sbjct: 192 FSTGSGNSYAYGVMDSGYRFDLTPEEAYDLGRRAISYATHRDAYSGGCVNLYHMKEDGWV 251
Query: 241 KLSGDDVGELHYHY 254
K+ DV +L + +
Sbjct: 252 KIGQFDVSDLLHKF 265
>gi|158518464|ref|NP_001103512.1| proteasome beta 8 subunit [Xenopus (Silurana) tropicalis]
gi|157423123|gb|AAI53714.1| psmb8 protein [Xenopus (Silurana) tropicalis]
Length = 271
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/232 (54%), Positives = 161/232 (69%), Gaps = 3/232 (1%)
Query: 24 ELSAAPSFS-LPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
EL+ P + +E D K H GTTTLAF F+ GV+VA DSRAS G YIS
Sbjct: 36 ELAVPPGYQPAKFLEHLEEGVDDVKIEPWH--GTTTLAFKFQHGVIVAVDSRASAGSYIS 93
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV+ ASKL+ N++
Sbjct: 94 NVKFNKVIEINPYLLGTMSGSAADCQYWERVLAKECRLYQLRNNSRISVSAASKLMCNMM 153
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG GLSVG+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY++D+
Sbjct: 154 LQYRGTGLSVGSMICGWDKKGPGLYYVDDNGTRLCGDIFSTGSGNSYAYGVMDSGYRYDL 213
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+ EEA +L RRAI +AT RDA SGG ++Y++ +GW K+ DV +L + Y
Sbjct: 214 TPEEAYDLGRRAISYATHRDAYSGGFVNLYHMKEDGWVKIGQFDVNDLLHKY 265
>gi|124802189|ref|XP_001347396.1| 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
gi|23494975|gb|AAN35309.1|AE014830_53 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
Length = 271
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/249 (50%), Positives = 171/249 (68%), Gaps = 9/249 (3%)
Query: 18 GDELCPELSAAPSFSLPLSTDFDEF-QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRAS 76
DEL E AP + + +F ++ Q K KGTTTLAF FK+G++VA DSRAS
Sbjct: 27 NDEL--EFCVAP---VNVPRNFIKYAQTQNKKLFDFHKGTTTLAFKFKDGIIVAVDSRAS 81
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
MG +ISSQ+V+KIIEIN +LGTMAGGAADC +W + LG +++EL N +ISV AS
Sbjct: 82 MGSFISSQNVEKIIEINKNILGTMAGGAADCLYWEKYLGKIIKIYELRNNEKISVRAAST 141
Query: 137 LLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDS 196
+L+NILY Y+G GL G +++G+D TG ++YVD G +++G FS GSGS YAY +LDS
Sbjct: 142 ILSNILYQYKGYGLCCGIILSGYDHTGFNMFYVDDSGKKVEGNLFSCGSGSTYAYSILDS 201
Query: 197 GYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK-LSGDDVGELHYHYY 255
Y +++++++A ELAR AIYHATFRD SGG V+++ NG+ K + G+DV +LHYHY
Sbjct: 202 AYDYNLNLDQAVELARNAIYHATFRDGGSGGKVRVFHIHKNGYDKIIEGEDVFDLHYHY- 260
Query: 256 PVTPSTVEQ 264
P +Q
Sbjct: 261 -TNPEQKDQ 268
>gi|323302586|gb|EGA56393.1| Pre2p [Saccharomyces cerevisiae FostersB]
Length = 287
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 167/238 (70%), Gaps = 8/238 (3%)
Query: 20 ELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
L P L+ A+P L TD D D K + H GTTTLAF F+ G++VA DSRA
Sbjct: 39 RLAPSLTVPPIASPQQFLRAHTD-DSRNPDXKIKIAH--GTTTLAFRFQGGIIVAVDSRA 95
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV AS
Sbjct: 96 TAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAAS 155
Query: 136 KLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 156 KILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVL 215
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+S+E+A L +R+I A RDA SGG ++Y+V +GW DVGEL +
Sbjct: 216 DSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFW 273
>gi|19114737|ref|NP_593825.1| 20S proteasome component beta 5 [Schizosaccharomyces pombe 972h-]
gi|3123252|sp|P30655.3|PSB5_SCHPO RecName: Full=Probable proteasome subunit beta type-5; AltName:
Full=Macropain subunit pts1; AltName:
Full=Multicatalytic endopeptidase complex subunit pts1;
AltName: Full=Proteasome component pts1; Flags:
Precursor
gi|4490651|emb|CAB11483.1| 20S proteasome component beta 5 [Schizosaccharomyces pombe]
Length = 272
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/227 (56%), Positives = 164/227 (72%), Gaps = 1/227 (0%)
Query: 24 ELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
++ P SL L DE K+ +K GTTTLAF ++ G++V DSRAS G I+S
Sbjct: 31 DVVPVPQSSLYLRNLTDE-TKNKHCLIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIAS 89
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
Q+VKK+IEINPY+LGT+AGGAADCQFW LG++CRLH+L NK ISV+ ASK+L+NI Y
Sbjct: 90 QTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSAASKILSNITY 149
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
SY+G GLS+GTM+AG + G LYY+DS+G RLKG FSVGSGS +AYGVLDSGY++D+S
Sbjct: 150 SYKGYGLSMGTMLAGTGKGGTALYYIDSDGTRLKGDLFSVGSGSTFAYGVLDSGYRWDLS 209
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 250
+EA LA+R+I AT RDA SGG ++Y++ NGW DV L
Sbjct: 210 KQEALYLAQRSIVAATHRDAYSGGSVNLYHIDENGWVFHGNFDVDSL 256
>gi|66356810|ref|XP_625583.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46226580|gb|EAK87568.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 290
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/202 (60%), Positives = 152/202 (75%), Gaps = 1/202 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
+GTTTL FI++ GV++A DSRAS G YI+SQ VKKII+IN ++LGTMAGGAADC +W R
Sbjct: 78 RGTTTLGFIYQGGVILAVDSRASQGSYIASQEVKKIIQINDFLLGTMAGGAADCSYWERV 137
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L CRL+EL N RISV GASK++ NI + YR LS G MIAG+D+ GP LYYVD+EG
Sbjct: 138 LSKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFDKDGPHLYYVDNEG 197
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+K +FSVGSGS YAYGVLDSGY++D++ EEA +L +RAI AT RD SGG+ VY
Sbjct: 198 SRVKDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRDGGSGGLVRVYQ 257
Query: 234 VGPNG-WKKLSGDDVGELHYHY 254
+ NG K + G+DV ELHY Y
Sbjct: 258 INKNGVIKHVPGEDVSELHYAY 279
>gi|378733450|gb|EHY59909.1| proteasome component PRE2 [Exophiala dermatitidis NIH/UT8656]
Length = 283
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 165/229 (72%), Gaps = 8/229 (3%)
Query: 20 ELCPELS---AAPSFSLP---LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADS 73
E P LS A P + P L D++ + +K A GTTTLAF FK G++VA DS
Sbjct: 28 ETVPPLSLKFALPPVAQPSSFLRAATDDY-SNPNCPIKIAHGTTTLAFRFKGGIIVATDS 86
Query: 74 RASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTG 133
RA+ G +I+SQ+VKK+IEINP +LGTMAGGAADCQ+W LGI+CRLHEL +KRRISV
Sbjct: 87 RATAGNWIASQTVKKVIEINPMLLGTMAGGAADCQYWLAYLGIQCRLHELRHKRRISVAA 146
Query: 134 ASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYG 192
ASK+LAN++YSY+GMGLS+GTMI G + GP LYY+DS+G RL G F VGSG +AYG
Sbjct: 147 ASKILANLVYSYKGMGLSMGTMITGVTPQEGPALYYIDSDGTRLSGNLFCVGSGQTFAYG 206
Query: 193 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
VLD+ YK+D+ +EA EL RR+I AT RDA SGG ++Y+V +GW K
Sbjct: 207 VLDALYKYDLEDDEALELGRRSILAATHRDAYSGGYINLYHVKEDGWVK 255
>gi|149245104|ref|XP_001527086.1| proteasome component PRE2 precursor [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449480|gb|EDK43736.1| proteasome component PRE2 precursor [Lodderomyces elongisporus NRRL
YB-4239]
Length = 282
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 167/237 (70%), Gaps = 8/237 (3%)
Query: 24 ELSAAPSFSLP---LSTDFDEFQKDTKAT----LKHAKGTTTLAFIFKEGVMVAADSRAS 76
+L+ AP+ ++P TDF D + +K A GTTTLAF F+ G++VA DSRA+
Sbjct: 32 QLNLAPTIAVPPISQPTDFLRAHTDDASNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRAT 91
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
G +I+SQ+V K+I INP +LGTMAGGAADCQ+W LG +CRLHEL K RISV ASK
Sbjct: 92 AGNWIASQTVNKVIRINPMLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAASK 151
Query: 137 LLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD 195
+L+N++YSY+GMGLS+GTMI G + GP +YYVDS+G RLKG F VGSG +AYGVLD
Sbjct: 152 ILSNLVYSYKGMGLSMGTMICGHTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVLD 211
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
S YK+D+++EEA L +R+I AT RDA SGG ++Y+V GW +VGEL +
Sbjct: 212 SQYKWDLTVEEALYLGKRSILAATHRDAYSGGSINLYHVNEEGWTYHGNFNVGELFW 268
>gi|311697305|gb|ADQ00176.1| 20S proteasome beta subunit E type beta 5 [Chlamydomonas sp. ICE-L]
Length = 170
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/157 (74%), Positives = 134/157 (85%)
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
MAGGAADCQFW RNLG +CRL+EL N +RI+V ASKLLAN ++SYRGMGLS+GTM+AG+
Sbjct: 1 MAGGAADCQFWQRNLGKQCRLYELNNGKRITVCAASKLLANTMFSYRGMGLSMGTMVAGF 60
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D TGPGLYYVDS+G R KG RFSVGSGS YAYG+LDSGYK+DM ++EA EL RRAIYHAT
Sbjct: 61 DATGPGLYYVDSDGQRTKGQRFSVGSGSLYAYGILDSGYKWDMPVDEAIELGRRAIYHAT 120
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYP 256
FRD ASGG SVY+V +GWKK+ GDDV ELHY YYP
Sbjct: 121 FRDCASGGTVSVYHVTKDGWKKVHGDDVSELHYKYYP 157
>gi|207340308|gb|EDZ68701.1| YPR103Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 287
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 165/233 (70%), Gaps = 8/233 (3%)
Query: 28 APSFSLPLSTDFDEF-------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
APS ++P +F ++ +K A GTTTLAF F+ G++VA DSRA+ G +
Sbjct: 41 APSLTVPPIASPQQFLRSHTDDSRNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRATAGNW 100
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV ASK+L+N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 141 ILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLDS YK
Sbjct: 161 LVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYK 220
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+D+S+E+A L +R+I A RDA SGG ++Y+V +GW DVGEL +
Sbjct: 221 WDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFW 273
>gi|6325360|ref|NP_015428.1| proteasome core particle subunit beta 5 [Saccharomyces cerevisiae
S288c]
gi|730375|sp|P30656.3|PSB5_YEAST RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain subunit PRE2; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE2;
AltName: Full=Proteasome component PRE2; AltName:
Full=Proteinase YSCE subunit PRE2; Flags: Precursor
gi|323462946|pdb|3NZJ|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462960|pdb|3NZJ|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462974|pdb|3NZW|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462988|pdb|3NZW|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463002|pdb|3NZX|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463016|pdb|3NZX|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|4221|emb|CAA48628.1| proteasome Pre2 subunit [Saccharomyces cerevisiae]
gi|914974|gb|AAB68073.1| Pre2p: Proteasome subunit [Saccharomyces cerevisiae]
gi|1041975|gb|AAB34630.1| Doa3, PRG1, PRE2=beta-type proteasome subunit LMP7 homolog/Hs-X
homolog [Saccharomyces cerevisiae, Peptide, 287 aa]
gi|151942879|gb|EDN61225.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|190408030|gb|EDV11295.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|256269062|gb|EEU04399.1| Pre2p [Saccharomyces cerevisiae JAY291]
gi|285815625|tpg|DAA11517.1| TPA: proteasome core particle subunit beta 5 [Saccharomyces
cerevisiae S288c]
gi|323331341|gb|EGA72759.1| Pre2p [Saccharomyces cerevisiae AWRI796]
gi|323335173|gb|EGA76463.1| Pre2p [Saccharomyces cerevisiae Vin13]
gi|323350231|gb|EGA84378.1| Pre2p [Saccharomyces cerevisiae VL3]
gi|349581905|dbj|GAA27062.1| K7_Pre2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296106|gb|EIW07209.1| Pre2p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|742352|prf||2009376C proteasome:SUBUNIT=Pre2
Length = 287
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 167/238 (70%), Gaps = 8/238 (3%)
Query: 20 ELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
L P L+ A+P L TD D D K + H GTTTLAF F+ G++VA DSRA
Sbjct: 39 RLAPSLTVPPIASPQQFLRAHTD-DSRNPDCKIKIAH--GTTTLAFRFQGGIIVAVDSRA 95
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV AS
Sbjct: 96 TAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAAS 155
Query: 136 KLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 156 KILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVL 215
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+S+E+A L +R+I A RDA SGG ++Y+V +GW DVGEL +
Sbjct: 216 DSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFW 273
>gi|971309|dbj|BAA07954.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
Length = 271
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/200 (61%), Positives = 149/200 (74%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF FK GV+VA DSRAS G YI+S K+IEINPY+LGTM+G AADCQ W R L
Sbjct: 66 GTTTLAFKFKHGVIVAVDSRASAGSYIASLKANKVIEINPYLLGTMSGSAADCQHWERLL 125
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CRL++L N RISV+ ASKLL N++ YRG GLSVG+MI GWD+ GPGLYYVD G
Sbjct: 126 AKECRLYQLRNNSRISVSSASKLLCNMMLQYRGSGLSVGSMICGWDKKGPGLYYVDDNGT 185
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
RL G FS GSG+ YAYGV+DSGY+FD++ EEA +L R AI +AT RD SGGV ++Y++
Sbjct: 186 RLCGDIFSTGSGNSYAYGVMDSGYRFDLTPEEAYDLGRHAISYATHRDNYSGGVVNMYHM 245
Query: 235 GPNGWKKLSGDDVGELHYHY 254
+GW K+ DV EL Y Y
Sbjct: 246 KEDGWVKVGEFDVSELLYKY 265
>gi|259150253|emb|CAY87056.1| Pre2p [Saccharomyces cerevisiae EC1118]
gi|365762571|gb|EHN04105.1| Pre2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 287
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 167/238 (70%), Gaps = 8/238 (3%)
Query: 20 ELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
L P L+ A+P L TD D D K + H GTTTLAF F+ G++VA DSRA
Sbjct: 39 RLAPSLTVPPIASPQQFLRAHTD-DSRNPDCKIKIAH--GTTTLAFRFQGGIIVAVDSRA 95
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV AS
Sbjct: 96 TAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAAS 155
Query: 136 KLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 156 KILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVL 215
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+S+E+A L +R+I A RDA SGG ++Y+V +GW DVGEL +
Sbjct: 216 DSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFW 273
>gi|406607444|emb|CCH41235.1| Proteasome subunit beta type-5 [Wickerhamomyces ciferrii]
Length = 285
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 166/237 (70%), Gaps = 8/237 (3%)
Query: 24 ELSAAPSFSLP---LSTDF----DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRAS 76
L APS S+P TDF + K+ +K A GTTTLAF FK G++VA DSRA+
Sbjct: 35 NLPLAPSLSMPPISQPTDFLRAHTDDSKNPDCKIKIAHGTTTLAFRFKGGIVVAVDSRAT 94
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
G +I+SQ+VKK+IEINP++LGTMAGGAADCQ+W LG +CRLHEL K RISV ASK
Sbjct: 95 AGNWIASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKSRISVAAASK 154
Query: 137 LLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD 195
+L+N++Y Y+GMGLS+GTM+ G+ + GP +YYVDS+G RLKG F VGSG +AYGVLD
Sbjct: 155 ILSNLVYQYKGMGLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDVFCVGSGQTFAYGVLD 214
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
S K+D+++EEA L +R+I A RDA SGG ++Y++ +GW DVG Y
Sbjct: 215 SNLKWDLTVEEALYLGKRSILAAAHRDAYSGGSINLYHITEDGWVFHGNHDVGPTFY 271
>gi|320581894|gb|EFW96113.1| Beta 5 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 284
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 163/235 (69%), Gaps = 8/235 (3%)
Query: 26 SAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
S APS S+P + F + + +K A GTTTLAF F+ G++VA DSRA+ G
Sbjct: 36 SLAPSISVPPISQPTAFLRAHTDHDSNPDCKIKMAHGTTTLAFRFQGGIIVAVDSRATAG 95
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
+I+SQ+VKK+IEINP +LGTMAG A DCQ+W LG +CRLHEL NK RISV ASK+L
Sbjct: 96 NWIASQTVKKVIEINPMLLGTMAGTACDCQYWETWLGTQCRLHELRNKERISVCAASKIL 155
Query: 139 ANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSG 197
N++YSY+GMGL +GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLD+
Sbjct: 156 CNLVYSYKGMGLGMGTMICGYTPKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVLDTN 215
Query: 198 YKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
YK+D+S+E+A L +RAI A RDA SGG ++Y+V NGW DVG L +
Sbjct: 216 YKWDLSVEDALYLGKRAILAAAHRDAYSGGSINLYHVTENGWVFHGNHDVGPLFW 270
>gi|156849167|ref|XP_001647464.1| hypothetical protein Kpol_1018p144 [Vanderwaltozyma polyspora DSM
70294]
gi|156118150|gb|EDO19606.1| hypothetical protein Kpol_1018p144 [Vanderwaltozyma polyspora DSM
70294]
Length = 288
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/257 (50%), Positives = 175/257 (68%), Gaps = 13/257 (5%)
Query: 4 DTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEF-------QKDTKATLKHAKGT 56
DT LE+ F SG++ L AP S+P +F ++ ++K A GT
Sbjct: 22 DTDNLEND---FISGNDNFSLL--APKISMPPINSPQQFLRAHTDDSRNPDCSIKIAHGT 76
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTLAF F+ G++VA DSRA+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG
Sbjct: 77 TTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGS 136
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGR 175
+CRLHEL K RISV ASK+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G R
Sbjct: 137 QCRLHELKEKSRISVAAASKILSNLVYQYKGAGLSMGTMICGYTKKEGPTIYYVDSDGTR 196
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
LKG F VGSG +AYGVLDS YK+D++++EA L +R+I A RDA SGG ++Y+V
Sbjct: 197 LKGDLFCVGSGQTFAYGVLDSNYKWDLTVDEALYLGKRSILAAAHRDAYSGGSINLYHVT 256
Query: 236 PNGWKKLSGDDVGELHY 252
NGW DVG + +
Sbjct: 257 ENGWVYHGNHDVGAVFW 273
>gi|323346321|gb|EGA80611.1| Pre2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 287
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 166/238 (69%), Gaps = 8/238 (3%)
Query: 20 ELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
L P L+ A+P L TD D D K + H GTTTLAF F+ G++VA DSRA
Sbjct: 39 RLAPSLTVPPIASPQQFLRAHTD-DSRNPDCKIKIAH--GTTTLAFRFQGGIIVAVDSRA 95
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV AS
Sbjct: 96 TAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAAS 155
Query: 136 KLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 156 KILXNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVL 215
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+S+E+A L +R+I A RDA SGG ++Y+V +GW DVGEL +
Sbjct: 216 DSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFW 273
>gi|254573994|ref|XP_002494106.1| Beta 5 subunit of the 20S proteasome, responsible for the
chymotryptic activity of the proteasome [Komagataella
pastoris GS115]
gi|238033905|emb|CAY71927.1| Beta 5 subunit of the 20S proteasome, responsible for the
chymotryptic activity of the proteasome [Komagataella
pastoris GS115]
gi|328354075|emb|CCA40472.1| 20S proteasome subunit beta 5 [Komagataella pastoris CBS 7435]
Length = 281
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 168/239 (70%), Gaps = 12/239 (5%)
Query: 9 ESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAF 61
++ + FF SG +L APS ++P + EF + + +K A GTTTLAF
Sbjct: 20 DNDNEFFESG----VDLKMAPSITVPPISQPTEFLRAHTDDASNPDCKIKIAHGTTTLAF 75
Query: 62 IFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLH 121
FKEG++VA DSRA+ G +I+SQ+V K+I INP++LGTMAGGAADCQ+W LG +CRLH
Sbjct: 76 RFKEGIIVAVDSRATAGDWIASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLH 135
Query: 122 ELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTR 180
EL K RISV ASK+L N++Y Y+GMGLS+GTM+ G+ + GP +YYVDS+G RLKG
Sbjct: 136 ELREKERISVAAASKILGNLVYQYKGMGLSMGTMVCGFTKKEGPTIYYVDSDGSRLKGDM 195
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
F VGSG +AYGVLDS YK+D+S+E+A L +R+I A RDA SGG ++Y+V +GW
Sbjct: 196 FCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAQHRDAYSGGSINLYHVTESGW 254
>gi|392588627|gb|EIW77959.1| proteasome component pts1 [Coniophora puteana RWD-64-598 SS2]
Length = 306
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/232 (55%), Positives = 162/232 (69%), Gaps = 8/232 (3%)
Query: 28 APSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
AP+FS+PL D F + D +K A GTTT+AF ++ GV+VAAD+RA+MG Y
Sbjct: 54 APTFSMPLVIDPAAFLRLHTDDHADPSCRIKLAHGTTTIAFKYQGGVIVAADARATMGSY 113
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
I S +VKKIIEINPY+LGTMAGG DC +W LG+ CRLHEL N RISV ASK L+N
Sbjct: 114 IGSGTVKKIIEINPYLLGTMAGGGGDCSYWETYLGMHCRLHELRNHERISVAAASKYLSN 173
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
+LYSY+G GLSV T + + GP +YYVD++G R+KG FSVGSGS +AYGVLD GY+
Sbjct: 174 LLYSYKGTGLSVNTPLI-FASQGPAVYYVDADGTRMKGDLFSVGSGSTFAYGVLDQGYRS 232
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
D+S EA ELARR+I+ A RDA SG +VY+V +GW + D+ ELHY
Sbjct: 233 DLSDAEAYELARRSIHAAGHRDAFSGNQCNVYHVKQDGWTFIGNYDLSELHY 284
>gi|219567038|dbj|BAH05037.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 232
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 154/212 (72%), Gaps = 2/212 (0%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
++ + L H GTTTLAF F+ GV+VA DSRAS G Y+ K+IEINPY+LGTM+G
Sbjct: 18 EEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLDCNDANKVIEINPYLLGTMSG 75
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AADCQ+W R L +CRL++L N RISV ASKLL+N++ Y+GMGLS+G+MI GWD+
Sbjct: 76 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNMMLGYKGMGLSMGSMICGWDKE 135
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GPGL+YVDS G RL G FS G G+ YAYGV+DSGYK DM++EEA EL R I HAT RD
Sbjct: 136 GPGLFYVDSNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRD 195
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A SGG ++Y++ +GW K+ +DV +L + Y
Sbjct: 196 AYSGGSVNMYHMREDGWIKVCKEDVSKLIHRY 227
>gi|195124145|ref|XP_002006554.1| GI21121 [Drosophila mojavensis]
gi|193911622|gb|EDW10489.1| GI21121 [Drosophila mojavensis]
Length = 314
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/243 (51%), Positives = 165/243 (67%), Gaps = 10/243 (4%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
AP F P + + + + K ++ GTTTL F ++ GV++ ADSRA+ G YI SQ++K
Sbjct: 45 APPFENP-AVNLPKILEHCKVRMEFDHGTTTLGFKYQGGVVLCADSRATSGEYIGSQTMK 103
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
KI+E+N YMLGT+AGGAADC +W R L +CRLHEL KRRISV A++++ NI Y+G
Sbjct: 104 KIVELNNYMLGTLAGGAADCVYWDRVLARECRLHELRYKRRISVDAAARMMCNICAEYKG 163
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGL +G ++AG D+ G L YVDSEG R G+ FSVGSGSPYA GVLD+GY++D+S EEA
Sbjct: 164 MGLVMGMILAGCDDEGSKLIYVDSEGMRSHGSVFSVGSGSPYALGVLDTGYRWDLSNEEA 223
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH---------YHYYPVT 258
+LARRAIYHAT +DA SGG+ +Y++ GW+ +S D ELH Y P
Sbjct: 224 YDLARRAIYHATRKDAYSGGIVRLYHITDKGWRNVSNTDCHELHDVFENQPMNYENNPNM 283
Query: 259 PST 261
P T
Sbjct: 284 PCT 286
>gi|401623154|gb|EJS41261.1| pre2p [Saccharomyces arboricola H-6]
Length = 287
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/237 (54%), Positives = 167/237 (70%), Gaps = 8/237 (3%)
Query: 21 LCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRAS 76
L P L+ A+P L TD D D K + H GTTTLAF F+ G++VA DSRA+
Sbjct: 40 LAPTLTVPPIASPQQFLRAHTD-DSRNPDCKIKIAH--GTTTLAFRFQGGIVVAVDSRAT 96
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV ASK
Sbjct: 97 AGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASK 156
Query: 137 LLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD 195
+L+N++Y Y+G GLS+GTM+ G+ + GP +YYVDS+G RLKG F VGSG +AYGVLD
Sbjct: 157 ILSNLVYQYKGAGLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLD 216
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
S YK+D+S+E+A L +R+I A RDA SGG ++Y+V +GW DVGEL +
Sbjct: 217 SNYKWDLSVEDALYLGKRSILAAAHRDAFSGGSVNLYHVTEDGWIYHGNHDVGELFW 273
>gi|255713154|ref|XP_002552859.1| KLTH0D03058p [Lachancea thermotolerans]
gi|238934239|emb|CAR22421.1| KLTH0D03058p [Lachancea thermotolerans CBS 6340]
Length = 287
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/246 (51%), Positives = 170/246 (69%), Gaps = 10/246 (4%)
Query: 2 KLDTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEF-------QKDTKATLKHAK 54
+L+ E S F +G+ + L AP ++P + EF ++ +K A
Sbjct: 17 ELEYDNEEGLSRDFVTGNSMFQRL--APQIAMPPISSPQEFLRAHTDDSQNPDCKIKIAH 74
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK+IEINP++LGT+AGGAADCQFW L
Sbjct: 75 GTTTLAFRFQGGIVVAVDSRATAGSWIASQTVKKVIEINPFLLGTLAGGAADCQFWETWL 134
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEG 173
G +CRLHEL K RISV ASK+L+N++Y Y+G GLS+GTM+ G+ + GP +YYVDS+G
Sbjct: 135 GTQCRLHELKEKERISVAAASKILSNLVYQYKGAGLSMGTMVCGYTKKEGPTIYYVDSDG 194
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
RLKG F VGSG +AYGVLDS YK+D+S+EEA L +R+I AT RDA SGG ++Y+
Sbjct: 195 TRLKGDMFCVGSGQTFAYGVLDSNYKWDLSVEEALYLGKRSILAATHRDAYSGGSVNLYH 254
Query: 234 VGPNGW 239
V GW
Sbjct: 255 VTEQGW 260
>gi|430812678|emb|CCJ29922.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 269
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/234 (54%), Positives = 163/234 (69%), Gaps = 14/234 (5%)
Query: 31 FSLPLSTDFDEFQKDTKAT----LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F PL + ++ K++K T K GTTTLAF F G++VA DSRA+ G +I+SQ+V
Sbjct: 21 FQNPLDSLYNSSFKNSKVTDTISSKITHGTTTLAFCFSGGILVAVDSRATAGSWIASQTV 80
Query: 87 KKIIEINPYMLGTMAGGAADCQ---------FWHRNLGIKCRLHELANKRRISVTGASKL 137
+K+IEIN Y+LGTMAGGAADCQ FW L ++CRL+EL +K RISV ASK+
Sbjct: 81 QKVIEINDYLLGTMAGGAADCQVGLQLSAVEFWETVLRMECRLYELRHKTRISVAAASKI 140
Query: 138 LANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDS 196
LANI+YSY+GMGLS+GTMI GWDE GP L+YVDSEG RLKG F VGSG +AY ++D
Sbjct: 141 LANIVYSYKGMGLSMGTMICGWDERRGPSLFYVDSEGTRLKGNMFCVGSGQTFAYSIVDD 200
Query: 197 GYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 250
Y +DMS+E+A EL +RAI AT RDA SGG ++Y++ GW+ DV +L
Sbjct: 201 KYSWDMSVEDAIELGKRAILAATHRDAFSGGNVNIYHIRSEGWRFCGRFDVAQL 254
>gi|145548529|ref|XP_001459945.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427772|emb|CAK92548.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 153/207 (73%), Gaps = 3/207 (1%)
Query: 49 TLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 108
KH GTTTL F+FKEG+++A DSRASMG ++SS+ V+K+IEIN Y+LGTMAGGAADCQ
Sbjct: 8 NFKH--GTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIEINEYLLGTMAGGAADCQ 65
Query: 109 FWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYY 168
+W L CR +EL N ++SV ASK L IL Y+ GLS+G MIAG D +G LYY
Sbjct: 66 YWLAYLANHCRTYELKNGSKLSVAAASKFLQGILIGYKNSGLSMGCMIAGTDLSGQHLYY 125
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
+D++G RLKG FSVGSGS YAYGVLD+ Y++D+S+ EA EL RAIYHAT RD ASGGV
Sbjct: 126 IDNDGMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVELGVRAIYHATHRDTASGGV 185
Query: 229 ASVYYVGPNGWKKL-SGDDVGELHYHY 254
VY++ NGW K+ G DV +LHY +
Sbjct: 186 VRVYHIHQNGWTKVHDGIDVVDLHYKF 212
>gi|403071958|pdb|4B4T|5 Chain 5, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
Length = 287
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 167/238 (70%), Gaps = 8/238 (3%)
Query: 20 ELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
L P L+ A+P L TD D D K + H GTTTLAF F+ G++VA DSRA
Sbjct: 39 RLAPSLTVPPIASPQQFLRAHTD-DSRNPDCKIKIAH--GTTTLAFRFQGGIIVAVDSRA 95
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+VK++IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV AS
Sbjct: 96 TAGNWVASQTVKRVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAAS 155
Query: 136 KLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 156 KILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVL 215
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+S+E+A L +R+I A RDA SGG ++Y+V +GW DVGEL +
Sbjct: 216 DSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFW 273
>gi|407924605|gb|EKG17638.1| Peptidase T1A proteasome beta-subunit [Macrophomina phaseolina MS6]
Length = 283
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/240 (54%), Positives = 171/240 (71%), Gaps = 8/240 (3%)
Query: 20 ELCPELS---AAPSFSLP---LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADS 73
E+ P LS A P + P L T D++ + +K A GTTTLAF FK G++VA DS
Sbjct: 28 EVTPPLSLKFALPPVAAPASWLRTMTDDY-SNPNCPIKIAHGTTTLAFRFKGGIIVATDS 86
Query: 74 RASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTG 133
RA+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV
Sbjct: 87 RATAGNWIASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAA 146
Query: 134 ASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYG 192
ASK+LAN++YSY+GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYG
Sbjct: 147 ASKILANLVYSYKGMGLSMGTMCAGVTPQEGPALYYIDSDGTRLSGNLFCVGSGQTFAYG 206
Query: 193 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
VLD+ YK+D+S E+A EL RR+I AT RDA SGG ++Y+V +GW + +D + +
Sbjct: 207 VLDAEYKYDLSDEDALELGRRSILAATHRDAFSGGFINLYHVKEDGWVRHGFNDTNPIFW 266
>gi|344302845|gb|EGW33119.1| proteasome component PRE2 precursor [Spathaspora passalidarum NRRL
Y-27907]
Length = 282
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 166/238 (69%), Gaps = 8/238 (3%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQKDTKAT----LKHAKGTTTLAFIFKEGVMVAADSRA 75
EL P +S P S P TDF D + +K A GTTTLAF F+ G++VA DSRA
Sbjct: 34 ELAPSISVPP-ISQP--TDFLRAHTDDASNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRA 90
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +I+SQ+V K+I INP++LGTMAGGAADCQ+W LG +CRLHEL K RISV AS
Sbjct: 91 TAGNWIASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAAS 150
Query: 136 KLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L+N++Y Y+GMGLS+GTM+ G + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 151 KILSNLVYEYKGMGLSMGTMVCGHTKKEGPAIYYVDSDGTRLKGDLFCVGSGQTFAYGVL 210
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+++EEA L +R+I AT RDA SGG ++Y++ GW +VG++ +
Sbjct: 211 DSEYKWDLTVEEALYLGKRSILAATHRDAYSGGSINLYHINEQGWTYHGNHNVGDVFW 268
>gi|50288021|ref|XP_446439.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525747|emb|CAG59366.1| unnamed protein product [Candida glabrata]
Length = 286
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 167/238 (70%), Gaps = 8/238 (3%)
Query: 20 ELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
+L P ++ A+P L TD D D K + H GTTTLAF F+ G++VA DSRA
Sbjct: 38 QLAPAIAMPPIASPQAFLRAHTD-DSKNPDCKIKIAH--GTTTLAFRFQGGIVVAVDSRA 94
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV AS
Sbjct: 95 TAGQWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELKEKERISVAAAS 154
Query: 136 KLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 155 KILGNLVYQYKGAGLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVL 214
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+S+EEA L +R+I A RDA SGG ++Y+V +GW DVG+L +
Sbjct: 215 DSNYKWDLSVEEALYLGKRSILAAAHRDAYSGGSINLYHVTEDGWVYHGNHDVGQLFW 272
>gi|354543681|emb|CCE40402.1| hypothetical protein CPAR2_104380 [Candida parapsilosis]
Length = 282
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 128/239 (53%), Positives = 167/239 (69%), Gaps = 12/239 (5%)
Query: 24 ELSAAPSFSLP---LSTDF------DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
+L+ APS ++P TDF D D K + H GTTTLAF F+ G++VA DSR
Sbjct: 32 QLNLAPSIAVPPISQPTDFLRAHTDDSQNPDCKIKIAH--GTTTLAFRFQGGIIVAVDSR 89
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G +I+SQ+V K+I INP +LGTMAGGAADCQFW LG +CRLHEL K RISV A
Sbjct: 90 ATAGNWIASQTVNKVIRINPQLLGTMAGGAADCQFWETWLGTQCRLHELREKERISVAAA 149
Query: 135 SKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGV 193
SK+L+N++YSY+GMGLS+GTM+ G + GP +YYVDS+G RLKG F VGSG +AYGV
Sbjct: 150 SKILSNLVYSYKGMGLSMGTMVCGHTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGV 209
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
LDS YK+D++++EA L +R+I AT RDA SGG ++Y+V GW +VG+L +
Sbjct: 210 LDSEYKWDLTVDEALYLGKRSILAATHRDAYSGGSINLYHVNEEGWTYHGNYNVGDLFW 268
>gi|322707035|gb|EFY98614.1| proteasome component PRE2 precursor [Metarhizium anisopliae ARSEF
23]
Length = 283
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 132/243 (54%), Positives = 166/243 (68%), Gaps = 11/243 (4%)
Query: 9 ESTSPFFGSGDELCPELS------AAPSFSLP---LSTDFDEFQKDTKATLKHAKGTTTL 59
E PF E+ S A P S P L D+ + + +K A GTTTL
Sbjct: 14 EQNEPFENEAQEMMDATSSLTTKFAMPPISQPSSWLRAATDD-RSNPDCPIKIAHGTTTL 72
Query: 60 AFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR 119
AF F+ G++VA DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CR
Sbjct: 73 AFRFQGGIIVATDSRATAGNWIASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCR 132
Query: 120 LHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKG 178
LHEL +KRRISV ASK+LAN++YSY+GMGLS+GTM AG E GP LYYVDS+G RL G
Sbjct: 133 LHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTKEEGPALYYVDSDGTRLAG 192
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
F VGSG +AYGVLD+ Y +D+S+E+A EL RR+I AT RDA SGG ++Y+V G
Sbjct: 193 NLFCVGSGQTFAYGVLDAEYNYDLSVEDALELGRRSILAATHRDAYSGGFINLYHVKEEG 252
Query: 239 WKK 241
W K
Sbjct: 253 WVK 255
>gi|342890147|gb|EGU89011.1| hypothetical protein FOXB_00423 [Fusarium oxysporum Fo5176]
Length = 1820
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 129/227 (56%), Positives = 164/227 (72%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 1580 AQPSSWLRAATDD---RSNPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 1636
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 1637 KKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYK 1696
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLD+ YK+D+S E
Sbjct: 1697 GMGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYKYDLSDE 1756
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA EL +R+I AT RDA SGG ++Y+V GW K +D + +
Sbjct: 1757 EALELGKRSILAATHRDAYSGGYINLYHVKEEGWVKHGFNDTNPIFW 1803
>gi|448517091|ref|XP_003867707.1| Pre2 proteasome beta-5 subunit [Candida orthopsilosis Co 90-125]
gi|380352046|emb|CCG22270.1| Pre2 proteasome beta-5 subunit [Candida orthopsilosis]
Length = 282
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 167/237 (70%), Gaps = 8/237 (3%)
Query: 24 ELSAAPSFSLP---LSTDF----DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRAS 76
+ + APS ++P TDF + K+ +K A GTTTLAF F+ G++VA DSRA+
Sbjct: 32 QFNLAPSIAVPPISQPTDFLRAHTDDSKNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRAT 91
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
G +I+SQ+V K+I INP +LGTMAGGAADCQFW LG +CRLHEL K RISV ASK
Sbjct: 92 AGNWIASQTVNKVIRINPQLLGTMAGGAADCQFWETWLGTQCRLHELREKERISVAAASK 151
Query: 137 LLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD 195
+L+N++YSY+GMGLS+GTM+ G + GP +YYVDS+G RLKG F VGSG +AYGVLD
Sbjct: 152 ILSNLVYSYKGMGLSMGTMVCGHTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVLD 211
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
S YK+D++++EA L +R+I AT RDA SGG ++Y+V GW +VG+L +
Sbjct: 212 SEYKWDLTVDEALYLGKRSILAATHRDAYSGGSVNLYHVNEEGWTYHGNYNVGDLFW 268
>gi|358377748|gb|EHK15431.1| hypothetical protein TRIVIDRAFT_87262 [Trichoderma virens Gv29-8]
Length = 285
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 159/216 (73%), Gaps = 4/216 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD D D + H GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 45 AQPSAWLRAATD-DRSNPDCPIKIAH--GTTTLAFRFQGGIIVATDSRATAGNWIASQTV 101
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 102 KKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLIYSYK 161
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLDS YK+D++ E
Sbjct: 162 GMGLSMGTMCAGVTKEEGPALYYVDSDGTRLSGNLFCVGSGQTFAYGVLDSEYKYDLTDE 221
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
EA EL +R+I AT RDA SGG ++Y+V GW K
Sbjct: 222 EALELGKRSILAATHRDAYSGGYINLYHVKEQGWVK 257
>gi|67588907|ref|XP_665380.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656042|gb|EAL35150.1| hypothetical protein Chro.50424 [Cryptosporidium hominis]
Length = 290
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/202 (60%), Positives = 152/202 (75%), Gaps = 1/202 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
+GTTTL FI++ GV++A DSRAS G YI+SQ VKKII+IN ++LGTMAGGAADC +W R
Sbjct: 78 RGTTTLGFIYQGGVILAVDSRASQGNYIASQEVKKIIQINDFLLGTMAGGAADCSYWERV 137
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L CRL+EL N RISV GASK++ NI + YR LS G MIAG+D+ GP LYYVD+EG
Sbjct: 138 LSKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFDKDGPHLYYVDNEG 197
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+K +FSVGSGS YAYGVLDSGY++D++ EEA +L +RAI AT RD SGG+ VY
Sbjct: 198 SRVKDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRDGGSGGLVRVYQ 257
Query: 234 VGPNG-WKKLSGDDVGELHYHY 254
+ +G K + G+DV ELHY Y
Sbjct: 258 INKSGVIKHVPGEDVSELHYAY 279
>gi|363749853|ref|XP_003645144.1| hypothetical protein Ecym_2614 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888777|gb|AET38327.1| Hypothetical protein Ecym_2614 [Eremothecium cymbalariae
DBVPG#7215]
Length = 285
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/242 (54%), Positives = 167/242 (69%), Gaps = 8/242 (3%)
Query: 16 GSGDELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAA 71
G +L P LS A+P L TD D D K + H GTTTLAF F+ G++VA
Sbjct: 33 GRFKQLAPSLSMPPVASPQAFLRAHTD-DSKNPDCKIKIAH--GTTTLAFRFQGGIVVAV 89
Query: 72 DSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 131
DSRA+ G +I+SQ+VKK+IEINP++LGTMAGGAADCQ+W LG +CRLHEL K RISV
Sbjct: 90 DSRATAGQWIASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGAQCRLHELKEKERISV 149
Query: 132 TGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYA 190
ASK+L N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +A
Sbjct: 150 AAASKILGNLVYEYKGAGLSMGTMICGYTKKEGPTIYYVDSDGMRLKGDLFCVGSGQTFA 209
Query: 191 YGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 250
YGVLD+ YK+D+++EEA L +R+I A RDA SGG ++Y+V NGW DVG L
Sbjct: 210 YGVLDTNYKWDLTVEEALYLGKRSILAAAHRDAYSGGSVNLYHVTENGWVFHGNYDVGTL 269
Query: 251 HY 252
+
Sbjct: 270 FW 271
>gi|60826857|gb|AAX36774.1| proteasome subunit beta type 8 [synthetic construct]
Length = 273
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 155/210 (73%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ ++ A GTTTLAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G A
Sbjct: 58 ERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCA 117
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GP
Sbjct: 118 ADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGP 177
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
GLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD+
Sbjct: 178 GLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSY 237
Query: 225 SGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGGV ++Y++ +G K+ DV +L + Y
Sbjct: 238 SGGVVNMYHMKEDGLVKVESTDVSDLLHQY 267
>gi|49456283|emb|CAG46462.1| PSMB8 [Homo sapiens]
Length = 272
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 155/210 (73%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ ++ A GTTTLAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G A
Sbjct: 58 ERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCA 117
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
ADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GP
Sbjct: 118 ADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGP 177
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
GLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD+
Sbjct: 178 GLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSY 237
Query: 225 SGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
SGGV ++Y++ +G K+ DV +L + Y
Sbjct: 238 SGGVVNMYHMKEDGLVKVESTDVSDLLHQY 267
>gi|50310861|ref|XP_455453.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644589|emb|CAG98161.1| KLLA0F08228p [Kluyveromyces lactis]
Length = 285
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 169/246 (68%), Gaps = 10/246 (4%)
Query: 15 FGSGDELCPELSAAPSFSLPLSTDFDEF-------QKDTKATLKHAKGTTTLAFIFKEGV 67
F GD +L APS S+P + +F K+ +K A GTTTLAF FK G+
Sbjct: 27 FVLGDSQFKQL--APSLSMPPISTPQQFLRAHTDDSKNPDCKIKIAHGTTTLAFRFKGGI 84
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRA+ G +I+SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K
Sbjct: 85 IVAVDSRATAGQWIASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKE 144
Query: 128 RISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSG 186
RISV ASK+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RL+G F VGSG
Sbjct: 145 RISVAAASKILSNLVYEYKGAGLSMGTMICGYTKKEGPTIYYVDSDGTRLQGDLFCVGSG 204
Query: 187 SPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD 246
+AYGVLD+ Y++D+S+EEA + +R+I A RDA SGG ++Y+V NGW +
Sbjct: 205 QTFAYGVLDANYRWDLSVEEALYIGKRSILAAAHRDAYSGGSINLYHVTENGWVYHGNHN 264
Query: 247 VGELHY 252
V L +
Sbjct: 265 VDTLFW 270
>gi|50423687|ref|XP_460428.1| DEHA2F01496p [Debaryomyces hansenii CBS767]
gi|49656097|emb|CAG88735.1| DEHA2F01496p [Debaryomyces hansenii CBS767]
Length = 282
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 165/237 (69%), Gaps = 8/237 (3%)
Query: 24 ELSAAPSFSLP---LSTDFDEFQKDTKAT----LKHAKGTTTLAFIFKEGVMVAADSRAS 76
+L APS LP TDF D + +K A GTTT+AF F+ G++VA DSRA+
Sbjct: 32 QLDLAPSIQLPPISQPTDFLRAHTDDASNPDCKIKIAHGTTTMAFRFQGGIVVAVDSRAT 91
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
G +I+SQ+V K+I INP +LGTMAGGAADCQ+W LG +CRLHEL K RISV ASK
Sbjct: 92 QGNWIASQTVNKVIRINPDLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAASK 151
Query: 137 LLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD 195
+L+N++Y Y+GMGLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLD
Sbjct: 152 ILSNLVYEYKGMGLSMGTMICGYTKKEGPTIYYVDSDGSRLKGEMFCVGSGQTFAYGVLD 211
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
S Y++D+S+EEA L +R+I AT RDA SGG ++Y+V GW +VG++ +
Sbjct: 212 SEYRWDLSVEEALYLGKRSILAATHRDAYSGGSVNLYHVTEAGWVYHGNHNVGDIFW 268
>gi|365757898|gb|EHM99769.1| Pre2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 287
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 167/238 (70%), Gaps = 8/238 (3%)
Query: 20 ELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
L P L+ A+P L TD D D K + H GTTTLAF F+ G++VA DSRA
Sbjct: 39 HLAPTLTVPPIASPQQFLRAHTD-DSRNPDCKIKIAH--GTTTLAFRFQGGIVVAVDSRA 95
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+VKK+IEINP++LGT+AGGAADCQFW LG +CRLHEL K RISV AS
Sbjct: 96 TAGNWVASQTVKKVIEINPFLLGTLAGGAADCQFWETWLGSQCRLHELREKERISVAAAS 155
Query: 136 KLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L+N++Y Y+G GLS+GTM+ G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 156 KILSNLVYQYKGAGLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVL 215
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+S+E+A L +R+I A RDA SGG ++Y+V +GW D+GEL +
Sbjct: 216 DSNYKWDLSVEDALYLGKRSILAAAHRDAFSGGSVNLYHVTEDGWIYHGNHDIGELFW 273
>gi|410079246|ref|XP_003957204.1| hypothetical protein KAFR_0D04210 [Kazachstania africana CBS 2517]
gi|372463789|emb|CCF58069.1| hypothetical protein KAFR_0D04210 [Kazachstania africana CBS 2517]
Length = 287
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/234 (54%), Positives = 165/234 (70%), Gaps = 8/234 (3%)
Query: 20 ELCPELSAAPSFS----LPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
+L P++S P S L TD D D K + H GTTTLAF F+ G++VA DSRA
Sbjct: 39 QLAPKISVPPISSPQQFLRAHTD-DSRNPDCKIKIAH--GTTTLAFRFQGGIIVAVDSRA 95
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+VKK+IEINP++LGTMAGGAADCQ+W LG +CRLHEL K RISV AS
Sbjct: 96 TAGNWVASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGSQCRLHELKEKDRISVAAAS 155
Query: 136 KLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 156 KILSNLVYQYKGAGLSMGTMICGYTKKEGPTVYYVDSDGTRLKGDLFCVGSGQTFAYGVL 215
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVG 248
DS YK+D+++EEA L +R+I A RDA SGG ++Y+V NGW DVG
Sbjct: 216 DSNYKWDLTVEEALYLGKRSILAAAHRDAYSGGSINLYHVTENGWVYHGNHDVG 269
>gi|335345758|gb|AEH41459.1| proteasome component PRE2 [Endocarpon pusillum]
Length = 283
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/227 (56%), Positives = 162/227 (71%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + +K A GTTTLAF FK G++VA DSRA+ G +I+SQ+V
Sbjct: 43 ARPSAFLRATTDD---HANPNCPIKLAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTV 99
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LGI+CRLHEL +KRRISV ASK+L+N++YSY+
Sbjct: 100 KKVIEINSCLLGTMAGGAADCQYWLAYLGIQCRLHELRHKRRISVAAASKILSNLVYSYK 159
Query: 147 GMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTMI G + GP LYY+DS+G RL G F VGSG +AYGVLD+ YK+D+ E
Sbjct: 160 GMGLSMGTMITGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYKYDLEDE 219
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA EL RR+I AT RDA SGG ++Y+V +GW K D + +
Sbjct: 220 EALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIFW 266
>gi|365982101|ref|XP_003667884.1| hypothetical protein NDAI_0A04860 [Naumovozyma dairenensis CBS 421]
gi|343766650|emb|CCD22641.1| hypothetical protein NDAI_0A04860 [Naumovozyma dairenensis CBS 421]
Length = 287
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/251 (51%), Positives = 171/251 (68%), Gaps = 10/251 (3%)
Query: 2 KLDTSGLESTSPFFGSGDELCPELSAAPSFSLP---LSTDFDEFQKDTKATLKHAKGTTT 58
+L + TS F +L P++S P S P L D+ K+ +K A GTTT
Sbjct: 25 ELQHDFINGTSQF----QQLAPQISIPP-ISTPQQFLRAHTDD-SKNPDCKIKIAHGTTT 78
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAF FK G++VA DSRA+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +C
Sbjct: 79 LAFRFKGGIVVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQC 138
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLK 177
RLHEL K RISV ASK+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RL+
Sbjct: 139 RLHELKEKNRISVAAASKILSNLVYQYKGAGLSMGTMICGYTKKEGPTIYYVDSDGTRLQ 198
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
G F VGSG +AYGVLDS YK+D+++EEA L +R+I A RDA SGG ++Y++
Sbjct: 199 GDLFCVGSGQTFAYGVLDSNYKWDLTVEEALYLGKRSILAAAHRDAYSGGSINLYHITEE 258
Query: 238 GWKKLSGDDVG 248
GW DVG
Sbjct: 259 GWVYHGNHDVG 269
>gi|340520194|gb|EGR50431.1| proteasome catalytic subunit 3 [Trichoderma reesei QM6a]
Length = 285
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 159/216 (73%), Gaps = 4/216 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD D D + H GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 45 AQPSAWLRAATD-DRSNPDCPIKIAH--GTTTLAFRFQGGIIVATDSRATAGNWIASQTV 101
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 102 KKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLIYSYK 161
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLDS YK++MS E
Sbjct: 162 GMGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDSEYKYEMSDE 221
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
EA EL +R+I AT RDA SGG ++Y+V GW K
Sbjct: 222 EALELGKRSILAATHRDAYSGGYINLYHVKEAGWVK 257
>gi|195380597|ref|XP_002049057.1| GJ20967 [Drosophila virilis]
gi|194143854|gb|EDW60250.1| GJ20967 [Drosophila virilis]
Length = 312
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/285 (45%), Positives = 180/285 (63%), Gaps = 29/285 (10%)
Query: 13 PFFGSGDELCPELS------AAPSFSLP---LSTDFDEFQKDTKATLKHAK-------GT 56
PF DEL E A +F+ P ++ F+ ++ L+H K GT
Sbjct: 13 PFMKRFDELQKEWDLHQIQIATSNFTNPYSLMAPPFENPAENLPKILEHCKVRMECDHGT 72
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TTL F ++ G+++ ADSRA+ G YI SQ++KKI+E+N YMLGT+AGGAADC +W R L
Sbjct: 73 TTLGFKYQGGIVLCADSRATSGEYIGSQTMKKIVELNSYMLGTLAGGAADCVYWDRVLAR 132
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+CRLHEL KRRI+V A++++ NI Y+GMGL +G M+AG D+ G L YVDS+G R
Sbjct: 133 ECRLHELRYKRRITVDAAARMMCNISTQYKGMGLVMGMMLAGCDDEGCKLIYVDSDGMRS 192
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
G+ FSVGSGSPYA GVLD+GY++D++ +EA +LARRAIYHAT +DA SGG+ +Y++
Sbjct: 193 HGSVFSVGSGSPYALGVLDTGYRWDLTTDEAFDLARRAIYHATSKDAYSGGIVRLYHIND 252
Query: 237 NGWKKLSGDDVGELHYHY------------YPVTPST-VEQEMAE 268
GWK + D +LH + P T T VEQ++ +
Sbjct: 253 KGWKNICNTDCNDLHDQFCKESMKNGSNSNLPCTSRTWVEQKLQQ 297
>gi|225192958|dbj|BAH29695.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 148/208 (71%), Gaps = 4/208 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTTL+F FK GV+VA DSRAS G YI +
Sbjct: 41 FAIPVGEEPVGFLKSCNTEGGARFELHHGTTTLSFKFKHGVIVAVDSRASTGSYIDTCEY 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 101 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR 160
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSGS YAYGVLDSGYK DM++EE
Sbjct: 161 GMGLSVGSMICGWDKEGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEE 220
Query: 207 AAELARRAIYHATFRDAASGGVASVYYV 234
A EL RR I HAT RD+ SGGV +VY++
Sbjct: 221 AYELGRRGIVHATHRDSYSGGVVNVYHI 248
>gi|449300001|gb|EMC96014.1| hypothetical protein BAUCODRAFT_70978 [Baudoinia compniacensis UAMH
10762]
Length = 285
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/242 (53%), Positives = 166/242 (68%), Gaps = 12/242 (4%)
Query: 25 LSAAPSFSL-----PLSTD------FDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADS 73
L APS SL P+++ + + +K A GTTTLAF FK G++VA DS
Sbjct: 29 LDVAPSLSLNFALPPIASTASWLRAMTDDHANPNVPIKLAHGTTTLAFRFKGGIIVATDS 88
Query: 74 RASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTG 133
RA+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV
Sbjct: 89 RATAGNWIASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAA 148
Query: 134 ASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYG 192
ASK+LAN++YSY+GMGLS+GTM AG GP LYYVD++G RL G F VGSG +AYG
Sbjct: 149 ASKILANLVYSYKGMGLSMGTMCAGVTPMEGPALYYVDNDGTRLAGNLFCVGSGQTFAYG 208
Query: 193 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
VLD+ YK+DM +EA EL RR+I AT RDA SGG ++Y++ GW + +D L +
Sbjct: 209 VLDAEYKYDMEEDEALELGRRSILAATHRDAYSGGFVNLYHIKEEGWVRHGFNDTNPLFW 268
Query: 253 HY 254
Y
Sbjct: 269 KY 270
>gi|389642645|ref|XP_003718955.1| proteasome component PRE2 [Magnaporthe oryzae 70-15]
gi|351641508|gb|EHA49371.1| proteasome component PRE2 [Magnaporthe oryzae 70-15]
Length = 284
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/243 (54%), Positives = 170/243 (69%), Gaps = 11/243 (4%)
Query: 20 ELC---PELS---AAPSFSLP---LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVA 70
+LC P LS A P + P L T D+ + +K A GTTTLAF F+ G++VA
Sbjct: 26 DLCDSVPSLSLKFAVPPVAHPSSWLRTATDD-HANPNCPIKIAHGTTTLAFRFQGGIIVA 84
Query: 71 ADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRIS 130
DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRIS
Sbjct: 85 TDSRATAGNWIASQTVKKVIEINSCLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRIS 144
Query: 131 VTGASKLLANILYSYRGMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPY 189
V ASK+LAN++Y Y+GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +
Sbjct: 145 VAAASKILANLVYQYKGMGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTF 204
Query: 190 AYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGE 249
AYGVLD+ YK+D+S E+A EL RR+I AT RDA SGG ++Y+V +GW K +D
Sbjct: 205 AYGVLDAEYKYDLSDEDALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNP 264
Query: 250 LHY 252
+ +
Sbjct: 265 IFW 267
>gi|358392916|gb|EHK42320.1| hypothetical protein TRIATDRAFT_135900 [Trichoderma atroviride IMI
206040]
Length = 285
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/226 (58%), Positives = 164/226 (72%), Gaps = 5/226 (2%)
Query: 17 SGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRAS 76
SG+ P + A PS L +TD D D + H GTTTLAF F+ G++VA DSRA+
Sbjct: 36 SGNFAMPPV-AQPSAWLRAATD-DRSNPDCPIKIAH--GTTTLAFRFQGGIIVATDSRAT 91
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK
Sbjct: 92 AGNWIASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASK 151
Query: 137 LLANILYSYRGMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD 195
+LAN++YSY+GMGLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLD
Sbjct: 152 ILANLIYSYKGMGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLD 211
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
S YK+D++ EEA EL +R+I AT RDA SGG ++Y+V GW K
Sbjct: 212 SEYKYDLTDEEALELGKRSILAATHRDAYSGGYINLYHVKEAGWVK 257
>gi|10803370|emb|CAC13117.1| low molecular mass polypeptide subunit PSMB8 [Takifugu rubripes]
Length = 272
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/228 (55%), Positives = 156/228 (68%), Gaps = 7/228 (3%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++PL D F K ++ GTTTLAF FK GV+VA DSRAS G YISSQ
Sbjct: 43 FAVPLGVDPSMFIKSCNNEAGVDIELDHGTTTLAFKFKHGVIVAVDSRASAGKYISSQDA 102
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN Y+LGTM+G AADC +W R L +CRL+ L N RISV ASKLLAN++ YR
Sbjct: 103 KKVIEINSYLLGTMSGSAADCMYWERLLAKECRLYRLRNNHRISVAAASKLLANMMLGYR 162
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ LYYVD G R G FS GSG+ YAY V+DSG + DM++EE
Sbjct: 163 GMGLSVGSMICGWDKQ---LYYVDENGNRFSGQMFSTGSGNSYAYAVVDSGLREDMTVEE 219
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A +L RR I +AT RDA SGGV ++Y++ +GW K+ DDV +L + Y
Sbjct: 220 AYDLGRRGIVYATHRDAYSGGVVNMYHMMEDGWIKVCQDDVSQLIHLY 267
>gi|340383914|ref|XP_003390461.1| PREDICTED: proteasome subunit beta type-5-like [Amphimedon
queenslandica]
Length = 197
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 138/173 (79%)
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
SSQ+VKK+IEINPY+LGTMAGGAADC +W R L +CR++EL NK RISV ASKLLAN+
Sbjct: 3 SSQTVKKVIEINPYLLGTMAGGAADCAYWERQLSFECRIYELRNKERISVAAASKLLANM 62
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ Y+G GLS+GTMI GWD+ GPG+YYVD++G R FSVGSGS YAYGV+DS YK+
Sbjct: 63 VSYYKGYGLSMGTMICGWDKKGPGIYYVDTDGNRFTNNIFSVGSGSTYAYGVIDSTYKWS 122
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
MSIEEA EL +RAIYHAT+RD+ SGGV ++Y+V +GW K+S DV LHY Y
Sbjct: 123 MSIEEARELGKRAIYHATYRDSYSGGVVNLYHVQEDGWTKVSQTDVKTLHYQY 175
>gi|302307794|ref|NP_984534.2| AEL326Cp [Ashbya gossypii ATCC 10895]
gi|299789172|gb|AAS52358.2| AEL326Cp [Ashbya gossypii ATCC 10895]
gi|374107748|gb|AEY96655.1| FAEL326Cp [Ashbya gossypii FDAG1]
Length = 285
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 166/236 (70%), Gaps = 6/236 (2%)
Query: 21 LCPELSAAPSFSLP---LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASM 77
L P +S AP P L D+ K+ +K A GTTTLAF F+ G++VA DSRA+
Sbjct: 38 LTPRISVAP-VDRPYEFLRAHTDD-SKNPDCRIKIAHGTTTLAFRFQGGIVVAVDSRATA 95
Query: 78 GGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKL 137
G +I+SQ+VKK+IEINP++LGTMAGGAADCQ+W LG +CRLHEL K RISV ASK+
Sbjct: 96 GQWIASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGAQCRLHELKEKERISVAAASKI 155
Query: 138 LANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDS 196
L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLD+
Sbjct: 156 LSNLVYEYKGAGLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVLDT 215
Query: 197 GYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
Y++D+S+E+A L +R+I A RDA SGG ++Y+V NGW DVG L +
Sbjct: 216 NYRWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTENGWVYHGNHDVGALFW 271
>gi|451853015|gb|EMD66309.1| hypothetical protein COCSADRAFT_112600 [Cochliobolus sativus
ND90Pr]
gi|452002583|gb|EMD95041.1| hypothetical protein COCHEDRAFT_1191789 [Cochliobolus
heterostrophus C5]
Length = 283
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 168/239 (70%), Gaps = 12/239 (5%)
Query: 23 PELSAAPSFSLP--------LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
PELS F+LP L D++ + +K A GTTTLAF FK G++VA DSR
Sbjct: 31 PELSL--KFALPPVAQSASWLRAMTDDY-SNPNCPIKIAHGTTTLAFRFKGGIIVATDSR 87
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV A
Sbjct: 88 ATAGNWIASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAA 147
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGV 193
SK+LAN++YSY+GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYGV
Sbjct: 148 SKILANLVYSYKGMGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGV 207
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
LD+ YK+D+ +EA EL RR+I AT RDA SGG ++Y+V +GW K +D + +
Sbjct: 208 LDAQYKYDLEDDEALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIFW 266
>gi|396498929|ref|XP_003845348.1| similar to proteasome subunit beta type-5 [Leptosphaeria maculans
JN3]
gi|312221929|emb|CBY01869.1| similar to proteasome subunit beta type-5 [Leptosphaeria maculans
JN3]
Length = 283
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 168/239 (70%), Gaps = 12/239 (5%)
Query: 23 PELSAAPSFSLP--------LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
PELS F+LP L D++ + +K A GTTTLAF FK G++VA DSR
Sbjct: 31 PELSL--KFALPPVAQSASWLRAMTDDY-SNPNCPIKIAHGTTTLAFRFKGGIIVATDSR 87
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV A
Sbjct: 88 ATAGNWIASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAA 147
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGV 193
SK+LAN++YSY+GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYGV
Sbjct: 148 SKILANLVYSYKGMGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGV 207
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
LD+ YK+D+ +EA EL RR+I AT RDA SGG ++Y+V +GW K +D + +
Sbjct: 208 LDASYKYDLEDDEALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIFW 266
>gi|401840711|gb|EJT43416.1| PRE2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 287
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 167/238 (70%), Gaps = 8/238 (3%)
Query: 20 ELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
L P L+ A+P L TD D D + + H GTTTLAF F+ G++VA DSRA
Sbjct: 39 HLAPTLTVPPIASPQQFLRAHTD-DSRNPDCRIKIAH--GTTTLAFRFQGGIVVAVDSRA 95
Query: 76 SMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGAS 135
+ G +++SQ+VKK+IEINP++LGT+AGGAADCQFW LG +CRLHEL K RISV AS
Sbjct: 96 TAGNWVASQTVKKVIEINPFLLGTLAGGAADCQFWETWLGSQCRLHELREKERISVAAAS 155
Query: 136 KLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
K+L+N++Y Y+G GLS+GTM+ G+ + GP +YYVDS+G RLKG F VGSG +AYGVL
Sbjct: 156 KILSNLVYQYKGAGLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVL 215
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
DS YK+D+S+E+A L +R+I A RDA SGG ++Y+V +GW D+GEL +
Sbjct: 216 DSNYKWDLSVEDALYLGKRSILAAAHRDAFSGGSVNLYHVTEDGWIYHGNHDIGELFW 273
>gi|46125017|ref|XP_387062.1| hypothetical protein FG06886.1 [Gibberella zeae PH-1]
gi|408388279|gb|EKJ67965.1| hypothetical protein FPSE_11776 [Fusarium pseudograminearum CS3096]
Length = 283
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/227 (56%), Positives = 164/227 (72%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 43 AQPSSWLRAATDD---RSNPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 99
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 100 KKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYK 159
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLD+ YK+++S E
Sbjct: 160 GMGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYKYELSDE 219
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA EL +R+I AT RDA SGG ++Y+V GW K +D + +
Sbjct: 220 EALELGKRSILAATHRDAYSGGYINLYHVKEEGWVKHGFNDTNPIFW 266
>gi|403213903|emb|CCK68405.1| hypothetical protein KNAG_0A07520 [Kazachstania naganishii CBS
8797]
Length = 287
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 167/235 (71%), Gaps = 8/235 (3%)
Query: 19 DELCPELS----AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
+++ P LS A+P L TD K+ +K A GTTTLAF F+ G++VA DSR
Sbjct: 38 EQMVPRLSVPPIASPQAFLRAHTDD---SKNPDCEIKIAHGTTTLAFRFQGGIVVAVDSR 94
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRL+EL K+RI+V A
Sbjct: 95 ATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLYELKEKQRITVAAA 154
Query: 135 SKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGV 193
SK+LAN++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGV
Sbjct: 155 SKILANLVYQYKGAGLSMGTMICGYTKKEGPTVYYVDSDGTRLKGDVFCVGSGQTFAYGV 214
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVG 248
LD+ YK+D+S+E+A L +RAI AT RDA SGG ++Y+V GW DVG
Sbjct: 215 LDTNYKWDLSVEDALYLGKRAILAATHRDAYSGGSINLYHVTEQGWVFHGNHDVG 269
>gi|261199568|ref|XP_002626185.1| proteasome component PRE2 [Ajellomyces dermatitidis SLH14081]
gi|239594393|gb|EEQ76974.1| proteasome component PRE2 [Ajellomyces dermatitidis SLH14081]
gi|239615558|gb|EEQ92545.1| proteasome component PRE2 [Ajellomyces dermatitidis ER-3]
gi|327354709|gb|EGE83566.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 283
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/231 (54%), Positives = 164/231 (70%), Gaps = 5/231 (2%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P + SF ++ D + +K A GTTTLAF FK G++VA DSRA+ G +I+
Sbjct: 40 PPVDKPASFLRAVTDD----HANPDCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIA 95
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++
Sbjct: 96 SQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLV 155
Query: 143 YSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
Y+Y+GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYGVLD+ Y+FD
Sbjct: 156 YNYKGMGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRFD 215
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
++ EEA EL RR+I AT RDA SGG ++Y+V GW+K +D + +
Sbjct: 216 LTDEEALELGRRSILAATHRDAYSGGYINLYHVKEAGWEKHGFNDTNPIFW 266
>gi|225192934|dbj|BAH29709.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192940|dbj|BAH29705.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 149/208 (71%), Gaps = 4/208 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTTL+F FK GV+VA DSRAS G YI++
Sbjct: 41 FAIPVGEEPVGFLKSCNTEGGARFELHHGTTTLSFKFKHGVIVAVDSRASTGSYIATCEY 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 101 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR 160
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSGS YAYGVLDSGYK DM++EE
Sbjct: 161 GMGLSVGSMICGWDKEGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEE 220
Query: 207 AAELARRAIYHATFRDAASGGVASVYYV 234
A EL RR I HAT RD+ SGGV ++Y++
Sbjct: 221 AYELGRRGIVHATHRDSYSGGVVNMYHI 248
>gi|302915857|ref|XP_003051739.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732678|gb|EEU46026.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 282
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/227 (56%), Positives = 163/227 (71%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD D D + H GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 42 AQPSSWLRAATD-DRSNPDCPIKIAH--GTTTLAFRFQGGIIVATDSRATAGNWIASQTV 98
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 99 KKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYK 158
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLD+ Y++D++ E
Sbjct: 159 GMGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDE 218
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA EL +R+I AT RDA SGG ++Y+V GW K +D + +
Sbjct: 219 EALELGKRSILAATHRDAYSGGFINLYHVKEEGWVKHGFNDTNPIFW 265
>gi|340914624|gb|EGS17965.1| hypothetical protein CTHT_0059780 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 283
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 152/193 (78%), Gaps = 1/193 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K A GTTTLAF FKEG++VA DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+
Sbjct: 64 IKIAHGTTTLAFRFKEGIIVATDSRATAGNWIASQTVKKVIEINSELLGTMAGGAADCQY 123
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAG-WDETGPGLYY 168
W LG++CRLHEL +KRRISV ASK+LAN++Y Y+GMGLS+GTM AG E GP LYY
Sbjct: 124 WLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYKGMGLSMGTMCAGVTKEEGPALYY 183
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA +LA R+I AT RDA SGG
Sbjct: 184 IDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTTEEALDLASRSILAATHRDAYSGGY 243
Query: 229 ASVYYVGPNGWKK 241
++Y+V +GW K
Sbjct: 244 INLYHVKESGWVK 256
>gi|225192961|dbj|BAH29693.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192990|dbj|BAH29623.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193005|dbj|BAH29633.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193020|dbj|BAH29643.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193071|dbj|BAH29677.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 149/208 (71%), Gaps = 4/208 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTTL+F FK GV+VA DSRAS G YI++
Sbjct: 41 FAVPVGEEPVGFLKSCNTEGGARFELHHGTTTLSFKFKHGVIVAVDSRASTGSYIATCEY 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 101 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR 160
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSGS YAYGVLDSGYK DM++EE
Sbjct: 161 GMGLSVGSMICGWDKEGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEE 220
Query: 207 AAELARRAIYHATFRDAASGGVASVYYV 234
A EL RR I HAT RD+ SGGV ++Y++
Sbjct: 221 AYELGRRGIVHATHRDSYSGGVVNMYHI 248
>gi|386868057|dbj|BAM15298.1| proteasome subunit beta type 8, partial [Triakis scyllium]
Length = 194
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 142/178 (79%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K GTTTLAF F+ GVMVA DSRAS G YI +Q+ KK+IEINPY+LGTM+G AADC +
Sbjct: 17 IKLHHGTTTLAFKFQHGVMVAVDSRASAGSYIDTQTFKKVIEINPYLLGTMSGSAADCVY 76
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R L +CR+++L NK+RISV+ ASKLLAN++ Y+GMGLS+GTMI GWD+ GPGLYYV
Sbjct: 77 WERMLAKQCRIYKLRNKKRISVSAASKLLANMVSEYKGMGLSMGTMICGWDDKGPGLYYV 136
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGG 227
G RL G FS GSGS YAYGV+DSGYK+D+S++EA LA+ AIYHAT RDA SGG
Sbjct: 137 SGNGVRLAGNMFSTGSGSLYAYGVMDSGYKYDLSVQEAYNLAQHAIYHATHRDAYSGG 194
>gi|336267034|ref|XP_003348283.1| hypothetical protein SMAC_02780 [Sordaria macrospora k-hell]
gi|380091937|emb|CCC10203.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 291
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 165/227 (72%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 44 AHPSSWLRAATDD---RANPSCPIKIAHGTTTLAFRFQGGIVVATDSRATAGNWIASQTV 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 101 KKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYK 160
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ E
Sbjct: 161 GMGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTTE 220
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA EL RR+I AT RDA SGG ++Y+V +GW++ +D + +
Sbjct: 221 EALELGRRSILAATHRDAYSGGFINLYHVKESGWERHGFNDTNPIFW 267
>gi|302414704|ref|XP_003005184.1| proteasome component PRE2 [Verticillium albo-atrum VaMs.102]
gi|261356253|gb|EEY18681.1| proteasome component PRE2 [Verticillium albo-atrum VaMs.102]
gi|346979440|gb|EGY22892.1| proteasome component PRE2 [Verticillium dahliae VdLs.17]
Length = 286
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/227 (57%), Positives = 162/227 (71%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD D D + H GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 46 AHPSSWLRAATD-DRSNPDCPIKIAH--GTTTLAFRFQGGIIVATDSRATAGNWIASQTV 102
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 103 KKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYK 162
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLD+ YK+++S E
Sbjct: 163 GMGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYKYELSDE 222
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA EL RR+I AT RDA SGG ++Y+V GW K D + +
Sbjct: 223 EALELGRRSILAATHRDAYSGGFINLYHVKEAGWVKHGFSDTNPIFW 269
>gi|225192937|dbj|BAH29707.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 149/208 (71%), Gaps = 4/208 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTTL+F FK GV+VA DSRAS G Y+ +
Sbjct: 41 FAIPVGEEPVGFLKSCNTEGGARFELHHGTTTLSFKFKHGVIVAVDSRASTGSYVDTCEY 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 101 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR 160
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD+ G RL G FS GSGS YAYGVLDSGYK DM++EE
Sbjct: 161 GMGLSVGSMICGWDKEGPGIYYVDANGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEE 220
Query: 207 AAELARRAIYHATFRDAASGGVASVYYV 234
A EL RR I HAT RD+ SGGV ++Y++
Sbjct: 221 AYELGRRGIVHATHRDSYSGGVVNMYHI 248
>gi|85111469|ref|XP_963951.1| proteasome component PRE2 precursor [Neurospora crassa OR74A]
gi|28925704|gb|EAA34715.1| proteasome component PRE2 precursor [Neurospora crassa OR74A]
Length = 291
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/228 (54%), Positives = 165/228 (72%), Gaps = 4/228 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 44 AHPSSWLRAATDD---RANPSCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 101 KKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYK 160
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D+++E
Sbjct: 161 GMGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTVE 220
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
EA EL R+I AT RDA SGG ++Y+V +GW+K +D + +
Sbjct: 221 EALELGSRSILAATHRDAYSGGFINLYHVKESGWEKHGFNDTNPIFWR 268
>gi|366988633|ref|XP_003674083.1| hypothetical protein NCAS_0A11440 [Naumovozyma castellii CBS 4309]
gi|342299946|emb|CCC67702.1| hypothetical protein NCAS_0A11440 [Naumovozyma castellii CBS 4309]
Length = 287
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/233 (52%), Positives = 164/233 (70%), Gaps = 8/233 (3%)
Query: 28 APSFSLPLSTDFDEF-------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
APS S+P +F ++ +K A GTTTLAF F+ G++VA DSRA+ G +
Sbjct: 41 APSISVPPIASPQQFLRAHTDDSQNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRATAGNW 100
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV ASK+L+N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELKEKERISVAAASKILSN 160
Query: 141 ILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLD+ YK
Sbjct: 161 LVYQYKGAGLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDTNYK 220
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+D+++E+A L +R+I A RDA SGG ++Y+V +GW DVG+ +
Sbjct: 221 WDLTVEDALYLGKRSILAAAHRDAYSGGSINLYHVTESGWIYHGNHDVGQTFW 273
>gi|225193029|dbj|BAH29649.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193056|dbj|BAH29667.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 148/208 (71%), Gaps = 4/208 (1%)
Query: 31 FSLPLSTDFDEFQKDTK----ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F K A + GTTTL+F FK GV+VA DSRAS G YI +
Sbjct: 41 FAVPVGEEPVGFLKSCNTEGGARFELHHGTTTLSFKFKHGVIVAVDSRASTGSYIDTCEY 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADC++W R L +CRL+ L N RISV ASKLL N++ YR
Sbjct: 101 NKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR 160
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPG+YYVD G RL G FS GSGS YAYGVLDSGYK DM++EE
Sbjct: 161 GMGLSVGSMICGWDKDGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEE 220
Query: 207 AAELARRAIYHATFRDAASGGVASVYYV 234
A EL RR I HAT RD+ SGGV ++Y++
Sbjct: 221 AYELGRRGIVHATHRDSYSGGVVNMYHI 248
>gi|330932201|ref|XP_003303688.1| hypothetical protein PTT_16006 [Pyrenophora teres f. teres 0-1]
gi|311320144|gb|EFQ88213.1| hypothetical protein PTT_16006 [Pyrenophora teres f. teres 0-1]
Length = 283
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/239 (53%), Positives = 168/239 (70%), Gaps = 12/239 (5%)
Query: 23 PELSAAPSFSLP--------LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
PELS F+LP L D++ + +K A GTTTLAF FK G++VA DSR
Sbjct: 31 PELSL--KFALPPVAQSASWLRAMTDDYS-NPNCPIKIAHGTTTLAFRFKGGIIVATDSR 87
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV A
Sbjct: 88 ATAGNWIASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAA 147
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGV 193
SK+LAN++YSY+GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYGV
Sbjct: 148 SKILANLIYSYKGMGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGV 207
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
LD+ YK+++ +EA EL RR+I AT RDA SGG ++Y+V +GW K +D + +
Sbjct: 208 LDASYKYELEDDEALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIFW 266
>gi|336464534|gb|EGO52774.1| proteasome component PRE2 precursor [Neurospora tetrasperma FGSC
2508]
gi|350296625|gb|EGZ77602.1| proteasome component PRE2 precursor [Neurospora tetrasperma FGSC
2509]
Length = 291
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/228 (54%), Positives = 165/228 (72%), Gaps = 4/228 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 44 AHPSSWLRAATDD---RANPSCPIKIAHGTTTLAFRFQGGIVVATDSRATAGNWIASQTV 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 101 KKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYK 160
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D+++E
Sbjct: 161 GMGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTVE 220
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
EA EL R+I AT RDA SGG ++Y+V +GW+K +D + +
Sbjct: 221 EALELGSRSILAATHRDAYSGGFINLYHVKESGWEKHGFNDTNPIFWR 268
>gi|225192981|dbj|BAH29681.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 150/210 (71%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL RR I HAT RDA SGG ++Y++
Sbjct: 221 EEAYELGRRGIAHATHRDAYSGGSVNMYHM 250
>gi|189192022|ref|XP_001932350.1| proteasome subunit beta type-5 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187973956|gb|EDU41455.1| proteasome subunit beta type-5 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 283
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/239 (53%), Positives = 168/239 (70%), Gaps = 12/239 (5%)
Query: 23 PELSAAPSFSLP--------LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
PELS F+LP L D++ + +K A GTTTLAF FK G++VA DSR
Sbjct: 31 PELSL--KFALPPVAQSASWLRAMTDDYS-NPNCPIKIAHGTTTLAFRFKGGIIVATDSR 87
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV A
Sbjct: 88 ATAGNWIASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAA 147
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGV 193
SK+LAN++YSY+GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYGV
Sbjct: 148 SKILANLVYSYKGMGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGV 207
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
LD+ YK+++ +EA EL RR+I AT RDA SGG ++Y+V +GW K +D + +
Sbjct: 208 LDASYKYELEDDEALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIFW 266
>gi|400602517|gb|EJP70119.1| proteasome component PRE2 [Beauveria bassiana ARSEF 2860]
Length = 285
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/227 (55%), Positives = 163/227 (71%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 45 AHPSAWLRAATDD---RSNPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 101
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 102 KKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYK 161
Query: 147 GMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVD++G RL G F VGSG +AYGVLD+ Y +D+S E
Sbjct: 162 GMGLSMGTMCAGVTPEEGPALYYVDNDGTRLAGNLFCVGSGQTFAYGVLDAEYNYDLSDE 221
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+A EL RR+I AT RDA SGG ++Y+V GW K +D + +
Sbjct: 222 DALELGRRSILAATHRDAYSGGYINLYHVKQEGWVKHGFNDTNPIFW 268
>gi|440638272|gb|ELR08191.1| 20S proteasome subunit beta 5 [Geomyces destructans 20631-21]
Length = 285
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/227 (55%), Positives = 162/227 (71%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 45 AQPSSWLRAATDD---YSNPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 101
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL KRRI+V ASK+LANI+YSY+
Sbjct: 102 KKVIEINNSLLGTMAGGAADCQYWLAYLGMQCRLHELRQKRRITVAAASKILANIVYSYK 161
Query: 147 GMGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D+S E
Sbjct: 162 GMGLSMGTMCAGVTPSEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLSEE 221
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA EL RR+I AT RDA SGG ++Y+V GW K +D + +
Sbjct: 222 EALELGRRSILAATHRDAYSGGYINLYHVKEEGWVKHGFNDTNPIFW 268
>gi|440301472|gb|ELP93858.1| proteasome subunit beta type-5 precursor, putative [Entamoeba
invadens IP1]
Length = 254
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/218 (54%), Positives = 156/218 (71%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
+H KGTTTLA I KEG++VA DSRA+ G +ISSQSV+K I I +++GTMAGGAADC +W
Sbjct: 36 RHKKGTTTLAMIIKEGIVVAVDSRATRGAFISSQSVQKYIPITSHIVGTMAGGAADCSYW 95
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R L +CRL EL N+ ISV ASK+ ANILY Y+ LSVG+MI+G+D+TGP +YYV+
Sbjct: 96 ERELTRRCRLFELRNRPPISVAAASKIFANILYHYKNYDLSVGSMISGFDKTGPHIYYVE 155
Query: 171 SEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVAS 230
G R+ G FSVGSGSP+A V+D+ Y ++M E+A ELARRAI+HAT RD ASGG +
Sbjct: 156 DGGVRIPGNIFSVGSGSPFAVSVIDTEYDYNMGKEKAIELARRAIFHATHRDVASGGNVN 215
Query: 231 VYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268
V ++ NGWK +S +D +L+Y + + + M E
Sbjct: 216 VLFIDQNGWKLISRNDCYDLYYDRFNIEEYQKHKPMDE 253
>gi|452840694|gb|EME42632.1| hypothetical protein DOTSEDRAFT_73463 [Dothistroma septosporum
NZE10]
Length = 284
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 168/242 (69%), Gaps = 10/242 (4%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAA 71
++L P LS F++P ++ + + +K A GTTTLAF FK G++VA
Sbjct: 28 NDLTPSLSL--KFAMPPIASSQQWLRAMTDDHSNPNCPIKIAHGTTTLAFRFKGGIIVAT 85
Query: 72 DSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 131
DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRI+V
Sbjct: 86 DSRATAGNWIASQTVKKVIEINSALLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRITV 145
Query: 132 TGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYA 190
ASK+LAN++YSY+GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +A
Sbjct: 146 CAASKILANLVYSYKGMGLSMGTMCAGVTPSEGPALYYIDSDGTRLAGNLFCVGSGQTFA 205
Query: 191 YGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 250
YGVLD+ YK+D+ EEA EL RR+I AT RDA SGG ++Y+V GW K +D +
Sbjct: 206 YGVLDAEYKYDLEDEEALELGRRSILAATHRDAFSGGYINLYHVKEAGWVKHGFNDTNPI 265
Query: 251 HY 252
+
Sbjct: 266 FW 267
>gi|345564886|gb|EGX47845.1| hypothetical protein AOL_s00083g57 [Arthrobotrys oligospora ATCC
24927]
Length = 282
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 168/242 (69%), Gaps = 8/242 (3%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAA 71
DE+ L + SF LP +F + + A +K GTTTLAF ++ GV+V
Sbjct: 24 DEVTSSLPQSVSFILPPIDSPAKFLRAMTDDHTNPSAPIKLKHGTTTLAFKYQGGVIVCT 83
Query: 72 DSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 131
DSRA+ G +I+SQ+VKK+IEINPY+LGTMAGGAADCQ+W LG++CRLH+L +KR ISV
Sbjct: 84 DSRATQGSWIASQTVKKVIEINPYLLGTMAGGAADCQYWLTYLGMECRLHQLRHKRLISV 143
Query: 132 TGASKLLANILYSYRGMGLSVGTMIAGWDETGP-GLYYVDSEGGRLKGTRFSVGSGSPYA 190
ASK+LAN++YSY+GMGLS+GTM+ G G GLYYVDS+G R++G F VGSG +A
Sbjct: 144 AAASKILANLVYSYKGMGLSMGTMLTGVGHGGVFGLYYVDSDGNRVEGNLFCVGSGQTFA 203
Query: 191 YGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 250
YGVLD GYK+D++ EEA EL RR+I AT RDA SGG ++Y++ +GW DD +
Sbjct: 204 YGVLDRGYKWDLTDEEALELGRRSILAATHRDAYSGGYLNLYHIQKDGWVHHGFDDTNPV 263
Query: 251 HY 252
+
Sbjct: 264 FW 265
>gi|148699224|gb|EDL31171.1| mCG118255 [Mus musculus]
Length = 219
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/201 (61%), Positives = 150/201 (74%), Gaps = 2/201 (0%)
Query: 15 FGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
G G +L +PS L L+ ++ + + H GTTTLAF F GV+VAADSR
Sbjct: 21 LGGGADLLDLGPGSPSDGLSLAAPSWGVPEEPRIEMLH--GTTTLAFKFLHGVIVAADSR 78
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL K RISV A
Sbjct: 79 ATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRKKERISVAAA 138
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
SKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YAYGV+
Sbjct: 139 SKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVM 198
Query: 195 DSGYKFDMSIEEAAELARRAI 215
D GY +D+ +EEA +LARRAI
Sbjct: 199 DRGYSYDLKVEEAYDLARRAI 219
>gi|452981276|gb|EME81036.1| hypothetical protein MYCFIDRAFT_55997 [Pseudocercospora fijiensis
CIRAD86]
Length = 284
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 155/204 (75%), Gaps = 1/204 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K A GTTTLAF FK G++VA DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+
Sbjct: 64 IKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEINSCLLGTMAGGAADCQY 123
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYY 168
W LG++CRLHEL +KRRISV ASK+LAN++YSY+GMGLS+GTM AG + GP LYY
Sbjct: 124 WLAYLGMQCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTPSEGPALYY 183
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
+DS+G RL G F VGSG +AYGVLD+ YK+D+ E+A EL RR+I AT RDA SGG
Sbjct: 184 IDSDGTRLAGNLFCVGSGQTFAYGVLDAEYKYDLEDEDALELGRRSILAATHRDAFSGGY 243
Query: 229 ASVYYVGPNGWKKLSGDDVGELHY 252
++Y+V +GW K +D + +
Sbjct: 244 INLYHVKEDGWVKHGFNDTNPIFW 267
>gi|367043622|ref|XP_003652191.1| hypothetical protein THITE_2065666 [Thielavia terrestris NRRL 8126]
gi|346999453|gb|AEO65855.1| hypothetical protein THITE_2065666 [Thielavia terrestris NRRL 8126]
Length = 285
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 160/216 (74%), Gaps = 4/216 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 44 AHPSAWLRAATDD---RSNPACPIKIAHGTTTLAFRFQGGIIVATDSRATAGDWIASQTV 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 101 KKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYK 160
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG +E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ E
Sbjct: 161 GMGLSMGTMCAGVTEEEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTTE 220
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
EA EL R+I AT RDA SGG ++Y+V +GW K
Sbjct: 221 EALELGSRSILAATHRDAYSGGFINLYHVKQDGWVK 256
>gi|6653277|gb|AAF22654.1| interferon-gamma inducible proteasome subunit LMP7 [Bos taurus]
Length = 193
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 147/192 (76%)
Query: 59 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKC 118
LAF F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G AADC +W R L +C
Sbjct: 1 LAFKFQHGVIVAVDSRASAGNYIATLKVNKVIEINPYLLGTMSGCAADCLYWERLLAKEC 60
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G
Sbjct: 61 RLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSG 120
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
FS GSG+ +AYGV+DSGY+ D+SIEEA +L RRAI HAT RD+ SGGV ++Y++ +G
Sbjct: 121 NMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDG 180
Query: 239 WKKLSGDDVGEL 250
W K+ DV +L
Sbjct: 181 WVKVESTDVSDL 192
>gi|67476394|ref|XP_653800.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56470790|gb|EAL48414.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407042489|gb|EKE41354.1| proteasome subunit beta type 5 precursor, putative [Entamoeba
nuttalli P19]
gi|449706891|gb|EMD46648.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 252
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 157/222 (70%)
Query: 47 KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD 106
KA +H GTTTL+ I KEG++VA DSRA+ G +ISS SV+K I I +++GTMAGGAAD
Sbjct: 30 KALTEHKHGTTTLSMIIKEGIIVAVDSRATRGAFISSGSVQKYIPITSHIIGTMAGGAAD 89
Query: 107 CQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGL 166
C +W R L +CRL EL NK ISV ASK+LANILY YR LSVG+MI G+D+TGP +
Sbjct: 90 CAYWERELTRQCRLFELRNKPPISVAAASKMLANILYQYRNYNLSVGSMICGYDKTGPHI 149
Query: 167 YYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
+YV+ G R+ G FSVGSGSPYA ++DS Y ++M E+A ELARRAI+HAT RD ASG
Sbjct: 150 FYVEDGGVRIPGHLFSVGSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASG 209
Query: 227 GVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268
G +V ++ +GW+ +S +D +L+Y +Y + +M E
Sbjct: 210 GNVNVIFIDKDGWRLISRNDCYDLYYDHYNIEEYQKHGQMEE 251
>gi|195057410|ref|XP_001995254.1| GH23050 [Drosophila grimshawi]
gi|193899460|gb|EDV98326.1| GH23050 [Drosophila grimshawi]
Length = 315
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/229 (51%), Positives = 159/229 (69%), Gaps = 1/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P AP F P + + + + K ++ GTTTL F ++ GV++ ADSRA+ G YI
Sbjct: 40 PYALMAPPFENP-AVNLVKILRHCKLRMELEHGTTTLGFKYQGGVVLCADSRATSGQYIG 98
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ+++KI+E+N YMLGT+AGGAADC +W R L +CRLHEL KRRI V A++++ NI
Sbjct: 99 SQTMRKIVELNNYMLGTLAGGAADCVYWDRVLARECRLHELRYKRRIMVDAAARMMCNIC 158
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+GMGL +G M+AG D+ G L YVDSEG R G+ FSVGSGS YA GVLD+GY++D+
Sbjct: 159 AEYKGMGLVMGMMLAGCDDEGCKLIYVDSEGMRSHGSVFSVGSGSTYALGVLDTGYRWDL 218
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
+ EEA +LARRAIYHAT +DA SGG+ +Y++ GW+ + D +LH
Sbjct: 219 TDEEAYDLARRAIYHATRKDAYSGGIVRLYHINNKGWRNICNTDCNDLH 267
>gi|453085000|gb|EMF13044.1| proteasome subunit beta type-5 precursor [Mycosphaerella populorum
SO2202]
Length = 284
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/198 (60%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ + +K A GTTTLAF FK G++VA DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGA
Sbjct: 59 NPQCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEINSALLGTMAGGA 118
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-G 163
ADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+GMGLS+GTM AG T G
Sbjct: 119 ADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTPTEG 178
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
P LYY+DS+G RL G F VGSG +AYGVLD+ YK+D+ +EA EL +R+I AT RDA
Sbjct: 179 PALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYKYDLEDDEALELGKRSILAATHRDA 238
Query: 224 ASGGVASVYYVGPNGWKK 241
SGG ++Y+V GW K
Sbjct: 239 FSGGFINLYHVKEEGWVK 256
>gi|194756128|ref|XP_001960331.1| GF13303 [Drosophila ananassae]
gi|190621629|gb|EDV37153.1| GF13303 [Drosophila ananassae]
Length = 314
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 161/232 (69%), Gaps = 1/232 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P AP F P + + + + A GTTTL F F+ GV++ ADSRA+ G YI
Sbjct: 40 PYCLMAPPFERP-AENLPKILAHCGVNMDFAHGTTTLGFKFQGGVILCADSRATSGQYIG 98
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ++KKI+E+N YMLGT+AGGAADC +W R L +CRLH+L ++R++V A++++ NI
Sbjct: 99 SQTMKKIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNIS 158
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+GMGL +G M+AG+D+ GP L YVDSEG + G FSVGSGSPYA GVLD+GY++D+
Sbjct: 159 NEYKGMGLVMGMMLAGYDDEGPKLIYVDSEGMKSSGLVFSVGSGSPYALGVLDTGYRYDL 218
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+ +EA +LA+RAIYHAT +DA SGG+ +Y++ GW+ + D +LH Y
Sbjct: 219 TDQEAYDLAKRAIYHATSKDAYSGGIVRLYHINAEGWRNICNTDCADLHDFY 270
>gi|406701686|gb|EKD04801.1| proteasome component [Trichosporon asahii var. asahii CBS 8904]
Length = 275
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/231 (55%), Positives = 159/231 (68%), Gaps = 13/231 (5%)
Query: 24 ELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
E+ P LS D + A +K A GTTTLAF FK G++VA DSRA+ G YI+S
Sbjct: 34 EVPGVPDPLAFLSLHTDSMSTNPAAKIKLAHGTTTLAFRFKGGIIVAVDSRATAGSYIAS 93
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
+VKK+IEINPY+LGTMAGGAADCQ+W LG++CRLHEL NK RISV ASK+L+NI+Y
Sbjct: 94 GTVKKVIEINPYLLGTMAGGAADCQYWETYLGMQCRLHELRNKERISVAAASKILSNIVY 153
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
Y+GMGLS+ GP L+YVDS+G RLKG FSVGSGS YAYGVLD ++D+S
Sbjct: 154 QYKGMGLSM----------GPALFYVDSDGQRLKGDLFSVGSGSTYAYGVLD---QWDLS 200
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
E+A EL RR+I A RDA SG ++Y+V NGW+ + D+ EL Y Y
Sbjct: 201 DEDAQELGRRSICAAGHRDAYSGNTINLYHVRENGWEFIDNYDLSELWYKY 251
>gi|391339227|ref|XP_003743953.1| PREDICTED: proteasome subunit beta type-5-like [Metaseiulus
occidentalis]
Length = 280
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 152/212 (71%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L KGTTT AF++K G++V ADSRA+ G +I S +VKKII +N Y+LGTMAGGAADC +
Sbjct: 68 LDFDKGTTTCAFVYKGGLVVCADSRATGGSFIGSGTVKKIIVVNSYVLGTMAGGAADCSY 127
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R L +CRL+EL NK ISV ASKL +N+LYSY+GMGLS+G M+ G+D+ GP LYYV
Sbjct: 128 WLRVLSERCRLYELRNKEPISVAAASKLFSNMLYSYKGMGLSLGVMLMGFDKRGPALYYV 187
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D EG RL G FS GSGSP A GVLDSGYK+D+ E+A EL RRAI ATFRD+ SGG+
Sbjct: 188 DDEGNRLSGQMFSAGSGSPNALGVLDSGYKWDLEDEDAYELGRRAITAATFRDSYSGGIV 247
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHYYPVTPST 261
Y++ P+GW + +D L+ Y ST
Sbjct: 248 RCYHLKPDGWVHVGDEDCMVLYEKYNGAPKST 279
>gi|119193488|ref|XP_001247350.1| proteasome component [Coccidioides immitis RS]
gi|303312031|ref|XP_003066027.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105689|gb|EER23882.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320040001|gb|EFW21935.1| proteasome component [Coccidioides posadasii str. Silveira]
gi|392863404|gb|EAS35847.2| proteasome component [Coccidioides immitis RS]
Length = 283
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/231 (53%), Positives = 164/231 (70%), Gaps = 5/231 (2%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P +S SF ++ D + + +K A GTTTLAF F+ G++VA DSRA+ G +I+
Sbjct: 40 PPISQPASFLRAMTDD----HANPECPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIA 95
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ+VKK+IEIN +LGTMAGGAADCQ+W LG+ CRLHEL +KRRISV ASKLLAN++
Sbjct: 96 SQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMLCRLHELRHKRRISVAAASKLLANLV 155
Query: 143 YSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
Y+Y+GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D
Sbjct: 156 YNYKGMGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYD 215
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
++ EEA L RR+I A RDA SGG ++Y+V +GW K +D+ + +
Sbjct: 216 LTEEEALNLGRRSILAAMHRDAYSGGFVNLYHVKEDGWVKHGFNDMNPIFW 266
>gi|47216876|emb|CAG11683.1| unnamed protein product [Tetraodon nigroviridis]
Length = 270
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/228 (56%), Positives = 160/228 (70%), Gaps = 4/228 (1%)
Query: 31 FSLPLSTDFDEFQKDTKA----TLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
++PL D F K + ++ GTTTLAF F +GV+VA DSRAS G YI+S
Sbjct: 40 LAVPLGVDPSTFLKSCNSEAGVNIELHHGTTTLAFKFNQGVIVAVDSRASAGSYIASPVA 99
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTM+G AADC +W R L +CRL+ L N RRISV ASKLLAN++ YR
Sbjct: 100 KKVIEINPYLLGTMSGSAADCMYWERLLAKECRLYRLRNNRRISVAAASKLLANMMLGYR 159
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPGLYYVD G R G FS GSG+ YAY V+D+G + DMS+EE
Sbjct: 160 GMGLSVGSMICGWDKQGPGLYYVDENGNRFPGQMFSTGSGNSYAYAVVDNGLRADMSVEE 219
Query: 207 AAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
A EL RR I +AT RDA SGGV ++Y++ +GW K+ DDV +L + Y
Sbjct: 220 AYELGRRGIAYATHRDAYSGGVVNMYHMKEDGWVKVCMDDVSQLLHGY 267
>gi|218552|dbj|BAA02403.1| proteasome subunit pts1+ [Schizosaccharomyces pombe]
gi|742350|prf||2009376A proteasome:SUBUNIT=pts1
Length = 215
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/196 (61%), Positives = 152/196 (77%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF ++ G++V DSRAS G I+SQ+VKK+IEINPY+LGT+AGGAADCQFW L
Sbjct: 4 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVL 63
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
G++CRLH+L NK ISV+ ASK+L+NI YSY+G GLS+GTM+AG + G LYY+DS+G
Sbjct: 64 GMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSDGT 123
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
RLKG FSVGSGS +AYGVLDSGY++D+S +EA LA+R+I AT RDA SGG ++Y++
Sbjct: 124 RLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDAYSGGSVNLYHI 183
Query: 235 GPNGWKKLSGDDVGEL 250
NGW DV L
Sbjct: 184 DENGWVFHGNFDVDSL 199
>gi|346324481|gb|EGX94078.1| proteasome component PRE2 precursor [Cordyceps militaris CM01]
Length = 284
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/228 (55%), Positives = 162/228 (71%), Gaps = 4/228 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 45 AQPSAWLRAATDD---RSNPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 101
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 102 KKVIEINNVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYK 161
Query: 147 GMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVD++G RL G F VGSG +AYGVLD+ Y++D++ E
Sbjct: 162 GMGLSMGTMCAGVTAEEGPALYYVDNDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDE 221
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
EA EL R+I AT RDA SGG ++Y+V GW K D + +
Sbjct: 222 EALELGSRSILAATHRDAYSGGSINLYHVKQEGWVKHGFRDTNPIFWQ 269
>gi|225193053|dbj|BAH29665.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+GGAADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGGAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM +
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMIV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
>gi|167540121|ref|XP_001741562.1| proteasome subunit beta type-5 precursor [Entamoeba dispar SAW760]
gi|165893870|gb|EDR21989.1| proteasome subunit beta type-5 precursor, putative [Entamoeba
dispar SAW760]
Length = 252
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 157/222 (70%)
Query: 47 KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD 106
KA +H GTTTL+ I KEG++VA DSRA+ G +ISS SV+K I I +++GTMAGGAAD
Sbjct: 30 KALSEHKHGTTTLSMIIKEGIIVAVDSRATRGAFISSGSVQKYIPITSHIIGTMAGGAAD 89
Query: 107 CQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGL 166
C +W R L +CRL EL NK ISV ASK+LANILY YR LSVG+MI G+D+TGP +
Sbjct: 90 CAYWERELTRQCRLFELRNKPPISVAAASKMLANILYQYRNYNLSVGSMICGYDKTGPHI 149
Query: 167 YYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
+YV+ G R+ G FSVGSGSPYA ++DS Y ++M E+A ELARRAI+HAT RD ASG
Sbjct: 150 FYVEDGGVRIPGHLFSVGSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASG 209
Query: 227 GVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268
G +V ++ +GW+ +S +D +L+Y +Y + +M E
Sbjct: 210 GNVNVIFIDKDGWRLISRNDCYDLYYDHYNIEEYQKHGQMEE 251
>gi|154297340|ref|XP_001549097.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347835839|emb|CCD50411.1| similar to proteasome component Pre2 [Botryotinia fuckeliana]
Length = 282
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/227 (55%), Positives = 161/227 (70%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 42 AHPSAWLRAATDD---HANPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 98
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 99 KKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYRYK 158
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y +D+S E
Sbjct: 159 GMGLSMGTMCAGVTKEEGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYSYDLSEE 218
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
A EL RR+I AT RDA SGG ++Y+V +GW K +D + +
Sbjct: 219 AALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIFW 265
>gi|406867649|gb|EKD20687.1| proteasome A-type and B-type [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 282
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 162/227 (71%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 42 AHPSAWLRAATDD---HANPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 98
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 99 KKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYSYK 158
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ E
Sbjct: 159 GMGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEE 218
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA L R+I AT RDA SGG ++Y+V +GW K +D + +
Sbjct: 219 EALSLGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIFW 265
>gi|226292176|gb|EEH47596.1| proteasome component PRE2 [Paracoccidioides brasiliensis Pb18]
Length = 283
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 156/209 (74%), Gaps = 1/209 (0%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGA
Sbjct: 58 NPNCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEINSCLLGTMAGGA 117
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETG 163
ADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GMGLS+GTM AG + G
Sbjct: 118 ADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQEG 177
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
P LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA EL RR+I AT RDA
Sbjct: 178 PALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAATHRDA 237
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGELHY 252
SGG ++Y++ GW+K D + +
Sbjct: 238 YSGGFINLYHIKEAGWEKHGFSDTNPIFW 266
>gi|295673490|ref|XP_002797291.1| proteasome component PRE2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282663|gb|EEH38229.1| proteasome component PRE2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 283
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 156/209 (74%), Gaps = 1/209 (0%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGA
Sbjct: 58 NPNCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEINSCLLGTMAGGA 117
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETG 163
ADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GMGLS+GTM AG + G
Sbjct: 118 ADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQEG 177
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
P LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA EL RR+I AT RDA
Sbjct: 178 PALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAATHRDA 237
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGELHY 252
SGG ++Y++ GW+K D + +
Sbjct: 238 YSGGFINLYHIKEAGWEKHGFSDTNPIFW 266
>gi|146414580|ref|XP_001483260.1| hypothetical protein PGUG_03989 [Meyerozyma guilliermondii ATCC
6260]
gi|146391733|gb|EDK39891.1| hypothetical protein PGUG_03989 [Meyerozyma guilliermondii ATCC
6260]
Length = 281
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/231 (54%), Positives = 162/231 (70%), Gaps = 5/231 (2%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P +S +F L TD D D K + H GTTTLAF FK G++VA DSRA+ G +I+
Sbjct: 41 PPISQPAAF-LRAHTD-DASNPDCKIKIAH--GTTTLAFRFKGGIIVAVDSRATAGNWIA 96
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ+V K+I INP +LGTMAGGAADCQ+W LG +CRLHEL K RISV ASK+L+N++
Sbjct: 97 SQTVNKVIRINPMLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAASKILSNLI 156
Query: 143 YSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
Y Y+GMGLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGV+D+G K+D
Sbjct: 157 YEYKGMGLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVVDAGLKWD 216
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
MS+E+A L +R I AT RDA SGG ++Y+V GW +VG++ +
Sbjct: 217 MSVEDALYLGKRGILAATHRDAYSGGSINLYHVTEQGWVYHGNHNVGDIFW 267
>gi|225681120|gb|EEH19404.1| proteasome subunit beta type-5 [Paracoccidioides brasiliensis Pb03]
Length = 283
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 156/209 (74%), Gaps = 1/209 (0%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
+ +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGA
Sbjct: 58 NPNCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEINSCLLGTMAGGA 117
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETG 163
ADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GMGLS+GTM AG + G
Sbjct: 118 ADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQEG 177
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
P LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA EL RR+I AT RDA
Sbjct: 178 PALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAATHRDA 237
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGELHY 252
SGG ++Y++ GW+K D + +
Sbjct: 238 YSGGFINLYHIKEAGWEKHGFSDTNPIFW 266
>gi|225192987|dbj|BAH29621.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193008|dbj|BAH29635.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 42 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 99
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 100 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 159
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 160 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 219
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 220 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 249
>gi|258574735|ref|XP_002541549.1| proteasome component PRE2 [Uncinocarpus reesii 1704]
gi|237901815|gb|EEP76216.1| proteasome component PRE2 [Uncinocarpus reesii 1704]
Length = 283
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/231 (53%), Positives = 161/231 (69%), Gaps = 5/231 (2%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P +S SF ++ D + +K A GTTTLAF FK G++VA DSRA+ G +I+
Sbjct: 40 PPISQPASFLRAMTDD----HANPNCPIKLAHGTTTLAFRFKGGIIVATDSRATAGNWIA 95
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ+VKK+IEIN +LGTMAGGAADCQ+W LG+ CRLHEL +KRRISV ASKLLAN++
Sbjct: 96 SQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMLCRLHELRHKRRISVAAASKLLANLV 155
Query: 143 YSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
Y+Y+GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D
Sbjct: 156 YNYKGMGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYD 215
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
++ EEA L RR+I A RDA SGG ++Y+V GW K D+ + +
Sbjct: 216 LTEEEALSLGRRSILAAMHRDAYSGGSVNLYHVKEEGWVKHGFSDMNPIFW 266
>gi|225193059|dbj|BAH29669.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 146/208 (70%), Gaps = 4/208 (1%)
Query: 31 FSLPLSTDFDEF----QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F +D + GTTTLAF F+ GV+VA DSRAS G Y++S V
Sbjct: 42 FAVPVGNEPSGFLRSCNRDEGVRIDLNHGTTTLAFKFRHGVIVAVDSRASAGNYLASNDV 101
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADCQ+W R L +CRL L N RISV ASKLL N++ YR
Sbjct: 102 NKVIEINPYLLGTMSGSAADCQYWERLLAKECRLFRLRNNHRISVAAASKLLCNMMLGYR 161
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++EE
Sbjct: 162 GMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEE 221
Query: 207 AAELARRAIYHATFRDAASGGVASVYYV 234
A EL R I HAT RDA SGG ++Y++
Sbjct: 222 AYELGCRGIAHATHRDAYSGGSVNMYHM 249
>gi|171687907|ref|XP_001908894.1| hypothetical protein [Podospora anserina S mat+]
gi|170943915|emb|CAP69567.1| unnamed protein product [Podospora anserina S mat+]
Length = 288
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 160/216 (74%), Gaps = 4/216 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 45 AQPSAWLRAATDD---RSNPHCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 101
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 102 KKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYK 161
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
G GLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D+++E
Sbjct: 162 GKGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTVE 221
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
EA EL R+I AT RDA SGG ++Y+V +GW+K
Sbjct: 222 EALELGSRSILAATHRDAYSGGFINLYHVKESGWEK 257
>gi|225193023|dbj|BAH29645.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193032|dbj|BAH29651.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193074|dbj|BAH29679.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
>gi|225192993|dbj|BAH29625.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
>gi|225193038|dbj|BAH29655.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
>gi|225193014|dbj|BAH29639.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
>gi|225192969|dbj|BAH29689.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192972|dbj|BAH29687.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192975|dbj|BAH29685.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192996|dbj|BAH29627.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193026|dbj|BAH29647.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193035|dbj|BAH29653.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193044|dbj|BAH29659.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193047|dbj|BAH29661.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193062|dbj|BAH29671.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
>gi|225192955|dbj|BAH29697.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
>gi|225192949|dbj|BAH29699.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 43 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 100
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV ASKLL N++
Sbjct: 101 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLG 160
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 161 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 220
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 221 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
>gi|225557527|gb|EEH05813.1| proteasome component PRE2 [Ajellomyces capsulatus G186AR]
Length = 283
Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 154/204 (75%), Gaps = 1/204 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+
Sbjct: 63 IKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEINSCLLGTMAGGAADCQY 122
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYY 168
W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GMGLS+GTM AG + GP LYY
Sbjct: 123 WLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQEGPALYY 182
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA EL R+I AT RDA SGG
Sbjct: 183 IDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDEEALELGSRSILAATHRDAYSGGY 242
Query: 229 ASVYYVGPNGWKKLSGDDVGELHY 252
++Y+V GWKK D + +
Sbjct: 243 INLYHVKEEGWKKHGFSDTNPIFW 266
>gi|213410533|ref|XP_002176036.1| proteasome subunit beta type-5 [Schizosaccharomyces japonicus
yFS275]
gi|212004083|gb|EEB09743.1| proteasome subunit beta type-5 [Schizosaccharomyces japonicus
yFS275]
Length = 274
Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 155/207 (74%), Gaps = 2/207 (0%)
Query: 44 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGG 103
K + + H GTTTLAF +K G++V DSRAS G ++SQ+VKK+IEINPY+LGTMAGG
Sbjct: 52 KHCRINMNH--GTTTLAFRYKHGIVVCVDSRASAGPLVASQTVKKVIEINPYLLGTMAGG 109
Query: 104 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 163
AADCQFW LG++CRLH+L N ISV+ ASK+L+ I+YSY+G GLS+GTM+AG + G
Sbjct: 110 AADCQFWETVLGMECRLHQLRNHELISVSSASKILSTIVYSYKGYGLSMGTMLAGTGKGG 169
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
L+Y+DS+G RL+G FSVGSGS +AYGVLD+GY++D+S EEA L +R+I AT RDA
Sbjct: 170 TALFYIDSDGTRLEGDLFSVGSGSTFAYGVLDAGYRWDLSKEEALYLGKRSILAATHRDA 229
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGEL 250
SGG ++Y++ GWK DV EL
Sbjct: 230 YSGGTINLYHIDEEGWKFHGNFDVDEL 256
>gi|339521933|gb|AEJ84131.1| proteasome subunit beta type-8 [Capra hircus]
Length = 276
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 160/233 (68%), Gaps = 6/233 (2%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP +F + ++ ++ A GTTTLAF F+ G +VA SRA G YI
Sbjct: 39 SPELALPRGMQPTDFFRSLGGNGESNVQIEMAHGTTTLAFKFQHGEIVAVGSRAPAGNYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+ V K+IEINP++ GTM+G AADCQ+W R L +CRLH L N R+SV+ ASKLL+++
Sbjct: 99 YTLKVNKVIEINPHLHGTMSGCAADCQYWERLLAKECRLHYLRNGERVSVSAASKLLSHM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YR MGLS+G+MI GWD+ GPGLYYVD G RL G+ FS GSG+ +AYGV+DSG + D
Sbjct: 159 MCQYRSMGLSMGSMICGWDQKGPGLYYVDHNGTRLSGSMFSTGSGNSHAYGVMDSGKRRD 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+SIEEA +L RRAI HAT RD+ SGGV ++Y++ + W K+ DV +L + Y
Sbjct: 219 LSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDDWVKVESTDVSDLMHQY 271
>gi|154274908|ref|XP_001538305.1| proteasome component PRE2 precursor [Ajellomyces capsulatus NAm1]
gi|150414745|gb|EDN10107.1| proteasome component PRE2 precursor [Ajellomyces capsulatus NAm1]
Length = 283
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 154/204 (75%), Gaps = 1/204 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+
Sbjct: 63 IKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEINSCLLGTMAGGAADCQY 122
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYY 168
W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GMGLS+GTM AG + GP LYY
Sbjct: 123 WLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQEGPALYY 182
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA EL R+I AT RDA SGG
Sbjct: 183 IDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDEEALELGSRSILAATHRDAYSGGY 242
Query: 229 ASVYYVGPNGWKKLSGDDVGELHY 252
++Y+V GWKK D + +
Sbjct: 243 INLYHVKEEGWKKHGFSDTNPIFW 266
>gi|367006907|ref|XP_003688184.1| hypothetical protein TPHA_0M01750 [Tetrapisispora phaffii CBS 4417]
gi|357526491|emb|CCE65750.1| hypothetical protein TPHA_0M01750 [Tetrapisispora phaffii CBS 4417]
Length = 286
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 124/227 (54%), Positives = 160/227 (70%), Gaps = 5/227 (2%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P +SA F L TD D D K + H GTTTLAF F+ G++VA DSRA+ G +++
Sbjct: 46 PPISAPRDF-LRAHTD-DATNPDCKIKIAH--GTTTLAFRFQGGIIVAVDSRATAGNWVA 101
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ+V K+I INP++LGTMAGGAADCQ+W LG +CRLHEL K RISV ASK+L+N++
Sbjct: 102 SQTVNKVIRINPFLLGTMAGGAADCQYWETWLGSQCRLHELKEKERISVAAASKILSNLV 161
Query: 143 YSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLDS YK+D
Sbjct: 162 YQYKGAGLSMGTMICGYTKKEGPTVYYVDSDGTRLKGNVFCVGSGQTFAYGVLDSNYKWD 221
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVG 248
++++EA L +R+I A RDA SGG ++Y+V NGW DVG
Sbjct: 222 LTVDEALYLGKRSILAAAHRDAYSGGSINLYHVTENGWVYHGNHDVG 268
>gi|240278169|gb|EER41676.1| proteasome component PRE2 [Ajellomyces capsulatus H143]
gi|325096234|gb|EGC49544.1| proteasome component [Ajellomyces capsulatus H88]
Length = 283
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 154/204 (75%), Gaps = 1/204 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK+IEIN +LGTMAGGAADCQ+
Sbjct: 63 IKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEINSCLLGTMAGGAADCQY 122
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYY 168
W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GMGLS+GTM AG + GP LYY
Sbjct: 123 WLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQEGPALYY 182
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA EL R+I AT RDA SGG
Sbjct: 183 IDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDEEALELGSRSILAATHRDAYSGGY 242
Query: 229 ASVYYVGPNGWKKLSGDDVGELHY 252
++Y+V GWKK D + +
Sbjct: 243 INLYHVKEEGWKKHGFSDTNPIFW 266
>gi|401881406|gb|EJT45706.1| proteasome component [Trichosporon asahii var. asahii CBS 2479]
Length = 275
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/231 (54%), Positives = 159/231 (68%), Gaps = 13/231 (5%)
Query: 24 ELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
E+ P LS D + A +K A GTTTLAF FK G++VA DSRA+ G YI+S
Sbjct: 34 EVPGVPDPLAFLSLHTDSMSTNPAAKIKLAHGTTTLAFRFKGGIIVAVDSRATAGSYIAS 93
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
+VKK+IEINPY+LGTMAGGAADCQ+W LG++CRLHEL NK RISV ASK+L+NI+Y
Sbjct: 94 GTVKKVIEINPYLLGTMAGGAADCQYWETYLGMQCRLHELRNKERISVAAASKILSNIVY 153
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
Y+GMGLS+ GP L+YVDS+G RLKG FSVGSGS YAYGVLD ++++S
Sbjct: 154 QYKGMGLSM----------GPALFYVDSDGQRLKGDLFSVGSGSTYAYGVLD---QWNLS 200
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
E+A EL RR+I A RDA SG ++Y+V NGW+ + D+ EL Y Y
Sbjct: 201 DEDAQELGRRSICAAGHRDAYSGNTINLYHVRENGWEFIDNYDLSELWYKY 251
>gi|310790979|gb|EFQ26512.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 286
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/227 (55%), Positives = 163/227 (71%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD D D +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 46 AHPSSWLRAATD-DRSNPD--CPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 102
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 103 KKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYK 162
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLD+ Y++D++ +
Sbjct: 163 GMGLSMGTMCAGVTKEEGPALYYVDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTDQ 222
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA +L R+I AT RDA SGG ++Y+V GW K +D + +
Sbjct: 223 EALDLGSRSILAATHRDAFSGGFINLYHVKEEGWVKHGFNDTNPIFW 269
>gi|225193041|dbj|BAH29657.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 142/192 (73%), Gaps = 2/192 (1%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S V K+IEINPY+LGTM+G
Sbjct: 61 EEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPYLLGTMSG 118
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AADCQ+W R L +CRL+ L N RISV ASKLL N++ YRGMGLSVG+MI GWD+
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKE 178
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++EEA EL R I HAT RD
Sbjct: 179 GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRD 238
Query: 223 AASGGVASVYYV 234
A SGG ++Y++
Sbjct: 239 AYSGGSVNMYHM 250
>gi|390461498|ref|XP_002746454.2| PREDICTED: proteasome subunit beta type-8 [Callithrix jacchus]
Length = 401
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 150/209 (71%), Gaps = 6/209 (2%)
Query: 28 APSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF ++ ++ A GTTTLAF F+ GV+ A DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLCGDEERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 159 MCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 218
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVAS 230
+S EEA +LARRAI HAT RD+ SGGV +
Sbjct: 219 LSPEEAYDLARRAIAHATHRDSYSGGVVN 247
>gi|402078002|gb|EJT73351.1| proteasome component PRE2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 284
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/227 (54%), Positives = 161/227 (70%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 44 AHPSAWLRAATDD---HANPHCPIKIAHGTTTLAFRFRGGIIVATDSRATAGNWIASQTV 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 101 KKVIEINSCLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYK 160
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y +++S E
Sbjct: 161 GMGLSMGTMCAGVTKEEGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYNYELSDE 220
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+A EL RR+I AT RDA SGG ++Y+V GW + +D + +
Sbjct: 221 DALELGRRSILAATHRDAYSGGFINLYHVKEEGWVRHGFNDTNPIFW 267
>gi|380492983|emb|CCF34208.1| proteasome component PRE2 [Colletotrichum higginsianum]
Length = 286
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/227 (55%), Positives = 163/227 (71%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD D D +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 46 AHPSSWLRAATD-DRSNPD--CPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 102
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 103 KKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYK 162
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLD+ Y++D++ +
Sbjct: 163 GMGLSMGTMCAGVTKEEGPALYYVDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTDQ 222
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA +L R+I AT RDA SGG ++Y+V GW K +D + +
Sbjct: 223 EALDLGSRSILAATHRDAYSGGFINLYHVKEEGWVKHGFNDTNPIFW 269
>gi|225193068|dbj|BAH29675.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 142/192 (73%), Gaps = 2/192 (1%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S V K+IEINPY+LGTM+G
Sbjct: 61 EEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPYLLGTMSG 118
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AADCQ+W R L +CRL+ L N RISV ASKLL N++ YRGMGLSVG+MI GWD+
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKE 178
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++EEA EL R I HAT RD
Sbjct: 179 GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRD 238
Query: 223 AASGGVASVYYV 234
A SGG ++Y++
Sbjct: 239 AYSGGSVNMYHM 250
>gi|156062346|ref|XP_001597095.1| hypothetical protein SS1G_01289 [Sclerotinia sclerotiorum 1980]
gi|154696625|gb|EDN96363.1| hypothetical protein SS1G_01289 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 282
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 161/227 (70%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 42 AHPSAWLRAATDD---HANPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 98
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 99 KKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYRYK 158
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y +D+S E
Sbjct: 159 GMGLSMGTMCAGVTKEEGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYSYDLSEE 218
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
A EL +R+I AT RDA SGG ++Y+V +GW K +D + +
Sbjct: 219 AALELGKRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIFW 265
>gi|225192999|dbj|BAH29629.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193011|dbj|BAH29637.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 148/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 42 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 99
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
V K+IEINPY+LGTM+G AADCQ+W R L +CRL L N RISV ASKLL N++
Sbjct: 100 DVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLFRLRNNHRISVAAASKLLCNMMLG 159
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 160 YRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 219
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 220 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 249
>gi|367020222|ref|XP_003659396.1| hypothetical protein MYCTH_2296370 [Myceliophthora thermophila ATCC
42464]
gi|347006663|gb|AEO54151.1| hypothetical protein MYCTH_2296370 [Myceliophthora thermophila ATCC
42464]
Length = 283
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 159/216 (73%), Gaps = 4/216 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 42 AHPSAWLRAVTDD---RSNPSCPIKIAHGTTTLAFRFQGGIIVATDSRATAGSWIASQTV 98
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 99 KKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYK 158
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ E
Sbjct: 159 GMGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGDLFCVGSGQTFAYGVLDAEYRWDLTTE 218
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
EA EL R+I AT RDA SGG ++Y+V +GW+K
Sbjct: 219 EALELGSRSILAATHRDAYSGGFINLYHVKESGWEK 254
>gi|198456605|ref|XP_001360388.2| GA22086 [Drosophila pseudoobscura pseudoobscura]
gi|198135674|gb|EAL24963.2| GA22086 [Drosophila pseudoobscura pseudoobscura]
Length = 321
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 164/246 (66%), Gaps = 7/246 (2%)
Query: 9 ESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVM 68
E+TS F P AP F P+ + + + A GTTTL F ++ GV+
Sbjct: 32 EATSNFEN------PYALMAPPFEDPVE-NLPKILAHCGVKMDFAHGTTTLGFRYQGGVV 84
Query: 69 VAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRR 128
+ ADSRA+ G YI SQ++KKI+E+N YMLGT+AGGAADC +W R L RLHEL KRR
Sbjct: 85 LCADSRATSGQYIGSQTMKKIVELNDYMLGTLAGGAADCVYWDRVLARDSRLHELRFKRR 144
Query: 129 ISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSP 188
+SV A++++ NI Y+GMGL +G M+AG+D+ GP L YVDSEG R G F+VGSGSP
Sbjct: 145 LSVDAAARMIVNISAEYKGMGLVMGMMLAGYDDEGPKLIYVDSEGMRCHGNVFAVGSGSP 204
Query: 189 YAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVG 248
YA GVLD+G++F M+ +EA +LARRAIYHAT +DA SGG+ +Y++ GW+ +S D
Sbjct: 205 YALGVLDTGHRFTMTDQEAFDLARRAIYHATSKDAYSGGIVRLYHINEKGWRNVSNTDCS 264
Query: 249 ELHYHY 254
EL+ Y
Sbjct: 265 ELYNVY 270
>gi|225192943|dbj|BAH29703.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 148/208 (71%), Gaps = 4/208 (1%)
Query: 31 FSLPLSTDFDEF----QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P+ + F +D + GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 40 FAVPVGNEPSGFLRSCNRDEGVRIDLNHGTTTLAFKFRHGVIVAVDSRASAGNYLASNDA 99
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL N++ YR
Sbjct: 100 NKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNMMLGYR 159
Query: 147 GMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 206
GMGLS+G+MI GWD+ GPGLYYVD+ G RL G FS G G+ YAYGV+DSGYK DM++EE
Sbjct: 160 GMGLSMGSMICGWDKEGPGLYYVDNNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEE 219
Query: 207 AAELARRAIYHATFRDAASGGVASVYYV 234
A EL R I HAT RDA SGG ++Y++
Sbjct: 220 AYELGCRGIAHATHRDAYSGGSVNMYHM 247
>gi|237842737|ref|XP_002370666.1| proteasome subunit beta type 5, putative [Toxoplasma gondii ME49]
gi|211968330|gb|EEB03526.1| proteasome subunit beta type 5, putative [Toxoplasma gondii ME49]
gi|221485637|gb|EEE23918.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221502989|gb|EEE28699.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 309
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 148/204 (72%), Gaps = 3/204 (1%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTTL F+FK G+++A DSRASMG YISSQSV K+IEI+ +LGTMAGGAADC +W R+
Sbjct: 95 KGTTTLGFVFKGGIILAVDSRASMGTYISSQSVVKVIEISDIILGTMAGGAADCSYWERH 154
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG--PGLYYVDS 171
+ + C+L +L N I V AS +LANI + +RG GL GTMIAGW+E P LY+VD
Sbjct: 155 MWLLCKLFKLRNGEPIPVAAASNMLANIFFHWRGYGLCCGTMIAGWNEKDEKPELYFVDD 214
Query: 172 EGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
+ RLKG FS GSGS YAYGVLD+ YK+DM+ EEA EL +RAIY A RD SGGV V
Sbjct: 215 KATRLKGDLFSCGSGSTYAYGVLDNEYKWDMTDEEAVELGKRAIYQAAHRDGGSGGVVRV 274
Query: 232 YYVGPNGWKK-LSGDDVGELHYHY 254
+++ GWKK + G DV ELHY Y
Sbjct: 275 FHIHRGGWKKVIPGMDVSELHYEY 298
>gi|50546901|ref|XP_500920.1| YALI0B15224p [Yarrowia lipolytica]
gi|49646786|emb|CAG83171.1| YALI0B15224p [Yarrowia lipolytica CLIB122]
Length = 286
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 162/226 (71%), Gaps = 10/226 (4%)
Query: 20 ELCPELSAAPSFSLPLS-----TDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
+L P L A P S P + TD D D K + H GTTTLAF FK G++VA DSR
Sbjct: 32 QLTPSL-AVPPISQPTAFLRAHTD-DASNPDCKIKIAH--GTTTLAFRFKGGIVVAVDSR 87
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G +++SQ+V K+I INP++LGTMAGGAADCQ+W LG +CRL+EL K+RISV A
Sbjct: 88 ATAGNWVASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGGQCRLYELREKQRISVAAA 147
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGV 193
SK+L+N++YSY+GMGLS+GTM+ G+ GP +YYVDS+G RLKG F VGSG +AYGV
Sbjct: 148 SKILSNLVYSYKGMGLSMGTMVCGYTAREGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGV 207
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
LD+ YK+D+++EEA L +R+I AT RDA SGG ++Y+V GW
Sbjct: 208 LDATYKWDLTVEEALALGKRSILAATHRDAFSGGSVNLYHVTEEGW 253
>gi|11514002|pdb|1G0U|K Chain K, A Gated Channel Into The Proteasome Core Particle
gi|11514016|pdb|1G0U|Y Chain Y, A Gated Channel Into The Proteasome Core Particle
gi|20150387|pdb|1JD2|K Chain K, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150394|pdb|1JD2|R Chain R, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279378|pdb|2F16|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279392|pdb|2F16|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032212|pdb|2FAK|K Chain K, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032226|pdb|2FAK|Y Chain Y, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490853|pdb|2GPL|K Chain K, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490867|pdb|2GPL|Y Chain Y, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|178847470|pdb|2ZCY|K Chain K, Yeast 20s Proteasome:syringolin A-Complex
gi|178847484|pdb|2ZCY|Y Chain Y, Yeast 20s Proteasome:syringolin A-Complex
gi|178847512|pdb|3BDM|K Chain K, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847526|pdb|3BDM|Y Chain Y, Yeast 20s Proteasome:glidobactin A-Complex
gi|190016377|pdb|3D29|K Chain K, Proteasome Inhibition By Fellutamide B
gi|190016391|pdb|3D29|Y Chain Y, Proteasome Inhibition By Fellutamide B
gi|197725331|pdb|3E47|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725345|pdb|3E47|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939222|pdb|3DY3|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939236|pdb|3DY3|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939250|pdb|3DY4|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939264|pdb|3DY4|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828247|pdb|3GPJ|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828261|pdb|3GPJ|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588331|pdb|3GPT|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588345|pdb|3GPT|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588359|pdb|3GPW|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588373|pdb|3GPW|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588553|pdb|3HYE|K Chain K, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588567|pdb|3HYE|Y Chain Y, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|330689391|pdb|3MG4|K Chain K, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689405|pdb|3MG4|Y Chain Y, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361154|pdb|3MG0|K Chain K, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361168|pdb|3MG0|Y Chain Y, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361182|pdb|3MG6|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361196|pdb|3MG6|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361210|pdb|3MG7|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361224|pdb|3MG7|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361238|pdb|3MG8|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361252|pdb|3MG8|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|335892351|pdb|3OKJ|K Chain K, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892365|pdb|3OKJ|Y Chain Y, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780429|pdb|3OEU|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780443|pdb|3OEU|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780457|pdb|3OEV|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780471|pdb|3OEV|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610682|pdb|3TDD|K Chain K, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610696|pdb|3TDD|Y Chain Y, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545856|pdb|3SHJ|K Chain K, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545870|pdb|3SHJ|Y Chain Y, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|374977460|pdb|1G65|K Chain K, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|374977461|pdb|1G65|Y Chain Y, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|378792251|pdb|3UN4|K Chain K, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792265|pdb|3UN4|Y Chain Y, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792285|pdb|3UN8|K Chain K, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792299|pdb|3UN8|Y Chain Y, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980826|pdb|3SDI|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980840|pdb|3SDI|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980854|pdb|3SDK|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980868|pdb|3SDK|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550742|pdb|4GK7|K Chain K, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550756|pdb|4GK7|Y Chain Y, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072202|pdb|4G4S|L Chain L, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973870|pdb|4FZC|K Chain K, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973884|pdb|4FZC|Y Chain Y, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973898|pdb|4FZG|K Chain K, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973912|pdb|4FZG|Y Chain Y, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302349|pdb|4INR|K Chain K, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302363|pdb|4INR|Y Chain Y, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302377|pdb|4INT|K Chain K, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302391|pdb|4INT|Y Chain Y, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302405|pdb|4INU|K Chain K, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302419|pdb|4INU|Y Chain Y, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 212
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 151/198 (76%), Gaps = 1/198 (0%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTTLAF F+ G++VA DSRA+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG
Sbjct: 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLG 60
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGG 174
+CRLHEL K RISV ASK+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G
Sbjct: 61 SQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGT 120
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
RLKG F VGSG +AYGVLDS YK+D+S+E+A L +R+I A RDA SGG ++Y+V
Sbjct: 121 RLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHV 180
Query: 235 GPNGWKKLSGDDVGELHY 252
+GW DVGEL +
Sbjct: 181 TEDGWIYHGNHDVGELFW 198
>gi|296803825|ref|XP_002842765.1| proteasome component PRE2 [Arthroderma otae CBS 113480]
gi|238846115|gb|EEQ35777.1| proteasome component PRE2 [Arthroderma otae CBS 113480]
Length = 283
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 160/226 (70%), Gaps = 4/226 (1%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
PS L +TD D D L H GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK
Sbjct: 44 PSAFLRATTD-DHSNPDCPIKLAH--GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKK 100
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GM
Sbjct: 101 VIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGM 160
Query: 149 GLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
GLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA
Sbjct: 161 GLSMGTMCAGVTPEEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEA 220
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
L R+I AT RDA SGG ++Y+V GW K D + ++
Sbjct: 221 LALGSRSILAATHRDAYSGGFINLYHVKEEGWVKHGFSDTNPIFWN 266
>gi|320590110|gb|EFX02555.1| proteasome component [Grosmannia clavigera kw1407]
Length = 284
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 162/227 (71%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 44 AQPSAWLRAATDD---RSNPTCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 100
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG +CRLHEL +KRRISV ASK+LAN++YSY+
Sbjct: 101 KKVIEINSCLLGTMAGGAADCQYWLAWLGRECRLHELRHKRRISVAAASKILANLVYSYK 160
Query: 147 GMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y +D++ +
Sbjct: 161 GMGLSMGTMCAGVTPEEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYSYDLAAD 220
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+A EL RR+I AT RDA SGG ++Y+V +GW K D + +
Sbjct: 221 DALELGRRSILAATHRDAFSGGFINLYHVKEDGWVKHGFSDTNPIFW 267
>gi|116180334|ref|XP_001220016.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185092|gb|EAQ92560.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 283
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 158/216 (73%), Gaps = 4/216 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD + + +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 42 AHPSAWLRAATDD---RSNPSCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTV 98
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 99 KKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYK 158
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E G LYY+DS+G RL G F VGSG +AYGVLDS Y++D++ E
Sbjct: 159 GMGLSMGTMCAGVTKEEGAALYYIDSDGTRLAGDLFCVGSGQTFAYGVLDSEYRWDLTTE 218
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
EA EL R+I AT RDA SGG ++Y+V GW+K
Sbjct: 219 EALELGSRSILAATHRDAYSGGFINLYHVKETGWEK 254
>gi|302503731|ref|XP_003013825.1| proteasome component Pre3, putative [Arthroderma benhamiae CBS
112371]
gi|291177391|gb|EFE33185.1| proteasome component Pre3, putative [Arthroderma benhamiae CBS
112371]
gi|326474427|gb|EGD98436.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
gi|326481493|gb|EGE05503.1| proteasome component PRE2 [Trichophyton equinum CBS 127.97]
Length = 283
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 162/226 (71%), Gaps = 4/226 (1%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
PS L +TD D D +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK
Sbjct: 44 PSAFLRATTD-DHANPD--CPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKK 100
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GM
Sbjct: 101 VIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGM 160
Query: 149 GLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
GLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA
Sbjct: 161 GLSMGTMCAGVTPEEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEA 220
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
L R+I AT RDA SGG ++Y+V +GW K D + ++
Sbjct: 221 LALGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIFWN 266
>gi|327302090|ref|XP_003235737.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326461079|gb|EGD86532.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 283
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 162/226 (71%), Gaps = 4/226 (1%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
PS L +TD D D +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK
Sbjct: 44 PSAFLRATTD-DHANPD--CPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKK 100
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GM
Sbjct: 101 VIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGM 160
Query: 149 GLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
GLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA
Sbjct: 161 GLSMGTMCAGVTPEEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEA 220
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
L R+I AT RDA SGG ++Y+V +GW K D + ++
Sbjct: 221 LALGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIFWN 266
>gi|315039657|ref|XP_003169204.1| proteasome component PRE2 [Arthroderma gypseum CBS 118893]
gi|311337625|gb|EFQ96827.1| proteasome component PRE2 [Arthroderma gypseum CBS 118893]
Length = 283
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 162/226 (71%), Gaps = 4/226 (1%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
PS L +TD D D +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK
Sbjct: 44 PSAFLRATTD-DHANPD--CPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKK 100
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GM
Sbjct: 101 VIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGM 160
Query: 149 GLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
GLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA
Sbjct: 161 GLSMGTMCAGVTPEEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEA 220
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
L R+I AT RDA SGG ++Y+V +GW K D + ++
Sbjct: 221 LALGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIFWN 266
>gi|296411495|ref|XP_002835466.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629250|emb|CAZ79623.1| unnamed protein product [Tuber melanosporum]
Length = 282
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/248 (54%), Positives = 168/248 (67%), Gaps = 18/248 (7%)
Query: 11 TSPF---FGSGDELCPELSAA-PS----FSLP--------LSTDFDEFQKDTKATLKHAK 54
TSP F DE P+L+ PS FSLP L D++ + +K A
Sbjct: 9 TSPHDDEFYPEDEEVPKLTTTKPSLKHNFSLPPIAQPTGFLRALTDDYS-NPDCPIKLAH 67
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ G++VA DSRA+ G +ISSQ+VKK+IEIN MLGTMAGGAADCQ+W L
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATQGSWISSQTVKKVIEINDKMLGTMAGGAADCQYWLGYL 127
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE-TGPGLYYVDSEG 173
G++CRLHEL +KRRISV ASK+L+N++Y+Y+GMGLS+GTMIAG GP LYY+DS+G
Sbjct: 128 GVECRLHELRHKRRISVAAASKILSNLVYTYKGMGLSMGTMIAGVTALEGPALYYIDSDG 187
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
RL G F VGSG +AYGVLD Y +D+S EEA L R+I AT RDA SGG ++Y+
Sbjct: 188 TRLAGNLFCVGSGQTFAYGVLDREYDYDLSTEEALALGSRSILAATHRDAYSGGSINLYH 247
Query: 234 VGPNGWKK 241
V GW +
Sbjct: 248 VKEEGWTR 255
>gi|398396578|ref|XP_003851747.1| proteasome core particle subunit beta 5 [Zymoseptoria tritici
IPO323]
gi|339471627|gb|EGP86723.1| hypothetical protein MYCGRDRAFT_109970 [Zymoseptoria tritici
IPO323]
Length = 281
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/231 (52%), Positives = 163/231 (70%), Gaps = 5/231 (2%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P ++++ S+ ++ D + +K A GTTTLAF FK G++VA DSRA+ G +I+
Sbjct: 38 PPIASSQSWLRAMTDD----ASNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIA 93
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ+VKK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++
Sbjct: 94 SQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLV 153
Query: 143 YSYRGMGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
YSY+GMGLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYGVLD+ Y +D
Sbjct: 154 YSYKGMGLSMGTMCAGVTPSEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYSYD 213
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+ + A EL RR+I AT RDA SGG ++Y+V +GW K D + +
Sbjct: 214 LEDDAALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIFW 264
>gi|18447060|gb|AAL68121.1| AT21741p [Drosophila melanogaster]
Length = 315
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 159/227 (70%), Gaps = 1/227 (0%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
AP F P + + + + GTTTL F ++ GV++ ADSRA+ G YI SQ+++
Sbjct: 45 APPFERP-AENLPKILSHCGIRMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMR 103
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
KI+E+N YMLGT+AGGAADC +W R L +CRLH+L ++R++V A++++ NI Y+G
Sbjct: 104 KIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYKG 163
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGL +G M+AG+D+ GP L YVDSEG R G FSVGSGSPYA GVLD+GY++D+S +EA
Sbjct: 164 MGLVMGMMLAGFDDEGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEA 223
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+LARRAIYHAT +DA SGG+ +Y++ GW+ + D +LH Y
Sbjct: 224 YDLARRAIYHATSKDAYSGGIVRLYHIHSEGWRNICNTDCSDLHDSY 270
>gi|3114280|pdb|1RYP|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114294|pdb|1RYP|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|14488816|pdb|1FNT|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488830|pdb|1FNT|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765710|pdb|1Z7Q|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765724|pdb|1Z7Q|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|298508233|pdb|1VSY|L Chain L, Proteasome Activator Complex
gi|298508247|pdb|1VSY|Z Chain Z, Proteasome Activator Complex
gi|298508449|pdb|3L5Q|P Chain P, Proteasome Activator Complex
gi|298508463|pdb|3L5Q|2 Chain 2, Proteasome Activator Complex
Length = 212
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/198 (58%), Positives = 151/198 (76%), Gaps = 1/198 (0%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTTLAF F+ G++VA DSRA+ G +++SQ+VK++IEINP++LGTMAGGAADCQFW LG
Sbjct: 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPFLLGTMAGGAADCQFWETWLG 60
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGG 174
+CRLHEL K RISV ASK+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G
Sbjct: 61 SQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGT 120
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
RLKG F VGSG +AYGVLDS YK+D+S+E+A L +R+I A RDA SGG ++Y+V
Sbjct: 121 RLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHV 180
Query: 235 GPNGWKKLSGDDVGELHY 252
+GW DVGEL +
Sbjct: 181 TEDGWIYHGNHDVGELFW 198
>gi|20130281|ref|NP_611776.1| proteasome beta5R subunit [Drosophila melanogaster]
gi|7291554|gb|AAF46978.1| proteasome beta5R subunit [Drosophila melanogaster]
gi|201066095|gb|ACH92457.1| FI08137p [Drosophila melanogaster]
Length = 315
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 159/227 (70%), Gaps = 1/227 (0%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
AP F P + + + + GTTTL F ++ GV++ ADSRA+ G YI SQ+++
Sbjct: 45 APPFERP-AENLPKILSHCGIRMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMR 103
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
KI+E+N YMLGT+AGGAADC +W R L +CRLH+L ++R++V A++++ NI Y+G
Sbjct: 104 KIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYKG 163
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGL +G M+AG+D+ GP L YVDSEG R G FSVGSGSPYA GVLD+GY++D+S +EA
Sbjct: 164 MGLVMGMMLAGFDDEGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEA 223
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+LARRAIYHAT +DA SGG+ +Y++ GW+ + D +LH Y
Sbjct: 224 YDLARRAIYHATSKDAYSGGIVRLYHIHSEGWRNICNTDCSDLHDSY 270
>gi|325192589|emb|CCA27017.1| proteasome subunit beta type5 putative [Albugo laibachii Nc14]
Length = 294
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 158/216 (73%), Gaps = 4/216 (1%)
Query: 42 FQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMA 101
+ +D TLK KGTTTLAFI++ G++VA DSR++MG +I+SQ VKKI EIN Y+L T+A
Sbjct: 74 YDEDNSQTLKFEKGTTTLAFIYQNGIIVAVDSRSTMGPFIASQKVKKINEINEYILATIA 133
Query: 102 GGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 161
GGAADCQFW RNL ++CR+ EL N+ RISV ASKL+AN Y+ G+S+G M+ G+D
Sbjct: 134 GGAADCQFWQRNLSVQCRMFELRNRHRISVRAASKLIANTCNYYKQYGMSLGMMMMGYDN 193
Query: 162 TGPGLYYVDSEGGRLKGT----RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYH 217
P LYYVD EG R++ + RFSVGSGS YAYG+LDS +++D++ EEA L R+AIYH
Sbjct: 194 GKPTLYYVDDEGSRMRASDKTPRFSVGSGSTYAYGILDSNWRWDLTDEEAIALGRKAIYH 253
Query: 218 ATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
AT RDA SGG+ +VY +G++ + DV E+H H
Sbjct: 254 ATHRDAYSGGICNVYMFKEDGYRHVVSQDVDEMHDH 289
>gi|302660177|ref|XP_003021770.1| proteasome component Pre3, putative [Trichophyton verrucosum HKI
0517]
gi|291185685|gb|EFE41152.1| proteasome component Pre3, putative [Trichophyton verrucosum HKI
0517]
Length = 281
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 161/226 (71%), Gaps = 6/226 (2%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
PS L +TD D D K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK
Sbjct: 44 PSAFLRATTD-DHANPDCKI----AHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKK 98
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y+Y+GM
Sbjct: 99 VIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGM 158
Query: 149 GLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
GLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA
Sbjct: 159 GLSMGTMCAGVTPEEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEA 218
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
L R+I AT RDA SGG ++Y+V +GW K D + ++
Sbjct: 219 LALGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIFWN 264
>gi|225192946|dbj|BAH29701.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 142/192 (73%), Gaps = 2/192 (1%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S K+IEINPY+LGTM+G
Sbjct: 58 EEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPYLLGTMSG 115
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AADCQ+W R L +CRL++L N RISV ASKLL N++ YRGMGLSVG+MI GWD+
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKE 175
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++EEA EL R I HAT RD
Sbjct: 176 GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRD 235
Query: 223 AASGGVASVYYV 234
A SGG ++Y++
Sbjct: 236 AYSGGSVNMYHM 247
>gi|48431271|gb|AAT44125.1| 20S proteasome beta subunit E [Saussurea medusa]
Length = 150
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/146 (80%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Query: 1 MKLDTSGLESTSPFFGSGDELCPE-LSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTL 59
MKLD GLES++P +G D++ + S APSF LP+++DFD FQK + +K AKGTTTL
Sbjct: 1 MKLDFGGLESSAPLYGGNDDVLSDGFSTAPSFDLPVTSDFDGFQKSSIQMVKPAKGTTTL 60
Query: 60 AFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR 119
AFIFKEGVMVAA+SRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR
Sbjct: 61 AFIFKEGVMVAANSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR 120
Query: 120 LHELANKRRISVTGASKLLANILYSY 145
LHELANKRRISVTGASKLLANILYSY
Sbjct: 121 LHELANKRRISVTGASKLLANILYSY 146
>gi|225193065|dbj|BAH29673.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 40 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 97
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL N++
Sbjct: 98 DANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNMMLG 157
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 158 YRGMGLSMGSMICGWDKEGPGLYYVDHNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 217
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 218 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 247
>gi|225192964|dbj|BAH29691.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 40 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 97
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL N++
Sbjct: 98 DANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNMMLG 157
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 158 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 217
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 218 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 247
>gi|225192978|dbj|BAH29683.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193050|dbj|BAH29663.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 149/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 40 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 97
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL N++
Sbjct: 98 DANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNMMLG 157
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK DM++
Sbjct: 158 YRGMGLSMGSMICGWDKEGPGLYYVDHNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTV 217
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 218 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 247
>gi|401412600|ref|XP_003885747.1| Family T1, proteasome beta subunit, threonine peptidase, related
[Neospora caninum Liverpool]
gi|325120167|emb|CBZ55721.1| Family T1, proteasome beta subunit, threonine peptidase, related
[Neospora caninum Liverpool]
Length = 310
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 147/204 (72%), Gaps = 3/204 (1%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTTL F+FK G+++A DSRASMG YISSQSV K+IEI+ +LGTMAGGAADC +W R+
Sbjct: 96 KGTTTLGFVFKGGIILAVDSRASMGTYISSQSVVKVIEISDIILGTMAGGAADCSYWERH 155
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET--GPGLYYVDS 171
+ + C+L +L N I V AS +LANI + +RG GL GTMIAGW+E P LY+VD
Sbjct: 156 MWLLCKLFKLRNGEPIPVAAASNMLANIFFHWRGYGLCCGTMIAGWNEKEEKPELYFVDD 215
Query: 172 EGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
+ RLKG FS GSGS YAYGVLD+ YK+DM+ EEA EL +RAIY A RD SGGV V
Sbjct: 216 KATRLKGDLFSCGSGSTYAYGVLDNEYKWDMTDEEAVELGKRAIYQAAHRDGGSGGVVRV 275
Query: 232 YYVGPNGWKK-LSGDDVGELHYHY 254
+++ GW K + G DV ELHY Y
Sbjct: 276 FHIHRGGWTKVIPGMDVSELHYEY 299
>gi|194885021|ref|XP_001976373.1| GG20051 [Drosophila erecta]
gi|190659560|gb|EDV56773.1| GG20051 [Drosophila erecta]
Length = 390
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 158/227 (69%), Gaps = 1/227 (0%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
AP F P + + + + GTTTL F ++ GV++ ADSRA+ G YI SQ+++
Sbjct: 45 APPFERP-AENLPKILAHCGIRMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMR 103
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
KI+E+N YMLGT+AGGAADC +W R L +CRLH+L ++R++V A++++ NI Y+G
Sbjct: 104 KIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYKG 163
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGL +G M+AG+D+ GP L YVDSEG R G FSVGSGSPYA GVLD+GY+ D+S +EA
Sbjct: 164 MGLVMGMMLAGFDDEGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRHDLSDQEA 223
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+LARRAIYHAT +DA SGG+ +Y++ GW+ + D +LH Y
Sbjct: 224 YDLARRAIYHATSKDAYSGGIVRLYHINSEGWRNICNTDCSDLHDSY 270
>gi|197129150|gb|ACH45648.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 279
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L+ GTTTLAF GV VA DSRA+ G YI+SQSV+K++ I+ MLGTMAGGAADC F
Sbjct: 71 LQILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIDGRMLGTMAGGAADCAF 130
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R + +CR+ EL NK +SV ASKLLAN++Y Y+G+GLS+GTM+ GWD+ GPGLYYV
Sbjct: 131 WQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYV 190
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGY-KFDMSIEEAAELARRAIYHATFRDAASGGV 228
DSEG R+ G F+VGSGS YAYGVLD G S E A ELARRAI A RDA SGG
Sbjct: 191 DSEGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGGC 250
Query: 229 ASVYYVGPNGWKKLSGDDVGELHYHY 254
V +VGP GWK++S DD+ EL Y
Sbjct: 251 VRVMHVGPEGWKEVSHDDIAELQDKY 276
>gi|19173511|ref|NP_597314.1| 20S PROTEASOME BETA-TYPE SUBUNIT COMPONENT PRE2 [Encephalitozoon
cuniculi GB-M1]
gi|19171100|emb|CAD26490.1| 20S PROTEASOME BETA-TYPE SUBUNIT COMPONENT PRE2 [Encephalitozoon
cuniculi GB-M1]
gi|449328847|gb|AGE95123.1| 20S proteasome beta-type subunit component PRE2 [Encephalitozoon
cuniculi]
Length = 229
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 150/208 (72%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
Q+ ++ +K GTTTLAFIFKEG+++A DSRA+ G YI+SQ+V K+I IN +LGTMAG
Sbjct: 19 QETIRSLIKPYHGTTTLAFIFKEGMVIAVDSRATSGSYIASQTVNKVININKNLLGTMAG 78
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
GAADC FW +G+ + +EL N RRI+V AS L+N +Y Y+G GLS+GTMI G+D +
Sbjct: 79 GAADCLFWENLMGLYAKNYELTNGRRITVAAASMYLSNCVYRYKGYGLSMGTMICGYDSS 138
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GP +YYVD +G R+ G+ FSVGSGS AYG+L S Y+FDM +EA L R AI+HA RD
Sbjct: 139 GPSIYYVDDDGKRVSGSLFSVGSGSTIAYGILSSSYRFDMDKDEALNLGRDAIFHAAHRD 198
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGEL 250
A SGG+ ++YY+ +GW K+ DV E
Sbjct: 199 AFSGGLINLYYMNEDGWTKVGSYDVNEF 226
>gi|195489076|ref|XP_002092584.1| GE11586 [Drosophila yakuba]
gi|194178685|gb|EDW92296.1| GE11586 [Drosophila yakuba]
Length = 315
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/227 (49%), Positives = 158/227 (69%), Gaps = 1/227 (0%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
AP F P + + + + GTTTL F ++ GV++ ADSRA+ G YI SQ+++
Sbjct: 45 APPFERP-TENLPKILAQCGIRMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMR 103
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
KI+E+N YMLGT+AGGAADC +W R L +CRLH+L ++R++V A++++ NI Y+G
Sbjct: 104 KIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYKG 163
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGL +G M+AG+D+ GP L YVDS+G R G FSVGSGSPYA GVLD+GY+ D+S +EA
Sbjct: 164 MGLVMGMMLAGFDDEGPKLIYVDSDGMRSHGLVFSVGSGSPYALGVLDTGYRHDLSDQEA 223
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+LARRAIYHAT +DA SGG+ +Y++ GW+ + D +LH Y
Sbjct: 224 YDLARRAIYHATSKDAYSGGIVRLYHINSEGWRNICNTDCSDLHDSY 270
>gi|70923607|ref|XP_734786.1| 20S proteasome beta subunit [Plasmodium chabaudi chabaudi]
gi|56507845|emb|CAH78065.1| 20S proteasome beta subunit, putative [Plasmodium chabaudi
chabaudi]
Length = 205
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 151/203 (74%), Gaps = 3/203 (1%)
Query: 63 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 122
FKEG++VA DSRASMG +ISSQ+V+KIIEIN ++LGTMAGGAADC +W + LG +++E
Sbjct: 2 FKEGIIVAVDSRASMGSFISSQNVEKIIEINKHILGTMAGGAADCFYWEKYLGQIIKIYE 61
Query: 123 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS 182
L N +ISV AS +L+NILY Y+G GL G +++G+D TG ++Y+D EG +++G FS
Sbjct: 62 LRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDEGKKVEGNLFS 121
Query: 183 VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK- 241
GSGS YAY +LD+ Y +++S+EEA EL R AIYHATFRD SGG V+Y+ +G+ K
Sbjct: 122 CGSGSTYAYSILDTAYDYNLSVEEAVELGRNAIYHATFRDGGSGGKVRVFYIHKDGYSKI 181
Query: 242 LSGDDVGELHYHYYPVTPSTVEQ 264
+ G+DV +LHYHY PS +Q
Sbjct: 182 IEGEDVYDLHYHY--TNPSQKDQ 202
>gi|225193002|dbj|BAH29631.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193017|dbj|BAH29641.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 148/210 (70%), Gaps = 8/210 (3%)
Query: 31 FSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
F++P+ + F ++ + L H GTTTLAF F+ GV+VA DSRAS G Y++S
Sbjct: 40 FAVPVGNEPSGFLRSCNREEGVRIDLNH--GTTTLAFKFRHGVIVAVDSRASAGNYLASN 97
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N RISV ASKLL N++
Sbjct: 98 DANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNMMLG 157
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DS YK DM++
Sbjct: 158 YRGMGLSMGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSSYKEDMTV 217
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYV 234
EEA EL R I HAT RDA SGG ++Y++
Sbjct: 218 EEAYELGCRGIAHATHRDAYSGGSVNMYHM 247
>gi|300709258|ref|XP_002996795.1| hypothetical protein NCER_100054 [Nosema ceranae BRL01]
gi|239606120|gb|EEQ83124.1| hypothetical protein NCER_100054 [Nosema ceranae BRL01]
Length = 229
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 158/214 (73%), Gaps = 3/214 (1%)
Query: 41 EFQKDTKATLKHA---KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYML 97
+++ D+K KH KGTTTLAFIF+EG+++A DSRAS G YI+SQ+V K+I IN Y++
Sbjct: 15 DYKVDSKIINKHCIPYKGTTTLAFIFQEGMVIAVDSRASAGSYIASQNVHKVIRINKYLI 74
Query: 98 GTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIA 157
GTMAGGA+DC FW + +G+ + +EL N +RISV+ AS L+N +Y Y+G GLS+G+M+
Sbjct: 75 GTMAGGASDCYFWEKKMGLYAKSYELKNDKRISVSAASMFLSNCVYQYKGRGLSLGSMVC 134
Query: 158 GWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYH 217
G+D P +YYVD++G R+ G+ FSVGSGS AYGVL+ YKFD++ +EA EL ++AI+H
Sbjct: 135 GYDGDKPLIYYVDNDGKRISGSLFSVGSGSTIAYGVLNESYKFDLNKDEALELGKKAIWH 194
Query: 218 ATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
AT RDA SGG ++Y++ NGW + DV + +
Sbjct: 195 ATHRDAYSGGNVNLYFMDKNGWDHVGTFDVDKFN 228
>gi|396081986|gb|AFN83600.1| proteasome subunit beta type-5 [Encephalitozoon romaleae SJ-2008]
Length = 229
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 152/209 (72%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
QK ++ +K GTTTLAF+FKEG+++A DSRA+ G YI+SQ+V K+IEIN +LGTMAG
Sbjct: 19 QKLVRSIIKPYHGTTTLAFVFKEGMVIAVDSRATSGSYIASQTVNKVIEINRNLLGTMAG 78
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
GAADC FW + +G+ + +EL N RRI+ AS L+N +Y Y+G GLS+GTMI G+D +
Sbjct: 79 GAADCFFWEKLMGLYAKNYELTNGRRITAAAASMYLSNCVYRYKGYGLSMGTMICGYDGS 138
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
P +YYVD +G R+KG FSVGSGS AYG+L S Y+FDMS +EA EL R AI+HA RD
Sbjct: 139 IPSIYYVDDDGKRVKGNLFSVGSGSTVAYGILSSSYRFDMSKQEALELGREAIFHAAHRD 198
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGELH 251
A SGG ++YY+ +GW K+ DV + +
Sbjct: 199 AYSGGSINLYYMDKDGWTKVGSYDVDDFN 227
>gi|195347018|ref|XP_002040051.1| GM15565 [Drosophila sechellia]
gi|194135400|gb|EDW56916.1| GM15565 [Drosophila sechellia]
Length = 315
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/227 (49%), Positives = 158/227 (69%), Gaps = 1/227 (0%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
AP F P + + + + GTTTL F ++ GV++ ADSRA+ G YI SQ+++
Sbjct: 45 APPFERP-AENLPKILSHCGIHMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMR 103
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
KI+E+N YMLGT+AGGAADC +W R L +CRLH+L ++R++V A++++ NI Y+G
Sbjct: 104 KIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYKG 163
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGL +G M+AG+D+ GP L YVDSEG G FSVGSGSPYA GVLD+GY++D+S +EA
Sbjct: 164 MGLVMGMMLAGFDDEGPKLIYVDSEGMISHGQVFSVGSGSPYALGVLDTGYRYDLSDQEA 223
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+LARRAIYHAT +DA SGG+ +Y++ GW+ + D +LH Y
Sbjct: 224 YDLARRAIYHATSKDAYSGGIVRLYHIHSEGWRNICNTDCSDLHESY 270
>gi|358253538|dbj|GAA53374.1| proteasome subunit beta type-5 [Clonorchis sinensis]
Length = 541
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 137/182 (75%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F G ++A DSRAS G YI+S + KI+ IN Y+LGTMAGGAADC +W R L
Sbjct: 65 GTTTLAFKFSGGAIIATDSRASSGSYIASATTDKILIINKYLLGTMAGGAADCAYWERVL 124
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CRL EL NK R+SV ASKLLAN+LY Y+G GLS+GT I GWD+ G G+YYVD +G
Sbjct: 125 SKQCRLFELRNKERMSVAAASKLLANMLYEYKGAGLSIGTTIVGWDKKGAGIYYVDDDGQ 184
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R G FSVGSGS YAYGVLD+ YK+DM EEA ELARRAIYHAT RDAASGG ++ V
Sbjct: 185 RFTGDLFSVGSGSTYAYGVLDTMYKYDMKNEEAYELARRAIYHATHRDAASGGFINLASV 244
Query: 235 GP 236
P
Sbjct: 245 LP 246
>gi|350538201|ref|NP_001232086.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
gi|197129152|gb|ACH45650.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 278
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 147/206 (71%), Gaps = 1/206 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L+ GTTTLAF GV VA DSRA+ G YI+SQSV+K++ I MLGTMAGGAADC F
Sbjct: 71 LQILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIGGRMLGTMAGGAADCAF 130
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R + +CR+ EL NK +SV ASKLLAN++Y Y+G+GLS+GTM+ GWD+ GPGLYYV
Sbjct: 131 WQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYV 190
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGY-KFDMSIEEAAELARRAIYHATFRDAASGGV 228
DSEG R+ G F+VGSGS YAYGVLD G S E A ELARRAI A RDA SGG
Sbjct: 191 DSEGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGGC 250
Query: 229 ASVYYVGPNGWKKLSGDDVGELHYHY 254
V +VGP GW+++S DD+ EL Y
Sbjct: 251 VRVMHVGPEGWREVSHDDIAELQDKY 276
>gi|197129151|gb|ACH45649.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 278
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 147/206 (71%), Gaps = 1/206 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L+ GTTTLAF GV VA DSRA+ G YI+SQSV+K++ I MLGTMAGGAADC F
Sbjct: 71 LQILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIGGRMLGTMAGGAADCAF 130
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R + +CR+ EL NK +SV ASKLLAN++Y Y+G+GLS+GTM+ GWD+ GPGLYYV
Sbjct: 131 WQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYV 190
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGY-KFDMSIEEAAELARRAIYHATFRDAASGGV 228
DSEG R+ G F+VGSGS YAYGVLD G S E A ELARRAI A RDA SGG
Sbjct: 191 DSEGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGGC 250
Query: 229 ASVYYVGPNGWKKLSGDDVGELHYHY 254
V +VGP GW+++S DD+ EL Y
Sbjct: 251 VRVMHVGPEGWREVSHDDIAELQDKY 276
>gi|330039093|ref|XP_003239785.1| 26S proteasome SU B5 [Cryptomonas paramecium]
gi|327206710|gb|AEA38887.1| 26S proteasome SU B5 [Cryptomonas paramecium]
Length = 234
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 149/199 (74%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ + GTTTLAFI G+++A DSR+SMG YI S VKK+IEIN + LGTMAGGAADC F
Sbjct: 20 IQLSHGTTTLAFICSSGILIAVDSRSSMGKYIGSNKVKKVIEINSFFLGTMAGGAADCFF 79
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W RNLG C L+E+ N + +S++GASKLLAN++Y ++ GLS+G +IAGWD GP +Y++
Sbjct: 80 WERNLGCLCDLYEMQNNQHVSISGASKLLANMIYVHKNSGLSIGAIIAGWDHNGPEIYFI 139
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
DSEG R + SVGSGS YAYG+LD+ YK+++SIE A + +R+I+ ++++D SGG
Sbjct: 140 DSEGSRFRINIVSVGSGSTYAYGILDTDYKWNISIETACNIGKRSIFQSSYKDPFSGGSV 199
Query: 230 SVYYVGPNGWKKLSGDDVG 248
++Y++ +GW ++S D +
Sbjct: 200 NLYFIRKDGWIRISSDVIN 218
>gi|401827540|ref|XP_003887862.1| type-5 proteasome subunit beta [Encephalitozoon hellem ATCC 50504]
gi|392998869|gb|AFM98881.1| type-5 proteasome subunit beta [Encephalitozoon hellem ATCC 50504]
Length = 229
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 152/209 (72%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
Q+ ++ +K GTTTLAF+F+EG+ +A DSRA+ G YI+SQ+V K+IEIN +LGTMAG
Sbjct: 19 QRLVESIIKPYHGTTTLAFVFREGMAIAVDSRATSGSYIASQTVNKVIEINRNLLGTMAG 78
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
GAADC FW + +G+ + +EL N RRI+ AS L+N +Y Y+G GLS+GTMI G+D +
Sbjct: 79 GAADCFFWEKLMGLYAKNYELTNGRRITAAAASMYLSNCVYRYKGYGLSMGTMICGYDGS 138
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
P +YYVD +G R+KG FSVGSGS AYG+L S Y+FDM EEA ELA+RAI+HA RD
Sbjct: 139 MPSIYYVDDDGRRIKGNLFSVGSGSTIAYGILSSSYRFDMDKEEALELAKRAIFHAAHRD 198
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGELH 251
A SGG ++YY+ +GW K+ DV + +
Sbjct: 199 AYSGGSINLYYMDESGWVKVGSYDVDDFN 227
>gi|348677188|gb|EGZ17005.1| hypothetical protein PHYSODRAFT_285863 [Phytophthora sojae]
Length = 290
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 157/215 (73%), Gaps = 4/215 (1%)
Query: 41 EFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTM 100
++ +D + TL AKGTTTLAFI+ G++VA DSR++MG +I SQ VKK+ IN Y+L T+
Sbjct: 70 KYTEDNEQTLNFAKGTTTLAFIYNGGIIVAVDSRSTMGSFIGSQQVKKVNPINDYILATL 129
Query: 101 AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
AGGAADCQFW RNL ++CR++EL N+ RISV ASKL+AN Y+ G+S+G M+ G+D
Sbjct: 130 AGGAADCQFWQRNLAVQCRMYELRNRHRISVRAASKLIANTCNYYKRYGMSLGMMMMGYD 189
Query: 161 ETGPGLYYVDSEGGRLKGT----RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIY 216
P LYYVD EG R+ + +FSVGSGS YAYGVLD+ +++D++ +EA EL +RAIY
Sbjct: 190 NGKPVLYYVDDEGSRIPASKDVPKFSVGSGSTYAYGVLDTNWRWDLTDDEAVELGKRAIY 249
Query: 217 HATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
HAT RDA SGG+ +VY P G+K + DV E+H
Sbjct: 250 HATHRDAYSGGICNVYIFKPEGFKHVVHQDVKEMH 284
>gi|361131074|gb|EHL02796.1| putative proteasome component PRE2 [Glarea lozoyensis 74030]
Length = 283
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 159/227 (70%), Gaps = 4/227 (1%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD D D + H GTTTLAF F+ G++VA DSRA+ G +I+SQ+V
Sbjct: 43 AQPSAWLRAATD-DHANPDCPIKIAH--GTTTLAFRFQGGIIVATDSRATAGNWIASQTV 99
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRL+EL + RRISV ASK+LAN++YSY+
Sbjct: 100 KKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLYELRHHRRISVAAASKILANLVYSYK 159
Query: 147 GMGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
G GLS+GTM AG + GP LYY+DS+G RL G F VGSG +AYGVLD+ Y +D+S E
Sbjct: 160 GRGLSMGTMCAGVTPSEGPALYYIDSDGTRLAGNMFCVGSGQTFAYGVLDAEYSYDLSEE 219
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA L R+I AT RDA SGG ++Y+V +GW K +D + +
Sbjct: 220 EALALGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIFW 266
>gi|197129148|gb|ACH45646.1| putative proteasome C1 subunit variant 2 [Taeniopygia guttata]
gi|197129149|gb|ACH45647.1| putative proteasome C1 subunit variant 2 [Taeniopygia guttata]
Length = 279
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 146/206 (70%), Gaps = 1/206 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L+ GTTTLAF GV VA DSRA+ G YI+SQSV+K++ I MLGTMAGGAADC F
Sbjct: 71 LQILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIGGRMLGTMAGGAADCAF 130
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R + +CR+ EL NK +SV ASKLLAN++Y Y+G+GLS+GTM+ GWD+ GPGLYYV
Sbjct: 131 WQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYV 190
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGY-KFDMSIEEAAELARRAIYHATFRDAASGGV 228
DSEG R+ G F+VGSGS YAYGVLD G S E A ELARRAI A RDA SGG
Sbjct: 191 DSEGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGGC 250
Query: 229 ASVYYVGPNGWKKLSGDDVGELHYHY 254
V +VGP GW+++S D+ EL Y
Sbjct: 251 VRVMHVGPEGWREVSHHDIAELQDKY 276
>gi|146332701|gb|ABQ22856.1| proteasome subunit beta type 5 precursor-like protein [Callithrix
jacchus]
Length = 168
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 132/168 (78%)
Query: 92 INPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLS 151
INPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS
Sbjct: 1 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLS 60
Query: 152 VGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELA 211
+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +EEA +LA
Sbjct: 61 MGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLA 120
Query: 212 RRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
RRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y P
Sbjct: 121 RRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSAP 168
>gi|303390486|ref|XP_003073474.1| proteasome subunit beta type-5 [Encephalitozoon intestinalis ATCC
50506]
gi|303302620|gb|ADM12114.1| proteasome subunit beta type-5 [Encephalitozoon intestinalis ATCC
50506]
Length = 229
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 152/209 (72%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
Q+ K+ +K GTTTLAF+FKEG+++A DSRA+ G YI+SQ+VKK+IEIN +LGTMAG
Sbjct: 19 QQLIKSFIKPYYGTTTLAFVFKEGMVIAVDSRATSGPYIASQTVKKVIEINKNLLGTMAG 78
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
GAADC +W + +G+ + +EL N RRI+V+ AS L+N +Y Y+G GLS+GTM+ G+D +
Sbjct: 79 GAADCFYWEKLVGLYAKNYELTNGRRITVSAASMYLSNCVYKYKGYGLSMGTMLCGYDGS 138
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
P ++YVD G R+KG FSVGSGS AYG+L S Y+FDMS EEA L + AI+HA RD
Sbjct: 139 EPCIFYVDDAGKRIKGNLFSVGSGSTIAYGILSSCYRFDMSKEEALNLGKEAIFHAAHRD 198
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGELH 251
A SGG ++YY+ GW K+ DV + +
Sbjct: 199 AFSGGFINLYYMNEEGWTKVGSYDVNDFN 227
>gi|301120664|ref|XP_002908059.1| proteasome subunit beta type-5, putative [Phytophthora infestans
T30-4]
gi|262103090|gb|EEY61142.1| proteasome subunit beta type-5, putative [Phytophthora infestans
T30-4]
Length = 288
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 169/248 (68%), Gaps = 15/248 (6%)
Query: 19 DELCPELSAA-------PSFSLPLSTDFDEFQ----KDTKATLKHAKGTTTLAFIFKEGV 67
D+L P + A P + P + + F+ +D + +LK AKGTTTLAFI+ G+
Sbjct: 35 DDLTPNATDALAAGFMLPPVADPAAYSREHFKVKYTEDNEQSLKFAKGTTTLAFIYNGGI 94
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSR++MG +I+SQ VKK+ IN Y+L T+AGGAADCQFW RNL ++CR++EL N+
Sbjct: 95 VVAVDSRSTMGPFIASQQVKKVNPINEYILATLAGGAADCQFWQRNLAVQCRMYELRNRH 154
Query: 128 RISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT----RFSV 183
RISV ASKL+AN Y+ G+S+G M+ G+D P LYYVD EG R+ + +FSV
Sbjct: 155 RISVRAASKLIANTCNYYKRYGMSLGMMMMGYDNGEPVLYYVDDEGSRIPASKDVPKFSV 214
Query: 184 GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLS 243
GSGS YAYGVLD+ +++D++ +EA EL +RAIYHAT RDA SGG +V+ P G+K +
Sbjct: 215 GSGSTYAYGVLDTNWRWDLTDDEAVELGKRAIYHATHRDAYSGGFCNVFVFKPEGFKHVV 274
Query: 244 GDDVGELH 251
DV E+H
Sbjct: 275 HQDVKEMH 282
>gi|50660436|gb|AAT80906.1| 26S proteasome beta subunit [Lemna minor]
Length = 116
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/116 (95%), Positives = 115/116 (99%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K AKGTTTLAFIFKEGV+V+ADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF
Sbjct: 1 VKPAKGTTTLAFIFKEGVIVSADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 60
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPG 165
WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLS+GTMIAGWDETGPG
Sbjct: 61 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSIGTMIAGWDETGPG 116
>gi|403335952|gb|EJY67163.1| Proteasome subunit beta type [Oxytricha trifallax]
Length = 310
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 150/204 (73%), Gaps = 2/204 (0%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
AKGTTTLAF F EGV+VA D+RA+MG +ISS +V+K+IEIN ++LGTMAGGAADC FW +
Sbjct: 88 AKGTTTLAFEFAEGVLVAVDARATMGAFISSNNVRKVIEINDFLLGTMAGGAADCMFWEK 147
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
+ ++CR++EL N + SV AS +LA+I+ YRG GLS+GTM G D+TG LYY+D +
Sbjct: 148 YVAMQCRVYELRNGEKPSVAMASMMLASIMRQYRGQGLSMGTMFTGSDKTGASLYYIDDD 207
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
RL+G F+VGSG +AYGVLD+ Y++DMS++EA +L RAI AT++D+ASGGV +Y
Sbjct: 208 ATRLRGRLFAVGSGGTFAYGVLDTNYRYDMSLDEAVQLGIRAITSATYKDSASGGVVRIY 267
Query: 233 YVGPNGWKKLSGD--DVGELHYHY 254
+V G L D DV EL Y
Sbjct: 268 HVTNKGKWDLIHDAIDVSELQIGY 291
>gi|443926279|gb|ELU44982.1| proteasome component pts1 [Rhizoctonia solani AG-1 IA]
Length = 319
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/254 (51%), Positives = 159/254 (62%), Gaps = 30/254 (11%)
Query: 26 SAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
S PSF++P D F + D +K GTTTLAF FK G++VA DSRA+ G
Sbjct: 43 SGVPSFNIPRVPDPTAFLRLHTDDHADPSCRIKIQHGTTTLAFRFKGGIIVAVDSRATAG 102
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGA-------------------ADCQFWHRNLGIKCR 119
YI+S +VKK+IEIN Y+LGTMAGGA ADCQ+W LGI+CR
Sbjct: 103 SYIASGTVKKVIEINKYLLGTMAGGAGKSRVQCEVVLRALSGYLLADCQYWETYLGIQCR 162
Query: 120 LHELANKRRISVTGASKL-LANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
LHEL N+ RISV L L + + R L GTMIAGWD+TGP L+YVDS+G RLKG
Sbjct: 163 LHELRNRERISVAADDILCLPDSRLTCR---LPQGTMIAGWDKTGPALFYVDSDGTRLKG 219
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
FSVGSGS +AYGVLD GY +D+S EEA EL RR+IY A RDA SG ++Y+V +G
Sbjct: 220 DLFSVGSGSTFAYGVLDQGYHWDLSDEEAQELGRRSIYAAGHRDAFSGNTINLYHVKEHG 279
Query: 239 WKKLSGDDVGELHY 252
W + DV +LHY
Sbjct: 280 WDFIGNYDVTKLHY 293
>gi|440476205|gb|ELQ44826.1| proteasome component PRE2 [Magnaporthe oryzae Y34]
gi|440491104|gb|ELQ70570.1| proteasome component PRE2 [Magnaporthe oryzae P131]
Length = 251
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/227 (51%), Positives = 158/227 (69%), Gaps = 5/227 (2%)
Query: 31 FSLPLSTDFDEFQKDTKATLKHAKGTTTLAF----IFKEGVMVAADSRASMGGYISSQSV 86
+S P + F +D + L + + +L F + G++VA DSRA+ G +I+SQ+V
Sbjct: 8 YSRPAYQQNETFTEDDQQDLCDSVPSLSLKFAVPPVAHGGIIVATDSRATAGNWIASQTV 67
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGGAADCQ+W LG++CRLHEL +KRRISV ASK+LAN++Y Y+
Sbjct: 68 KKVIEINSCLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYK 127
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYY+DS+G RL G F VGSG +AYGVLD+ YK+D+S E
Sbjct: 128 GMGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYKYDLSDE 187
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+A EL RR+I AT RDA SGG ++Y+V +GW K +D + +
Sbjct: 188 DALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIFW 234
>gi|145508045|ref|XP_001439972.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407178|emb|CAK72575.1| unnamed protein product [Paramecium tetraurelia]
Length = 268
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 146/207 (70%), Gaps = 10/207 (4%)
Query: 49 TLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 108
KH GTTTL F+FKEG+++A DSRASMG ++SS+ V+K+IEIN Y+LGTMAGGAADCQ
Sbjct: 53 NFKH--GTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIEINEYLLGTMAGGAADCQ 110
Query: 109 FWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYY 168
+W L CR +EL N ++SV ASK L IL Y+ GLS+G MIAG D +G LYY
Sbjct: 111 YWLAYLANHCRTYELKNGSKLSVAAASKFLQGILIGYKNSGLSMGCMIAGTDLSGQHLYY 170
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
+D++G RLKG FSVGSGS YAY ++ +S+ EA EL RAIYHAT RD ASGGV
Sbjct: 171 IDNDGMRLKGDIFSVGSGSTYAYDMI-------LSLTEAVELGVRAIYHATHRDTASGGV 223
Query: 229 ASVYYVGPNGWKKL-SGDDVGELHYHY 254
VY++ NGW K+ G DV +LHY +
Sbjct: 224 VRVYHIHQNGWTKVHDGIDVVDLHYKF 250
>gi|154419010|ref|XP_001582522.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121916758|gb|EAY21536.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 256
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 146/197 (74%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTL+FI+ G++VA DSRA+ G +I SQ+V KI+ + P M+GTMAGGAADCQ+W RNL
Sbjct: 53 GTTTLSFIYNGGIVVAVDSRATGGQFIFSQTVMKILPLAPNMIGTMAGGAADCQYWLRNL 112
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+LH+ ++ ++V ASK+L N LY Y+G LS+G+MI G+D TGP ++Y+D+ G
Sbjct: 113 SRLIQLHKFRYQQPLTVAAASKILVNELYRYKGYNLSIGSMICGYDNTGPHIFYIDNHGS 172
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
R+ G RFSVGSGS +AYGVLD+ Y+ DM+ EEA EL RRAIYHAT+RD+ SGG SV ++
Sbjct: 173 RIAGKRFSVGSGSTHAYGVLDTCYREDMTKEEACELGRRAIYHATYRDSGSGGRVSVVHI 232
Query: 235 GPNGWKKLSGDDVGELH 251
NG + + DV ++H
Sbjct: 233 TQNGVEWIDKTDVFDMH 249
>gi|121699289|ref|XP_001267971.1| proteasome component Pre2, putative [Aspergillus clavatus NRRL 1]
gi|119396113|gb|EAW06545.1| proteasome component Pre2, putative [Aspergillus clavatus NRRL 1]
Length = 296
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 164/255 (64%), Gaps = 24/255 (9%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAAD 72
E P LS F+LP + F + + +K A GTTTLAF F+ G++VA D
Sbjct: 28 ESLPPLSL--KFALPPVANSSAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATD 85
Query: 73 SRASMGGYISSQSVKKIIEIN--------------PYMLGTMAGGAADCQFWHRNLGIKC 118
SRA+ G +I+SQ+VKK+I ++ P +LGTMAGGAADCQ+W R L +C
Sbjct: 86 SRATAGNWIASQTVKKVIPVSRLSRGEDKKQNAPVPGLLGTMAGGAADCQYWLRYLSQQC 145
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLK 177
LHE+ +KRRI+V ASK+LAN+ YSY+GMGLS+GTM+AG + GP LYY+DS+G RL
Sbjct: 146 TLHEIRHKRRITVAAASKILANLTYSYKGMGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
G F VGSG +AYGVLD+ Y++D++ EEA +L RR+I A RDA SGG ++Y+V
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYRYDLTEEEALQLGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 238 GWKKLSGDDVGELHY 252
GW DD+ + +
Sbjct: 266 GWVHHGFDDMNPIFW 280
>gi|159124282|gb|EDP49400.1| proteasome component Pre2, putative [Aspergillus fumigatus A1163]
Length = 296
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 164/255 (64%), Gaps = 24/255 (9%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAAD 72
E P LS F+LP + F + + +K A GTTTLAF F+ G++VA D
Sbjct: 28 ESLPPLSL--KFALPPVANSSAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATD 85
Query: 73 SRASMGGYISSQSVKKIIEIN--------------PYMLGTMAGGAADCQFWHRNLGIKC 118
SRA+ G +I+SQ+VKK+I ++ P +LGTMAGGAADCQ+W R L +C
Sbjct: 86 SRATAGNWIASQTVKKVIPVSRLSRGEDKKQDTPVPGLLGTMAGGAADCQYWLRYLSQQC 145
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLK 177
LHE+ +KRRI+V ASK+LAN+ Y+Y+GMGLS+GTM+AG + GP LYY+DS+G RL
Sbjct: 146 TLHEIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMTPQEGPALYYIDSDGTRLS 205
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
G F VGSG +AYGVLD+ Y++D++ EEA EL RR+I A RDA SGG ++Y+V
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 238 GWKKLSGDDVGELHY 252
GW DD+ + +
Sbjct: 266 GWVHHGFDDMNPIFW 280
>gi|242777485|ref|XP_002479043.1| proteasome component Pre2, putative [Talaromyces stipitatus ATCC
10500]
gi|218722662|gb|EED22080.1| proteasome component Pre2, putative [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 156/232 (67%), Gaps = 19/232 (8%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P ++ SF ++ D + A +K A GTTTLAF F+ G++VA DSRA+ G +I+
Sbjct: 40 PPVAKPSSFLRAMTDD----HSNPSAPIKLAHGTTTLAFRFQHGIIVATDSRATAGNWIA 95
Query: 83 SQSVKKIIEIN--------------PYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRR 128
SQ+VKK+I ++ P +LGTMAG AADCQ+W R LG +C LHEL +KRR
Sbjct: 96 SQTVKKVIPVSRLNLALDKDHDAPVPGLLGTMAGTAADCQYWLRYLGEQCTLHELRHKRR 155
Query: 129 ISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGS 187
I+V ASK+LAN+ YSY+ MGL +GTM+AG + GP LYY+DS+G RL G F VGSG
Sbjct: 156 ITVAAASKILANLTYSYKSMGLGMGTMLAGMTPQEGPALYYIDSDGTRLAGNLFCVGSGQ 215
Query: 188 PYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
+AYGVLD+ Y++D+S +EA EL RR+I AT RDA SGG ++Y+V GW
Sbjct: 216 TFAYGVLDAEYRYDLSTDEALELGRRSILAATHRDAYSGGYINLYHVKEEGW 267
>gi|119469453|ref|XP_001257946.1| proteasome component Pre2, putative [Neosartorya fischeri NRRL 181]
gi|119406098|gb|EAW16049.1| proteasome component Pre2, putative [Neosartorya fischeri NRRL 181]
Length = 296
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 164/255 (64%), Gaps = 24/255 (9%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAAD 72
E P LS F+LP + F + + +K A GTTTLAF F+ G++VA D
Sbjct: 28 ESLPPLSL--KFALPPVANSSAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATD 85
Query: 73 SRASMGGYISSQSVKKIIEIN--------------PYMLGTMAGGAADCQFWHRNLGIKC 118
SRA+ G +I+SQ+VKK+I ++ P +LGTMAGGAADCQ+W R L +C
Sbjct: 86 SRATAGNWIASQTVKKVIPVSRLSRGEDKKQDTPVPGLLGTMAGGAADCQYWLRYLSQQC 145
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLK 177
LHE+ +KRRI+V ASK+LAN+ Y+Y+GMGLS+GTM+AG + GP LYY+DS+G RL
Sbjct: 146 TLHEIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
G F VGSG +AYGVLD+ Y++D++ EEA EL RR+I A RDA SGG ++Y+V
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 238 GWKKLSGDDVGELHY 252
GW DD+ + +
Sbjct: 266 GWVHHGFDDMNPIFW 280
>gi|212533187|ref|XP_002146750.1| proteasome component Pre2, putative [Talaromyces marneffei ATCC
18224]
gi|210072114|gb|EEA26203.1| proteasome component Pre2, putative [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 155/232 (66%), Gaps = 19/232 (8%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P +S SF ++ D + A +K A GTTTLAF F+ G++VA DSRA+ G +I+
Sbjct: 40 PPISKPSSFLRAMTDD----HSNPSAPIKLAHGTTTLAFRFQHGIIVATDSRATAGNWIA 95
Query: 83 SQSVKKIIEIN--------------PYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRR 128
SQ+VKK+I ++ P +LGTMAG AADCQ+W R L +C LHEL +KRR
Sbjct: 96 SQTVKKVIPVSRLNMALDKNHNAPVPGLLGTMAGTAADCQYWLRYLAEQCTLHELRHKRR 155
Query: 129 ISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGS 187
I+V ASK+LAN+ YSY+ MGL +GTM+AG + GP LYY+DS+G RL G F VGSG
Sbjct: 156 ITVAAASKILANLTYSYKSMGLGMGTMLAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQ 215
Query: 188 PYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
+AYGVLD+ Y++D+S +EA EL RR+I AT RDA SGG ++Y+V GW
Sbjct: 216 TFAYGVLDAEYRYDLSTDEALELGRRSILAATHRDAYSGGYINLYHVKEEGW 267
>gi|378756625|gb|EHY66649.1| proteasome subunit beta type [Nematocida sp. 1 ERTm2]
Length = 214
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 142/201 (70%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT +FI K+G++VA DSRA+ G YI+SQ+V K+I++N Y+LGTMAGGAADC +W R
Sbjct: 13 KGTTTASFITKDGIVVAVDSRATSGSYIASQTVNKVIQVNKYLLGTMAGGAADCFYWERA 72
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+G HEL RI V GA+K L+ L +Y+G GLS+G+M+ GW TGP +YYVD G
Sbjct: 73 MGDYAMKHELKYGERIPVAGAAKYLSATLNAYKGRGLSIGSMVCGWGSTGPAIYYVDDSG 132
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
+ G FSVGSGS +AYG+L+ GY ++M E+A ELARRAI+HA DA SGG ++Y+
Sbjct: 133 NCINGKLFSVGSGSLFAYGILNPGYSYEMEKEDAIELARRAIFHAGHSDAYSGGTVNIYF 192
Query: 234 VGPNGWKKLSGDDVGELHYHY 254
+ NGW K+ DV L+ Y
Sbjct: 193 IDENGWTKIDSQDVSCLYDKY 213
>gi|387594504|gb|EIJ89528.1| proteasome subunit beta [Nematocida parisii ERTm3]
gi|387596654|gb|EIJ94275.1| proteasome subunit beta [Nematocida parisii ERTm1]
Length = 215
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 143/201 (71%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT +FI K+G++VA DSRA+ G YI+SQ+V K+I++N Y+LGTMAGGAADC +W R
Sbjct: 13 KGTTTASFITKDGIVVAVDSRATSGSYIASQTVNKVIQVNKYLLGTMAGGAADCFYWERA 72
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+G HEL RI V GA+K L+ L +Y+G GLS+G+M+ GW +GP +YYVD G
Sbjct: 73 MGNYAMQHELKYGERIPVAGAAKYLSATLNAYKGRGLSIGSMVCGWGSSGPAIYYVDDSG 132
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
+ G FSVGSGS +AYG+L++GYK++M E+A ELARRAI+HA DA SGG ++Y+
Sbjct: 133 NCVNGKLFSVGSGSLFAYGILNTGYKYEMDKEDAIELARRAIFHAGHSDAYSGGTVNIYF 192
Query: 234 VGPNGWKKLSGDDVGELHYHY 254
+ GW K+ DV L+ Y
Sbjct: 193 IDETGWSKVDSQDVSCLYDKY 213
>gi|317032170|ref|XP_001394180.2| proteasome component PRE2 [Aspergillus niger CBS 513.88]
gi|350631028|gb|EHA19399.1| hypothetical protein ASPNIDRAFT_52883 [Aspergillus niger ATCC 1015]
Length = 296
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 163/255 (63%), Gaps = 24/255 (9%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAAD 72
E P LS F+LP + F + + +K A GTTTLAF F+ G++VA D
Sbjct: 28 ESLPPLSL--KFNLPPVDNSRAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATD 85
Query: 73 SRASMGGYISSQSVKKII--------------EINPYMLGTMAGGAADCQFWHRNLGIKC 118
SRA+ G +I+SQ+VKK+I E P +LGTMAGGAADCQ+W R L +C
Sbjct: 86 SRATAGNWIASQTVKKVIPVSRLSRGEDKPSNEPTPGLLGTMAGGAADCQYWLRYLSQQC 145
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLK 177
LHE+ +KRRI+V ASK+LAN+ Y+Y+GMGLS+GTM+AG + GP LYY+DS+G RL
Sbjct: 146 TLHEIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
G F VGSG +AYGVLD+ Y++D++ EEA EL RR+I A RDA SGG ++Y+V
Sbjct: 206 GNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 238 GWKKLSGDDVGELHY 252
GW +D+ + +
Sbjct: 266 GWVHHGFNDMNPIFW 280
>gi|146332395|gb|ABQ22703.1| proteasome subunit beta type 5 precursor-like protein [Callithrix
jacchus]
Length = 164
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 128/164 (78%)
Query: 96 MLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTM 155
+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTM
Sbjct: 1 LLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTM 60
Query: 156 IAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAI 215
I GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +EEA +LARRAI
Sbjct: 61 ICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAI 120
Query: 216 YHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
Y AT+RDA SGG ++Y+V +GW ++S D+V +LH Y P
Sbjct: 121 YQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSAP 164
>gi|147225185|emb|CAN13317.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 252
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 148/233 (63%), Gaps = 30/233 (12%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFLRSLGGDGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
DCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ------------------------DCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNM 134
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSG+++D
Sbjct: 135 MYQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYD 194
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+SIEEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 195 LSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQY 247
>gi|169769717|ref|XP_001819328.1| proteasome component PRE2 [Aspergillus oryzae RIB40]
gi|238487964|ref|XP_002375220.1| proteasome component Pre2, putative [Aspergillus flavus NRRL3357]
gi|83767187|dbj|BAE57326.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700099|gb|EED56438.1| proteasome component Pre2, putative [Aspergillus flavus NRRL3357]
Length = 296
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 151/218 (69%), Gaps = 15/218 (6%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEIN--------------PY 95
+K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK+I ++ P
Sbjct: 63 IKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSRGEDKANNAPTPG 122
Query: 96 MLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTM 155
+LGTMAGGAADCQ+W R L +C LHE+ +KRRI+V ASK+LAN+ Y+Y+G GLS+GTM
Sbjct: 123 LLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYGLSMGTM 182
Query: 156 IAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRA 214
+AG + GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA EL RR+
Sbjct: 183 LAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRS 242
Query: 215 IYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
I A RDA SGG ++Y+V GW DD+ + +
Sbjct: 243 ILAAMHRDAYSGGFINLYHVKEEGWVHHGFDDMNPIFW 280
>gi|70991743|ref|XP_750720.1| proteasome component Pre2 [Aspergillus fumigatus Af293]
gi|66848353|gb|EAL88682.1| proteasome component Pre2, putative [Aspergillus fumigatus Af293]
Length = 296
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 163/255 (63%), Gaps = 24/255 (9%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAAD 72
E P LS F+LP + F + + +K A GTTTLAF F+ G++VA D
Sbjct: 28 ESLPPLSL--KFALPPVANSSAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATD 85
Query: 73 SRASMGGYISSQSVKKIIEIN--------------PYMLGTMAGGAADCQFWHRNLGIKC 118
SRA+ G +I+SQ+VKK+I ++ P +LGTMAGGAADCQ+W R L +C
Sbjct: 86 SRATAGNWIASQTVKKVIPVSRLSRGEDKKQDTPVPGLLGTMAGGAADCQYWLRYLSQQC 145
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLK 177
LHE+ +KRRI+V ASK+LAN+ Y+Y+GMGLS+GTM+AG + GP LYY+DS+G RL
Sbjct: 146 TLHEIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMTPQEGPALYYIDSDGTRLS 205
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
G F VGSG +AYGVLD+ Y++D++ EEA EL R+I A RDA SGG ++Y+V
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGCRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 238 GWKKLSGDDVGELHY 252
GW DD+ + +
Sbjct: 266 GWVHHGFDDMNPIFW 280
>gi|67526949|ref|XP_661536.1| hypothetical protein AN3932.2 [Aspergillus nidulans FGSC A4]
gi|40740051|gb|EAA59241.1| hypothetical protein AN3932.2 [Aspergillus nidulans FGSC A4]
gi|259481493|tpe|CBF75064.1| TPA: proteasome component Pre2, putative (AFU_orthologue;
AFUA_6G08310) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 162/255 (63%), Gaps = 24/255 (9%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAAD 72
E P LS F+LP + F + + +K A GTTTLAF F+ G++V D
Sbjct: 28 ESLPPLSL--KFALPPVANQSAFLRAMTDDHSNPNCPIKLAHGTTTLAFRFQGGIIVCTD 85
Query: 73 SRASMGGYISSQSVKKIIEIN--------------PYMLGTMAGGAADCQFWHRNLGIKC 118
SRA+ G +I+SQ+VKK+I ++ P +LGTMAGGAADCQ+W R L +C
Sbjct: 86 SRATAGNWIASQTVKKVIPVSRLSRGEDKPGSAPVPGLLGTMAGGAADCQYWLRYLSQQC 145
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAG-WDETGPGLYYVDSEGGRLK 177
LHE+ +KRRI+V ASK+LAN+ Y+Y+G GLS+GTM+AG + GP LYY+DS+G RL
Sbjct: 146 TLHEIRHKRRITVAAASKILANLTYAYKGYGLSMGTMLAGVTPQEGPALYYIDSDGTRLP 205
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
G F VGSG +AYGVLD+ Y++D++ EEA EL RR+I A RDA SGG ++Y+V
Sbjct: 206 GNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 238 GWKKLSGDDVGELHY 252
GW DD+ + +
Sbjct: 266 GWVHHGFDDMNPIFW 280
>gi|440492714|gb|ELQ75258.1| 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2
[Trachipleistophora hominis]
Length = 251
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 153/217 (70%), Gaps = 4/217 (1%)
Query: 35 LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINP 94
L D D +QK +K KGTTTLAFIFKEG+ +A DSRA+ G YI+S++V K+I +N
Sbjct: 32 LRNDVD-YQK-INDMVKPFKGTTTLAFIFKEGIAIAVDSRATSGSYIASRTVHKVIRVNN 89
Query: 95 YMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGT 154
Y+L TMAGGAADC +W + +G +L+E+ N +R+ V A L N + RG LS+GT
Sbjct: 90 YLLTTMAGGAADCLYWEKRMGAFAKLYEVTNGKRLPVPAAVNYLRNCIVGRRG--LSIGT 147
Query: 155 MIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRA 214
M+ GWD+ GP +YY+D++G +KGT FSVGSGS AYG+L+S Y++DMS +E +LAR A
Sbjct: 148 MVCGWDDKGPNIYYLDNDGTMVKGTVFSVGSGSTIAYGLLNSNYRYDMSRDEGLKLARDA 207
Query: 215 IYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
I++AT+RDA SGG ++Y++ NGW+ + DV L+
Sbjct: 208 IFYATYRDAYSGGFVNLYFMDNNGWQHVGQYDVNGLY 244
>gi|38047537|gb|AAR09671.1| similar to Drosophila melanogaster Prosbeta5, partial [Drosophila
yakuba]
Length = 161
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 125/161 (77%)
Query: 92 INPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLS 151
IN +MLGT+AGGAADC +W R L +CRLHEL NK RISV ASK++ANI + Y+GMGLS
Sbjct: 1 INQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLS 60
Query: 152 VGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELA 211
+G M+AG+D+ GPGLYYVDSEG R G FSVGSGS YAYGVLDSGY +D+ EEA EL
Sbjct: 61 MGMMLAGFDKRGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDEEAQELG 120
Query: 212 RRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
RRAIYHATFRDA SGG+ VY++ +GW +S D ELHY
Sbjct: 121 RRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELHY 161
>gi|429964048|gb|ELA46046.1| hypothetical protein VCUG_02464 [Vavraia culicis 'floridensis']
Length = 235
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 154/217 (70%), Gaps = 4/217 (1%)
Query: 35 LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINP 94
L D D +QK +K KGTTTLAFIFKEG+ +A DSRA+ G YI+SQSV K+I +N
Sbjct: 16 LRNDVD-YQK-IHDMVKPYKGTTTLAFIFKEGIAIAVDSRATSGSYIASQSVHKVIRVNK 73
Query: 95 YMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGT 154
Y++ TMAGGAADC +W + +G +L+E+ N RR+ V A L N + GLS+GT
Sbjct: 74 YLVSTMAGGAADCLYWEKRMGAFAKLYEVTNGRRLPVPAAVNYLRNCVVG--KSGLSIGT 131
Query: 155 MIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRA 214
M+ GWD+ GP +YY+D+EG +KGT FSVGSGS AYGVL++ Y++DMS +EA +LAR +
Sbjct: 132 MVCGWDDNGPEIYYLDNEGTMVKGTVFSVGSGSTIAYGVLNTSYRYDMSRDEALKLARDS 191
Query: 215 IYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
I++AT+RDA SGG ++Y++ +GW+ + DV +L+
Sbjct: 192 IFYATYRDAYSGGSCNLYFMDNDGWQHVGQYDVKDLY 228
>gi|195579820|ref|XP_002079757.1| GD24120 [Drosophila simulans]
gi|194191766|gb|EDX05342.1| GD24120 [Drosophila simulans]
Length = 279
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 148/232 (63%), Gaps = 1/232 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P AP F P + ++ ++ + GTTT+ F+++ G+++ DSRA+ G +I
Sbjct: 40 PLAIMAPPFENPRES-VNKLNAVSEVQMDFDHGTTTVGFVYQGGIILCVDSRATAGSFIG 98
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQS+ KI+++N YM+GTMAGGAADC +W R L +CRLHEL K R+ V A+K + N+
Sbjct: 99 SQSMHKIVQVNQYMMGTMAGGAADCTYWDRALTRECRLHELRYKERLPVRSAAKYICNVA 158
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+GMG+ +G M+AGW GP L YVDS G RL G F+VGSG+P A G+LDS Y+ D+
Sbjct: 159 TEYKGMGICMGMMLAGWAPEGPSLVYVDSTGLRLHGKLFAVGSGAPIALGILDSDYRLDL 218
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
S EA +LA ++YHAT D SGGV +Y++ W+ ++ D ELH Y
Sbjct: 219 SDTEAYDLAFLSVYHATMTDIFSGGVVRLYHMDQGNWRNVANKDCQELHEQY 270
>gi|391863500|gb|EIT72808.1| 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2
[Aspergillus oryzae 3.042]
Length = 245
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 151/218 (69%), Gaps = 15/218 (6%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEIN--------------PY 95
+K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK+I ++ P
Sbjct: 12 IKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSRGEDKANNAPTPG 71
Query: 96 MLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTM 155
+LGTMAGGAADCQ+W R L +C LHE+ +KRRI+V ASK+LAN+ Y+Y+G GLS+GTM
Sbjct: 72 LLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYGLSMGTM 131
Query: 156 IAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRA 214
+AG + GP LYY+DS+G RL G F VGSG +AYGVLD+ Y++D++ EEA EL RR+
Sbjct: 132 LAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRS 191
Query: 215 IYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
I A RDA SGG ++Y+V GW DD+ + +
Sbjct: 192 ILAAMHRDAYSGGFINLYHVKEEGWVHHGFDDMNPIFW 229
>gi|217644449|gb|ABD61730.2| 26S proteasome beta subunit [Lupinus albus]
Length = 127
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/110 (96%), Positives = 108/110 (98%)
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
+TLAFIFK+GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI
Sbjct: 1 STLAFIFKDGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 60
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGL 166
KCRLHELANKRRISVTGASKLLANILYSYR MG SVGTMIAGWDETGPGL
Sbjct: 61 KCRLHELANKRRISVTGASKLLANILYSYRRMGYSVGTMIAGWDETGPGL 110
>gi|115398830|ref|XP_001215004.1| proteasome component PRE2 precursor [Aspergillus terreus NIH2624]
gi|114191887|gb|EAU33587.1| proteasome component PRE2 precursor [Aspergillus terreus NIH2624]
Length = 296
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 163/255 (63%), Gaps = 24/255 (9%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAAD 72
E P LS F+LP + F + + +K A GTTTLAF F+ G++VA D
Sbjct: 28 ESLPPLSL--KFNLPPIDNSRAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATD 85
Query: 73 SRASMGGYISSQSVKKIIEIN--------------PYMLGTMAGGAADCQFWHRNLGIKC 118
SRA+ G +I+SQ+VKK+I ++ P +LGTMAGGAADCQ+W R L +C
Sbjct: 86 SRATAGNWIASQTVKKVIPVSRLSRGEDKPTDAPTPGLLGTMAGGAADCQYWLRYLSQQC 145
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLK 177
LHE+ +KRRI+V ASK+LAN+ Y+Y+G GLS+GTM+AG + GP LYY+DS+G RL
Sbjct: 146 TLHEIRHKRRITVAAASKILANLTYAYKGYGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
G F VGSG +AYGVLD+ Y++D++ EEA EL RR+I A RDA SGG ++Y+V
Sbjct: 206 GNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 238 GWKKLSGDDVGELHY 252
GW +D+ + +
Sbjct: 266 GWVHHGFNDMNPIFW 280
>gi|255948078|ref|XP_002564806.1| Pc22g07900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591823|emb|CAP98078.1| Pc22g07900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 296
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/252 (47%), Positives = 159/252 (63%), Gaps = 24/252 (9%)
Query: 23 PELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRA 75
P LS FSLP + F + + +K A GTTTLAF F+ G++V DSRA
Sbjct: 31 PPLSL--KFSLPPVDNRSAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVCTDSRA 88
Query: 76 SMGGYISSQSVKKII--------------EINPYMLGTMAGGAADCQFWHRNLGIKCRLH 121
+ G +I+SQ+VKK+I E P +LGTMAGGAADCQ+W R L +C LH
Sbjct: 89 TAGNWIASQTVKKVIPVSRLSRGEDKKTNEPTPGLLGTMAGGAADCQYWLRYLSQQCTLH 148
Query: 122 ELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTR 180
E+ +KRRI+V ASK+LAN+ Y+Y+G GLS+GTM+AG + GP LYY+DS+G RL G
Sbjct: 149 EIRHKRRITVAAASKILANLTYAYKGYGLSMGTMLAGMTPQEGPALYYIDSDGTRLPGNL 208
Query: 181 FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
F VGSG +AYGVLD+ YK++++ EEA L RRAI A RDA SGG ++Y+V GW
Sbjct: 209 FCVGSGQTFAYGVLDAEYKYELTEEEALNLGRRAILAAMHRDAYSGGFINLYHVKEEGWV 268
Query: 241 KLSGDDVGELHY 252
DD+ + +
Sbjct: 269 HHGFDDMNPIFW 280
>gi|195134726|ref|XP_002011788.1| GI10892 [Drosophila mojavensis]
gi|193906911|gb|EDW05778.1| GI10892 [Drosophila mojavensis]
Length = 322
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/226 (46%), Positives = 157/226 (69%), Gaps = 2/226 (0%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
+ D K L H GTTTL F +K G+++AADSRAS G +I+SQS++K+++++ +LGT+AG
Sbjct: 63 KDDAKVELTH--GTTTLGFKYKGGIILAADSRASNGNFIASQSMRKVVQVHKKILGTIAG 120
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
GAADC +W R L ++CRLHEL R +SV +++L+NI Y RG+GLS+G M+AG+D
Sbjct: 121 GAADCVYWDRVLTMECRLHELTYHRPLSVKSVARILSNIAYKLRGLGLSMGMMLAGYDFD 180
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GP L YVD +G ++G FSVGSG +A G+LDS YK+DM EEA LA R+IYHAT+ D
Sbjct: 181 GPRLVYVDGDGSSVEGHLFSVGSGCCFALGILDSYYKYDMEDEEAYCLAMRSIYHATYLD 240
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268
+ +GG+ +Y++ N W+ ++ D +L + PV + +E ++
Sbjct: 241 SYTGGLVRLYHMRENDWETVTVKDCADLREIFRPVNQNESLEEFSK 286
>gi|324512155|gb|ADY45042.1| Proteasome subunit beta type-5 [Ascaris suum]
Length = 282
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/249 (50%), Positives = 161/249 (64%), Gaps = 13/249 (5%)
Query: 19 DELCPELSAAPSFSLPL---STDFDE--FQKDTKA-TLKHAKGTTTLAFIF-------KE 65
D + P SA PL + DF E F K++ A L+ KGTTTLAFI+ K
Sbjct: 18 DLIEPIPSACSFIEPPLGINAKDFVETHFGKNSAAKNLQFRKGTTTLAFIYEPKTENDKG 77
Query: 66 GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELAN 125
G+++A DSRAS G YISS+SV KI++I M+ TMAGGAADCQFW R + C L+EL
Sbjct: 78 GIIIAVDSRASAGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELRE 137
Query: 126 KRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGS 185
K I+V ASK +N+LY YR GLSVG+MIAG+D+ GP ++ VDSEG R + SVGS
Sbjct: 138 KSEITVAAASKYFSNVLYGYRNYGLSVGSMIAGYDKRGPAIFKVDSEGQREQLRLCSVGS 197
Query: 186 GSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGD 245
GS AYGVLD+ Y+ M+ EEA L RRAI HATFRD+ SGGV ++ ++ P G +L
Sbjct: 198 GSLSAYGVLDTFYQPKMTDEEARALGRRAIMHATFRDSGSGGVCNMVHITPKGKIRLPKL 257
Query: 246 DVGELHYHY 254
DV +L Y +
Sbjct: 258 DVSQLFYEF 266
>gi|194880359|ref|XP_001974418.1| GG21097 [Drosophila erecta]
gi|190657605|gb|EDV54818.1| GG21097 [Drosophila erecta]
Length = 245
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 150/232 (64%), Gaps = 1/232 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P AP F P ++ + + GTTT+ F+++ G+++ DSRA+ G +I
Sbjct: 4 PLAIMAPPFENPRER-VNKLSALGEVQMDWDHGTTTVGFVYQGGIILCVDSRATSGKFIG 62
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ+V+K++++N YMLGTMAGGAADC +W R L +CRLHEL K R+ V A++ + N+
Sbjct: 63 SQNVQKVVQVNKYMLGTMAGGAADCTYWDRALTRECRLHELRFKERLPVRSAARFICNVA 122
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+GMGL +G M+AGW G L YVDS+G RL G F+VGSGS A G+LD+ Y+ D+
Sbjct: 123 AEYKGMGLCMGMMLAGWSPEGFSLVYVDSDGLRLHGKVFAVGSGSHNALGILDTDYRLDL 182
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
S +EA +LA RA+YHAT RD SGG+ +Y++ + W+ ++ D ELH Y
Sbjct: 183 SDDEAYDLAFRAVYHATMRDIFSGGLVRLYHMDQDNWRNVANKDCHELHEKY 234
>gi|195149838|ref|XP_002015862.1| GL11283 [Drosophila persimilis]
gi|194109709|gb|EDW31752.1| GL11283 [Drosophila persimilis]
Length = 305
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 149/232 (64%), Gaps = 17/232 (7%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P AP F P+ + + + A GTTTL F ++ GV++ ADSRA+ G YI
Sbjct: 40 PYALMAPPFEDPVE-NLPKILAHCGVKMDFAHGTTTLGFRYQGGVVLCADSRATSGQYIG 98
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ++KKI+E+N YMLGT+AGGAADC +W R L RLHEL KRR+S
Sbjct: 99 SQTMKKIVELNDYMLGTLAGGAADCVYWDRVLARDSRLHELRFKRRLS------------ 146
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
GMGL +G M+AG+D+ GP L YVDSEG R G F+VGSGSPYA GVLD+G++F M
Sbjct: 147 ----GMGLVMGMMLAGYDDEGPKLIYVDSEGMRCHGNVFAVGSGSPYALGVLDTGHRFTM 202
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+ +EA +LARRAIYHAT +DA SGG+ +Y++ GW+ +S D EL+ Y
Sbjct: 203 TDQEAFDLARRAIYHATSKDAYSGGIVRLYHINEKGWRNVSNTDCSELYNVY 254
>gi|126278096|ref|XP_001379947.1| PREDICTED: proteasome subunit beta type-11-like [Monodelphis
domestica]
Length = 261
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 158/234 (67%), Gaps = 2/234 (0%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
+ L P LS A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S
Sbjct: 13 EALRPHLSGAGDWAVPRGYDPRVFLQTQGPDLAH--GTTTLAFRFQHGVIAAADTRSSCN 70
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
Y++ S +K+I ++ +++GT +G +ADC W+R L + RL L + SV GA+KLL
Sbjct: 71 NYVACPSSQKVIPVHQHLIGTTSGTSADCATWYRILQRELRLRALREGQLPSVAGAAKLL 130
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
+++L+ YRG+GL V T + GWD+ GP L+YV S+G L G FSVGSGSPYAYGV+D GY
Sbjct: 131 SSMLFHYRGLGLCVATALCGWDQAGPALFYVYSDGTLLSGDVFSVGSGSPYAYGVMDRGY 190
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
++DM+IEEA LAR+A+ HAT RDA SGG +Y+V +GW+++S +D L++
Sbjct: 191 RYDMTIEEAYTLARQAVAHATRRDAYSGGSVDLYHVKASGWERVSREDACVLYF 244
>gi|195539356|ref|NP_001124197.1| proteasome subunit beta type-5 isoform 2 [Homo sapiens]
gi|332223028|ref|XP_003260673.1| PREDICTED: proteasome subunit beta type-5 isoform 4 [Nomascus
leucogenys]
Length = 160
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 125/160 (78%)
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
MAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GW
Sbjct: 1 MAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW 60
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT
Sbjct: 61 DKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQAT 120
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
+RDA SGG ++Y+V +GW ++S D+V +LH Y TP
Sbjct: 121 YRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP 160
>gi|195344758|ref|XP_002038946.1| GM17255 [Drosophila sechellia]
gi|194134076|gb|EDW55592.1| GM17255 [Drosophila sechellia]
Length = 279
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 147/232 (63%), Gaps = 1/232 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P AP F P + ++ ++ + GTTT+ F+++ G+++ DSRA+ G +I
Sbjct: 40 PLAIMAPPFENPRES-VNKLNAVSEVQMDFDHGTTTVGFVYQGGIILCVDSRATAGNFIG 98
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
S S+ K++++N YM+GTMAGGAADC +W R L +CRLHEL K R+ V A+K + N+
Sbjct: 99 SHSMHKVMQVNQYMMGTMAGGAADCTYWDRALTRECRLHELRYKERLPVRSAAKYICNVA 158
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+GMG+ +G M+AGW GP L YVDS G RL G F+VGSG+P A G+LDS Y+ D+
Sbjct: 159 TEYKGMGICMGMMLAGWAPEGPSLVYVDSNGLRLHGKLFAVGSGAPIALGILDSDYRLDL 218
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
S EA +LA ++YHAT D SGGV +Y++ W+ ++ D ELH Y
Sbjct: 219 SDTEAYDLAFLSVYHATMTDIFSGGVVRLYHMDQGNWRNVANKDCQELHEQY 270
>gi|195483797|ref|XP_002090437.1| GE12802 [Drosophila yakuba]
gi|194176538|gb|EDW90149.1| GE12802 [Drosophila yakuba]
Length = 246
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 149/232 (64%), Gaps = 1/232 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P AP F P + ++ ++ + GTTT+ F+++ G+++ DSR + G +I
Sbjct: 4 PLTIMAPPFENPRES-VNKLSAQSEVQMDCDHGTTTVGFVYQGGIILCVDSRTTSGKFIG 62
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQS++K++++ YMLGTMAGGAADC +W R L +CRLHEL K R+ V A++ + N+
Sbjct: 63 SQSLQKVVQVIQYMLGTMAGGAADCTYWDRALTRECRLHELRYKERLPVRSAARFICNVA 122
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+GMGL +G M+AGW G L YVDS+G RL G F+VGSG+ A G+LD+ Y+ D+
Sbjct: 123 AEYKGMGLCMGMMLAGWSPEGSSLVYVDSDGLRLHGKVFAVGSGASNALGILDTDYRLDL 182
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
S EA +LA RA+YHAT RD SGG+ +Y++ + W+ ++ D ELH Y
Sbjct: 183 SDNEAYDLAFRAVYHATMRDIFSGGLVRLYHIDQDNWRNVANKDCQELHGKY 234
>gi|162606150|ref|XP_001713590.1| 26S proteasome SU B5 [Guillardia theta]
gi|13794510|gb|AAK39885.1|AF165818_93 26S proteasome SU B5 [Guillardia theta]
Length = 205
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 138/193 (71%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+++ GTTTLAFIF+ G++V+ DSRASMG Y+ S V+KI+EI+ +LGTMAGGAADC F
Sbjct: 6 IRYLHGTTTLAFIFRGGIIVSVDSRASMGSYVGSSKVRKILEISNNLLGTMAGGAADCFF 65
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W RNL C++ E+ N +++SV G+SK+L +++ +Y+ GLS+GTMI GWD+ GP +YYV
Sbjct: 66 WERNLSSLCKIFEIRNNQKLSVAGSSKVLMSMISNYKNAGLSMGTMILGWDKNGPNIYYV 125
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
DSEG R+K SVGSG +AY +LDSGY + I EA +L R AI A D SGG
Sbjct: 126 DSEGSRIKIKIISVGSGCLFAYSILDSGYNWFTRINEAIDLGRNAIVQAALNDPYSGGYN 185
Query: 230 SVYYVGPNGWKKL 242
++Y V NGW K+
Sbjct: 186 NLYLVRSNGWIKI 198
>gi|426376395|ref|XP_004054986.1| PREDICTED: proteasome subunit beta type-5 isoform 7 [Gorilla
gorilla gorilla]
Length = 160
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 124/160 (77%)
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
MAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GW
Sbjct: 1 MAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW 60
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +E+A +LARRAIY AT
Sbjct: 61 DKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQAT 120
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 259
+RDA SGG ++Y+V +GW ++S D+V +LH Y P
Sbjct: 121 YRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSAP 160
>gi|195457144|ref|XP_002075445.1| GK18059 [Drosophila willistoni]
gi|194171530|gb|EDW86431.1| GK18059 [Drosophila willistoni]
Length = 311
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/213 (49%), Positives = 145/213 (68%), Gaps = 1/213 (0%)
Query: 42 FQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMA 101
F+K T + +GTTTL FIF+ G+++ ADSRA+ G +I S ++KI+EIN +LGTMA
Sbjct: 58 FEK-TNTKINLTRGTTTLGFIFQGGIVLCADSRATSGIFIGSNEMEKIVEINDNLLGTMA 116
Query: 102 GGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 161
G A DC +W R L + RL+EL KR++ V A++++ N + +RGMGLS+G M+AGW
Sbjct: 117 GCAGDCCYWDRVLMRESRLYELRFKRKLPVRAAARMICNTAFQFRGMGLSMGMMLAGWGP 176
Query: 162 TGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFR 221
TGP L YVDS+G RL G+ F VGSGS A GV D ++FDM+ EEA ELA RA+Y+AT+
Sbjct: 177 TGPQLAYVDSDGERLYGSNFVVGSGSDAAMGVFDFNFRFDMTNEEAFELAERALYYATYS 236
Query: 222 DAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
D +GG VY++ GWKK+S D LH +
Sbjct: 237 DIYTGGFVRVYHITKTGWKKISCTDSVVLHDRF 269
>gi|24584895|ref|NP_724081.1| CG31742 [Drosophila melanogaster]
gi|22953838|gb|AAN11176.1| CG31742 [Drosophila melanogaster]
gi|68051313|gb|AAY84920.1| IP09987p [Drosophila melanogaster]
Length = 279
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 146/232 (62%), Gaps = 1/232 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P AP + P + + ++ + GTTT+ F+++ G+++ DSRA+ G I
Sbjct: 40 PLAIMAPPYENPRES-VKKLNALSEVQIDFDHGTTTVGFVYQGGIILCVDSRATSGKLIG 98
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQS+ K++++N Y++GT AGGAADC +W R L +CRLHEL K R+ V A+K ++N+
Sbjct: 99 SQSIHKVVQVNQYIMGTTAGGAADCTYWDRALTRECRLHELRYKERLPVQSAAKYISNVA 158
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+GMGL +G M+AGW GP L YVDS G R+ G F+VGSG+P A G+LDS Y+ D+
Sbjct: 159 AEYKGMGLCMGMMLAGWSPEGPSLVYVDSNGLRIHGKLFAVGSGAPNALGILDSDYRLDL 218
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
S EA +LA A+YHAT D SGGV +Y++ W+ ++ D ELH Y
Sbjct: 219 SDNEAYDLAFLAVYHATMTDIFSGGVVRLYHMDQGNWRNVANKDCQELHEQY 270
>gi|341876502|gb|EGT32437.1| CBN-PBS-5 protein [Caenorhabditis brenneri]
Length = 284
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/247 (48%), Positives = 160/247 (64%), Gaps = 13/247 (5%)
Query: 21 LCPELSAAPSFS-LPL---STDF--DEFQKDTKATLKHAKGTTTLAFIF-------KEGV 67
+C A +FS LPL DF F + +++ KGTTTLAF++ K G+
Sbjct: 24 MCEPARADFTFSKLPLGIQPVDFMKTHFAETAAKSMQFRKGTTTLAFVYEPATPNDKGGI 83
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRAS G YISS+SV KI++I M+ TMAGGAADCQFW R + C L+EL K
Sbjct: 84 IVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKT 143
Query: 128 RISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGS 187
I+V+ ASK AN+LY YRG GLSVG+M+AG+D+ GP ++ VDSEG R + SVGSGS
Sbjct: 144 SITVSAASKYFANVLYGYRGQGLSVGSMVAGYDKKGPQIFKVDSEGDRCQLKVCSVGSGS 203
Query: 188 PYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDV 247
AYG+LD+ YK M+ EEA +L RAI HAT+RD+ SGGV ++ ++ P +L DV
Sbjct: 204 LNAYGILDNHYKPKMTDEEARQLGLRAIMHATYRDSGSGGVCNLCHITPTEKIRLPPMDV 263
Query: 248 GELHYHY 254
+L + +
Sbjct: 264 SKLWFEF 270
>gi|345488887|ref|XP_003426004.1| PREDICTED: proteasome subunit beta type-5-like, partial [Nasonia
vitripennis]
Length = 225
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 139/185 (75%), Gaps = 2/185 (1%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P S +F L++ DE + K H GTTTL F+++ G++++ DSRA+ G +I
Sbjct: 42 PPFSNPANFLGQLASGTDETGRHLKIQFDH--GTTTLGFMYQGGIVLSVDSRATGGQFIG 99
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ +KKI+EIN Y+LGT+AGGAADC +W R L +CR++EL N+ RIS+ ASKL++N++
Sbjct: 100 SQVMKKIVEINDYLLGTLAGGAADCVYWDRVLAKQCRMYELRNRSRISIAAASKLMSNMV 159
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
Y+Y+GMGLS+G MIAGWD+ GPGLYYVDSEG R G FSVGSGS +AYGVLDSGY++D+
Sbjct: 160 YNYKGMGLSIGMMIAGWDKRGPGLYYVDSEGTRTPGKVFSVGSGSVFAYGVLDSGYRWDL 219
Query: 203 SIEEA 207
+ EEA
Sbjct: 220 TDEEA 224
>gi|403268781|ref|XP_003926445.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 252
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 145/233 (62%), Gaps = 30/233 (12%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFVQSLCGDGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
DCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ------------------------DCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 134
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 135 MCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 194
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI HAT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 195 LSPEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 247
>gi|308470996|ref|XP_003097730.1| CRE-PBS-5 protein [Caenorhabditis remanei]
gi|308239848|gb|EFO83800.1| CRE-PBS-5 protein [Caenorhabditis remanei]
Length = 284
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 153/234 (65%), Gaps = 12/234 (5%)
Query: 33 LPLSTDFDEFQKDTKA-----TLKHAKGTTTLAFIF-------KEGVMVAADSRASMGGY 80
LPL +F K A +++ KGTTTLAF++ K G++VA DSRAS G Y
Sbjct: 37 LPLGIQPVDFMKTHFAETAGKSMQFRKGTTTLAFVYEPATPNDKGGIIVAVDSRASSGEY 96
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
ISS+SV KI++I M+ TMAGGAADCQFW R + C L+EL K I+V+ ASK AN
Sbjct: 97 ISSKSVMKILDIGDRMVATMAGGAADCQFWTRTVAKYCTLYELREKTSITVSAASKYFAN 156
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
+LY YRG GLSVG+M+AG+D+ GP ++ VDSEG R + SVGSGS AYG+LD+ YK
Sbjct: 157 VLYGYRGQGLSVGSMVAGYDKKGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKP 216
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
M+ EEA L RAI HAT+RD+ SGGV ++ ++ P +L DV +L Y +
Sbjct: 217 KMTDEEARNLGLRAIMHATYRDSGSGGVCNLCHITPTEKIRLPPMDVSKLWYEF 270
>gi|429961885|gb|ELA41429.1| hypothetical protein VICG_01534 [Vittaforma corneae ATCC 50505]
Length = 239
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 144/208 (69%), Gaps = 6/208 (2%)
Query: 35 LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINP 94
+S F E Q ++ GTTTLAFIFKEG+++A DSRA+ G YI+SQ+V K+IEIN
Sbjct: 24 ISAKFIEHQ------IQPEHGTTTLAFIFKEGMVIAVDSRATAGSYIASQTVNKVIEINK 77
Query: 95 YMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGT 154
Y+LGTMAGGAADC +W + G+ + +EL N RIS AS L+N +Y Y+G GLS+ T
Sbjct: 78 YLLGTMAGGAADCYYWEKLTGLYAKRYELENGTRISAAAASMFLSNCVYRYKGYGLSMST 137
Query: 155 MIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRA 214
M+ G+D+ GP +Y V +G R+K FSVGSGS A G+L + YK+DM+ EEA L + A
Sbjct: 138 MLCGYDKDGPQIYNVTDQGARIKNHIFSVGSGSTIALGILSARYKYDMTKEEALALGKDA 197
Query: 215 IYHATFRDAASGGVASVYYVGPNGWKKL 242
I++A RDA SGG ++Y++ NGW+K+
Sbjct: 198 IFYAGHRDAYSGGSVNLYFMNHNGWEKI 225
>gi|170595731|ref|XP_001902498.1| Proteasome A-type and B-type family protein [Brugia malayi]
gi|158589802|gb|EDP28656.1| Proteasome A-type and B-type family protein [Brugia malayi]
Length = 277
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 151/234 (64%), Gaps = 8/234 (3%)
Query: 29 PSFSLPLSTDFDEFQKDTKA-TLKHAKGTTTLAFIF-------KEGVMVAADSRASMGGY 80
P + P F K + A L+ KGTTTLAFI+ K G++VA DSRAS G Y
Sbjct: 28 PPYGTPAEFVESHFGKHSGAKNLQFLKGTTTLAFIYEPKTPADKGGIIVAVDSRASAGEY 87
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
ISS+SV KI++I M+ TMAGGAADCQFW R + C L+EL K I+V ASK N
Sbjct: 88 ISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKTEITVAAASKYFQN 147
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
+LYSYR GLSVG+MIAG+D+ GP ++ VDSEG R++ S+GSGS AYG+LD+ Y+
Sbjct: 148 VLYSYRNHGLSVGSMIAGYDKRGPAIFKVDSEGQRIQLRLCSIGSGSLSAYGILDNFYRP 207
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
M+ EEA +L RR I HAT+RD SGGV ++ ++ P + DV +L+Y +
Sbjct: 208 KMTDEEAYKLGRRGIMHATYRDTGSGGVCNMVHISPTEKIRFPAFDVSQLYYEF 261
>gi|268570046|ref|XP_002640679.1| C. briggsae CBR-PBS-5 protein [Caenorhabditis briggsae]
Length = 284
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 154/234 (65%), Gaps = 12/234 (5%)
Query: 33 LPLSTDFDEFQKDTKA-----TLKHAKGTTTLAFIF-------KEGVMVAADSRASMGGY 80
LPL +F K A +++ KGTTTLAF++ K G++VA DSRAS G Y
Sbjct: 37 LPLGIQPVDFMKTHFAETAGKSMQFRKGTTTLAFVYEPATPNDKGGIIVAVDSRASSGEY 96
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
ISS+SV KI++I M+ TMAGGAADCQFW R + C L+EL K I+V+ ASK AN
Sbjct: 97 ISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKNSITVSAASKYFAN 156
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
+LY YRG GLSVG+M+AG+D+ GP ++ VDSEG R + SVGSGS AYG+LD+ YK
Sbjct: 157 VLYGYRGQGLSVGSMVAGYDKKGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKP 216
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
M+ EEA +L RAI HAT+RD+ SGGV ++ ++ P +L DV +L Y +
Sbjct: 217 KMTDEEARKLGLRAIMHATYRDSGSGGVCNLCHITPTEKIRLPPMDVSKLWYEF 270
>gi|18250329|gb|AAL60589.1| proteosome subunit LMP7/PSMB8 [Oncorhynchus mykiss]
Length = 168
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 100/163 (61%), Positives = 123/163 (75%)
Query: 92 INPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLS 151
INPY+LGTM+G AADCQ+W R L +CRL++L NK+RISV+ ASKLL N++ YRGMGLS
Sbjct: 1 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLCNMMLGYRGMGLS 60
Query: 152 VGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELA 211
+G+MI GWD GPGLYYVD RL G FS G GS YAYGV+DSGY DM++EEA EL
Sbjct: 61 MGSMIVGWDNKGPGLYYVDDNATRLSGRMFSTGCGSSYAYGVMDSGYHEDMTVEEAYELG 120
Query: 212 RRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
RR I HAT RDA SGGV ++Y++ +GW K+ +DV EL + Y
Sbjct: 121 RRGITHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRY 163
>gi|55162805|emb|CAH63453.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Canis lupus familiaris]
Length = 252
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 145/235 (61%), Gaps = 34/235 (14%)
Query: 28 APSFSLPLSTDFDEF--------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
AP ++P EF +K+ + + H GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 39 APELAVPRGMQPTEFFQSLGENGEKNIRKEMVH--GTTTLAFKFQHGVIVAVDSRATAGN 96
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI +CQ+W R L +CRL+ L N RISV+ ASKLL+
Sbjct: 97 YI------------------------NCQYWERLLAKECRLYYLRNGERISVSAASKLLS 132
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
N++Y YRGM LS+G+MI GWD+ GPGLYYVD G RL G FS GSGS YAYGV+DSGY+
Sbjct: 133 NMVYQYRGMDLSMGSMICGWDKKGPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQ 192
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA EL RRAI +AT RD+ SGG+ ++Y++ +GW K+ DV EL + Y
Sbjct: 193 PSLSPEEAYELGRRAITYATHRDSYSGGIINMYHMKEDGWVKVESTDVNELLHQY 247
>gi|441594225|ref|XP_004087150.1| PREDICTED: proteasome subunit beta type-8 isoform 3 [Nomascus
leucogenys]
Length = 252
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 145/233 (62%), Gaps = 30/233 (12%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
DCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ------------------------DCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 134
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 135 MCQYRGMGLSIGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 194
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI +AT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 195 LSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 247
>gi|312075453|ref|XP_003140423.1| proteasome A-type and B-type family protein [Loa loa]
gi|307764412|gb|EFO23646.1| proteasome A-type and B-type family protein [Loa loa]
Length = 277
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 154/244 (63%), Gaps = 11/244 (4%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQKDTKA-TLKHAKGTTTLAFIF-------KEGVMVA 70
D+ C P + P+ F K + A + KGTTTLAFI+ K G+++A
Sbjct: 21 DDFC---FMQPPYGTPIEFVESHFGKHSGAKNFQFLKGTTTLAFIYEPKTPADKGGIIIA 77
Query: 71 ADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRIS 130
DSRAS G YISS+SV KI++I M+ TMAGGAADCQFW R + C L+EL K I+
Sbjct: 78 VDSRASAGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKTEIT 137
Query: 131 VTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYA 190
V ASK N+LYSYR GLSVG+MIAG+D+ GP ++ VDSEG R++ S+GSGS A
Sbjct: 138 VAAASKYFQNVLYSYRNHGLSVGSMIAGYDKRGPAIFKVDSEGQRVQLRLCSIGSGSLSA 197
Query: 191 YGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 250
YG+LD+ Y+ M+ +EA +L RR I HAT+RD SGGV ++ ++ P + DV +L
Sbjct: 198 YGILDNFYQPKMTDDEAYKLGRRGIMHATYRDTGSGGVCNMVHISPTEKIRFPPLDVSQL 257
Query: 251 HYHY 254
+Y +
Sbjct: 258 YYEF 261
>gi|308160078|gb|EFO62585.1| Proteasome subunit beta type 5 precursor [Giardia lamblia P15]
Length = 294
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 143/202 (70%), Gaps = 5/202 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+AF F+ G+++A DSR++ G ++SS V+K+IEI P++LGT+AG A DCQFW R+L
Sbjct: 82 GTTTIAFCFRGGILLAVDSRSTQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWERDL 141
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG-PGLYYVDSEG 173
G KCRL+EL N RI + ASKL + L+S G +SVG MI+G+D T P +YY DSEG
Sbjct: 142 GRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDSTNHPCIYYCDSEG 201
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+ G + GSGS +A+G++D+ Y F+M+ E+A L ++AIYHA RDA SGG+ +VY
Sbjct: 202 TRIGGYLYGAGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGMLNVYV 261
Query: 234 VGPNGWKKLSGDDVGELHYHYY 255
+ PNGW+ + D +Y YY
Sbjct: 262 IRPNGWEHVLAMD----NYEYY 279
>gi|402866608|ref|XP_003897471.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Papio anubis]
Length = 252
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 144/233 (61%), Gaps = 30/233 (12%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + + A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGEGNVQIDMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
DCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ------------------------DCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNM 134
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 135 MCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPN 194
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI HAT RD+ SGG+ ++Y++ +GW K+ DV +L + Y
Sbjct: 195 LSPEEAYDLGRRAIAHATHRDSYSGGIVNMYHMKEDGWVKVESTDVSDLLHQY 247
>gi|395745698|ref|XP_003778316.1| PREDICTED: proteasome subunit beta type-11 [Pongo abelii]
Length = 300
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 151/229 (65%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PHLPRAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+I ++ ++LGT +G +ADC W+R L + RL EL + + SV A+KLL+ ++
Sbjct: 77 CPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELRDGQLPSVASAAKLLSAMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SRYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDHGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LAR A+ HAT+RDA SGG +++V +GW+ +S D L+
Sbjct: 197 STQEAYALARCAVAHATYRDAYSGGSVDLFHVRESGWEHVSRSDACVLY 245
>gi|17508499|ref|NP_493558.1| Protein PBS-5 [Caenorhabditis elegans]
gi|3924797|emb|CAB04567.1| Protein PBS-5 [Caenorhabditis elegans]
Length = 284
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 153/234 (65%), Gaps = 12/234 (5%)
Query: 33 LPLSTDFDEFQKDTKA-----TLKHAKGTTTLAFIF-------KEGVMVAADSRASMGGY 80
LPL +F K A +++ KGTTTLAF++ K G++VA DSRAS G Y
Sbjct: 37 LPLGIQPVDFMKTHFAETAGKSMQFRKGTTTLAFVYEPATPADKGGIIVAVDSRASSGEY 96
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
ISS+SV KI++I M+ TMAGGAADCQFW R + C L+EL K I+V+ ASK AN
Sbjct: 97 ISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKTSITVSAASKYFAN 156
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
LY YRG GLSVG+M+AG+D+ GP ++ VDSEG R + SVGSGS AYG+LD+ YK
Sbjct: 157 TLYGYRGQGLSVGSMVAGYDKKGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKP 216
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
M+ +EA +L RAI HAT+RD+ SGGV ++ ++ P +L DV +L Y +
Sbjct: 217 KMTDDEARKLGLRAIMHATYRDSGSGGVCNLCHITPTEKIRLPPMDVSKLWYEF 270
>gi|195396847|ref|XP_002057040.1| GJ16567 [Drosophila virilis]
gi|194146807|gb|EDW62526.1| GJ16567 [Drosophila virilis]
Length = 328
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 151/223 (67%), Gaps = 1/223 (0%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
AP F P K + L+ + GTTTL F ++ G+++ ADSR + G +I+SQ +K
Sbjct: 45 APPFENP-KRKIKRSLKKSNLNLEMSHGTTTLGFKYQGGILLCADSRGTNGEFIASQEMK 103
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
KIIE++ +LGT+AGGAADC +W R L ++CRL EL R ++V A++++ NI Y ++G
Sbjct: 104 KIIEVDKGILGTIAGGAADCVYWDRVLTMECRLFELTYGRSMTVKSAARIMCNIAYKFKG 163
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
+GL +G M+AG+D GP L YVDS+G R++G F++GSG+ A G+LDS Y++DMS EEA
Sbjct: 164 LGLCIGMMLAGYDFDGPQLIYVDSDGQRVEGNLFTIGSGAHCALGILDSFYRWDMSDEEA 223
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 250
LA R +YHAT+ DA +GG+ +Y++ P+ W ++ D EL
Sbjct: 224 YNLALRGVYHATYLDAYTGGLVRLYHMRPHKWSIVTVKDCMEL 266
>gi|440906309|gb|ELR56585.1| Proteasome subunit beta type-11 [Bos grunniens mutus]
Length = 289
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 151/233 (64%), Gaps = 2/233 (0%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
E P L A S+++P D F + L H GTTTLAF F+ GV+ AAD+R+S G
Sbjct: 15 QETSPHLPQAGSWAVPRGWDPQAFLQTHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCG 72
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
Y+ + +K+I ++ ++LGT +G +ADC W+R L + RL L + SV GA+KLL
Sbjct: 73 NYVECPASRKVIPVHQHLLGTTSGTSADCVTWYRVLQRELRLRALREGQLPSVAGAAKLL 132
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
+ ++ YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD GY
Sbjct: 133 SVMMSRYRGLDLCVATALCGWDRSGPALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGY 192
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
++DMS +EA LARRA+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 193 RYDMSTQEAYALARRAVAHATRRDAYSGGSVDLFHVRESGWEYVSRHDAWVLY 245
>gi|291403559|ref|XP_002717947.1| PREDICTED: proteasome beta 11 subunit [Oryctolagus cuniculus]
Length = 303
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 150/231 (64%), Gaps = 2/231 (0%)
Query: 21 LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
L P L S+++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y
Sbjct: 17 LVPHLPRTGSWAVPRGCDPQTFLQTHGPQLAH--GTTTLAFRFRHGVIAAADTRSSCGSY 74
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
++ + +KII ++ ++LGT +G +ADC W+R L + RL L + SV GA+KLL+
Sbjct: 75 VACPASRKIIPVHQHLLGTTSGTSADCVTWYRVLQRELRLRALREGQLPSVAGAAKLLSV 134
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
+L YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD GY++
Sbjct: 135 MLSRYRGLDLCVATALCGWDRSGPALFYVYSDGTWLQGDIFSVGSGSPYAYGVLDRGYRY 194
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
DM I+EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 195 DMGIQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDACVLY 245
>gi|395728693|ref|XP_003775419.1| PREDICTED: proteasome subunit beta type-8 [Pongo abelii]
Length = 252
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 145/233 (62%), Gaps = 30/233 (12%)
Query: 28 APSFSLPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+P +LP EF + + ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 SPELALPRGMQPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
DCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ------------------------DCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 134
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLS+G+MI GWD+ GPGLYYV+ G RL G FS GSG+ YAYGV+DSGY+ +
Sbjct: 135 MCQYRGMGLSMGSMICGWDKKGPGLYYVNEHGTRLSGNMFSTGSGNAYAYGVMDSGYRPN 194
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+S EEA +L RRAI +AT RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 195 LSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 247
>gi|432883660|ref|XP_004074316.1| PREDICTED: proteasome subunit beta type-8-like [Oryzias latipes]
Length = 195
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/166 (59%), Positives = 122/166 (73%)
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
+S V K+IEINPY+LG+M+G AADCQ+W R L + RL+ L N RISV ASKLL N+
Sbjct: 25 TSNDVNKVIEINPYLLGSMSGSAADCQYWERLLAKEYRLYRLRNNHRISVAAASKLLCNM 84
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+ YRGMGLSVG+MI GWD+ GPGLYYVD G RL G FS G G+ YAYGV+DSGYK D
Sbjct: 85 MLGYRGMGLSVGSMICGWDKEGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKED 144
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDV 247
M++EEA EL R I HAT RDA SGG ++Y++ +GW K+ +DV
Sbjct: 145 MTVEEAYELGCRDIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDV 190
>gi|359320114|ref|XP_003639262.1| PREDICTED: proteasome subunit beta type-11-like [Canis lupus
familiaris]
Length = 282
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 153/231 (66%), Gaps = 2/231 (0%)
Query: 21 LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
L P L A +S+PL D F + L H GTTTLAF F+ GV+ AAD+R+S G Y
Sbjct: 17 LSPHLPPAGGWSVPLGCDPQTFLRLHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGNY 74
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
++ + +KII ++ ++LGT +G +ADC W+R L + RL L R SV GA++LL+
Sbjct: 75 VACPASRKIIPVHQHLLGTTSGTSADCAAWYRVLRRELRLRALREGRLPSVAGAARLLSA 134
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++ YRG+ L V T + GWD +GP L+YV S+G RL G FSVGSGSPYAYGVLD GY++
Sbjct: 135 MMSCYRGLDLCVATALCGWDRSGPALFYVCSDGTRLPGNVFSVGSGSPYAYGVLDRGYRY 194
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
D+S +EA LARRA+ HAT RDA SGG +++V +GW+ +S DD L+
Sbjct: 195 DLSPQEAYALARRAVAHATHRDAYSGGSVDLFHVREDGWEYVSRDDACVLY 245
>gi|357606699|gb|EHJ65175.1| proteasome subunit beta 5 [Danaus plexippus]
Length = 228
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 136/186 (73%), Gaps = 7/186 (3%)
Query: 27 AAPSFSLPLST--DF---DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
A P F+ P+ T F DE + K H GTTTL F +K GV++A DSRA+ G +I
Sbjct: 42 ALPPFANPVETLAQFNTKDETGRQIKIEFDH--GTTTLGFRYKGGVLLAVDSRATGGQFI 99
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
SQS+KKI+EIN Y+LGT+AGGAADC +W R L +CRL+EL N+ RISV ASKL+AN+
Sbjct: 100 GSQSMKKIVEINDYLLGTLAGGAADCVYWDRVLAKQCRLYELRNRERISVAAASKLMANM 159
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
+Y+Y+GMGLS+G M+AG D+ G LYYVDSEG R G FSVGSGS YA+GVLDSGY++D
Sbjct: 160 VYNYKGMGLSMGMMLAGIDKRGAQLYYVDSEGTRTPGKVFSVGSGSVYAFGVLDSGYRWD 219
Query: 202 MSIEEA 207
+ EEA
Sbjct: 220 LEDEEA 225
>gi|395859281|ref|XP_003801968.1| PREDICTED: proteasome subunit beta type-11 [Otolemur garnettii]
Length = 300
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 156/250 (62%), Gaps = 2/250 (0%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
L P L + +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G
Sbjct: 15 QRLSPHLPQSAGWAMPRGCDPQAFLQMRGPRLAH--GTTTLAFRFQHGVIAAADTRSSCG 72
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
Y++ + K+I ++ ++LGT +G +ADC W+R L + RL L + SV A+KLL
Sbjct: 73 SYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRALREGQLPSVASAAKLL 132
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
+ ++ YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY
Sbjct: 133 SAMMSRYRGLDLCVATALCGWDCSGPALFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGY 192
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 258
++DM+ +EA LAR A+ HAT RDA SGG +++V +GW+ +S +D L+ +
Sbjct: 193 RYDMTTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRNDACVLYKELQELR 252
Query: 259 PSTVEQEMAE 268
+E+E +
Sbjct: 253 EPALEEEACQ 262
>gi|397617693|gb|EJK64564.1| hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]
Length = 1534
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 151/223 (67%), Gaps = 2/223 (0%)
Query: 28 APSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87
+P SL D + T ++ A GTTTL+F+F+ GV+ A DSRAS+G ++ S++V+
Sbjct: 1306 SPLPSLIEHESHDVTRTPTTPPIEFAHGTTTLSFVFQGGVIAAVDSRASIGNFVGSKTVQ 1365
Query: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
K++ ++ +LGTMAGGAADC FW R L + RLHE+ NKR +SV +S++L+N LY YRG
Sbjct: 1366 KVLPVSSSILGTMAGGAADCSFWIRFLRQQARLHEVQNKRSMSVARSSRILSNALYQYRG 1425
Query: 148 MG-LSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
+G LSVG+MI G+D G +YYVD+ G R++G FSVGSGS +A G+LD+ ++DM+
Sbjct: 1426 LGDLSVGSMIMGYDAREGFSIYYVDNTGARIRGEVFSVGSGSTFALGILDTELRYDMTEA 1485
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVG 248
EA L +AI HAT RDA SGG VY + GW K+ +D+
Sbjct: 1486 EAISLGIKAIRHATARDAMSGGYIGVYLITKEGWAKVYSEDLA 1528
>gi|197129147|gb|ACH45645.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 270
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 130/179 (72%), Gaps = 1/179 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L+ GTTTLAF GV VA DSRA+ G YI+SQSV+K++ I MLGTMAGGAADC F
Sbjct: 71 LQILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIGGRMLGTMAGGAADCAF 130
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W R + +CR+ EL NK +SV ASKLLAN++Y Y+G+GLS+GTM+ GWD+ GPGLYYV
Sbjct: 131 WQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYV 190
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGY-KFDMSIEEAAELARRAIYHATFRDAASGG 227
DSEG R+ G F+VGSGS YAYGVLD G S E A ELARRAI A RDA SGG
Sbjct: 191 DSEGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGG 249
>gi|253745395|gb|EET01350.1| Proteasome subunit beta type 5 precursor [Giardia intestinalis ATCC
50581]
Length = 294
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 143/202 (70%), Gaps = 5/202 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+AF F+ G+++A DSR++ G ++SS V+K+IEI P++LGT+AG A DCQFW R+L
Sbjct: 82 GTTTVAFCFRGGILLAVDSRSTQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWERDL 141
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG-PGLYYVDSEG 173
G KCRL+EL N RI + ASKL + L+S G +SVG MI+G+D T P +YY DSEG
Sbjct: 142 GRKCRLYELENGERIYASSASKLFISTLHSQSGTDMSVGAMISGFDSTNHPCIYYCDSEG 201
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+ G + GSGS +A+G++D+ Y F+M+ E+A L ++AIYHA RDA SGG+ ++Y
Sbjct: 202 TRIGGYLYGAGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGMLNIYV 261
Query: 234 VGPNGWKKLSGDDVGELHYHYY 255
+ P+GW+ + D +Y YY
Sbjct: 262 IRPSGWEHVLAMD----NYEYY 279
>gi|159109800|ref|XP_001705163.1| Proteasome subunit beta type 5 precursor [Giardia lamblia ATCC
50803]
gi|157433243|gb|EDO77489.1| Proteasome subunit beta type 5 precursor [Giardia lamblia ATCC
50803]
Length = 294
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 142/202 (70%), Gaps = 5/202 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+AF F+ G+++A DSR++ G ++SS V+K+IEI P++LGT+AG A DCQFW R+L
Sbjct: 82 GTTTIAFCFRGGILLAVDSRSTQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWERDL 141
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG-PGLYYVDSEG 173
G KCRL+EL N RI + ASKL + L+S G +SVG MI+G+D T P +YY DSEG
Sbjct: 142 GRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDSTNHPCIYYCDSEG 201
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
R+ G + GSGS +A+G++D+ Y F+M+ E+A L ++AIYHA RDA SGG+ +VY
Sbjct: 202 TRIGGYLYGAGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGMLNVYV 261
Query: 234 VGPNGWKKLSGDDVGELHYHYY 255
+ P GW+ + D +Y YY
Sbjct: 262 IRPGGWEHVLAMD----NYEYY 279
>gi|150247151|ref|NP_001092856.1| proteasome subunit beta type-11 [Bos taurus]
gi|148877297|gb|AAI46055.1| PSMB11 protein [Bos taurus]
gi|296483653|tpg|DAA25768.1| TPA: proteasome beta 11 subunit [Bos taurus]
Length = 289
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 150/233 (64%), Gaps = 2/233 (0%)
Query: 19 DELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMG 78
E P L A S+++P D F + L H GTTTLAF F+ GV+ AAD+R+S G
Sbjct: 15 QETSPHLPQAGSWAVPRGWDPQAFLQTHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCG 72
Query: 79 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 138
Y+ + +K+I ++ ++LGT +G +ADC W+R L + RL L + SV GA+KLL
Sbjct: 73 NYVECPASRKVIPVHQHLLGTTSGTSADCVTWYRVLQRELRLRALREGQLPSVAGAAKLL 132
Query: 139 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
+ ++ YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD GY
Sbjct: 133 SVMMSRYRGLDLCVATALCGWDRSGPALFYVYSDGTCLQGNIFSVGSGSPYAYGVLDRGY 192
Query: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
++DMS +EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 193 RYDMSTQEAYALARCAVAHATRRDAYSGGSVDLFHVRESGWEYVSRHDAWVLY 245
>gi|52547780|gb|AAU81925.1| low molecular mass protein 7, partial [Marmota monax]
Length = 156
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 121/156 (77%)
Query: 67 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 126
V+VA DSRAS G YI++ + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N
Sbjct: 1 VIVAVDSRASAGSYIATLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNG 60
Query: 127 RRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSG 186
RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG
Sbjct: 61 ERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDHNGTRLSGCMFSTGSG 120
Query: 187 SPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
+ YAYGV+DSGY ++S EEA +L RRAI HAT RD
Sbjct: 121 NSYAYGVMDSGYLPNLSPEEAYDLGRRAIVHATHRD 156
>gi|194758868|ref|XP_001961680.1| GF14807 [Drosophila ananassae]
gi|190615377|gb|EDV30901.1| GF14807 [Drosophila ananassae]
Length = 308
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 148/230 (64%), Gaps = 3/230 (1%)
Query: 23 PELSAAPSFSLPLST-DFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
P + AP F P T + + + K H GTTTL FI++ G+++ DSRA+ G YI
Sbjct: 40 PLMLMAPPFDKPKETLKYLADKGNVKMDFHH--GTTTLGFIYQGGIVLCVDSRATAGAYI 97
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
S +KK++ I+ YML T+AGGAADC +W R L + RL+EL +K R+ V A++ LANI
Sbjct: 98 GSHGMKKVVPISDYMLSTIAGGAADCSYWDRVLTREVRLYELRHKERMPVKSAARFLANI 157
Query: 142 LYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFD 201
Y YRGMGLS+ ++AGW + GP L YVD++G + G FS GSG A G+LD+ Y++
Sbjct: 158 AYQYRGMGLSMSIILAGWSDEGPSLVYVDADGLSVPGKLFSAGSGGECALGLLDTEYRYK 217
Query: 202 MSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
MS E+A +LA R+IYHA+ RD +GGV S Y++ GW+ ++ D EL
Sbjct: 218 MSDEKAFDLAFRSIYHASSRDVYTGGVVSCYHLDKKGWRLVAAKDSEELR 267
>gi|194207140|ref|XP_001918357.1| PREDICTED: proteasome subunit beta type-11-like [Equus caballus]
Length = 299
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 150/231 (64%), Gaps = 2/231 (0%)
Query: 21 LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
L P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y
Sbjct: 17 LSPHLPQAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGNY 74
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
++ + +K+I ++ ++L T +G +ADC W+R L + RL L + SV A+KLL+
Sbjct: 75 VACPASRKVIPVHQHLLSTTSGTSADCATWYRVLQRELRLRALREGQLPSVASAAKLLSA 134
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++ YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++
Sbjct: 135 MMSHYRGLDLCVATALCGWDRSGPALFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRY 194
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
DM+ +EA LAR A+ HAT RDA SGG +++V +GW+ +S +D L+
Sbjct: 195 DMTTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRNDAWVLY 245
>gi|269860673|ref|XP_002650056.1| 20S proteasome core particle subunit beta 5 [Enterocytozoon
bieneusi H348]
gi|220066543|gb|EED44021.1| 20S proteasome core particle subunit beta 5 [Enterocytozoon
bieneusi H348]
Length = 233
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 142/205 (69%), Gaps = 1/205 (0%)
Query: 47 KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD 106
+ ++ GTTTLAF+FKEG+++A DSRA+ G YI+SQ+V K+IEIN Y+LGTMAG AAD
Sbjct: 26 RNVIQPVHGTTTLAFVFKEGMIIAVDSRATAGSYIASQTVNKVIEINKYLLGTMAGCAAD 85
Query: 107 CQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGL 166
C +W + +G + +E+ ++I+ + AS L+N + Y+G G+S+GTM+ G+D+ P +
Sbjct: 86 CLYWEKKMGFYAKEYEIKTGKKITASQASYYLSNCINKYKGYGMSMGTMVCGYDKE-PKI 144
Query: 167 YYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
Y VD +G R++ FSVGSGS AYGVL S Y +D++ EEA +L + AIY A RDA SG
Sbjct: 145 YMVDDQGRRIENNIFSVGSGSTIAYGVLSSRYSYDLTKEEAIQLGKDAIYAAGHRDAYSG 204
Query: 227 GVASVYYVGPNGWKKLSGDDVGELH 251
G +VY++ NGW K+ D ++
Sbjct: 205 GTVNVYFMDHNGWSKIGRWDFNQIQ 229
>gi|431907187|gb|ELK11253.1| Proteasome subunit beta type-11 [Pteropus alecto]
Length = 299
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 149/232 (64%), Gaps = 2/232 (0%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
EL P L + +++P D F + L H GTTTLAF F+ GV+ AAD+R+S
Sbjct: 16 ELLPHLPQSGGWAVPRGCDPQTFLQTHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCDN 73
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
Y+ + KII ++ ++LGT +G +ADC W+R L + RL L + SV GA+KLL+
Sbjct: 74 YVECPASCKIIPVHQHLLGTTSGTSADCATWYRVLQRELRLRALREGQLPSVAGAAKLLS 133
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
++ YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY+
Sbjct: 134 AMMSRYRGLDLCVATALCGWDCSGPALFYVYSDGTRLEGNIFSVGSGSPYAYGVLDRGYR 193
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
+DM+ +EA LAR A+ HAT RD SGG +++V +GW+ +S +D L+
Sbjct: 194 YDMTTQEAYTLARCAVAHATHRDGYSGGSVDLFHVRESGWEYVSRNDAWVLY 245
>gi|299115128|emb|CBN75495.1| 20S proteasome beta 5 subunit [Ectocarpus siliculosus]
Length = 264
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 151/233 (64%), Gaps = 17/233 (7%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
LK + GTTT+A + GV+ A DSRASMG ++ S++ +K+I ++ ++LGTMAGGAADC F
Sbjct: 30 LKLSHGTTTVALVCDGGVIAAVDSRASMGSFVGSRTTQKVIPVSQHILGTMAGGAADCTF 89
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD--------- 160
W R LG++ ++ E N ++ V A+++LA+ L RG GLSVGTMI G D
Sbjct: 90 WLRYLGMQAKVFEDRNGFQMPVATAARVLADALLGQRGKGLSVGTMIMGHDRGNRDSSGR 149
Query: 161 -------ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARR 213
+ G L+YVDS+G R+KG FSVGSGS YAY VLD GY+ MS+EEAA+LA+R
Sbjct: 150 GSVSGGNQGGGQLFYVDSDGARVKGRYFSVGSGSTYAYSVLDEGYRDGMSLEEAADLAKR 209
Query: 214 AIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY-HYYPVTPSTVEQE 265
A+ HAT+RDA SGG +V+ V +GW +L DD G L TP + +E
Sbjct: 210 AVRHATYRDAFSGGFINVFVVDASGWTRLDVDDSGFLDLTQPSDATPDPIGRE 262
>gi|351697093|gb|EHB00012.1| Proteasome subunit beta type-11 [Heterocephalus glaber]
Length = 300
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/226 (46%), Positives = 145/226 (64%), Gaps = 2/226 (0%)
Query: 21 LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
L P L A + +P D F L H GTTTLAF F+ GV+ AAD+R+S G Y
Sbjct: 17 LSPRLPQAGGWVVPRGCDPQSFLWIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGRY 74
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
++ + K+I ++ ++LGT +G +ADC W+R L + RL L + SV A+KLL+
Sbjct: 75 VACPTSLKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRALREGQLPSVASAAKLLSA 134
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++ YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY +
Sbjct: 135 MMSRYRGLDLCVATALCGWDRSGPALFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYHY 194
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD 246
DM+I+EA LAR A+ HAT RDA SGG +++V +GW+ +S D
Sbjct: 195 DMTIQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSD 240
>gi|223993127|ref|XP_002286247.1| probable 20S proteasome beta subunit [Thalassiosira pseudonana
CCMP1335]
gi|220977562|gb|EED95888.1| probable 20S proteasome beta subunit [Thalassiosira pseudonana
CCMP1335]
Length = 220
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 146/204 (71%), Gaps = 2/204 (0%)
Query: 49 TLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 108
+++ A GTTTL+F+F+ G++VA DSRAS+G ++ S++ +K++ ++ +LG+MAGGAADC
Sbjct: 11 SIEFAHGTTTLSFVFQGGIVVAVDSRASIGNFVGSKTTQKVLPVSRNILGSMAGGAADCS 70
Query: 109 FWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLY 167
FW R L + ++HEL + + ISV AS++L+NILY RGM LSVGTMI G+ G +Y
Sbjct: 71 FWIRYLRSEAKIHELYDGKGISVARASRVLSNILYQNRGMDLSVGTMIMGYHSRDGFSIY 130
Query: 168 YVDSEGGRLKGTRFSVGSGSPYAYGVLDS-GYKFDMSIEEAAELARRAIYHATFRDAASG 226
YVD+ G R+KG FSVGSGS +A G+LD+ +FDM+ EEA L +AI HAT RDA SG
Sbjct: 131 YVDNTGVRIKGDMFSVGSGSTFALGILDTEENRFDMTEEEAVALGIKAIRHATLRDAMSG 190
Query: 227 GVASVYYVGPNGWKKLSGDDVGEL 250
G VY + +GW+K+ +D+ +
Sbjct: 191 GYIGVYLITKDGWRKVFSEDLASV 214
>gi|634095|emb|CAA58746.1| D13094 [Schizosaccharomyces pombe]
Length = 147
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 119/144 (82%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF ++ G++V DSRAS G I+SQ+VKK+IEINPY+LGT+AGGAADCQFW L
Sbjct: 4 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVL 63
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
G++CRLH+L NK ISV+ ASK+L+NI YSY+G GLS+GTM+AG + G LYY+DS+G
Sbjct: 64 GMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSDGT 123
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGY 198
RLKG FSVGSGS +AYGVLDSGY
Sbjct: 124 RLKGDLFSVGSGSTFAYGVLDSGY 147
>gi|410962086|ref|XP_003987606.1| PREDICTED: proteasome subunit beta type-11 [Felis catus]
Length = 284
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 156/245 (63%), Gaps = 2/245 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L ++++P D F + L H GTTTLAF+F+ GV+ AAD+R+S G Y+
Sbjct: 19 PHLPQPGAWAVPPGCDPQTFLQIHGPRLAH--GTTTLAFLFRHGVIAAADTRSSCGNYVE 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ +KII ++ ++LGT +G +ADC W+R L + RL L + SV GA+KLL+ ++
Sbjct: 77 CPTSRKIIPVHQHLLGTTSGTSADCAVWYRVLRRELRLRALREGQLPSVAGAAKLLSTMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SCYRGLDLCVATALCGWDRSGPALFYVYSDGTRLQGNIFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTV 262
+ +EA LAR A+ HAT RDA SGG +++V +GW+ +S +D L+ +
Sbjct: 197 TPQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRNDACVLYSELQKLPEPDK 256
Query: 263 EQEMA 267
E+E A
Sbjct: 257 EEEEA 261
>gi|390986499|gb|AFM35769.1| hypothetical protein, partial [Oryza eichingeri]
Length = 117
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/115 (82%), Positives = 103/115 (89%)
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
+CRLHELANKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYYVDSEG R
Sbjct: 3 FQCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSEGAR 62
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVAS 230
L G+RFSVGSGS YAYG+LD GY++ MS+EEAAELARRAIY ATFRD ASGG S
Sbjct: 63 LMGSRFSVGSGSLYAYGILDEGYRYVMSVEEAAELARRAIYQATFRDGASGGCVS 117
>gi|149627583|ref|XP_001519245.1| PREDICTED: proteasome subunit beta type-11-like [Ornithorhynchus
anatinus]
Length = 295
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 143/221 (64%), Gaps = 2/221 (0%)
Query: 31 FSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKII 90
+++P D F L H GTTTLAF F+ GV+ AAD+R+S G Y++ + K+I
Sbjct: 26 WAVPPGWDPSSFLGTPGLDLAH--GTTTLAFRFRHGVIAAADTRSSCGQYVACPASLKVI 83
Query: 91 EINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGL 150
++ ++LGT +G +ADC W R L + RL L R SV GA++LLA +L+ Y+G+ L
Sbjct: 84 PVHRHLLGTTSGTSADCAAWFRVLQRELRLRALREGRLPSVAGAARLLAGMLHRYQGLDL 143
Query: 151 SVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAEL 210
V T++ GWD +GP L+YV S+G L GT FSVGSGSPYAYGVLD GY++DM EA L
Sbjct: 144 CVATVLCGWDRSGPALFYVYSDGTLLPGTVFSVGSGSPYAYGVLDRGYRYDMEPHEAYAL 203
Query: 211 ARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
AR+A+ HA RDA SGG +Y+V +GW+ +S D L+
Sbjct: 204 ARQAVAHAARRDAYSGGSVDLYHVRESGWEHVSRQDACVLY 244
>gi|444728808|gb|ELW69250.1| Proteasome subunit beta type-11 [Tupaia chinensis]
Length = 295
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 152/248 (61%), Gaps = 7/248 (2%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F GV+ AAD G Y++
Sbjct: 19 PHLPQAGGWAVPRGCDPQAFLQSHGPRLAH--GTTTLAFRFCHGVIAAAD----CGSYVA 72
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ +K+I ++ ++LGT +G +ADC W+R L + RL L + SV A+KLL+ ++
Sbjct: 73 CPASRKVIPVHRHLLGTTSGTSADCATWYRVLQRELRLRALREGQLPSVASAAKLLSAMM 132
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 133 SRYRGLDLCVATALCGWDRSGPALFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDM 192
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTV 262
+ +EA LARRA+ HAT RDA SGG +++V +GW+ +S D L+ + P
Sbjct: 193 TTQEAYALARRAVAHATHRDAYSGGSVDLFHVRESGWEYVSRGDACVLYAELRKL-PEPE 251
Query: 263 EQEMAEVA 270
+QE A A
Sbjct: 252 QQEEASQA 259
>gi|348577161|ref|XP_003474353.1| PREDICTED: proteasome subunit beta type-11-like [Cavia porcellus]
Length = 297
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 152/231 (65%), Gaps = 2/231 (0%)
Query: 21 LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
L P LS A S+++P D + F + L H GTTTLAF F+ GV+ AAD+R+S G Y
Sbjct: 17 LSPHLSQAGSWTVPRGCDPESFLRIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSY 74
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLAN 140
++ + K+I ++ ++LGT +G +ADC W+R L + RL L + SV GA+KLL+
Sbjct: 75 VACPASLKVIPVHQHLLGTTSGTSADCVTWYRVLRRELRLRALREGQMPSVAGAAKLLST 134
Query: 141 ILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
++ YRG+ L V T + GWD +GP L+YV S+G +G FSVGSGSPYAYGVLD GY++
Sbjct: 135 MMSRYRGLDLCVATALCGWDCSGPALFYVYSDGTCFQGDIFSVGSGSPYAYGVLDHGYRY 194
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
DM+ +EA LARRA+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 195 DMTTQEAYTLARRAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDACVLY 245
>gi|239788842|dbj|BAH71082.1| ACYPI000065 [Acyrthosiphon pisum]
Length = 216
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
Query: 25 LSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
L P ++ + T D + + H GTTTL F+++ G+++A DSRA+ G YI SQ
Sbjct: 44 LPGNPVENMRMITARDTMGRPIELNFHH--GTTTLGFLYQGGIVLAVDSRATGGQYIGSQ 101
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISVT ASK+++N++Y
Sbjct: 102 CMKKIVEINDFMLGTLAGGAADCVYWDRVLSKQCRLHELRNKERISVTAASKIMSNMIYY 161
Query: 145 YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
Y+G GLS+G M+AG+D+ GP L+Y+D++G R G FSVGSGS YA+GVLDSGYK
Sbjct: 162 YKGYGLSIGMMLAGYDKNGPSLFYIDNDGSRTPGKVFSVGSGSIYAFGVLDSGYK 216
>gi|388454400|ref|NP_001253615.1| proteasome subunit beta type-11 [Macaca mulatta]
gi|355693140|gb|EHH27743.1| hypothetical protein EGK_18014 [Macaca mulatta]
gi|355778437|gb|EHH63473.1| hypothetical protein EGM_16446 [Macaca fascicularis]
gi|383415721|gb|AFH31074.1| proteasome subunit beta type-11 precursor [Macaca mulatta]
Length = 300
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PHLPQAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++
Sbjct: 77 CPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SRYRGLDLCVATALCGWDRSGPMLFYVYSDGTRLQGNIFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 197 STQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLY 245
>gi|426376399|ref|XP_004054988.1| PREDICTED: proteasome subunit beta type-11 [Gorilla gorilla
gorilla]
Length = 300
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PHLPRAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++
Sbjct: 77 CPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 197 STQEAYALARCAVAHATHRDAYSGGSVDLFHVQESGWEHVSRSDACVLY 245
>gi|153791216|ref|NP_001093250.1| proteasome subunit beta type-11 precursor [Homo sapiens]
gi|158513330|sp|A5LHX3.1|PSB11_HUMAN RecName: Full=Proteasome subunit beta type-11; AltName:
Full=Proteasome subunit beta-5t; Flags: Precursor
gi|148537365|dbj|BAF63540.1| proteasome subunit beta5t [Homo sapiens]
gi|307686397|dbj|BAJ21129.1| proteasome (prosome, macropain) subunit, beta type, 11 [synthetic
construct]
Length = 300
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PHLPRAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++
Sbjct: 77 CPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 197 STQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLY 245
>gi|193783753|dbj|BAG53735.1| unnamed protein product [Homo sapiens]
Length = 300
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PHLPRAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++
Sbjct: 77 CPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 197 STQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLY 245
>gi|332841886|ref|XP_522799.2| PREDICTED: proteasome subunit beta type-11 [Pan troglodytes]
gi|397473331|ref|XP_003808168.1| PREDICTED: proteasome subunit beta type-11 [Pan paniscus]
Length = 300
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PHLPRAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++
Sbjct: 77 CPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 197 STQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLY 245
>gi|443731714|gb|ELU16739.1| hypothetical protein CAPTEDRAFT_41193, partial [Capitella teleta]
Length = 131
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 110/130 (84%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF FK GV+VA DSRA+ G +I+SQ+VKK+IEINPY+LGTMAGGAADCQ+W R +
Sbjct: 2 GTTTLAFKFKHGVIVAVDSRATAGDWIASQTVKKVIEINPYLLGTMAGGAADCQYWERVV 61
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+CR++EL NK RISV ASKLLANI+Y+Y+GMGLS+GTMI GWD+ GPGLYYVDS+G
Sbjct: 62 ARQCRIYELRNKERISVAAASKLLANIVYNYKGMGLSMGTMICGWDKKGPGLYYVDSDGT 121
Query: 175 RLKGTRFSVG 184
R+ FSVG
Sbjct: 122 RMTNAMFSVG 131
>gi|301781286|ref|XP_002926066.1| PREDICTED: proteasome subunit beta type-11-like [Ailuropoda
melanoleuca]
Length = 291
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y+
Sbjct: 19 PHLPRAGGWAVPPGWDPGTFVRSHGPGLAH--GTTTLAFRFRHGVIAAADTRSSCGNYVQ 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ +KII ++ ++LGT +G +ADC W+R L + RL L + SV GA++LL+ +L
Sbjct: 77 CPASRKIIPVHQHLLGTTSGTSADCATWYRVLRRELRLRALREGQPPSVAGAARLLSAML 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SRYRGLDLCVATALCGWDRSGPALFYVYSDGTRLPGNVFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LAR A+ HAT RDA SGG +++V +GW+ +S +D L+
Sbjct: 197 SPQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRNDACVLY 245
>gi|402875684|ref|XP_003901627.1| PREDICTED: proteasome subunit beta type-11 [Papio anubis]
Length = 300
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PHLPRAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++
Sbjct: 77 CPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SRYRGLDLCVATALCGWDRSGPMLFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 197 STQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLY 245
>gi|134078851|emb|CAK45910.1| unnamed protein product [Aspergillus niger]
Length = 379
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/256 (44%), Positives = 156/256 (60%), Gaps = 25/256 (9%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAAD 72
E P LS F+LP + F + + +K A GTTTLAF F+ G++VA D
Sbjct: 110 ESLPPLSL--KFNLPPVDNSRAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATD 167
Query: 73 SRASMGGYISSQSVKKII--------------EINPYMLGTMAGGAADCQFWHRNLGIKC 118
SRA+ G +I+SQ+VKK+I E P +LGTMAGGAA C +
Sbjct: 168 SRATAGNWIASQTVKKVIPVSRLSRGEDKPSNEPTPGLLGTMAGGAAVCAILVEQFMLCA 227
Query: 119 RLH-ELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRL 176
R+ ++ +KRRI+V ASK+LAN+ Y+Y+GMGLS+GTM+AG + GP LYY+DS+G RL
Sbjct: 228 RIMGQIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMTPQEGPALYYIDSDGTRL 287
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
G F VGSG +AYGVLD+ Y++D++ EEA EL RR+I A RDA SGG ++Y+V
Sbjct: 288 PGNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKE 347
Query: 237 NGWKKLSGDDVGELHY 252
GW +D+ + +
Sbjct: 348 EGWVHHGFNDMNPIFW 363
>gi|194038909|ref|XP_001925798.1| PREDICTED: proteasome subunit beta type-11-like [Sus scrofa]
Length = 291
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 152/229 (66%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A ++++P D F + L H GTTTLAF F++GV+ AAD+R+S G Y+
Sbjct: 19 PYLPQAGAWAVPRGWDPQTFLQTHGPRLAH--GTTTLAFRFRDGVIAAADTRSSCGNYVE 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ +K+I ++ ++LGT +G +ADC W+R L + RL EL + SV GA+KLL+ ++
Sbjct: 77 CPASRKVIPVHQHLLGTTSGTSADCTTWYRVLRRELRLRELREGQLPSVAGAAKLLSGMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SRYRGLDLCVATALCGWDRSGPALFYVYSDGTLLQGDIFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LA RA+ HAT RDA SGG +++V +GW+ +S +D L+
Sbjct: 197 STQEAYALACRAVAHATHRDAYSGGSVDLFHVRESGWEHVSRNDAWVLY 245
>gi|281343379|gb|EFB18963.1| hypothetical protein PANDA_015662 [Ailuropoda melanoleuca]
Length = 256
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y+
Sbjct: 19 PHLPRAGGWAVPPGWDPGTFVRSHGPGLAH--GTTTLAFRFRHGVIAAADTRSSCGNYVQ 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ +KII ++ ++LGT +G +ADC W+R L + RL L + SV GA++LL+ +L
Sbjct: 77 CPASRKIIPVHQHLLGTTSGTSADCATWYRVLRRELRLRALREGQPPSVAGAARLLSAML 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SRYRGLDLCVATALCGWDRSGPALFYVYSDGTRLPGNVFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LAR A+ HAT RDA SGG +++V +GW+ +S +D L+
Sbjct: 197 SPQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRNDACVLY 245
>gi|403264180|ref|XP_003924369.1| PREDICTED: proteasome subunit beta type-11 [Saimiri boliviensis
boliviensis]
Length = 304
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 148/229 (64%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A + +P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PHLPQAGGWLVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++
Sbjct: 77 CPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY +DM
Sbjct: 137 SRYRGLDLCVATALCGWDRSGPTLFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYHYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
+ +EA LAR A+ HAT RDA SGG +++V +GW+ +S +D L+
Sbjct: 197 TTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRNDACVLY 245
>gi|354488003|ref|XP_003506160.1| PREDICTED: proteasome subunit beta type-11-like [Cricetulus
griseus]
gi|344242610|gb|EGV98713.1| Proteasome subunit beta type-11 [Cricetulus griseus]
Length = 305
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 146/224 (65%), Gaps = 2/224 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PHLPEAGGWAVPRGCDPQAFLRIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ +K+I ++ ++LGT +G +ADC W+R L + RL EL + SV G +KLL+ +L
Sbjct: 77 CPASRKVIPVHQHLLGTTSGTSADCVTWYRVLQRELRLRELREGQLPSVAGTAKLLSAML 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD Y++DM
Sbjct: 137 SRYRGLDLCVATALCGWDHSGPALFYVYSDGTCLRGDIFSVGSGSPYAYGVLDRSYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD 246
+++EA LAR A+ HAT RDA SGG +++V GW+ +S D
Sbjct: 197 TVQEAYALARCAVTHATHRDAYSGGSVDLFHVRETGWEYVSRSD 240
>gi|429858330|gb|ELA33155.1| proteasome component pre2 [Colletotrichum gloeosporioides Nara gc5]
Length = 267
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 145/227 (63%), Gaps = 23/227 (10%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
A PS L +TD D D +K A GTTTLAF F+ G++VA DSRA G +I+SQ+V
Sbjct: 46 AHPSSWLRAATD-DRANPD--CPIKIAHGTTTLAFRFQGGIIVATDSRAPAGNWIASQTV 102
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEIN +LGTMAGG R L RRISV ASK+LAN++YSY+
Sbjct: 103 KKVIEINSVLLGTMAGG--------RRL-----------PRRISVAAASKILANLVYSYK 143
Query: 147 GMGLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
GMGLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLD+ Y++D++ +
Sbjct: 144 GMGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDQ 203
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
EA EL R+I AT RDA SGG ++Y+V GW K +D + +
Sbjct: 204 EALELGSRSILAATHRDAYSGGFINLYHVKEEGWVKHGFNDTNPIFW 250
>gi|297844204|ref|XP_002889983.1| hypothetical protein ARALYDRAFT_888660 [Arabidopsis lyrata subsp.
lyrata]
gi|297335825|gb|EFH66242.1| hypothetical protein ARALYDRAFT_888660 [Arabidopsis lyrata subsp.
lyrata]
Length = 132
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/104 (89%), Positives = 97/104 (93%)
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLH LANKR
Sbjct: 1 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHALANKR 60
Query: 128 RISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDS 171
RISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDET ++ S
Sbjct: 61 RISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETVSKTNFISS 104
>gi|47210559|emb|CAF96424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 224
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 148/239 (61%), Gaps = 18/239 (7%)
Query: 9 ESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVM 68
+S PF L L+++PS LP + GTTTLAFIF+ GV+
Sbjct: 3 DSVGPFLSLPSAL--PLASSPSVPLPFPM---------------SHGTTTLAFIFQGGVL 45
Query: 69 VAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRR 128
AAD+R+S G ++ + +KI+ I+ +++GT +G +ADC W R L + RL++L + RR
Sbjct: 46 AAADTRSSCSGLVACPASQKIVPIHSHLVGTTSGTSADCVLWKRILARELRLYQLRHGRR 105
Query: 129 ISVTGASKLLANILYSYRGMGLSVGTMIAGWDE-TGPGLYYVDSEGGRLKGTRFSVGSGS 187
+S GA+KLL+++L+ ++G L V + GWD +GP L+YV S+G RL GT FSVGSGS
Sbjct: 106 LSTRGAAKLLSHMLHPFKGTDLCVAATLCGWDGFSGPSLHYVCSDGTRLPGTLFSVGSGS 165
Query: 188 PYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD 246
PYAY +LD G ++++S+EEA +AR A++ AT RDA SG +Y + GW + +D
Sbjct: 166 PYAYSILDQGVEWNLSVEEATSVAREAVFRATHRDAYSGNNVDIYLISSKGWTRRRRED 224
>gi|219125785|ref|XP_002183153.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405428|gb|EEC45371.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 197
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 140/197 (71%), Gaps = 7/197 (3%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L+ A GTTTL+F+F+ G++ A DSRAS+G ++ S++ +K++ IN +MLGTMAGGAADC F
Sbjct: 1 LEFAHGTTTLSFVFQGGIVAAVDSRASLGSFVGSKTTQKVLPINSHMLGTMAGGAADCSF 60
Query: 110 WHRNLGIKCRLHELA-NKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPG--- 165
W R L + +H L + RR+SV AS+LL+N LY R +GLSVGTM+ G+D+T
Sbjct: 61 WIRKLQGEAAMHVLTLDGRRMSVARASRLLSNALYDNRKLGLSVGTMVMGFDDTETKSSR 120
Query: 166 --LYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
++YVD+ G R++G F+VGSGS +A G+LD+ + D++++EA L +AI HATFRDA
Sbjct: 121 ARIFYVDNSGTRIEGDVFAVGSGSTFALGILDTEKRHDLTVDEAVALGLKAIRHATFRDA 180
Query: 224 ASGGVASVYYVG-PNGW 239
SGG +VY + +GW
Sbjct: 181 YSGGFINVYLITHEHGW 197
>gi|115712731|ref|XP_790345.2| PREDICTED: proteasome subunit beta type-5-like [Strongylocentrotus
purpuratus]
Length = 229
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 137/240 (57%), Gaps = 47/240 (19%)
Query: 15 FGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
F + D L P+ + P + +T ++ GTTTL F F+ GV++A DSR
Sbjct: 30 FTADDPLANSKFTVPAVAEPADFLANIADSETGPKIRFLHGTTTLGFKFEHGVVIAVDSR 89
Query: 75 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 134
A+ G YI+SQSVKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV A
Sbjct: 90 ATAGPYIASQSVKKVIEINPYLLGTMAGGAADCAFWERVLAEQCRIYELRNKERISVAAA 149
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVL 194
SKLLAN+LY+Y+GMGLSV
Sbjct: 150 SKLLANMLYNYKGMGLSV------------------------------------------ 167
Query: 195 DSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
+D+S+E+A + +RAI+HAT RDA SGGV ++Y++ GW K+S DV +LHY Y
Sbjct: 168 -----WDLSVEDALVMGQRAIFHATHRDAYSGGVVNLYHMQETGWVKISSTDVKDLHYRY 222
>gi|109734432|gb|AAI17734.1| Proteasome (prosome, macropain) subunit, beta type, 11 [Mus
musculus]
gi|109734838|gb|AAI17733.1| Proteasome (prosome, macropain) subunit, beta type, 11 [Mus
musculus]
gi|148704390|gb|EDL36337.1| mCG51940 [Mus musculus]
Length = 302
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 153/243 (62%), Gaps = 4/243 (1%)
Query: 24 ELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 20 HLPQAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVAC 77
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
+ +K+I ++ +LGT +G +ADC W+R L + RL EL + SV G +KLLA ++
Sbjct: 78 PASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMS 137
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD GY +DM+
Sbjct: 138 CYRGLDLCVATALCGWDHSGPALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMT 197
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVE 263
I+EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+ ++E
Sbjct: 198 IQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDACVLYRELQKA--RSLE 255
Query: 264 QEM 266
QE+
Sbjct: 256 QEL 258
>gi|30424826|ref|NP_780413.1| proteasome subunit beta type-11 precursor [Mus musculus]
gi|81895979|sp|Q8BG41.1|PSB11_MOUSE RecName: Full=Proteasome subunit beta type-11; AltName:
Full=Proteasome subunit beta-5t; Flags: Precursor
gi|26332132|dbj|BAC29796.1| unnamed protein product [Mus musculus]
gi|26334457|dbj|BAC30929.1| unnamed protein product [Mus musculus]
gi|74183992|dbj|BAE37039.1| unnamed protein product [Mus musculus]
gi|148537363|dbj|BAF63539.1| proteasome subunit beta5t [Mus musculus]
Length = 302
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 153/243 (62%), Gaps = 4/243 (1%)
Query: 24 ELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 20 HLPQAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVAC 77
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
+ +K+I ++ +LGT +G +ADC W+R L + RL EL + SV G +KLLA ++
Sbjct: 78 PASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMS 137
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD GY +DM+
Sbjct: 138 CYRGLDLCVATALCGWDHSGPALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMT 197
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVE 263
I+EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+ ++E
Sbjct: 198 IQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDACVLYRELQKA--RSLE 255
Query: 264 QEM 266
QE+
Sbjct: 256 QEL 258
>gi|441667133|ref|XP_004091951.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-11
[Nomascus leucogenys]
Length = 300
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 147/229 (64%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PHLPRAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+I ++ ++LGT +G +ADC W+R + RL EL + SV A KLL+ +
Sbjct: 77 CPASCKVIPVHQHLLGTTSGXSADCATWYRVXQRELRLRELREGQLPSVASAXKLLSAMK 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DM
Sbjct: 137 SRYRGLDLCVATALCGWDCSGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
S +EA LAR A+ HAT RDA SGG +++V +GW+++S D L+
Sbjct: 197 STQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEQVSRSDACVLY 245
>gi|17225016|gb|AAL37206.1|AF321444_1 low molecular weight polypeptide LMP7 [Paralichthys olivaceus]
Length = 273
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 141/235 (60%), Gaps = 10/235 (4%)
Query: 26 SAAPSFSLPLSTDFDEF----QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
+ P F+LPL D F +D + GTTTLAF FK GV+VA DSRAS G Y+
Sbjct: 38 TKTPEFALPLGVDPSVFLRSCNRDAGVCIDLDHGTTTLAFKFKHGVIVAVDSRASAGRYL 97
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
SS V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV A +
Sbjct: 98 SSNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAPSCCQHD 157
Query: 142 LYSYRGMGLSVGTMIAGWDETGPG--LYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
R GLS+G+MI GWD+ GPG ++ + + + + G+ +P A+ G
Sbjct: 158 AGLQR-HGLSMGSMICGWDKEGPGCTMWMIMGRVCQPACSLPAAGTRTPMAWWQRLQGRH 216
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
++EEA EL RR I HAT RDA SGGV ++Y++ +GW K+ DDV EL +HY
Sbjct: 217 ---AVEEAYELGRRGITHATHRDAYSGGVVNMYHMREDGWIKVCKDDVSELIHHY 268
>gi|194764045|ref|XP_001964142.1| GF21399 [Drosophila ananassae]
gi|190619067|gb|EDV34591.1| GF21399 [Drosophila ananassae]
Length = 293
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 151/255 (59%), Gaps = 13/255 (5%)
Query: 4 DTSGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIF 63
D GL ++S F L P P ++L L D + T + + GTTT+ +
Sbjct: 25 DQQGLRASSSNFEDPYNLAP---PGP-YNLGL---IDAQAQQTGIKIDYDPGTTTVGVQY 77
Query: 64 KEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHEL 123
+ G+++AADSR + G YISSQSVK +IEI+ ML TMAG AADC +W R L +CRL EL
Sbjct: 78 QGGIILAADSRTTNGSYISSQSVKGVIEISDSMLATMAGRAADCTYWLRVLRRECRLQEL 137
Query: 124 ANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW----DETGPGLYYVDSEGGRLKGT 179
K+ +SVT SK++ NI Y +R GL +G ++AG DE LYYVDS+G R KG
Sbjct: 138 RYKQTLSVTATSKIIFNICYRHRKRGLDLGVILAGHGGVKDEL--ELYYVDSDGYRQKGK 195
Query: 180 RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
FSVGSGS AY +LD+ Y ++M E EL +RAIY + +DA SGG VY V GW
Sbjct: 196 LFSVGSGSEVAYRILDAEYDWEMKDEVVHELVQRAIYSSALQDAISGGSVVVYQVTQLGW 255
Query: 240 KKLSGDDVGELHYHY 254
K +S D +LH Y
Sbjct: 256 KMISETDCADLHEKY 270
>gi|296214538|ref|XP_002753675.1| PREDICTED: proteasome subunit beta type-11 [Callithrix jacchus]
Length = 300
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 147/229 (64%), Gaps = 2/229 (0%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P L A + +P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 19 PYLPQAGGWLVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVA 76
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
+ K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++
Sbjct: 77 CLASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMM 136
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY +DM
Sbjct: 137 SRYRGLDLCVATALCGWDRSGPTLFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYHYDM 196
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
+ +EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 197 TNQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLY 245
>gi|348504568|ref|XP_003439833.1| PREDICTED: proteasome subunit beta type-11-like [Oreochromis
niloticus]
Length = 268
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 140/206 (67%), Gaps = 6/206 (2%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTLAF+F+ GV+ AAD+R+S G ++ + +KI+ I+ +++G +G +ADC W R
Sbjct: 43 AHGTTTLAFMFQGGVLAAADTRSSCSGLVACPASQKILPIHSHLVGLTSGTSADCALWKR 102
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD------ETGPGL 166
L + RL++L + RR+S +GA+KLL+++L+ ++G L V + GWD +GP L
Sbjct: 103 ILARELRLYQLRHGRRLSTSGAAKLLSHMLHPFKGTELCVAATLCGWDGGEKMNLSGPSL 162
Query: 167 YYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
+YV S+G RL+G FSVGSGSPYAY +LD G + ++++EA +AR A+Y AT+RDA SG
Sbjct: 163 FYVCSDGTRLRGMLFSVGSGSPYAYSILDQGVHWGLTVDEAKSIAREAVYRATYRDAYSG 222
Query: 227 GVASVYYVGPNGWKKLSGDDVGELHY 252
+Y++ GW + + +D+ E +Y
Sbjct: 223 NCVDMYHITSKGWTRRNREDLKEEYY 248
>gi|198475469|ref|XP_002132926.1| GA25177 [Drosophila pseudoobscura pseudoobscura]
gi|198138837|gb|EDY70328.1| GA25177 [Drosophila pseudoobscura pseudoobscura]
Length = 270
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 144/209 (68%)
Query: 46 TKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAA 105
T A+LK GTT L F+++ G+++ ADSR+S G +++Q++ KI+ ++ ++GT+AGG+A
Sbjct: 54 TNASLKIDHGTTALGFVYQGGIVLCADSRSSSGINVTTQTMDKIVPVSSQIVGTLAGGSA 113
Query: 106 DCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPG 165
DC +W+R L + RLHEL KR +SV A+K++ ++ +RG GL++G ++AG+ GP
Sbjct: 114 DCTYWYRVLARENRLHELRYKRPMSVDAAAKMICHVSEMHRGTGLNMGMLLAGYSPKGPS 173
Query: 166 LYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAAS 225
L YVDS+G + G RFSVGSG+ A G+LD Y+FD++ EEA +LA +++ AT DA++
Sbjct: 174 LVYVDSDGVNISGKRFSVGSGASNALGILDPMYRFDLTDEEAFDLALQSLCQATLCDAST 233
Query: 226 GGVASVYYVGPNGWKKLSGDDVGELHYHY 254
GG+ +Y+VGP + + D ELH Y
Sbjct: 234 GGMVVLYHVGPAAHRIVRKVDCMELHNKY 262
>gi|322692812|gb|EFY84700.1| proteasome component PRE2 precursor [Metarhizium acridum CQMa 102]
Length = 288
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 135/214 (63%), Gaps = 33/214 (15%)
Query: 29 PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK 88
PS L +TD D D +K A GTTTLAF F+ G++VA DSRA+ G +I+SQ+VKK
Sbjct: 79 PSSWLRAATD-DRSNPD--CPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKK 135
Query: 89 IIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM 148
CRLHEL +KRRISV ASK+LAN++YSY+GM
Sbjct: 136 -----------------------------CRLHELRHKRRISVAAASKILANLVYSYKGM 166
Query: 149 GLSVGTMIAG-WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
GLS+GTM AG E GP LYYVDS+G RL G F VGSG +AYGVLD+ Y +D+S+E+A
Sbjct: 167 GLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYNYDLSVEDA 226
Query: 208 AELARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
EL RR+I AT RDA SGG ++Y+V GW K
Sbjct: 227 LELGRRSILAATHRDAYSGGFINLYHVKEEGWVK 260
>gi|432856492|ref|XP_004068444.1| PREDICTED: proteasome subunit beta type-11-like [Oryzias latipes]
Length = 357
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 146/256 (57%), Gaps = 43/256 (16%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTLAF+F+ GV+ AAD+R+S G ++ + +KI+ I+ +++GT +G +ADC W R
Sbjct: 98 AHGTTTLAFVFQGGVLAAADTRSSCSGLVACPASQKILPIHSHLVGTTSGTSADCALWKR 157
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE----------- 161
L + RL++L N RR+S +GA+KLL+++L+ ++G L V + GWD+
Sbjct: 158 ILSRELRLYQLRNGRRLSTSGAAKLLSHMLHPFKGTELCVAATLCGWDDHSGSRRAAQGQ 217
Query: 162 --------------------------------TGPGLYYVDSEGGRLKGTRFSVGSGSPY 189
+GP L+YV S+G RL+GT FSVGSGSPY
Sbjct: 218 KTDLEAVSSDKVSLSKSSFLTQQPCARKEASLSGPSLFYVCSDGSRLQGTLFSVGSGSPY 277
Query: 190 AYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGE 249
AY +LD G ++ +++ EA +AR A+Y AT+RDA SG +Y+V GW + + +D+ E
Sbjct: 278 AYSILDQGVQWGLTVAEATSIAREAVYRATYRDAYSGNCVDIYHVTSQGWTRRTREDLKE 337
Query: 250 LHYHYYPVTPSTVEQE 265
+Y T E E
Sbjct: 338 EYYREKESRRQTHEAE 353
>gi|195159798|ref|XP_002020765.1| GL14524 [Drosophila persimilis]
gi|194117715|gb|EDW39758.1| GL14524 [Drosophila persimilis]
Length = 270
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 144/209 (68%)
Query: 46 TKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAA 105
T A+LK GTT L F+++ G+++ ADSR+S G +++Q++ KI+ ++ ++GT+AGG+A
Sbjct: 54 TNASLKIDHGTTALGFVYQGGIVLCADSRSSSGINVTTQTMDKIVPVSSQIVGTLAGGSA 113
Query: 106 DCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPG 165
DC +W+R L + RLHEL KR +SV A+K++ ++ +RG GL++G ++AG+ GP
Sbjct: 114 DCTYWYRVLARESRLHELRYKRPMSVDAAAKMICHVSEMHRGTGLNMGMLLAGYSPKGPS 173
Query: 166 LYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAAS 225
L YVDS+G + G RFSVGSG+ A G+LD Y+FD++ EEA +LA +++ AT DA++
Sbjct: 174 LVYVDSDGVNISGKRFSVGSGASNALGILDPMYRFDLTDEEAFDLALQSLCQATLCDAST 233
Query: 226 GGVASVYYVGPNGWKKLSGDDVGELHYHY 254
GG+ +++VGP + + D ELH Y
Sbjct: 234 GGMVVLHHVGPAAHRIVRKVDCMELHKKY 262
>gi|339238175|ref|XP_003380642.1| proteasome subunit beta type-5 [Trichinella spiralis]
gi|316976444|gb|EFV59740.1| proteasome subunit beta type-5 [Trichinella spiralis]
Length = 307
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 148/247 (59%), Gaps = 34/247 (13%)
Query: 42 FQKDTKATLKHAKGTTTLAFIFKE-------GVMVAADSRASMGGYI----------SSQ 84
F+ T ++ KGTTTLAFI+K G+M A DSRAS G YI +S
Sbjct: 47 FENLTGTKMQMMKGTTTLAFIYKGKTAADRGGIMFAVDSRASSGKYICIHIQVLVLKTSS 106
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
+V K+I ++ +L T+AGGAADCQFW R + C+L+EL K ISV A+K L NI+
Sbjct: 107 TVMKVIPLSGRILSTLAGGAADCQFWLRVISKICKLYELRYKCEISVAAATKTLQNIILE 166
Query: 145 YRGMGLSVGTMIAGW-----------------DETGPGLYYVDSEGGRLKGTRFSVGSGS 187
Y G GLS+G ++ G+ D+ GP LY++DSEG R K FS GSGS
Sbjct: 167 YLGYGLSMGMIVGGFNHDVRSHHHHLLFSIFDDKYGPALYFLDSEGTRKKSHLFSCGSGS 226
Query: 188 PYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDV 247
AYG+LD+ YK M+ +EA +LARRAI HAT+RD SGG SV+++ P+G+ S DV
Sbjct: 227 LNAYGILDTFYKPSMTDDEAKDLARRAIMHATYRDIGSGGQCSVFHLQPSGYNLESQTDV 286
Query: 248 GELHYHY 254
++++ +
Sbjct: 287 SDMYHSF 293
>gi|157822847|ref|NP_001099502.1| proteasome subunit beta type-11 [Rattus norvegicus]
gi|149063912|gb|EDM14182.1| rCG23402 [Rattus norvegicus]
Length = 301
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 147/228 (64%), Gaps = 2/228 (0%)
Query: 24 ELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
L A +++P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++
Sbjct: 20 RLPQAGGWAVPRGCDPQTFLQIYGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVAC 77
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
+ +K+I ++ ++LGT +G +ADC W+R L + RL EL + SV G +KLL+ ++
Sbjct: 78 PASRKVIPVHRHLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLSAMMS 137
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD Y +DM+
Sbjct: 138 RYRGLDLCVATALCGWDHSGPALFYVYSDGTCLQGDVFSVGSGSPYAYGVLDRSYHYDMT 197
Query: 204 IEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
++EA LAR A+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 198 VQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYISRSDACVLY 245
>gi|335282239|ref|XP_003354003.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-5-like
[Sus scrofa]
Length = 279
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/248 (44%), Positives = 153/248 (61%), Gaps = 10/248 (4%)
Query: 14 FFGSGDEL-CPELSAA-PSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAA 71
F+ GD + P+L P L L ++ + + H TT LAF GV+VAA
Sbjct: 27 FYRQGDHVDLPDLGPGYPGNGLSLVVPSGGVPEEPRIKMLHH--TTILAFKILLGVIVAA 84
Query: 72 DSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 131
DS YI+SQ+VK +IEI+ Y+L T A GA +C+F L + ++EL NK ISV
Sbjct: 85 DSWDMAVAYIASQTVKNVIEISLYLLATGAVGAVNCRF----LAQQXXIYELQNKGCISV 140
Query: 132 TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAY 191
ASKLLAN++Y Y+GMGLS+GTMI W + GPGLYY+DSEG + G FSVGS S +AY
Sbjct: 141 AAASKLLANMVYQYKGMGLSMGTMICVWGKRGPGLYYMDSEGNWIWGVDFSVGSRSVHAY 200
Query: 192 GVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
G + GY +D+ +E A ++A +A Y A+ DA SGG+ ++Y+V +GW + S D+V LH
Sbjct: 201 GFM--GYSYDLEVERAYDMASQATYXASXSDAYSGGLVNLYHVWEDGWIQSSSDNVAYLH 258
Query: 252 YHYYPVTP 259
Y Y +P
Sbjct: 259 YKYSEFSP 266
>gi|358367427|dbj|GAA84046.1| proteasome component PRE2 precursor [Aspergillus kawachii IFO 4308]
Length = 281
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 151/255 (59%), Gaps = 39/255 (15%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAAD 72
E P LS F+LP + F + + +K A GTTTLAF F+ G++VA D
Sbjct: 28 ESLPPLSL--KFNLPPVDNSRAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATD 85
Query: 73 SRASMGGYISSQSVKKII--------------EINPYMLGTMAGGAADCQFWHRNLGIKC 118
SRA+ G +I+SQ+VKK+I E P +LGTMAGGAA
Sbjct: 86 SRATAGNWIASQTVKKVIPVSRLSRGEDKPSNEPTPGLLGTMAGGAAT------------ 133
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGGRLK 177
E+ +KRRI+V ASK+LAN+ Y+Y+GMGLS+GTM+AG + GP LYY+DS+G RL
Sbjct: 134 ---EIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 190
Query: 178 GTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN 237
G F VGSG +AYGVLD+ Y +D++ EEA EL RR+I A RDA SGG ++Y+V
Sbjct: 191 GNLFCVGSGQTFAYGVLDANYHYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 250
Query: 238 GWKKLSGDDVGELHY 252
GW +D+ + +
Sbjct: 251 GWVHHGFNDMNPIFW 265
>gi|441594222|ref|XP_004087149.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Nomascus
leucogenys]
Length = 160
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 116/155 (74%)
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
M+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GW
Sbjct: 1 MSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSIGSMICGW 60
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT
Sbjct: 61 DKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYAT 120
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 121 HRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 155
>gi|402468273|gb|EJW03457.1| hypothetical protein EDEG_02222 [Edhazardia aedis USNM 41457]
Length = 184
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 123/159 (77%), Gaps = 5/159 (3%)
Query: 48 ATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADC 107
+TL KGTTTLAF FK+G+++A DSRA+ G YI+SQS++K+IEIN ++LGTMAGGAADC
Sbjct: 24 STLNFEKGTTTLAFTFKDGMIIAVDSRATAGSYIASQSIQKVIEINSHLLGTMAGGAADC 83
Query: 108 QFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD----ETG 163
Q+W + +GI C+ + L +RIS AS+ L+N++Y+Y+G GLS+GTM+ G+D +T
Sbjct: 84 QYWEKVMGIHCKRYMLQENKRISAAHASRYLSNLIYNYKGYGLSMGTMVCGFDYCGTKTV 143
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
P +YYVD++G R+KG FSVGSGS AYG+L ++FDM
Sbjct: 144 PAIYYVDNDGRRVKGDLFSVGSGSTIAYGILQD-HRFDM 181
>gi|332823719|ref|XP_003311252.1| PREDICTED: proteasome subunit beta type-8 [Pan troglodytes]
Length = 160
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 116/155 (74%)
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
M+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GW
Sbjct: 1 MSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGW 60
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT
Sbjct: 61 DKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYAT 120
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 121 HRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 155
>gi|426232752|ref|XP_004023679.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
type-11-like [Ovis aries]
Length = 279
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 144/232 (62%), Gaps = 12/232 (5%)
Query: 20 ELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
E P L A S+++P D F + L H GTTTLAF F+ GV+ AAD+R+S G
Sbjct: 16 ETSPPLPQAGSWAVPRGWDPQAFLQTHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGN 73
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
Y++ + +K+I ++ ++LGT +G +ADC W+ + RL L + SV GA+KLL+
Sbjct: 74 YVACPASRKVIPVHQHLLGTTSGTSADCVTWYXQREL--RLRALREGQLPSVAGAAKLLS 131
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
++ YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD GY+
Sbjct: 132 VMMSRYRGLDLCVATALCGWDRSGPALFYVYSDGTFLQGDIFSVGSGSPYAYGVLDRGYR 191
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
+DMS RA+ HAT RDA SGG +++V +GW+ +S D L+
Sbjct: 192 YDMST--------RAVAHATHRDAYSGGSVDLFHVRESGWEYVSCHDAWVLY 235
>gi|426352665|ref|XP_004043830.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Gorilla
gorilla gorilla]
Length = 160
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 116/155 (74%)
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
M+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GW
Sbjct: 1 MSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGW 60
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT
Sbjct: 61 DKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYAT 120
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 121 HRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 155
>gi|410928748|ref|XP_003977762.1| PREDICTED: proteasome subunit beta type-11-like [Takifugu rubripes]
Length = 299
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 137/213 (64%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
+ GTTTL FIF+ G++ AAD+RAS G +S S +KI I+ +++ T +G ADC W R
Sbjct: 83 SHGTTTLGFIFQGGLIAAADTRASAKGLVSCSSTQKISPIHSHLVVTCSGSGADCMMWRR 142
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
L + RL++L + R +S+ G +KLL+ +L+ ++G + V ++ GWD+ GP L YV S+
Sbjct: 143 ILTRETRLYQLRHGRCLSIRGTAKLLSFMLHPFKGTEVCVALILCGWDKDGPKLIYVCSD 202
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G RL+G FSVGSGSPYAYGVLD ++++S EEA LAR A++ AT RDA SG ++
Sbjct: 203 GARLQGDLFSVGSGSPYAYGVLDREQRWNLSKEEAFSLAREAVFRATHRDAYSGNNVDLF 262
Query: 233 YVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQE 265
++ GW+K D+ E +Y + VE+
Sbjct: 263 HITDQGWQKKERVDLKEEYYRDIERKANKVEER 295
>gi|395728691|ref|XP_003775418.1| PREDICTED: proteasome subunit beta type-8 [Pongo abelii]
Length = 160
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 116/155 (74%)
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
M+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GW
Sbjct: 1 MSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGW 60
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ GPGLYYV+ G RL G FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT
Sbjct: 61 DKKGPGLYYVNEHGTRLSGNMFSTGSGNAYAYGVMDSGYRPNLSPEEAYDLGRRAIAYAT 120
Query: 220 FRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
RD+ SGGV ++Y++ +GW K+ DV +L + Y
Sbjct: 121 HRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 155
>gi|425766229|gb|EKV04853.1| Proteasome subunit beta type [Penicillium digitatum PHI26]
Length = 291
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 151/253 (59%), Gaps = 29/253 (11%)
Query: 22 CPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
P LS FSLP + F + + +K A GTTTLAF F+ G++V DSR
Sbjct: 30 VPPLSL--KFSLPPVDNRSAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVCTDSR 87
Query: 75 ASMGGYISSQSVKKIIEIN--------------PYMLGTMAGGAADCQFWHRNLGIKCRL 120
A+ G +I+SQ+VKK+I ++ P +LGTMAGGAA + ++ R
Sbjct: 88 ATAGNWIASQTVKKVIPVSRLSRGEDKKSNQPTPGLLGTMAGGAARGKDTAHEFYLEIR- 146
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGT 179
+KRRI+V ASK+LAN+ Y+Y+G GLS+GTM+AG + GP LYY+DS+G RL G
Sbjct: 147 ----HKRRITVAAASKILANLTYAYKGYGLSMGTMLAGMTPQEGPALYYIDSDGTRLPGN 202
Query: 180 RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
F VGSG +AYGVLD+ YK++++ EEA L RRAI A RDA SGG ++Y+V GW
Sbjct: 203 LFCVGSGQTFAYGVLDAEYKYELTEEEALNLGRRAILAAMHRDAYSGGFINLYHVKEEGW 262
Query: 240 KKLSGDDVGELHY 252
DD+ + +
Sbjct: 263 VHHGFDDMNPIFW 275
>gi|425779151|gb|EKV17240.1| Proteasome subunit beta type [Penicillium digitatum Pd1]
Length = 275
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 151/253 (59%), Gaps = 29/253 (11%)
Query: 22 CPELSAAPSFSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSR 74
P LS FSLP + F + + +K A GTTTLAF F+ G++V DSR
Sbjct: 14 VPPLSL--KFSLPPVDNRSAFLRAMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVCTDSR 71
Query: 75 ASMGGYISSQSVKKIIEIN--------------PYMLGTMAGGAADCQFWHRNLGIKCRL 120
A+ G +I+SQ+VKK+I ++ P +LGTMAGGAA + ++ R
Sbjct: 72 ATAGNWIASQTVKKVIPVSRLSRGEDKKSNQPTPGLLGTMAGGAARGKDTAHEFYLEIR- 130
Query: 121 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGT 179
+KRRI+V ASK+LAN+ Y+Y+G GLS+GTM+AG + GP LYY+DS+G RL G
Sbjct: 131 ----HKRRITVAAASKILANLTYAYKGYGLSMGTMLAGMTPQEGPALYYIDSDGTRLPGN 186
Query: 180 RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
F VGSG +AYGVLD+ YK++++ EEA L RRAI A RDA SGG ++Y+V GW
Sbjct: 187 LFCVGSGQTFAYGVLDAEYKYELTEEEALNLGRRAILAAMHRDAYSGGFINLYHVKEEGW 246
Query: 240 KKLSGDDVGELHY 252
DD+ + +
Sbjct: 247 VHHGFDDMNPIFW 259
>gi|410920984|ref|XP_003973963.1| PREDICTED: proteasome subunit beta type-11-like [Takifugu rubripes]
Length = 375
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 148/276 (53%), Gaps = 63/276 (22%)
Query: 25 LSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
L+++PS LP L H GTTTLAFIF+ GV+ AAD+R+S G ++
Sbjct: 91 LASSPSVPLPFP-------------LSH--GTTTLAFIFQGGVLAAADTRSSCSGLVACP 135
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
+ +KI+ I+ +++GT +G +ADC W R L + RL++L + RR+S GA+KL +++L+
Sbjct: 136 ASQKIVPIHSHLVGTTSGTSADCVLWKRILARELRLYQLRHGRRLSTRGAAKLFSHMLHP 195
Query: 145 YRGMGLSVGTMIAGWDETG----------------------------------------- 163
++G L V + GWD TG
Sbjct: 196 FKGTELCVAATLCGWDGTGGDTSGKANASMHSGSMKPQVSHFRTPVDGGPGTSAPKASAG 255
Query: 164 -------PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIY 216
P LYYV S+G RL+GT FSVGSGSPYAY +LD G ++D+S+EEA +AR A++
Sbjct: 256 VRSSFSGPSLYYVCSDGTRLQGTVFSVGSGSPYAYSILDQGVEWDLSVEEATSVAREAVF 315
Query: 217 HATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
AT RDA SG VY + GW + +D+ E +Y
Sbjct: 316 RATHRDAYSGNCVDVYLISSKGWTRRRREDLKEEYY 351
>gi|148702198|gb|EDL34145.1| mCG7455 [Mus musculus]
Length = 144
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 110/142 (77%)
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+ TMI GWD+ GPGLYYVDSEG R+
Sbjct: 1 QCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMDTMICGWDKRGPGLYYVDSEGNRI 60
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
GT F+VGSG YAYGV+D GY +D+ +EEA +LA +AIY AT+RDA SGG ++Y+V
Sbjct: 61 SGTAFAVGSGFVYAYGVMDRGYSYDLKVEEAYDLACQAIYQATYRDAYSGGAVNLYHVQE 120
Query: 237 NGWKKLSGDDVGELHYHYYPVT 258
+GW ++S D V +LH Y V+
Sbjct: 121 DGWIRVSSDTVADLHDKYSSVS 142
>gi|348540002|ref|XP_003457477.1| PREDICTED: proteasome subunit beta type-11-like [Oreochromis
niloticus]
Length = 224
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 131/200 (65%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
A GTTTL FIF+ GV+ AAD+RAS GG ++ +V KI I+ +++ T +G ADC W R
Sbjct: 10 AHGTTTLGFIFQGGVIAAADTRASAGGLVACPAVHKITPIHSHLVVTSSGSGADCMLWER 69
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
L + RL++L + R+S+ +KLL+++L+ ++G + V + GWD+ GP L YV S+
Sbjct: 70 ILIREIRLYQLRHGHRLSIRATAKLLSSMLHPFKGTEMCVALTLCGWDKRGPKLIYVCSD 129
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G RL+G FSVGSGSPYAYGVLD ++ +S EA LAR A++ AT RDA SG ++
Sbjct: 130 GARLQGDVFSVGSGSPYAYGVLDRELRWSLSKGEAISLAREAVFRATHRDAYSGNNVDLF 189
Query: 233 YVGPNGWKKLSGDDVGELHY 252
++ GW + +D+ E +Y
Sbjct: 190 HITAQGWSQRKREDLKEEYY 209
>gi|9408027|emb|CAB99309.1| proteasome beta-5 subunit [Giardia intestinalis]
Length = 261
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 121/165 (73%), Gaps = 1/165 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+AF F+ G+++A DSR++ G ++SS V+K+IEI P++LGT+AG A DCQFW R+L
Sbjct: 83 GTTTIAFCFRGGILLAVDSRSTQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWERDL 142
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG-PGLYYVDSEG 173
G KCRL+EL N RI + ASKL + L+S G +SVG MI+G+D T P +YY DSEG
Sbjct: 143 GRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDSTNHPCIYYCDSEG 202
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHA 218
R+ G + GSGS +A+G++D+ Y F+M+ E+A L ++AIYHA
Sbjct: 203 TRIGGYLYGAGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHA 247
>gi|222138149|gb|ACM45577.1| LMP7 [Scophthalmus maximus]
Length = 273
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 135/230 (58%), Gaps = 10/230 (4%)
Query: 31 FSLPLSTDFDEF----QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
F++P D F +D + GTTTLAF FK GV+VA DSRAS G Y++S V
Sbjct: 43 FAVPPGVDPSGFLKSCNRDGGVCIDLDHGTTTLAFKFKHGVIVAVDSRASAGSYLASNDV 102
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV A + R
Sbjct: 103 NKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAPSCCQHDAGLQR 162
Query: 147 GMGLSVGTMIAGWDETGPG--LYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSI 204
GLS+G+MI GWD GPG ++ + + +VG+ SP A+ G +
Sbjct: 163 -HGLSMGSMICGWDREGPGCTMWMITGRVCLAACSLPAVGAASPTAWWQRFPGRH---AT 218
Query: 205 EEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
EEA EL RR I HAT RDA SGGV ++Y++ +GW K+ DDV EL + Y
Sbjct: 219 EEAYELGRRGIVHATHRDAYSGGVVNMYHMREDGWIKVCKDDVSELIHRY 268
>gi|323306838|gb|EGA60123.1| Pre2p [Saccharomyces cerevisiae FostersO]
Length = 168
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 112/154 (72%), Gaps = 1/154 (0%)
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
MAGGAADCQFW LG +CRLHEL K RISV ASK+L+N++Y Y+G GLS+GTMI G+
Sbjct: 1 MAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGY 60
Query: 160 D-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHA 218
+ GP +YYVDS+G RLKG F VGSG +AYGVLDS YK+D+S+E+A L +R+I A
Sbjct: 61 TRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAA 120
Query: 219 TFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
RDA SGG ++Y+V +GW DVGEL +
Sbjct: 121 AHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFW 154
>gi|354482254|ref|XP_003503314.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-5-like
[Cricetulus griseus]
Length = 256
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 6 SGLESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKE 65
S LE P G P S +PS L L+ ++ K + H G TT+AF +
Sbjct: 5 SILEQWMPMNQHGFFFYPLGSGSPSDGLSLAAPSWGVPEEXKIKMFH--GNTTMAFKLIQ 62
Query: 66 GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELAN 125
G+++A +S G I+SQ+VK IEI+PY+ GTMAGGAADC FW L CR++EL N
Sbjct: 63 GIILATNSWTIAGASIASQTVK--IEIHPYLQGTMAGGAADCSFWEGLLPQXCRIYELLN 120
Query: 126 KRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP---GLYYVDSEGGRLKGTRFS 182
K ISV GASKLLAN++Y Y+ M LSVGTMI ++ L+YV E + GT F
Sbjct: 121 KECISVAGASKLLANMVYHYKIMXLSVGTMIRSCNKRESLLLQLHYVVGERKSISGTIFF 180
Query: 183 VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKL 242
VG GS Y Y V+D G +D+ +EE +LA IY AT+RD S G ++Y+V +G +
Sbjct: 181 VGFGSMYIYRVVDQGXSYDLEVEETYDLAHXDIYQATYRDVYSXGELNLYHVWEDGXICV 240
Query: 243 SGDDVGELH 251
S D V +LH
Sbjct: 241 SSDSVADLH 249
>gi|432915289|ref|XP_004079162.1| PREDICTED: proteasome subunit beta type-11-like [Oryzias latipes]
Length = 294
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 134/232 (57%), Gaps = 34/232 (14%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTL FIF+ GV+ AAD+RAS GG ++ +V KI I+ +++ T +G ADC W R L
Sbjct: 41 GTTTLGFIFQGGVIAAADTRASAGGLVACPAVHKITPIHSHLVVTSSGSGADCMLWERIL 100
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE------------- 161
+ RL++L +KRR+S+ G +KLL+ +L+ ++G + V + GWD+
Sbjct: 101 TREIRLYQLRHKRRLSIRGTAKLLSLMLHPFKGTDVCVALTLCGWDKAESTKNLEETLGV 160
Query: 162 ---------------------TGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKF 200
+GP L YV S+G RL+G FSVGSGSPYAYGVLD +
Sbjct: 161 TDDCSPSVCKDVPSKTNLLCFSGPKLIYVCSDGARLQGDIFSVGSGSPYAYGVLDRSLSW 220
Query: 201 DMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
++ EEA LAR A++ AT RDA SG +++V GW++ +D+ E +Y
Sbjct: 221 SLNKEEAILLAREAVFRATHRDAYSGNNVDLFHVTAEGWRQRQREDLKEEYY 272
>gi|338717158|ref|XP_003363600.1| PREDICTED: proteasome subunit beta type-5-like isoform 2 [Equus
caballus]
Length = 203
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 106/138 (76%), Gaps = 11/138 (7%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F+ GV+VAADSRA+ G YI+SQ+V
Sbjct: 42 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFQHGVIVAADSRATAGAYIASQTV 90
Query: 87 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYR 146
KK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+
Sbjct: 91 KKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK 150
Query: 147 GMGLSVGTMIAGWDETGP 164
GMGLS+GTMI GWD+ GP
Sbjct: 151 GMGLSMGTMICGWDKRGP 168
>gi|326678924|ref|XP_002667581.2| PREDICTED: protein sel-1 homolog 3-like, partial [Danio rerio]
Length = 623
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 139/204 (68%), Gaps = 2/204 (0%)
Query: 49 TLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 108
TL H GTTTL F F+ GV+ AAD+R+S G ++ + K++ I+ +++GT +G +ADC
Sbjct: 17 TLSH--GTTTLGFAFQGGVIAAADTRSSCAGKVACPASPKVLPIHSHLVGTTSGTSADCA 74
Query: 109 FWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYY 168
W R L + RL++L ++RR+S GA+KLL+++L+ ++G L V + GWD GP + Y
Sbjct: 75 LWKRILARELRLYQLRHRRRLSTGGAAKLLSHMLHPFKGTELCVAATLCGWDGGGPRVVY 134
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
V S+G RL+G FSVGSGSPYAY +LD G ++ MS +EAA +AR A+Y AT+RDA SG
Sbjct: 135 VCSDGLRLQGALFSVGSGSPYAYSILDGGVRWGMSAQEAAAVAREAVYRATYRDAYSGNN 194
Query: 229 ASVYYVGPNGWKKLSGDDVGELHY 252
+Y+V GW++ +++ E +Y
Sbjct: 195 VDLYHVTAKGWRRRERENLKEEYY 218
>gi|119586598|gb|EAW66194.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
CRA_b [Homo sapiens]
Length = 148
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 94/110 (85%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 4 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 63
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GP
Sbjct: 64 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGP 113
>gi|301624549|ref|XP_002941563.1| PREDICTED: proteasome subunit beta type-11-like [Xenopus (Silurana)
tropicalis]
Length = 277
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 143/244 (58%), Gaps = 20/244 (8%)
Query: 20 ELCP----ELSAAPSFSLPLSTDFDEFQKDTKATLKH-------AKGTTTLAFIFKEGVM 68
LCP + +++P LP Q A+ +H A GTTTLAFI+ GV+
Sbjct: 21 NLCPFPGLKFASSPHVFLP--------QHSVSASSRHPEGPPPPAHGTTTLAFIYSGGVV 72
Query: 69 VAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRR 128
A D+R+S G + S +K I+ ++L T +G +ADCQ + R L +CR+++L N
Sbjct: 73 AATDTRSSAGHLVCSPDSRKATLIHSHLLATTSGSSADCQLFGRALARECRIYQLRNGYM 132
Query: 129 ISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR-FSVGSGS 187
SV GA+K+L+ I+ +RGM + + GWD GP + YV ++G R+ + SVGSGS
Sbjct: 133 PSVRGAAKMLSMIMMPFRGMKVCAAFTLCGWDRNGPCICYVYNDGTRISSSNVISVGSGS 192
Query: 188 PYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDV 247
PYAY ++D GY+ M EEA +LARRA+ HA RDA SGG VY++ G ++ + +D+
Sbjct: 193 PYAYSIIDDGYRVGMGEEEARKLARRAVCHAGRRDAYSGGSVDVYWIREGGCERDAREDL 252
Query: 248 GELH 251
+L+
Sbjct: 253 VQLY 256
>gi|410048028|ref|XP_003954551.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-5 [Pan
troglodytes]
Length = 200
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 94/110 (85%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GP
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGP 168
>gi|28207945|emb|CAD62626.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 94/110 (85%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 57 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 116
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GP
Sbjct: 117 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGP 166
>gi|222144262|ref|NP_001138404.1| proteasome subunit beta type-5 isoform 3 [Homo sapiens]
gi|426376397|ref|XP_004054987.1| PREDICTED: proteasome subunit beta type-5 isoform 8 [Gorilla
gorilla gorilla]
gi|194374157|dbj|BAG62391.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 94/110 (85%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GP
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGP 168
>gi|332223030|ref|XP_003260674.1| PREDICTED: proteasome subunit beta type-5 isoform 5 [Nomascus
leucogenys]
Length = 203
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 94/110 (85%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GP
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGP 168
>gi|327289327|ref|XP_003229376.1| PREDICTED: proteasome subunit beta type-11-like [Anolis
carolinensis]
Length = 372
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 130/199 (65%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
+ GTTTLAF GV+VAAD+R+S G IS S +K+I ++ ++L T +G +ADC W R
Sbjct: 81 SHGTTTLAFRCSHGVVVAADTRSSCGSLISDPSSRKVITLHRHLLATTSGTSADCATWLR 140
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
L RL L ++ SV GA+KLLA +L L V T++ GWD GPGLYYV S+
Sbjct: 141 LLRCSLRLRHLNEGQQPSVAGAAKLLAFLLRGCHSKDLCVATLLCGWDHNGPGLYYVYSD 200
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G L G FSVGSGSPYAYGV+D GY +D+ +EA LAR+A+ HA RD+ SGG +Y
Sbjct: 201 GTCLSGDVFSVGSGSPYAYGVMDGGYSYDLPHDEAFLLARQAVGHAAHRDSYSGGNVDLY 260
Query: 233 YVGPNGWKKLSGDDVGELH 251
+V +GW +S +D+ +++
Sbjct: 261 HVRSSGWVCISREDLTDVY 279
>gi|349802779|gb|AEQ16862.1| putative proteasome subunit beta type-5 [Pipa carvalhoi]
Length = 154
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 115/205 (56%), Gaps = 67/205 (32%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC F
Sbjct: 17 IEFLHGTTTLAFKFRHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSF 76
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
W S+GTMI GWD+ GPGLYYV
Sbjct: 77 WE---------------------------------------SMGTMI-GWDKRGPGLYYV 96
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
DSEG R+ G+ FSVGSGS YAYGVLD GY GGV
Sbjct: 97 DSEGNRVSGSVFSVGSGSMYAYGVLDRGY---------------------------GGVV 129
Query: 230 SVYYVGPNGWKKLSGDDVGELHYHY 254
++Y+V +GW+++S DDV +LH Y
Sbjct: 130 NLYHVREDGWERVSQDDVADLHQKY 154
>gi|373249054|dbj|BAL46039.1| proteasome subunit beta 5tb [Danio rerio]
Length = 362
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 139/240 (57%), Gaps = 38/240 (15%)
Query: 49 TLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 108
TL H GTTTL F F+ GV+ AAD+R+S G ++ + K++ I+ +++GT +G +ADC
Sbjct: 105 TLSH--GTTTLGFAFQGGVIAAADTRSSCAGKVACPASPKVLPIHSHLVGTTSGTSADCA 162
Query: 109 FWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-------- 160
W R L + RL++L ++RR+S GA+KLL+++L+ ++G L V + GWD
Sbjct: 163 LWKRILARELRLYQLRHRRRLSTGGAAKLLSHMLHPFKGTELCVAATLCGWDGDEDQDNE 222
Query: 161 ----------------------------ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYG 192
GP + YV S+G RL+G FSVGSGSPYAY
Sbjct: 223 QPMTERYANTTLTSKSSSQSAASSGLSGVRGPRVVYVCSDGLRLQGALFSVGSGSPYAYS 282
Query: 193 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252
+LD G ++ MS +EAA +AR A+Y AT+RDA SG +Y+V GW++ +++ E +Y
Sbjct: 283 ILDGGVRWGMSAQEAAAVAREAVYRATYRDAYSGNNVDLYHVTAKGWRRRERENLKEEYY 342
>gi|301629961|ref|XP_002944100.1| PREDICTED: proteasome subunit beta type-8-like, partial [Xenopus
(Silurana) tropicalis]
Length = 141
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 99/135 (73%)
Query: 120 LHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT 179
L++L N RISV+ ASKLL N++ YRG GLS+G+MI GWD+ GPGLYYVD G RL G
Sbjct: 1 LYQLRNNSRISVSAASKLLCNMMLQYRGSGLSMGSMICGWDKMGPGLYYVDDNGTRLSGD 60
Query: 180 RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
FS GSG+ YAYGV+DSGY++D++ EA +L RRA+ +A RD SGGV ++Y++ +GW
Sbjct: 61 IFSTGSGNSYAYGVMDSGYRYDLTPVEAYDLGRRAVSYAAHRDNYSGGVVNMYHMKEDGW 120
Query: 240 KKLSGDDVGELHYHY 254
K+ DVG+L Y Y
Sbjct: 121 VKVGEFDVGDLLYKY 135
>gi|38048467|gb|AAR10136.1| similar to Drosophila melanogaster Prosbeta5, partial [Drosophila
yakuba]
Length = 174
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 96/137 (70%), Gaps = 4/137 (2%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGG 79
P AAP F PL + ++ Q + T + GTTTL F FK GV++A DSRA+ G
Sbjct: 39 PYALAAPPFENPLH-NLNQIQANADKTGIKIDFDHGTTTLGFKFKGGVLLAVDSRATGGS 97
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
YI SQS+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISV ASK++A
Sbjct: 98 YIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMA 157
Query: 140 NILYSYRGMGLSVGTMI 156
NI + Y+GMGLS+G M+
Sbjct: 158 NIAHEYKGMGLSMGMML 174
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 128/202 (63%), Gaps = 1/202 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTT+ + +G+++A++ RA+MG +I+S++ KK+ +I+ + T AG D Q
Sbjct: 5 KYLKGTTTVGVVCTDGIVLASEQRATMGNFIASKTAKKVYQIDDLVAMTTAGSVGDAQQL 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ +L+++ +++ G + L++N L S R + V +I G D+ GPG+Y +D
Sbjct: 65 VRLVNVESQLYKMRRNESMTIKGIATLMSNFLNSNRYYPMMVQLLIGGVDKNGPGIYSLD 124
Query: 171 SEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
+ GG ++ TR S GSGSP AYGVL+ Y+ DM+++E +LA RAI++AT RD+ASG
Sbjct: 125 ALGGSIEETRISATGSGSPMAYGVLEDQYREDMTVKEGLDLAIRAIHNATKRDSASGENI 184
Query: 230 SVYYVGPNGWKKLSGDDVGELH 251
V + +++L ++V +
Sbjct: 185 DVVVITKEAFRRLDPEEVKSIR 206
>gi|56567040|gb|AAV98549.1| proteasome subunit beta type 5 [Macaca mulatta]
Length = 108
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/106 (63%), Positives = 86/106 (81%)
Query: 146 RGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ +E
Sbjct: 1 KGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVE 60
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
+A +LARRAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH
Sbjct: 61 QAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 106
>gi|349805275|gb|AEQ18110.1| putative psmb8 protein [Hymenochirus curtipes]
Length = 119
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 91/119 (76%)
Query: 129 ISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSP 188
ISV+ ASKL+ N++ YRG GLSVG+MI GWD+ GPGLYYVD G RL G FS GSG+
Sbjct: 1 ISVSAASKLMCNMMLQYRGTGLSVGSMICGWDKKGPGLYYVDDNGTRLSGDVFSTGSGNS 60
Query: 189 YAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDV 247
YAYGV+DSGY+++++ EEA +L RRAI +AT RDA SGGV ++Y++ +GW K+ DV
Sbjct: 61 YAYGVMDSGYRYELTPEEAYDLGRRAISYATHRDAYSGGVVNLYHMKEDGWMKIGQLDV 119
>gi|323456588|gb|EGB12455.1| hypothetical protein AURANDRAFT_20025 [Aureococcus anophagefferens]
Length = 197
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 117/191 (61%), Gaps = 7/191 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+AF F G M DSRAS+G ++ S S +K I ++ LGTMAG A DC +W R L
Sbjct: 4 GTTTVAFRFDGGTMCCVDSRASLGNFVGSYSTEKAIPVSRTTLGTMAGSAGDCTYWLRLL 63
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSY-RGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+L EL S ++ LA +L + + LSVGTM+ +D+ L Y D+ G
Sbjct: 64 SATSKLAELETGFPPSARRNAEYLAGLLSRQDKNLDLSVGTMM--FDD--ATLTYADNSG 119
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
L G F+VGSGSPYAY VLD+GY+ D++++EAA+LA +A+ A RDA SGG+ +VY+
Sbjct: 120 ACLAGHLFAVGSGSPYAYSVLDAGYRADLNVDEAADLAEKAVRTAAARDAYSGGIVNVYF 179
Query: 234 V--GPNGWKKL 242
W++L
Sbjct: 180 ADKATGKWRRL 190
>gi|405965865|gb|EKC31214.1| Proteasome subunit beta type-8 [Crassostrea gigas]
Length = 777
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 82/102 (80%)
Query: 153 GTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELAR 212
GTMI GWD+ GPGLYYVDS+G R+ +SVGSGS YAYGVLDSGY++D+S+EEA +L R
Sbjct: 669 GTMICGWDKRGPGLYYVDSDGERMSNNIYSVGSGSVYAYGVLDSGYRYDLSVEEAIDLGR 728
Query: 213 RAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 254
R+IYHAT RDA SGGV ++Y++ +GW+ +S DV +LHY Y
Sbjct: 729 RSIYHATHRDAYSGGVVNLYHMKESGWEFISQTDVFDLHYQY 770
>gi|3122620|sp|Q29576.1|PSB8_PIG RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Macropain subunit C13; AltName: Full=Multicatalytic
endopeptidase complex subunit C13; AltName:
Full=Proteasome component C13; AltName: Full=Proteasome
subunit beta-5i
Length = 104
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 83/104 (79%)
Query: 119 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 178
RL+ L N RISV+ ASKL +N++Y YRGMGLS+G+MI GWD+ GPGLYYVD G RL G
Sbjct: 1 RLYYLRNGARISVSAASKLXSNMMYQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSG 60
Query: 179 TRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
FS GSG+ YAYGV+DSG+++D+SIEEA +L RRAI HAT RD
Sbjct: 61 NMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 104
>gi|195055624|ref|XP_001994713.1| GH14538 [Drosophila grimshawi]
gi|193892476|gb|EDV91342.1| GH14538 [Drosophila grimshawi]
Length = 275
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 122/198 (61%), Gaps = 1/198 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTL F ++ G++++A+SR + ISS S++KII ++ +LGT AG A DC FW R L
Sbjct: 56 GTTTLGFKYQGGIILSAESRVTNEESISSTSMEKIIVVHKNILGTFAGCAGDCAFWCRAL 115
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSEG 173
+CRL EL + V ASK+++N++Y +R + L +G M+AG+D G L YVDSEG
Sbjct: 116 TRECRLFELNYGHCMPVIIASKMMSNMMYRFRDLELYMGMMLAGYDPVDGAKLIYVDSEG 175
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
+ VGSG YA G++ YK+D+ +EA LA I++A+ D +GG S+Y+
Sbjct: 176 SHEEVNCHVVGSGEVYASGLIKRFYKWDLGNDEAYNLALNVIHNASQMDWHTGGPISLYH 235
Query: 234 VGPNGWKKLSGDDVGELH 251
+ +GW ++ EL+
Sbjct: 236 MRQDGWSCVTKKTPQELN 253
>gi|294495429|ref|YP_003541922.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
gi|302595753|sp|D5EAS6.1|PSB_METMS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|292666428|gb|ADE36277.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
Length = 210
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 126/201 (62%), Gaps = 1/201 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
KH KGTTT+ + +GV++A + RA+MG +I+S++ KKI +I+ + T AG D Q
Sbjct: 5 KHLKGTTTVGIVCSDGVVLATEKRATMGNFIASKTAKKIYQIDDLVGMTTAGSVGDAQQL 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ +L+++ + I++ G + LL+NIL R L V ++ G D+ GP ++ +D
Sbjct: 65 VRMISVESKLYKMRRQESITIKGLTTLLSNILGGQRYFPLMVQLLVGGVDKNGPAIFSLD 124
Query: 171 SEGGRLKGTR-FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
+ GG ++ T+ + GSGSP AYGVL+ Y ++++E ELA RA+Y+A RD+ASG
Sbjct: 125 AMGGNIEETKAVATGSGSPMAYGVLEDRYHEGINVDEGMELAVRALYNAMKRDSASGNGI 184
Query: 230 SVYYVGPNGWKKLSGDDVGEL 250
V + +G+K++ +V ++
Sbjct: 185 DVVKITADGYKRIETGEVDKI 205
>gi|336477060|ref|YP_004616201.1| proteasome endopeptidase complex subunit beta [Methanosalsum
zhilinae DSM 4017]
gi|335930441|gb|AEH60982.1| proteasome endopeptidase complex, beta subunit [Methanosalsum
zhilinae DSM 4017]
Length = 210
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 122/200 (61%), Gaps = 1/200 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTT+ + ++GV++A + RA+MG I+S++ KKI +I+ + T AG D Q
Sbjct: 5 KYLKGTTTVGIVCRDGVVLATEKRATMGNLIASKTAKKIYQIDDLVGLTTAGSVGDAQQI 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ RL+++ + +++ G + LL+N+L R L V +I G D+ GP LY +D
Sbjct: 65 VRLISVESRLYKMRRQETMTIKGITTLLSNLLSGQRYYPLMVQLLIGGVDKKGPNLYSLD 124
Query: 171 SEGGRLKGTR-FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
+ GG ++ T + GSGSP AYGVL+ Y DMSIEE A+LA RA+++A RD+ASG
Sbjct: 125 ALGGMIEETNAVATGSGSPIAYGVLEDRYHTDMSIEEGADLAIRALHNAMKRDSASGNGI 184
Query: 230 SVYYVGPNGWKKLSGDDVGE 249
V + + + D V E
Sbjct: 185 DVVCITDENYMHMEEDLVNE 204
>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
Length = 208
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 116/196 (59%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ K+GV+ A ++RA+MG ++ + KI +I+ ++ T+AG +D Q +
Sbjct: 8 KGTTTVGLTCKDGVVFATETRATMGNLVAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKY 67
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ + L L N +RI+V A+ L +NIL+S RG V T++ G D+ GP LY +D G
Sbjct: 68 IRAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGVDDKGPALYSLDPTG 127
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G +K S GSGSP AYGVL+ Y D+ +EE ++A RAI A RD SG V
Sbjct: 128 GVIKDLVISTGSGSPVAYGVLEDRYSQDLYVEEGIDVAIRAIKSAMERDTYSGNSILVAT 187
Query: 234 VGPNGWKKLSGDDVGE 249
+ G+K+LS ++V +
Sbjct: 188 ITEEGFKRLSEEEVNQ 203
>gi|17380265|sp|Q9P992.1|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
Length = 210
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 126/198 (63%), Gaps = 1/198 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTT+ + +G+++A++ RA+MG +I+S++ KK+ +I+ + T AG D Q
Sbjct: 5 KYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQL 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ +L+++ +++ G + L++N L R + V +I G D+ GPG+Y +D
Sbjct: 65 VRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPGIYSLD 124
Query: 171 SEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
+ GG ++ TR S GSGSP AYGVL+ Y+ +M+++E +LA RAI++AT RD+ASG
Sbjct: 125 AMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENI 184
Query: 230 SVYYVGPNGWKKLSGDDV 247
V + +K+L ++V
Sbjct: 185 DVVVITKEAFKRLDPEEV 202
>gi|91772427|ref|YP_565119.1| proteasome endopeptidase complex [Methanococcoides burtonii DSM
6242]
gi|121689381|sp|Q12YV7.1|PSB_METBU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|91711442|gb|ABE51369.1| Proteasome subunit beta precursor [Methanococcoides burtonii DSM
6242]
Length = 210
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
KH KGTTT+ + +GV++A + RA+MG +I+S++ KKI +I+ + T AG D Q
Sbjct: 5 KHLKGTTTVGIVCTDGVVLATEQRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQI 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ +L ++ + I++ G + LL+N+L R L V +I G D+ GP +Y +D
Sbjct: 65 VRIISVESKLFKMRRQESITIKGITTLLSNMLSGQRYYPLMVQLLIGGVDKNGPAIYSLD 124
Query: 171 SEGGRLKGTR-FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
+ GG ++ TR S GSGSP AYGVL+ Y DM++ E +LA RA+++A RD+ASG
Sbjct: 125 ALGGNIEETRAVSTGSGSPMAYGVLEDRYTEDMTVVEGVDLAIRALHNAMKRDSASGENI 184
Query: 230 SVYYVGPNGWKKL 242
V + + +++L
Sbjct: 185 DVVVITKDKYERL 197
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ IFK+GV++A + RA+MG I+S+ KKI +I P + T AGG D Q R
Sbjct: 10 KGTTTVGLIFKDGVVLATEMRATMGNLIASKRAKKIYKITPRIGMTTAGGVGDAQQLVRI 69
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ ++C L+E+ R +SV AS LL+N L R V ++ G+DE GP +Y VD+ G
Sbjct: 70 IQVECSLYEMRRGRTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFDEGGPSVYSVDAMG 129
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
G + + GSGSP+AYGVL+ Y+ DM+ EEA +LA RA+ A RDA SG
Sbjct: 130 GATREEEIVATGSGSPFAYGVLEDQYRPDMTEEEAKDLAIRAVRSAMRRDAGSG 183
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ +F+ GV++A++ RA+MG IS+++ KKI +I P + T AGG D Q R
Sbjct: 9 KGTTTVGIVFETGVVLASEKRATMGYLISNKTAKKIYQIAPRIGLTTAGGVGDAQQLARL 68
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ ++ L+E+ +RISV AS LL+NIL+ R V +I G DETGP L+ VD+ G
Sbjct: 69 MTVEANLYEIRRGKRISVQAASTLLSNILHGNRMFPFYVQLLIGGVDETGPVLFSVDAVG 128
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G K + GSGSP AYGVL+ Y M A ELA RA+ A RDA SG +V
Sbjct: 129 GTGKEDGIVATGSGSPMAYGVLEDRYTLGMDERSAIELAIRALRSAIKRDAGSGEGVAVV 188
Query: 233 YVGPNGWKKLSGDDVGEL 250
+ + + +LS +++ L
Sbjct: 189 VITEDSYHELSDEEISVL 206
>gi|410672077|ref|YP_006924448.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
gi|409171205|gb|AFV25080.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
Length = 210
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 124/202 (61%), Gaps = 1/202 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTT+ + +GV++A + RA+MG I+S++ KKI +I+ + T AG D Q
Sbjct: 5 KYLKGTTTVGIVCSDGVVMATEQRATMGHLIASKTAKKIYQIDDFAAMTTAGSVGDAQQI 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ +L+++ K +++ G + +L+N+L R L V ++ G+D+ GP LY +D
Sbjct: 65 VRIISVESKLYKMRRKESMTIKGLTTMLSNLLSGQRYYPLMVQLLVGGYDKHGPELYSID 124
Query: 171 SEGGRLKGTR-FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
+ GG + R + GSGSP AYGVL+ YK +M+ +E ELA RA+++A RD+ASG
Sbjct: 125 ALGGNIDEKRVVATGSGSPIAYGVLEDRYKENMTTQEGVELAVRALHNAMKRDSASGDGI 184
Query: 230 SVYYVGPNGWKKLSGDDVGELH 251
V + + + +L +DV ++
Sbjct: 185 DVVIITKDQFTRLELEDVKKVR 206
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
D + +LK GTTT+ FI K V++AAD RA+ G I+S++VKKI++I Y T+AG
Sbjct: 5 DKENSLKAFHGTTTVGFITKNAVILAADKRATAGTLIASRTVKKIVKITDYAAMTIAGLV 64
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
AD Q + + RL+E NKR+++V G + LLAN+L+S + V ++ G+D T P
Sbjct: 65 ADAQMLADAIREEARLYETMNKRKLTVKGMATLLANVLFSTKYYPYLVQLIVGGYD-TEP 123
Query: 165 GLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAA 224
LY +D G + S GSGSP A GVL+ Y+ D+S+EEA LA +AI A RD+A
Sbjct: 124 RLYNLDYFGSITEEKMTSTGSGSPVALGVLEKDYRPDLSLEEAMNLAAKAIKVAIMRDSA 183
Query: 225 SGGVASVYYVGPNGWKK 241
+G V + G ++
Sbjct: 184 TGDGVDVIAISSGGIRE 200
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 121/200 (60%), Gaps = 1/200 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
+H KGTTT+ + V++A + RA+MG +I+S++ KKI +I+ + T AG D Q
Sbjct: 6 QHLKGTTTVGIACSDAVVLATERRATMGNFIASKTAKKIYQIDDRIGMTTAGSVGDAQQI 65
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ +L ++ I++ G + LL+N+L R L V ++ G D+TGP +Y +D
Sbjct: 66 VRIISVESKLFKMRRNEPITIKGITTLLSNLLSGQRYFPLMVQLIVGGVDKTGPNMYSLD 125
Query: 171 SEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
GGR++ T + GSGSP YG+L+ Y DM+ +E AELA RA+++A RD+ASG
Sbjct: 126 PLGGRIEETNIVATGSGSPITYGLLEDRYHKDMTSDEGAELAIRALHNAMKRDSASGDGI 185
Query: 230 SVYYVGPNGWKKLSGDDVGE 249
V + +G+K+L ++V
Sbjct: 186 DVVVITKDGYKQLDEEEVNN 205
>gi|219851431|ref|YP_002465863.1| proteasome beta-type subunit [Methanosphaerula palustris E1-9c]
gi|302595895|sp|B8GG66.1|PSB_METPE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|219545690|gb|ACL16140.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
palustris E1-9c]
Length = 211
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 116/191 (60%), Gaps = 1/191 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ +FK+G+++A + RA+MG I+S+ KK+ ++ + T AGG D Q R
Sbjct: 8 KGTTTIGIVFKDGIILATEKRATMGSMIASKRAKKVYQVADRIGMTTAGGVGDAQQLARI 67
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ ++C L+++ R ISV +S LL+N L RG V ++ G D TGP +Y VD+ G
Sbjct: 68 MSVECNLYQIRRGRSISVGASSTLLSNYLNQNRGYPYYVQLLVGGVDATGPSVYSVDAMG 127
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G + + + GSGSP AYGVL+ YK D++ +EA ELA RA+ A RD+ASG V
Sbjct: 128 GATRESDIVATGSGSPMAYGVLEDRYKKDLTEDEAIELAIRALRAAMRRDSASGEGIHVV 187
Query: 233 YVGPNGWKKLS 243
+ + + +LS
Sbjct: 188 IITKDAYSELS 198
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTT+ + +G+++A++ RA+MG +I+S++ KK+ +I+ + T AG D Q
Sbjct: 5 KYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQL 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ +L+++ +++ G + L++N L + R + V +I G D+ GP +Y +D
Sbjct: 65 VRLVSVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDKNGPAIYSLD 124
Query: 171 SEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
GG ++ TR S GSGSP AYGVL+ Y+ D++++E +LA RAI++AT RD+ASG
Sbjct: 125 PMGGSIEETRISATGSGSPMAYGVLEDQYREDIAVKEGLDLAIRAIHNATKRDSASGENI 184
Query: 230 SVYYVGPNGWKKLSGDDV 247
V + +K+L ++V
Sbjct: 185 DVVVITKEAFKRLDPEEV 202
>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 209
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 116/195 (59%), Gaps = 1/195 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ K+GV+ A ++RA+MG I+ + KI +I+ ++ T+AG +D Q +
Sbjct: 8 KGTTTVGLTCKDGVVFATETRATMGNLIAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKY 67
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ + L L N +RI+V A+ L +NIL+S RG V T++ G D+ GP LY +D G
Sbjct: 68 IRAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGVDDKGPALYSLDPTG 127
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G +K S GSGSP AYGVL+ Y D+ +EE ++A RAI A RDA SG V
Sbjct: 128 GVIKDLMISTGSGSPVAYGVLEDRYSEDLYVEEGIDVAIRAIKSAMERDAYSGNSILVAT 187
Query: 234 VGP-NGWKKLSGDDV 247
+ G+KKLS ++V
Sbjct: 188 ITEAEGFKKLSEEEV 202
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
Length = 210
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTT+ + +G+++A++ RA+MG +I+S++ KK+ +I+ + T AG D Q
Sbjct: 5 KYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQL 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ +L+++ +++ G + L++N L + R + V +I G D+ GP +Y +D
Sbjct: 65 VRLVSVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDKNGPAIYSLD 124
Query: 171 SEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
+ GG ++ TR S GSGSP AYGVL+ YK D++++E +LA RAI++A RD+ASG
Sbjct: 125 AMGGSIEETRISATGSGSPMAYGVLEDQYKEDIAVKEGLDLAIRAIHNAMKRDSASGENI 184
Query: 230 SVYYVGPNGWKKLSGDDV 247
V + +K+L ++V
Sbjct: 185 DVVVITKEAFKRLDPEEV 202
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + K+G++ A++ RA++G I+ ++V KI +I+ ++ T+AG D Q
Sbjct: 8 KGTTTVGIVCKDGIVFASEKRATLGNLIAHKAVDKIFKIDEHLATTVAGSVGDAQKLVEY 67
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L + RL++L + +V A+ + +NIL++ R V +I G DETGP +Y VD G
Sbjct: 68 LKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGIDETGPKIYSVDPAG 127
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVY 232
G+++ S GSGSP AYGVL+ YK DMS+E+A +A RAI +T RD SG G++
Sbjct: 128 GKIEDKYVSTGSGSPIAYGVLEDRYKKDMSVEDAINIALRAIKSSTKRDTFSGDGISLAV 187
Query: 233 YVGPNGWKKL 242
G+K+
Sbjct: 188 VTEKEGFKRF 197
>gi|239788857|dbj|BAH71087.1| ACYPI000065 [Acyrthosiphon pisum]
Length = 176
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Query: 25 LSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
L P ++ + T D + + H GTTTL F+++ G+++A DSRA+ G YI SQ
Sbjct: 44 LPGNPVENMRMITARDTMGRPIELNFHH--GTTTLGFLYQGGIVLAVDSRATGGQYIGSQ 101
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYS 144
+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISVT ASK+++N++Y
Sbjct: 102 CMKKIVEINDFMLGTLAGGAADCVYWDRVLSKQCRLHELRNKERISVTAASKIMSNMIYY 161
Query: 145 YRGMGLSVGT 154
Y+G GLS+G
Sbjct: 162 YKGYGLSIGN 171
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 121/201 (60%), Gaps = 1/201 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K KGTTT+ + K+GV++A + RA+MG +I+S+ KKI I + T AG D QF
Sbjct: 8 KVYKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYRIADRVAMTTAGAVGDAQFL 67
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ +L+E+ + + +V + LL+NIL S R V ++ G D+ GP +Y +D
Sbjct: 68 ARLISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRWFPYFVQLLVGGVDKRGPSIYSID 127
Query: 171 SEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
GG ++ + GSGSP AYGVL+ Y ++++++ ELA RAIY A RD+ASG
Sbjct: 128 LLGGAIEEIDIVATGSGSPTAYGVLEDRYTPEITVDDGVELAVRAIYSAMRRDSASGDGI 187
Query: 230 SVYYVGPNGWKKLSGDDVGEL 250
V + +G+ +LS ++V ++
Sbjct: 188 DVVKITKDGYFELSKEEVDKI 208
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 115/187 (61%), Gaps = 1/187 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ I + V++AAD RA+ G I+S+ VKKI+ ++ Y+ T++G AD Q L
Sbjct: 25 GTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDVL 84
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ RL+E+ NK + SV + LL+NIL+S + V ++ G+D T P LY +D G
Sbjct: 85 REEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYD-TQPRLYTLDLFGS 143
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ + GSGSP AYGVL+ Y+ D+S+EEA ++A AI A RDAASG A V +
Sbjct: 144 ITEDKYTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAASGDGADVVVI 203
Query: 235 GPNGWKK 241
GP G+++
Sbjct: 204 GPQGYEE 210
>gi|260798452|ref|XP_002594214.1| hypothetical protein BRAFLDRAFT_117625 [Branchiostoma floridae]
gi|229279447|gb|EEN50225.1| hypothetical protein BRAFLDRAFT_117625 [Branchiostoma floridae]
Length = 113
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
MGLS+GTMI GWD+ GPGLYYVDS+G RL FSVGSGS YAYGVLDSGY +DM +EEA
Sbjct: 1 MGLSMGTMIVGWDKRGPGLYYVDSDGTRLSNNMFSVGSGSTYAYGVLDSGYSWDMGVEEA 60
Query: 208 AELARRAIYHATFRDAASGGVASV-YYVGPNGWKKLSGDDVGELHYHY 254
EL +RAIYHAT R + ++V Y++ GW K+S DV +LHY Y
Sbjct: 61 YELGKRAIYHATHRTLTAAVWSTVMYHMKETGWIKVSQTDVMDLHYKY 108
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 116/195 (59%), Gaps = 1/195 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + K+GV++A + RA+MG +I+S+ KKI +I + T AG D QF R
Sbjct: 8 KGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFLARL 67
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ ++ L+ + + +V + L++N+L S R V +I G D+TG +Y +D G
Sbjct: 68 IKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGVDKTGAKIYSIDPIG 127
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G ++ + GSGSP AYGVL+ Y+ D++++EA ELA RAIY A RD+ASG V
Sbjct: 128 GAIEEIDIVATGSGSPMAYGVLEDNYRKDINVDEAVELAIRAIYSAMKRDSASGDGIDVV 187
Query: 233 YVGPNGWKKLSGDDV 247
+ + +L+ +++
Sbjct: 188 KITEKEYVELTPEEI 202
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 105/177 (59%), Gaps = 1/177 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K KGTTT+ I +GV++A + RA+MG +I+S+ +KI I T+AG D Q
Sbjct: 5 KQYKGTTTIGIICDQGVVLATERRATMGNFIASRDAQKIYRITDNAAMTIAGSVGDGQRL 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R L ++ +L EL +S+ S LL+NIL R V +I G D+ GP +Y +D
Sbjct: 65 ARILQVEAKLFELRRHGSMSINALSMLLSNILAEMRYAPYYVQVLIGGLDKAGPKIYSLD 124
Query: 171 SEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
GGR++ +F S GSGSP AYGVL+ YK MS+EE ELA RA+ A RD+ASG
Sbjct: 125 PLGGRIEEEKFVSTGSGSPIAYGVLEDRYKPGMSVEEGVELAARALESAMKRDSASG 181
>gi|170063525|ref|XP_001867141.1| proteasome subunit beta type 5,8 [Culex quinquefasciatus]
gi|167881115|gb|EDS44498.1| proteasome subunit beta type 5,8 [Culex quinquefasciatus]
Length = 290
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 116/199 (58%), Gaps = 33/199 (16%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKAT---LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
A P F P + + + Q D +++ + GTTTL F+F+ V++A DSRA+ G +I S
Sbjct: 22 AVPLFHKP-AENLVKLQDDGESSSIKMDFDHGTTTLGFLFQGEVILAVDSRATGGQFIGS 80
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY 143
Q+VKKI+EIN Y+LGT+A GAADC K+++N +Y
Sbjct: 81 QTVKKIVEINEYLLGTLADGAADC---------------------------VKIMSNSVY 113
Query: 144 SYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 203
Y+GMG+S+ M+AG+D+ GP L Y+DSEG R + SV SGS Y YGVL G D+S
Sbjct: 114 YYKGMGISMRMMLAGYDKHGPQLCYIDSEGTRTP-CKVSV-SGSIYTYGVLGFGDWSDLS 171
Query: 204 IEEAAELARRAIYHATFRD 222
++A +L R AIYH T D
Sbjct: 172 DDDAHDLGRHAIYHVTHLD 190
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 118/194 (60%), Gaps = 3/194 (1%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
+GTTT+ K+GV+ A++ RASMG ++ + +KI +I+ ++ T+AG AD Q +
Sbjct: 8 EGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKIDNHIAATIAGSVADAQTLMKV 67
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ + L+ L N + IS+ A+ + +NIL+S V T+I G D+TG +Y +D+ G
Sbjct: 68 ISAETSLYRLRNGKDISLEAAAAVSSNILHSSPAY---VQTLIGGVDDTGASIYSLDAAG 124
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G +K T S GSGS +AYGVL+ + D+++EEA E+A RAI AT RD SG V
Sbjct: 125 GMIKDTFISTGSGSTFAYGVLEDRFYEDITVEEATEVAIRAIKAATERDTFSGNGFLVAN 184
Query: 234 VGPNGWKKLSGDDV 247
V +G+K L ++V
Sbjct: 185 VTKDGFKMLEKEEV 198
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 115/199 (57%), Gaps = 2/199 (1%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ I + V++A D RASMG I+ + KK+ +I+ Y+ T+AG D Q R
Sbjct: 5 KGTTTVGLICDDAVILATDKRASMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRA 64
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
L + RL+++ + IS + LL+NIL+S R +I G+D T GP L+ +D
Sbjct: 65 LIAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDLTDGPKLFSLDPL 124
Query: 173 GGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG + F S GSGSP AYGVL++ Y DMSIEE +LA +A+ A RD SG SV
Sbjct: 125 GGMNEEKTFTSTGSGSPIAYGVLEAEYDRDMSIEEGLKLALKALKSAMERDTYSGNGVSV 184
Query: 232 YYVGPNGWKKLSGDDVGEL 250
+ G K LS +++ +L
Sbjct: 185 AVITKEGVKLLSDEEITKL 203
>gi|379994196|gb|AFD22725.1| proteasome subunit beta type 5, partial [Collodictyon triciliatum]
Length = 141
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 82/110 (74%), Gaps = 6/110 (5%)
Query: 29 PSFSLPLSTDFDEFQKD------TKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
PSFSL + + ++ + L+ KGTTTLAFI+ G++VA DSRA+ GG+I+
Sbjct: 32 PSFSLAQTANPADYLNEAYGASEVARKLEFNKGTTTLAFIYDRGIVVAVDSRATQGGFIA 91
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVT 132
SQSVKK+IEINPY+LGTMAGGAADC+FW R+LG CRL+EL NK RISV+
Sbjct: 92 SQSVKKVIEINPYLLGTMAGGAADCKFWERDLGRICRLYELRNKERISVS 141
>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
Length = 207
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 108/178 (60%), Gaps = 1/178 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K KGTTT+ I GV+ A + RA+MG +I+S+ +KI ++ + T+AG D Q
Sbjct: 4 KQYKGTTTVGIICNNGVVFATERRATMGTFIASRDAQKIYKLTDNIAMTIAGSVGDGQRL 63
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R L ++ +L EL +S+ S LL+NIL + M V +I G D++GP +Y +D
Sbjct: 64 ARILQVEAKLFELRRHGPMSINALSMLLSNILAETKYMPFYVQVLIGGVDKSGPRIYSLD 123
Query: 171 SEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGG 227
GGR++ +F S GSGSP AYGVL+ YK D+S+E+ ELA +A+ A RD+ASG
Sbjct: 124 PLGGRIEEVKFSSTGSGSPIAYGVLEDRYKPDISVEQGVELAAKALESAMKRDSASGN 181
>gi|402594536|gb|EJW88462.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 151
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 91/135 (67%)
Query: 120 LHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGT 179
++EL K I+V ASK N+LYSYR GLSVG+MIAG+D+ GP ++ VDSEG R++
Sbjct: 1 MYELREKTEITVAAASKYFQNVLYSYRNHGLSVGSMIAGYDKRGPAIFKVDSEGQRIQLR 60
Query: 180 RFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGW 239
S+GSGS AYG+LD+ Y+ M+ EEA +L RR I HAT+RD SGGV ++ ++ P
Sbjct: 61 LCSIGSGSLSAYGILDNFYQPKMTDEEAYKLGRRGIMHATYRDTGSGGVCNMVHISPTEK 120
Query: 240 KKLSGDDVGELHYHY 254
+ DV +L+Y +
Sbjct: 121 IRFPAFDVSQLYYEF 135
>gi|169625204|ref|XP_001806006.1| hypothetical protein SNOG_15869 [Phaeosphaeria nodorum SN15]
gi|160705619|gb|EAT76707.2| hypothetical protein SNOG_15869 [Phaeosphaeria nodorum SN15]
Length = 227
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 114/231 (49%), Gaps = 59/231 (25%)
Query: 23 PELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYIS 82
P ++ + S+ ++ D+ + +K A GTTTLAF FK G++VA DSRA+ G +I+
Sbjct: 40 PPVAQSASWLRAMTDDY----SNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIA 95
Query: 83 SQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL 142
SQ+VKK+IEIN C L
Sbjct: 96 SQTVKKVIEIN-----------------------NCLL---------------------- 110
Query: 143 YSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 202
GTM G GP LYY+DS+G RL G F VGSG +AYGVLD+ YK+D+
Sbjct: 111 ----------GTMAGGAAVQGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYKYDL 160
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH 253
++A EL RR+I AT RDA SGG ++Y+V +GW K D + +
Sbjct: 161 EDDDALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIFWE 211
>gi|435851174|ref|YP_007312760.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661804|gb|AGB49230.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 210
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTT+ + +GV++A + RA+MG +I+S++ KKI +I+ + T AG D Q
Sbjct: 5 KYLKGTTTVGIVCDKGVVLATERRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQI 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + ++ L+++ K +++ G + LL+NIL R L V ++ G D+ GP ++ +D
Sbjct: 65 VRVMSVESHLYKMRRKEPMTIKGITTLLSNILSGQRYYPLMVQLLVGGVDKNGPAIFSLD 124
Query: 171 SEGGRLKGTR-FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
+ GG ++ T+ + GSGSP AYGVL+ + +SIEE ELA RA+++A RD+ASG
Sbjct: 125 ALGGTIEETKAVATGSGSPMAYGVLEDRFVDGLSIEEGVELAIRALHNAMKRDSASGNGI 184
Query: 230 SVYYVGPNGWKKL 242
V + + + +L
Sbjct: 185 DVVVITADKFDRL 197
>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
gi|302595754|sp|D1Z199.1|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
Length = 205
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K KGTTT+ I G+++A + RA+MG I+S+ +KI ++ + T+AG D Q
Sbjct: 4 KQYKGTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDNIAMTIAGSVGDGQRL 63
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R L + +L EL +S+ S LL+N+L+ YR + V ++ G D++GP L+ +D
Sbjct: 64 ARMLQAESKLFELRRHGPMSINALSMLLSNLLWEYRIFYIQV--LVGGVDKSGPKLFSLD 121
Query: 171 SEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
GGR+ +F S GSGSP AYGVL+ YK DMS+E+ ELA +A+ A RD+ASG
Sbjct: 122 PAGGRITEVKFSSTGSGSPLAYGVLEDRYKQDMSVEQGVELAAKALESAMKRDSASGNGM 181
Query: 230 SVYYVGP 236
+ P
Sbjct: 182 QFCVITP 188
>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 125/220 (56%), Gaps = 18/220 (8%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K KGTTT+ + K+GV++A + RA+MG +I+S++ KKI +I M T AG D QF
Sbjct: 7 KIYKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFL 66
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
R + I+ L+E+ +R+ +V + L +N+L SYR V +I G D G +Y +D
Sbjct: 67 ARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSID 126
Query: 171 SEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GV 228
GG ++ + GSGS AYGVL+ + ++ ++EA ELA RAIY A RD+ASG G+
Sbjct: 127 PIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGI 186
Query: 229 ASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268
V K++ D+ +Y +P VEQ +A+
Sbjct: 187 DVV---------KITEDE-------FYQYSPEEVEQILAK 210
>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
gi|302595840|sp|A3CUS9.1|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanoculleus marisnigri
JR1]
Length = 214
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 111/189 (58%), Gaps = 1/189 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ IF GV++A + RA+MG I+S+ KKI +I P + T AGG D Q R
Sbjct: 10 KGTTTVGLIFDGGVVLATEMRATMGNMIASKRAKKIYQITPRIGLTTAGGVGDAQQLVRI 69
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L ++C L E+ + +SV AS LL+N L R V ++ G+D+ GP +Y VD+ G
Sbjct: 70 LQVECNLFEMRRGKTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFDDEGPSVYSVDAMG 129
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G K + GSGSP+AYGVL+ Y+ M ++A +LA RA+ A RD+ASG V
Sbjct: 130 GATKEEDIVATGSGSPFAYGVLEDQYRAGMKEDDAKDLAVRAVRSAMRRDSASGEDIMVV 189
Query: 233 YVGPNGWKK 241
+ + +++
Sbjct: 190 VITKDKYEE 198
>gi|149043358|gb|EDL96809.1| proteosome (prosome, macropain) subunit, beta type 8, isoform CRA_b
[Rattus norvegicus]
Length = 206
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 12/150 (8%)
Query: 28 APSFSLPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYI 81
AP +LP EF ++ K ++ A GTTTLAF F+ GV+VA DSRAS G YI
Sbjct: 39 APELALPRGMQPTEFLRSFGDDQERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI 98
Query: 82 SSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANI 141
++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N+
Sbjct: 99 ATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNM 158
Query: 142 LYSYRGMGLS------VGTMIAGWDETGPG 165
+ L + + W GPG
Sbjct: 159 MLQSTERPLCDHCWADILPALRSWQTQGPG 188
>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
Length = 212
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 1/189 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ +F EG+++A + RA+MG I+S++ KK+ +I + T AGG D Q R
Sbjct: 10 KGTTTVGLVFDEGIVLATEKRATMGTLIASKTAKKVYQIADRIGMTTAGGVGDAQSLARL 69
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ ++C L+++ + + ISV A+ LL+N L R V ++ G D GP +Y VD+ G
Sbjct: 70 MQVECSLYKVRHGKPISVGAAATLLSNYLQQNRYYPYYVQLLVGGVDRNGPSVYSVDAMG 129
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G K T S GSGSP AYGVL+ Y DM+ EA +LA R++ A RD+ASG S+
Sbjct: 130 GASKETDIVSTGSGSPMAYGVLEDRYHADMNEPEAVDLATRSLKAAMRRDSASGENISIV 189
Query: 233 YVGPNGWKK 241
+ + +++
Sbjct: 190 VITRDKYEE 198
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ I K+G+++A + RA++G YI+S+ KKI ++ + T AG D QF R
Sbjct: 10 KGTTTVGLICKDGIVLATEKRATIGNYIASRRAKKIYQVADRVAMTTAGSVGDAQFLARL 69
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ ++ L+E + + +V + +L+N+L S R V +I G D+ GP ++ +D G
Sbjct: 70 VKVEASLYETRKEEKPTVKAIATMLSNLLNSSRYFPYFVQLLIGGVDKRGPSMFSIDPIG 129
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G ++ T + GSGSP AYGVL+ Y +++ +E ELA RAI A RD+ASG V
Sbjct: 130 GAIEETDIVATGSGSPTAYGVLEDRYYPEITTQEGVELAIRAITSAMKRDSASGDGIDVV 189
Query: 233 YVGPNGWKKLSGDDVGEL 250
+ + + +L+ ++V E+
Sbjct: 190 KITKDEYVQLTPEEVDEI 207
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 112/194 (57%), Gaps = 1/194 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ +F GV++A + RA+MG I+S+ KK+ +I + T+AGG D Q R +
Sbjct: 11 GTTTVGLVFAGGVILATEKRATMGYMIASKRAKKVYQIADRIGMTIAGGVGDAQQLARII 70
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
++C L+++ R I+V AS LL+N L R V ++ G D+ GP +Y VD+ GG
Sbjct: 71 TVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPYYVQLLVGGIDDHGPSVYSVDAMGG 130
Query: 175 RLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
K S GSGSP AYGVL+ Y+ M+ +EA ELA RA+ A RDA SG V
Sbjct: 131 ATKEEDIVSTGSGSPMAYGVLEDRYRPGMNEDEAVELAVRALRSAMKRDAGSGEGIHVVV 190
Query: 234 VGPNGWKKLSGDDV 247
+ + ++ +S + +
Sbjct: 191 ITKDRYENVSEETI 204
>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
Length = 213
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 5/207 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ + ++ V++A++ RA+MG I+S+ KKI +I + T AGG D Q R +
Sbjct: 11 GTTTVGLVLRDAVVLASEMRATMGYLIASKKAKKIYQIADRIGMTTAGGVGDAQQIARLM 70
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
++C L+++ R I++ + LL+NIL + R V ++ G DE GP LY VD+ GG
Sbjct: 71 TVECSLYQIRRGRPITIGAVATLLSNILNANRYYPFYVQLLVGGVDEGGPKLYAVDALGG 130
Query: 175 RLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
+ + GSGSP A+GVL+ Y D+S +EA LA RAI A RDA SG V
Sbjct: 131 ASREEEMVATGSGSPMAFGVLEDRYSKDLSEDEAVALAVRAIRSAMKRDAGSGEGIHVVV 190
Query: 234 VGPNGWKKLSGDDVGELHYHYYPVTPS 260
+ +++L+ ++ L PV+P+
Sbjct: 191 ITKEAYRELTESEIAGLS----PVSPA 213
>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 202
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 122/215 (56%), Gaps = 18/215 (8%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ + K+GV++A + RA+MG +I+S++ KKI +I M T AG D QF R +
Sbjct: 1 TTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIK 60
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
I+ L+E+ +R+ +V + L +N+L SYR V +I G D G +Y +D GG
Sbjct: 61 IEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGGA 120
Query: 176 LKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVYY 233
++ + GSGS AYGVL+ + ++ ++EA ELA RAIY A RD+ASG G+ V
Sbjct: 121 IEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVV-- 178
Query: 234 VGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268
K++ D+ +Y +P VEQ +A+
Sbjct: 179 -------KITEDE-------FYQYSPEEVEQILAK 199
>gi|304315325|ref|YP_003850472.1| proteasome, subunit beta [Methanothermobacter marburgensis str.
Marburg]
gi|302588784|gb|ADL59159.1| predicted proteasome, subunit beta [Methanothermobacter
marburgensis str. Marburg]
Length = 210
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K KGTTT+ K+GV+ A + RASMG I+ ++ KI +I+ ++ T+AG AD Q
Sbjct: 5 KTLKGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSL 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
+ L + L+ + N RIS+ A+ L ANIL+S R V T++ G DETG +Y +D
Sbjct: 65 MKYLKAEAALYRMRNSERISIEAAAALAANILHSSRFYPFIVQTLLGGVDETGAKIYSLD 124
Query: 171 SEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVA 229
GG + S GSGSP AYGVL+ Y ++ +++A ++A RAI A RD SG G+
Sbjct: 125 PSGGMIPDRFVSTGSGSPVAYGVLEDRYADELYVDDAIDIAIRAIKSAMERDTYSGNGIL 184
Query: 230 SVYYVGPNGWKKLSGDDV 247
G++ LS +++
Sbjct: 185 VATVTEEEGFRMLSQEEI 202
>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
Length = 213
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 109/195 (55%), Gaps = 1/195 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ +F +GV++A + RA+MG I+S+ KK+ ++ + T AGG D Q R
Sbjct: 10 KGTTTIGIVFADGVILATEKRATMGLMIASKKAKKVYQVADRIGMTTAGGVGDAQQLARI 69
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L ++C L+++ R I+V + LL+N L R V ++ G DE GP +Y VD+ G
Sbjct: 70 LNVECNLYQIRRSRPITVGATATLLSNYLNQNRYFPYYVQLLVGGVDEKGPSVYSVDAMG 129
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G K + GSGSP AYGVL+ YK M+ E A E+A R + A RDA SG V
Sbjct: 130 GATKEEEIVATGSGSPMAYGVLEDRYKPGMTEEMAIEIAVRGLKSAMKRDAGSGEGIHVV 189
Query: 233 YVGPNGWKKLSGDDV 247
+ + ++ L D +
Sbjct: 190 AITKDKFQTLGEDTI 204
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ +F GV++A + RA+MG I+S+ KK+ I + T+AGG D Q R +
Sbjct: 11 GTTTVGIVFDGGVILATERRATMGNLIASKKAKKVHAITDKIGMTIAGGVGDAQQLVRII 70
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
++C L+E+ ++ISV A+ +L+N L R V ++ G D +GP +Y VD+ GG
Sbjct: 71 NVECNLYEIRRGQKISVGAAATILSNYLNQNRFSPYYVQLLVGGVDTSGPSVYSVDAAGG 130
Query: 175 -RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
L+ S GSGS AYGVL+ +K +M+ EEA ELA RA+ A RD+ASG +V
Sbjct: 131 ATLEENFVSTGSGSLTAYGVLEDRFKPNMTEEEAIELAVRALRAAMLRDSASGEGYNVVI 190
Query: 234 VGPNGWKKLSGDDV 247
+ ++ L D +
Sbjct: 191 ITQEKFEYLPEDKI 204
>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
Length = 212
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 1/194 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L+ KGTTT+ +F++ V++AAD RA+ G +++ + KKII+I YM T AG AD Q
Sbjct: 10 LRALKGTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQM 69
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
L +E+ NKRR+S+ A++ L+ IL+S + V ++ G+D T P LY +
Sbjct: 70 LAEWLANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGGYD-TQPRLYNI 128
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D G + + GSGSP A GV++ Y ++S+EEA ELA+RA+ + RD +G
Sbjct: 129 DWFGSVTEEKYVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFTGNGV 188
Query: 230 SVYYVGPNGWKKLS 243
V +G + +++ S
Sbjct: 189 DVVVIGKDFYREYS 202
>gi|333988299|ref|YP_004520906.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
SWAN-1]
gi|333826443|gb|AEG19105.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. SWAN-1]
Length = 207
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 109/195 (55%), Gaps = 4/195 (2%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ K+G++ A + RA+MG ++ + +KI +I+ ++ T+AG + Q +
Sbjct: 8 KGTTTVGLTCKDGIVFATERRATMGNLVAHKVAEKIFKIDDHIGATIAGSVSHAQVLMKY 67
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ + L+ L N ISV A+ L ANIL+S L V T++ G D GP LY +D G
Sbjct: 68 ISAEVALYRLRNGAIISVEAAATLTANILHSSP---LYVQTLLGGVDNKGPSLYSLDPSG 124
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVY 232
G +K S GSGSP AYGVL+ Y DM ++E + A RAI A RD SG G+
Sbjct: 125 GVMKDMMISTGSGSPMAYGVLEDRYNEDMYVDEGIDTAIRAIKSAMERDTFSGNGILVAT 184
Query: 233 YVGPNGWKKLSGDDV 247
G+K LS ++V
Sbjct: 185 ITAEEGFKMLSAEEV 199
>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP6]
gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP6]
Length = 206
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + GV++A++SRA+MG +I+S KKI +I+ + T AGG D Q R
Sbjct: 6 KGTTTVGVLCDGGVVLASESRATMGSFIASSQAKKIYQIDDLVGMTTAGGVGDAQSLVRM 65
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ ++ RL+++ ++V + +LANIL S R V ++ G D GP +Y +D+ G
Sbjct: 66 VQVEARLYKMQRGEGLTVKAVTTMLANILSSRRYYPFMVQLIMGGVDRYGPRIYSLDALG 125
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
G+++ R + GSGSP AYGVL++ YK +S+E+ LA RAI++A RD+ASG
Sbjct: 126 GQIEERRIVATGSGSPVAYGVLEAMYKPGISVEDGTVLAARAIHNALKRDSASG 179
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ K+G++ A + RASMG I+ + KI +I+ ++ T+AG +D Q
Sbjct: 8 KGTTTVGVTCKDGIVFATERRASMGNLIAHKVADKIFKIDDHIGATIAGSVSDAQKLMGY 67
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ + L+ L N +SV A+ + +NIL++ R V T++ G DE GP L+ +D G
Sbjct: 68 ISAEVALYRLRNGAPMSVEAAANMTSNILHASRFYPYYVQTLLGGVDEKGPALFSLDPSG 127
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVY 232
G +K S GSGSP AYGVL+ Y +M IEE + RAI A RD SG G+
Sbjct: 128 GVIKDLMISTGSGSPVAYGVLEDRYNQEMDIEEGTSVVIRAIKAAMERDTYSGNGIKVAT 187
Query: 233 YVGPNGWKKLSGDDVGE 249
G+K L D+V +
Sbjct: 188 ITKEEGFKILPDDEVAK 204
>gi|374628281|ref|ZP_09700666.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906394|gb|EHQ34498.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 206
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ +F GV++A + RA+MG I+S+ KK+ +I + T+AGG D Q R
Sbjct: 10 KGTTTVGLLFDGGVVLATERRATMGNMIASKKAKKVYQIADRIGMTIAGGVGDAQQLARL 69
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ ++C L + R I+V A+ LL+N+L R V ++ G D GP +Y VD+ G
Sbjct: 70 MQVECSLFNIRRGRPIAVGAAATLLSNVLNQNRMFPYYVQLLVGGIDRYGPSIYSVDALG 129
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G R + GSGSP+AYGVL+ ++ MS +E +LA RA+ A RD+ASG S+
Sbjct: 130 GASPEDRIVATGSGSPFAYGVLEDRFEEGMSEKECLDLAIRALRSAMKRDSASGEDISIV 189
Query: 233 YVGPNGWKKL 242
+ + +++L
Sbjct: 190 VITKDKYEEL 199
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ I K+ V++AAD RAS+G I+ ++ KKI +I+ + T+AG D Q R
Sbjct: 4 KGTTTIGLICKDAVILAADKRASLGNLIADKNAKKIYKIDDNLALTIAGSVGDAQSLVRY 63
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L + +L+ + + +S + LL+NIL+S R V ++ G+DE G LY +D G
Sbjct: 64 LTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQMIVGGFDEKGFKLYSLDPLG 123
Query: 174 GRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G + F+ GSGSP AYGVL++GYK DM ++ L +A+ A RD SG S+
Sbjct: 124 GVNEEKDFTATGSGSPIAYGVLEAGYKKDMDYKKGVSLVLKALQAAMERDTFSGNGVSLA 183
Query: 233 YVGPNGWKKLSGDDVGEL 250
+ +G K D++ +L
Sbjct: 184 LITKDGVKIYEDDEIKKL 201
>gi|15679213|ref|NP_276330.1| proteasome subunit beta [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6685781|sp|O27270.1|PSB_METTH RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2622311|gb|AAB85691.1| proteasome, beta subunit [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 210
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 112/195 (57%), Gaps = 1/195 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ K+GV+ A + RASMG I+ ++ KI +I+ ++ T+AG AD Q +
Sbjct: 8 KGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKY 67
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L + L+ + N +IS+ A+ L ANIL+S R V T++ G DE G +Y +D G
Sbjct: 68 LKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENGAKIYSLDPSG 127
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVY 232
G + S GSGSP AYGVL+ Y ++ ++EA ++A RAI A RD SG G+
Sbjct: 128 GMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVAT 187
Query: 233 YVGPNGWKKLSGDDV 247
G++ LS +++
Sbjct: 188 VTEEEGFRMLSEEEI 202
>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
Length = 210
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 115/199 (57%), Gaps = 1/199 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ I E V++A++ RA+MG +I+S++ KKI ++ + T AG D Q R
Sbjct: 9 KGTTTIGLICGESVVLASEKRATMGSFIASKTAKKIYLVDDRIAMTTAGIVGDAQALVRI 68
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ ++ +L+++ ++V G S LL+N++ R V +I G D G LY +D G
Sbjct: 69 MTVELQLYKIRRNEPMTVKGISTLLSNVMNGQRYYPYIVQLLIGGIDRDGAHLYTIDPFG 128
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G + + + GSGSP AYGVL++ Y D+S+E+ LA +A+Y A RD+ASG V
Sbjct: 129 GNTEESEIAATGSGSPIAYGVLENKYTKDISLEKGTALAIQALYSAIKRDSASGEAIEVV 188
Query: 233 YVGPNGWKKLSGDDVGELH 251
+ + ++ LS + + EL
Sbjct: 189 TITKDRYESLSEEKIKELR 207
>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 206
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K A TTT+ + E V++AAD RA+ G + + V+KI+EI PY T++G AD QF
Sbjct: 3 KTASKTTTVGLVAGEYVVLAADKRATAGPMVYHKRVRKIMEITPYAAMTISGLVADAQFL 62
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSY-RGMGLSVGTMIAGWDETGPGLYYV 169
N + +EL +RIS+ + ++ IL +Y R V ++ G D GP LYY+
Sbjct: 63 VENAKYIAKDYELKMGKRISIDALASRISLILSAYLRFSPFIVQLLLGGVDHEGPKLYYM 122
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D G + S GSGSP A+GVL+ GY+ +++EEA ELA +A+ A RD+ +G
Sbjct: 123 DLYGSVSRERFMSTGSGSPVAFGVLEQGYREGLTLEEAKELAFKAVSSAIMRDSFTGEGV 182
Query: 230 SVYYVGPNG 238
+ +GP G
Sbjct: 183 DIVVIGPEG 191
>gi|226358525|gb|ACO51115.1| proteasome subunit beta type-8 precursor [Hypophthalmichthys
nobilis]
Length = 87
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 71/86 (82%)
Query: 67 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 126
VMVA DSRAS G Y+S+Q KK+IEINPY+LGTM+G AADC +W R L +CR+++L NK
Sbjct: 1 VMVAVDSRASAGSYVSTQMFKKVIEINPYLLGTMSGSAADCVYWERVLARECRIYKLRNK 60
Query: 127 RRISVTGASKLLANILYSYRGMGLSV 152
RISV+ ASKLLAN++ +YRGMGLS+
Sbjct: 61 ERISVSAASKLLANMVANYRGMGLSM 86
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 116/202 (57%), Gaps = 2/202 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
++ KGTTT+ + K+GV++A D RA+MG I+ + KK+ +I+ Y+ T+AG D Q
Sbjct: 9 EYMKGTTTIGMVCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSL 68
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYV 169
R + + +++++ + + LL+NIL+ R +I G+D GP L+ +
Sbjct: 69 VRMISAETKIYKMRTGNNMPPHSCATLLSNILHGNRHFPFLTQLIIGGYDNLHGPKLFSL 128
Query: 170 DSEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
D GG + T F S GSGSP A GVL++ YK DM+I + ELA +A+ A RDA SG
Sbjct: 129 DPVGGLNEETSFTSTGSGSPTALGVLEAEYKKDMTINKGKELAVKALISAMERDAYSGNG 188
Query: 229 ASVYYVGPNGWKKLSGDDVGEL 250
S+ + NG K S +++ ++
Sbjct: 189 ISLAVIDENGVKIYSDEEIEKM 210
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 109/185 (58%), Gaps = 1/185 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ ++ V++AAD RA+ G +I + V+KI++I+ YM T AG AD Q
Sbjct: 12 KGTTTVGIRSEKAVVLAADKRATAGNFIVHKRVEKIVKISDYMAMTTAGLVADAQVLADV 71
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L ++ + +EL +K+R+SV A+ L+N+L+S R V ++ G+D T P LY +D G
Sbjct: 72 LRMEVKNYELFHKKRMSVKAAATFLSNVLHSARFYPYIVQLLVGGFD-TAPRLYSLDWFG 130
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
+ GSGSP A GV+++ Y +M +EE LA RA++ AT RD ASG V
Sbjct: 131 TVAEEEFLVTGSGSPMAVGVIEAEYNPNMDLEELVNLAVRAVFAATRRDTASGEGIDVAV 190
Query: 234 VGPNG 238
+ NG
Sbjct: 191 IDRNG 195
>gi|123480905|ref|XP_001323441.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121906306|gb|EAY11218.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 216
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 7/197 (3%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K + GTT LA +GV++A+DSR S G +I +++ KI EI P + G AAD QF
Sbjct: 8 KESMGTTLLAIQCTDGVVMASDSRTSSGSFIPNRATNKITEIQPKIFAARCGNAADTQFL 67
Query: 111 HRNLGIKCRLHEL----ANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGL 166
R +K L+ L N ++ AS ++ +++ YR LS G ++ GWD GP +
Sbjct: 68 AR--AVKNYLNALNITRENTDDSTILVASNVIRSLIVRYRQY-LSAGVIVGGWDSAGPQV 124
Query: 167 YYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
Y ++ G +K S GSGS Y +D Y+ DM++EEA + A A+ A RD +SG
Sbjct: 125 YSIEVSGMAIKKKIASNGSGSTYIQAYIDQNYREDMTMEEATKFAIAAVTGAIIRDGSSG 184
Query: 227 GVASVYYVGPNGWKKLS 243
GV ++ + +G K+++
Sbjct: 185 GVVNIVQINADGAKRMT 201
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K +GTTT+ K+GV+ A++ RASMG ++ + +KI +IN +++ T+AG D Q
Sbjct: 4 KILEGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNL 63
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
+ + + L+++ N +ISV A+ + ANIL R + V T++ G D P LY +D
Sbjct: 64 MKIIEAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMDGDKPSLYSLD 120
Query: 171 SEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVAS 230
GG ++ T S GSGS AYGVL+ Y +++ +E E+A RAI A+ RD SG
Sbjct: 121 PAGGMIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYL 180
Query: 231 VYYVGPNGWKKLSGDDVGEL 250
V V +G++ L + V ++
Sbjct: 181 VAKVTKDGFEMLDKEKVNDI 200
>gi|148704391|gb|EDL36338.1| mCG8712, isoform CRA_a [Mus musculus]
Length = 182
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 77/106 (72%)
Query: 153 GTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELAR 212
G ++A GLYYVDSEG R+ GT FSVGSGS YAYGV+D GY +D+ +EEA +LAR
Sbjct: 75 GVIVAADSRATAGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLAR 134
Query: 213 RAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 258
RAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y V+
Sbjct: 135 RAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSSVS 180
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F GV+VAADSRA+ G Y
Sbjct: 47 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFLHGVIVAADSRATAGLYYVDSEG 95
Query: 87 KKI 89
+I
Sbjct: 96 NRI 98
>gi|26353354|dbj|BAC40307.1| unnamed protein product [Mus musculus]
Length = 177
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 77/106 (72%)
Query: 153 GTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELAR 212
G ++A GLYYVDSEG R+ GT FSVGSGS YAYGV+D GY +D+ +EEA +LAR
Sbjct: 70 GVIVAADSRATAGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLAR 129
Query: 213 RAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 258
RAIY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y V+
Sbjct: 130 RAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSSVS 175
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 27 AAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSV 86
AAPS+ +P ++ + + H GTTTLAF F GV+VAADSRA+ G Y
Sbjct: 42 AAPSWGVP---------EEPRIEMLH--GTTTLAFKFLHGVIVAADSRATAGLYYVDSEG 90
Query: 87 KKI 89
+I
Sbjct: 91 NRI 93
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ +F GV++A + RA+MG I+S+ KK+ +I + T AGG D Q R
Sbjct: 13 KGTTTVGLVFDGGVILATERRATMGNMIASKKAKKVYQIADRIGMTTAGGVGDAQQLARW 72
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ ++C L+ + R +SV ++ LL+NIL + R M V ++ G D GP +Y VD+ G
Sbjct: 73 VQVECSLYNIRRGREMSVGASASLLSNILNNNRMMPYYVQLLVGGVDSGGPSIYSVDALG 132
Query: 174 G-RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G + + GSGSP+AYGVL+ ++ M ++ +LA RA+ A RD+ASG SV
Sbjct: 133 GASPEDDIVATGSGSPFAYGVLEDRFEKGMPEKDCVDLAIRALRSAMRRDSASGEDISVV 192
Query: 233 YVGPNGWKKL 242
+ + +++
Sbjct: 193 VITKDKYEEF 202
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K +GTTT+ K+GV+ A++ RASMG ++ + +KI +IN +++ T+AG D Q
Sbjct: 4 KILEGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNL 63
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
+ + + L+++ N ++SV A+ + ANIL R + V T++ G D P LY +D
Sbjct: 64 MKIIEAEVSLYQMRNNDKMSVKAAASVTANIL---RSGPMYVQTLLGGMDGDKPSLYSLD 120
Query: 171 SEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVAS 230
GG ++ T S GSGS AYGVL+ Y +++ +E E+A RAI A+ RD SG
Sbjct: 121 PAGGMIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYL 180
Query: 231 VYYVGPNGWKKLSGDDVGEL 250
V V +G++ L + V ++
Sbjct: 181 VAKVTKDGFEMLDKEKVNDI 200
>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
gi|121694316|sp|A0B5B1.1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosaeta thermophila
PT]
Length = 207
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + GV++A++SRA+MG +I+S++ KKI +I+ + T AG D Q R
Sbjct: 6 KGTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQIDDLVGLTTAGVVGDAQALVRM 65
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ + RL+ + +++ + LL+NIL + R V ++ G D+ GP ++ +D+ G
Sbjct: 66 IQAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGVDKMGPKIFSLDALG 125
Query: 174 GRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G+++ S GSGSP AYGVL+S YK +SI++ + L RA++ A RD+ASG ++
Sbjct: 126 GQIEEHDIVSTGSGSPIAYGVLESLYKPGLSIQDGSVLCVRAVHTAMKRDSASGNGIALV 185
Query: 233 YVGPNGWKKLSGDDVGEL 250
+ + ++++ +V E+
Sbjct: 186 RITKDRYEEVPTSEVEEI 203
>gi|302348116|ref|YP_003815754.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
gi|302328528|gb|ADL18723.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
Length = 212
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 111/187 (59%), Gaps = 1/187 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ I + V++AAD RA+ G I+S++VKKI+++ Y T++G AD Q +
Sbjct: 19 GTTTVGLIAGDYVVLAADKRATAGTLIASRTVKKIVKLTDYAAMTISGLVADAQALADAV 78
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ R +EL +R+SV G + LLANIL S + V ++ G+D T P LY +D GG
Sbjct: 79 REEARYYELDRGKRLSVYGMATLLANILSSSKYFPYLVQLIVGGYD-TAPHLYAIDPYGG 137
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ S GSGSP A GVL+ GYK +S+++A LA AI A RD+A+G V +
Sbjct: 138 VTEEKVTSTGSGSPVALGVLERGYKEGISLDDAVNLAAEAIRSAILRDSATGDGIDVTII 197
Query: 235 GPNGWKK 241
G + +++
Sbjct: 198 GRSTYQE 204
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 118/202 (58%), Gaps = 7/202 (3%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + +GV++AAD RA MG I+ + VKKI I+ Y+ T AG AD Q
Sbjct: 9 KGTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDL 68
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYS----YRGMGLSVGTMIAGWDETGPGLYYV 169
+ + RL+EL + R IS + +++++L+S +R V ++ G+++ P LY +
Sbjct: 69 MRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPY--LVQLIVGGFNDDDPALYNL 126
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GV 228
D G ++ + GSGSP AYGVL++ Y+ MS+++A E+A RA+ A RD +G GV
Sbjct: 127 DPSGSIIEEDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERDTGTGEGV 186
Query: 229 ASVYYVGPNGWKKLSGDDVGEL 250
V G+++L ++V +L
Sbjct: 187 TVVTITREEGYRELPEEEVEKL 208
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 217
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 2/207 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
++ KGTTT+ + +G+++A D RA+MG I+ + KK+ +I+ YM T+AG D Q
Sbjct: 10 EYMKGTTTVGIVCNDGIVLATDKRATMGNLIADKEAKKLYKIDDYMAMTIAGSVGDAQSL 69
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYV 169
R + + L++L I + LL+N+L+ R + +I G+D G L+ +
Sbjct: 70 VRIISAEANLYKLRTGNNIPPHSCAMLLSNVLHGSRHFPFLIQLIIGGYDTIHGAKLFSL 129
Query: 170 DSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
D+ GG + T F+ GSGSP A+GVL+ YK DM+I + LA +++ A RDA SG
Sbjct: 130 DAVGGLNEETSFTATGSGSPTAFGVLEEEYKKDMTINKGKLLAIKSLTAAMKRDAFSGNG 189
Query: 229 ASVYYVGPNGWKKLSGDDVGELHYHYY 255
S+ + NG K S +++ EL Y
Sbjct: 190 ISLAVIDKNGVKIYSDEEIEELSNILY 216
>gi|297527490|ref|YP_003669514.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256406|gb|ADI32615.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 210
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K TTT+ + + V++AAD RA+ G ++ + VKKII I+ Y+ T++G AD +
Sbjct: 7 KIVSKTTTVGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRIDDYIAMTISGLVADAEII 66
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSY-RGMGLSVGTMIAGWDETGPGLYYV 169
R ++L R I V+G + L+ IL +Y R V ++ G+D GP L+Y+
Sbjct: 67 AEQARFIARKYKLELGRPIKVSGLASNLSIILNTYLRASPYIVQLLLGGYDNNGPHLFYM 126
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D G + + GSGSP A+GVL+ GY+ D+S+EEA ELA +A+ AT RD SG
Sbjct: 127 DLYGSLSEEKYMATGSGSPTAFGVLEEGYRSDLSLEEAKELAFKAVSAATRRDGFSGEGV 186
Query: 230 SVYYVGPNGW 239
+ +GP+ +
Sbjct: 187 DIVVIGPDTY 196
>gi|385806007|ref|YP_005842405.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
gi|383795870|gb|AFH42953.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
Length = 211
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 117/206 (56%), Gaps = 3/206 (1%)
Query: 39 FDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLG 98
FD K+++ K GTTT+ I K+ V++AAD RA+ G +I+ + +KI++I M
Sbjct: 3 FDRNVKNSEIYEKALHGTTTVGLIAKDAVILAADRRATAGTFIAHRKTRKILKITDKMAL 62
Query: 99 TMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAG 158
T AG AD Q L + + K+ ++V A+ LL+ +LY Y+ V ++ G
Sbjct: 63 TTAGLVADAQVLADWLNTQMNYLTITKKQPVTVREAAHLLSLLLYRYKLFPFYVQLILGG 122
Query: 159 WDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHA 218
+D T P L+ +D G ++ S GSGSP A GVL+ GY+ +MS EEA +LA +A+ A
Sbjct: 123 YD-TAPRLFSLDLYGSLVEEKYTSTGSGSPIAIGVLEDGYRENMSPEEARKLAVKAVQMA 181
Query: 219 TFRDAASG-GVASVYYVGPNGWKKLS 243
RD+A+G GV SV + G K+ S
Sbjct: 182 LKRDSATGDGVDSV-IITSEGIKEFS 206
>gi|239788859|dbj|BAH71088.1| ACYPI000065 [Acyrthosiphon pisum]
Length = 157
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 79/115 (68%), Gaps = 2/115 (1%)
Query: 25 LSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 84
L P ++ + T D + + H GTTTL F+++ G+++A DSRA+ G YI SQ
Sbjct: 44 LPGNPVENMRMITARDTMGRPIELNFHH--GTTTLGFLYQGGIVLAVDSRATGGQYIGSQ 101
Query: 85 SVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
+KKI+EIN +MLGT+AGGAADC +W R L +CRLHEL NK RISVT ASK+++
Sbjct: 102 CMKKIVEINDFMLGTLAGGAADCVYWDRVLSKQCRLHELRNKERISVTAASKIMS 156
>gi|170291023|ref|YP_001737839.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595829|sp|B1L6S7.1|PSB1_KORCO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170175103|gb|ACB08156.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 206
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 108/197 (54%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ FK GV+VA+D RA+ G +++S+S K ++I Y + T++G AD Q+ N
Sbjct: 4 KGTTTVGVKFKNGVIVASDKRATSGTFVASKSAVKTLKITDYAVATISGLVADGQYLVNN 63
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ L+ L +R +SV G +++LA +L YR L ++ G D G L+ VD G
Sbjct: 64 VRTIADLYSLDTERPLSVRGIARILAFLLRRYRPYFLLAQLIVGGVDREGAHLFNVDPFG 123
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
+ + GSGSP A V++SGY DM E A L ++ A RDAA+G V
Sbjct: 124 TLTEEDYLATGSGSPVAISVIESGYSPDMDRESALRLVISSMTAALSRDAATGDGIDVVV 183
Query: 234 VGPNGWKKLSGDDVGEL 250
+ G LS +++ +L
Sbjct: 184 IDDRGVNFLSREEISDL 200
>gi|389860540|ref|YP_006362779.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525443|gb|AFK50641.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 206
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 103/185 (55%), Gaps = 1/185 (0%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ + + V++AAD RA+ G + + VKKI +I Y T++G AD Q
Sbjct: 7 TTTVGLVVGDYVVLAADKRATGGPMVYHKRVKKIHKITDYAAMTISGLVADAQVLVDEAR 66
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSY-RGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
RL+EL RRI++ S ++ IL +Y R + V ++ G DE GP LYY+D G
Sbjct: 67 YIARLYELDYGRRITLRSLSNYMSLILSAYLRYVPFIVQLLLGGVDEEGPSLYYLDLYGS 126
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K S GSGSP AYGVL+ Y+ DMS+EEA LA +A+ A RD SG V +
Sbjct: 127 ISKEKYASTGSGSPVAYGVLEKEYRKDMSLEEAKHLAFKAVEAALSRDGFSGEGVDVVVI 186
Query: 235 GPNGW 239
GPN +
Sbjct: 187 GPNYY 191
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 111/199 (55%), Gaps = 2/199 (1%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ I + V++A D RASMG ++ + KK+ +I+ Y+ T+AG D Q R
Sbjct: 5 KGTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAIVRL 64
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
L + +L+++ + IS + LL+NIL+S R +I G+D G L+ +D
Sbjct: 65 LTAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGAKLFSLDPL 124
Query: 173 GGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG + F+ GSGSP AYGVL++GY DM +EE +LA +A+ A RD SG S+
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEAGYDRDMPVEEGIKLALKALKSAMERDTYSGNGISL 184
Query: 232 YYVGPNGWKKLSGDDVGEL 250
+ G K +++ ++
Sbjct: 185 AVITKEGVKIFEDEEIEKI 203
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 111/199 (55%), Gaps = 2/199 (1%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ I + V++A D RAS+G ++ + KK+ +I+ Y+ T+AG D Q R
Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRL 64
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
L + +L+++ R I + LL+NIL+S R +I G+D G L+ +D
Sbjct: 65 LIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPL 124
Query: 173 GGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG + F+ GSGSP AYGVL++GY DMS+EE +LA A+ A RD SG S+
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISL 184
Query: 232 YYVGPNGWKKLSGDDVGEL 250
+ +G K +++ ++
Sbjct: 185 AVITKDGVKIFEDEEIEKI 203
>gi|402912652|ref|XP_003918865.1| PREDICTED: proteasome subunit beta type-8-like, partial [Papio
anubis]
Length = 79
Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/79 (67%), Positives = 65/79 (82%)
Query: 90 IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMG 149
IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMG
Sbjct: 1 IEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMCQYRGMG 60
Query: 150 LSVGTMIAGWDETGPGLYY 168
LS+G+MI GWD+ GPGLYY
Sbjct: 61 LSMGSMICGWDKKGPGLYY 79
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 117/215 (54%), Gaps = 4/215 (1%)
Query: 38 DFDEFQKDTKAT--LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPY 95
+F E ++ +A+ + GTTT+ EGV++A D RASMG +SS+ V+K+ +I+P
Sbjct: 28 EFPETERRAQASPDEEMKTGTTTVGLKTSEGVVLATDMRASMGYMVSSKDVQKVEQIHPT 87
Query: 96 MLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTM 155
T+AG + Q R+L + L+E + +S+ + LLAN L S G V +
Sbjct: 88 AALTIAGSVSAAQSLIRSLKAETSLYETRRGQDMSMQALATLLANFLRS--GAFFVVQPI 145
Query: 156 IAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAI 215
+ G DE GP +Y +D+ GG + GSGS YA GVL+ Y+ D+SIEEA +A +AI
Sbjct: 146 LGGVDEEGPHVYSMDALGGMSEENYTVTGSGSQYALGVLEQHYEEDLSIEEAKTVAAKAI 205
Query: 216 YHATFRDAASGGVASVYYVGPNGWKKLSGDDVGEL 250
A RD ASG +V V G D+ ++
Sbjct: 206 QSAVERDLASGNGINVAVVTDEGVDITRHKDIAKV 240
>gi|126465836|ref|YP_001040945.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595723|sp|A3DN27.1|PSB2_STAMF RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126014659|gb|ABN70037.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 208
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 107/190 (56%), Gaps = 1/190 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K TTT+ + + V++AAD RA+ G ++ + VKKII I+ Y+ T++G AD +
Sbjct: 5 KIVSKTTTVGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRIDDYIAMTISGLVADAEII 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMG-LSVGTMIAGWDETGPGLYYV 169
R ++L R I V+ + L+ IL +Y M V ++ G+D+ GP L+Y+
Sbjct: 65 AEQARFIARKYKLELGRPIKVSALASNLSIILNAYLRMSPYIVQLLLGGYDDNGPHLFYI 124
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D G + + GSGSP A+GVL+ Y+ D+S++EA ELA +A+ AT RD SG
Sbjct: 125 DLFGSLSEEKYMATGSGSPTAFGVLEEEYRSDLSLDEAKELAFKAVSAATKRDGFSGEGV 184
Query: 230 SVYYVGPNGW 239
+ +GPN +
Sbjct: 185 DIVVIGPNTY 194
>gi|407465690|ref|YP_006776572.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407048878|gb|AFS83630.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 210
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 108/191 (56%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ K+GV++ AD RAS G +I++ + KI +I+ + T+AGG AD Q L
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQQIDQHAGLTLAGGVADAQNIVDIL 71
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
LH + + IS+ ++L + I + RG ++ G+D GP L+ VD G
Sbjct: 72 RYHSNLHRVEKQNSISIHSLARLCSLIFHQNRGYPFMADILLGGYDANGPSLFNVDMFGS 131
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ + + GSGSP AYG+L+ YK D++IEEA ++A RA+ A R+ +G ++ +
Sbjct: 132 VEEKSYVTTGSGSPVAYGLLEEEYKEDLTIEEAKQVALRAVKAAIVRNIGTGDGINIAIM 191
Query: 235 GPNGWKKLSGD 245
+G++ L+ +
Sbjct: 192 DKDGFRLLTDE 202
>gi|347522768|ref|YP_004780338.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459650|gb|AEM38086.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 209
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 106/181 (58%), Gaps = 1/181 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ +E V++AAD RA+ G YI+ + +KI++I YM T +G AD Q L
Sbjct: 18 GTTTVGLKLREYVVLAADRRATAGYYIAHKKTRKIVKITDYMAMTTSGLVADAQVLAEIL 77
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ R +EL KR+ SV A+ +LA I++S R V ++ G+D T P L+ +D G
Sbjct: 78 REELRYYELTTKRKPSVAAAANMLAAIIFSARMYPYIVQLLLGGYD-TAPRLFNIDWLGT 136
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ + GSGSP A GV++SGY+ DM ++EA ELA +A+ A RD A+G V +
Sbjct: 137 VTEEKYTATGSGSPIAIGVIESGYREDMKVDEAVELAVKAVRAAMERDVATGNGIDVVII 196
Query: 235 G 235
G
Sbjct: 197 G 197
>gi|374633938|ref|ZP_09706303.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373523726|gb|EHP68646.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 212
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 1/202 (0%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
D FQ K +K KGTTT+ + K+ V++AAD RAS G +++++ V+KI+ I+ + T
Sbjct: 3 DLFQGQNKQKIKILKGTTTVGLVVKDAVVLAADRRASAGFFVANKMVRKILYIDERIGIT 62
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
AG AD QF + L + ++ R ++V + L NIL + V +I G+
Sbjct: 63 TAGSVADLQFIYNYLKNIYHYNYISGNRPVTVKALATYLTNILSQSKYFPYLVQILIGGY 122
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D P L+ +D G + T + GSGSP A GVL+ GY+ M+ +EA ELA RA+ A
Sbjct: 123 D-VQPRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYRPSMTPDEAVELATRAVLSAI 181
Query: 220 FRDAASGGVASVYYVGPNGWKK 241
RD+ +G V + +G ++
Sbjct: 182 KRDSFTGTGVIVTKITKDGHQE 203
>gi|7527369|dbj|BAA94276.1| proteasome subunit LMP7A [Xenopus (Silurana) tropicalis]
Length = 87
Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRAS G YIS+ K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N
Sbjct: 1 IVAVDSRASAGSYISNVKFNKVIEINPYLLGTMSGSAADCQYWERVLAKECRLYQLRNNS 60
Query: 128 RISVTGASKLLANILYSYRGMGLSVGT 154
RISV+ ASKL+ N++ YRG GLSVG+
Sbjct: 61 RISVSAASKLMCNMMLQYRGTGLSVGS 87
>gi|7527355|dbj|BAA94269.1| proteasome subunit LMP7A [Xenopus amieti]
gi|7527357|dbj|BAA94270.1| proteasome subunit LMP7A [Xenopus amieti]
Length = 87
Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRAS G YIS+ K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N
Sbjct: 1 IVAVDSRASAGSYISTIKFNKVIEINPYLLGTMSGSAADCQYWERMLAKECRLYQLRNNS 60
Query: 128 RISVTGASKLLANILYSYRGMGLSVGT 154
RISV+ ASKL+ N++ YRG GLSVG+
Sbjct: 61 RISVSAASKLMCNMMLQYRGTGLSVGS 87
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + K+GV++AAD RAS+G + S+ V K+ +I+ ++ AG D R
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSKEVTKVFQIDDHLALAGAGSVGDILSLVRL 65
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L + +L+ R ISV + L +NIL+ R M +IAG+DE P LY +D G
Sbjct: 66 LRAEVKLYRAKVGREISVKALATLTSNILHGSRFMPYFGWFLIAGYDEK-PALYSLDMAG 124
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G + + GSG A+ VL+ GYK D+++EE +LA +AI AT RD +G ++
Sbjct: 125 GVTEDKFTAAGSGMELAFAVLEDGYKDDINVEEGVKLALKAIKIATRRDVFTGDGITLVT 184
Query: 234 VGPNGWKKLSGDDVGEL 250
V G+++L+ +++ L
Sbjct: 185 VTEEGYRELNREEIEAL 201
>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
Length = 210
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 114/194 (58%), Gaps = 2/194 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTL + V++ DSRA+MG +IS+++ +K+ +I+ Y T+AG D Q R +
Sbjct: 7 GTTTLGITAGDYVIMGTDSRATMGNFISNKNAQKLYKIDTYAGMTIAGLVGDAQVLVRYM 66
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L+ + K + + A+ LL+N+L + V ++ G+D+ P ++ +D+ GG
Sbjct: 67 RAEMELYRVQRKINMPIEAAATLLSNMLNQSKYYPYMVQLLVGGFDKK-PHIFSIDAAGG 125
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ S GSGSP+ YGVL++ Y+ +M +++A LA +AI A RD+ASG + + +
Sbjct: 126 SVEDEYASTGSGSPFVYGVLEAEYQPNMKLDDAINLAIKAISVAKQRDSASGNMLQIGVI 185
Query: 235 GP-NGWKKLSGDDV 247
P G+ LS DD+
Sbjct: 186 DPEKGFNYLSEDDI 199
>gi|7527328|dbj|BAA94258.1| proteasome subunit LMP7 [Xenopus laevis]
gi|7527330|dbj|BAA94259.1| proteasome subunit LMP7 [Xenopus laevis]
gi|7527336|dbj|BAA94262.1| proteasome subunit LMP7A [Xenopus laevis/gilli]
gi|7527342|dbj|BAA94265.1| proteasome subunit LMP7A [Xenopus laevis/gilli]
gi|7527346|dbj|BAA94267.1| proteasome subunit LMP7A [Xenopus muelleri]
gi|7527348|dbj|BAA94268.1| proteasome subunit LMP7A [Xenopus muelleri]
gi|7527363|dbj|BAA94273.1| proteasome subunit LMP7A [Xenopus ruwenzoriensis]
Length = 87
Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRAS G YIS+ K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N
Sbjct: 1 IVAVDSRASAGSYISTIKFNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYQLRNNS 60
Query: 128 RISVTGASKLLANILYSYRGMGLSVGT 154
RISV+ ASKL+ N++ YRG GLSVG+
Sbjct: 61 RISVSAASKLMCNMMLQYRGTGLSVGS 87
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 2/202 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTT+ I + V++A D RA+MG I+ + KK+ +I+ Y+ T+AG D Q
Sbjct: 6 KYMKGTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAL 65
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYV 169
R + + +L+++ + I + L++NIL+ R +I G+D GP L+ +
Sbjct: 66 VRYVSAEAKLYKMRTGKNIPPLSCATLISNILHGNRMFPFLTQLIIGGYDLLYGPRLFSL 125
Query: 170 DSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
D GG + + F+ GSGSP AYG+L+ Y DM++++ LA +A+ A RDA SG
Sbjct: 126 DPIGGLNEESSFTATGSGSPTAYGILELEYSKDMTLKDGLNLAIKALISAMERDAFSGNG 185
Query: 229 ASVYYVGPNGWKKLSGDDVGEL 250
S+ YV G L +++ ++
Sbjct: 186 ISLAYVNKEGVTILEDEEIEKM 207
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 2/199 (1%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ I + V++A D RAS+G ++ + KK+ +I+ Y+ T+AG D Q R
Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRL 64
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
L + +L+++ R I + LL+NIL+S R +I G+D G L+ +D
Sbjct: 65 LTAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQIIIGGYDLLEGAKLFSLDPL 124
Query: 173 GGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG + F+ GSGSP AYGVL++GY +MS+EE +LA A+ A RD SG S+
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEAGYDREMSVEEGIKLAINALKSAMERDTFSGNGISL 184
Query: 232 YYVGPNGWKKLSGDDVGEL 250
+ G K +++ ++
Sbjct: 185 AVITKEGVKIFEDEEIEKI 203
>gi|7527361|dbj|BAA94272.1| proteasome subunit LMP7A [Xenopus vestitus]
Length = 87
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRAS G YIS+ K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N
Sbjct: 1 IVAVDSRASSGSYISNVKFNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYQLRNNS 60
Query: 128 RISVTGASKLLANILYSYRGMGLSVGT 154
RISV+ ASKL+ N++ YRG GLSVG+
Sbjct: 61 RISVSAASKLMCNMMLQYRGTGLSVGS 87
>gi|226471268|emb|CAX70715.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
Length = 95
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 72/89 (80%)
Query: 166 LYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAAS 225
+YYVD++G R G FSVGSGSPYAYGVLD+GYK++MS E+A ELA+R+I+HAT RDAAS
Sbjct: 4 VYYVDTDGNRTPGNLFSVGSGSPYAYGVLDAGYKYEMSDEDAYELAKRSIFHATHRDAAS 63
Query: 226 GGVASVYYVGPNGWKKLSGDDVGELHYHY 254
GG ++Y++ +GWK + DVGEL+Y Y
Sbjct: 64 GGFVNLYHMKEDGWKFIGIFDVGELYYKY 92
>gi|7527344|dbj|BAA94266.1| proteasome subunit LMP7A [Xenopus borealis]
Length = 87
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRAS G YIS K+IEINPY+LGTM+G AADCQ+W R L +CRL++L N
Sbjct: 1 IVAVDSRASAGSYISDVKFNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYQLRNNS 60
Query: 128 RISVTGASKLLANILYSYRGMGLSVGT 154
RISV+ ASKL+ N++ YRG GLSVG+
Sbjct: 61 RISVSAASKLMCNMMLQYRGTGLSVGS 87
>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
Length = 217
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ K+ V++A + R +M +I ++ KK+ +I+ Y T+AG D Q R +
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYM 67
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L+ L + + + + LL+N+L + M V ++ G D T P ++ +D+ GG
Sbjct: 68 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID-TAPHVFSIDAAGG 126
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ S GSGSP+ YGVL+S Y M+++E +L RAI A RD+ASGG+ V +
Sbjct: 127 SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVI 186
Query: 235 G-PNGWKKLSGDDV 247
+G+ +L D +
Sbjct: 187 TRKDGYVQLPTDQI 200
>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
gi|130867|sp|P28061.1|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
Length = 211
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ K+ V++A + R +M +I ++ KK+ +I+ Y T+AG D Q R +
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYM 67
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L+ L + + + + LL+N+L + M V ++ G D T P ++ +D+ GG
Sbjct: 68 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID-TAPHVFSIDAAGG 126
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ S GSGSP+ YGVL+S Y M+++E +L RAI A RD+ASGG+ V +
Sbjct: 127 SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVI 186
Query: 235 G-PNGWKKLSGDDV 247
+G+ +L D +
Sbjct: 187 TRKDGYVQLPTDQI 200
>gi|313126409|ref|YP_004036679.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|448286253|ref|ZP_21477487.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
gi|445575086|gb|ELY29568.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
Length = 243
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 111/199 (55%), Gaps = 3/199 (1%)
Query: 43 QKDTKATLKHAK-GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMA 101
Q+ ++T K K GTTT+ ++GV++A D RAS+G +SS++V+K+ EI+P T+A
Sbjct: 36 QRAGESTAKETKTGTTTVGLKTEDGVVLATDMRASLGHMVSSKNVQKVEEIHPTGALTIA 95
Query: 102 GGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 161
G + Q R++ + RL+E +S+ S LL N L S G V ++ G+D+
Sbjct: 96 GSVSAAQSLIRSIRAEVRLYESRRGEDMSMQALSTLLGNFLRS--GAFYIVQPILGGFDD 153
Query: 162 TGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFR 221
G +Y +D G L+ GSGS YA GVL+ Y D+SIEEA A RAI A R
Sbjct: 154 EGAHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEYSNDLSIEEAKTTAARAIKSAVER 213
Query: 222 DAASGGVASVYYVGPNGWK 240
D ASG +V V +G +
Sbjct: 214 DLASGNGINVCVVTEDGVE 232
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 2/197 (1%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ I + V++A D RAS+G ++ + KK+ +I+ Y+ T+AG D Q R L
Sbjct: 2 TTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLI 61
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSEGG 174
+ +L+++ R I + LL+NIL+S R +I G+D G L+ +D GG
Sbjct: 62 AEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGG 121
Query: 175 RLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
+ F+ GSGSP AYGVL++GY DMS+EE +LA A+ A RD SG S+
Sbjct: 122 MNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAV 181
Query: 234 VGPNGWKKLSGDDVGEL 250
+ +G K +++ ++
Sbjct: 182 ITKDGVKIFEDEEIEKI 198
>gi|49175785|gb|AAT52190.1| 26S proteasome beta subunit [Pisum sativum]
Length = 54
Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats.
Identities = 52/54 (96%), Positives = 54/54 (100%)
Query: 99 TMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSV 152
+MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY+YRGMGLSV
Sbjct: 1 SMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSV 54
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 1/197 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + ++GV++AAD RAS+G + +++V KI +I+ + AG D R
Sbjct: 6 KGTTTVGIVCRDGVVLAADRRASLGNMVYAKNVTKIYQIDERLAIAGAGNVGDILSLVRL 65
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L + RL+ R +S + LLANIL R V ++ G+D+ P LY VD G
Sbjct: 66 LRAEVRLYRSRVGRSMSAKALATLLANILNGTRYFPYLVWFLVGGYDD-APRLYSVDMAG 124
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G + + GSG +A+ +LDS YK +MS+EE +LA RAI A RD +G +V
Sbjct: 125 GITEDKYVAAGSGMEFAFSILDSQYKPEMSVEEGVKLAVRAINSAIKRDVFTGEGITVVT 184
Query: 234 VGPNGWKKLSGDDVGEL 250
+ G+++LS ++V +
Sbjct: 185 ITEKGYRELSEEEVNTI 201
>gi|407463311|ref|YP_006774628.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046933|gb|AFS81686.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 210
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 106/189 (56%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ K+GV++ AD RAS G +I++ + KI +I+ + T+AGG AD Q L
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDIL 71
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
LH + IS+ ++L + I + RG ++ G+D GP L+ +D G
Sbjct: 72 RYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDTEGPALFNIDMFGS 131
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K + + GSGSP AYG+L+ YK D+++EEA ++A RA+ A R+ +G ++ +
Sbjct: 132 VEKKSYVTTGSGSPVAYGLLEEEYKEDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVM 191
Query: 235 GPNGWKKLS 243
+G++ L+
Sbjct: 192 DKDGFRLLT 200
>gi|374724463|gb|EHR76543.1| proteasome, beta component (T1A subfamily) [uncultured marine group
II euryarchaeote]
Length = 208
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 4/197 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GT+TL F GV+V AD RA+MG +I+++SV+K+ +I + T AG Q R L
Sbjct: 13 GTSTLGITFDGGVVVGADHRATMGHFIANKSVQKLFKIGDNLALTTAGLVGHAQSLSRTL 72
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L +L +++++V GA+ ANIL G V +I G D+ G +Y +DS GG
Sbjct: 73 AAEVSLFQLRRQQQMTVKGAATFTANIL---AGRPHWVQLLIVGVDDEGGHVYSIDSAGG 129
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVYY 233
+ + + GSGSPY YGVL+ G+ M+ +A +LA RA++ + RDAASG G+
Sbjct: 130 SIPDSYCATGSGSPYMYGVLEDGFSEGMTRTDALKLAARALHASGQRDAASGNGMDLAVI 189
Query: 234 VGPNGWKKLSGDDVGEL 250
+G+ ++ ++ +L
Sbjct: 190 TAKDGYVAITQGEIDKL 206
>gi|395503110|ref|XP_003775283.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
type-11-like, partial [Sarcophilus harrisii]
Length = 191
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 89/122 (72%)
Query: 130 SVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPY 189
SV GA+K LA +L+ YRG+GL V T + GWD+ GP L+YV S+G L G FS GSGSPY
Sbjct: 3 SVAGAAKRLAAMLFRYRGLGLCVATALGGWDQAGPALFYVYSDGTLLAGDVFSAGSGSPY 62
Query: 190 AYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGE 249
AYGVLD GY++DM+++EA LARRA+ HA RDA SGG +Y+V +GW+++S +D
Sbjct: 63 AYGVLDRGYRYDMTVQEAYCLARRAVAHAARRDAYSGGSVDLYHVKESGWERVSREDACA 122
Query: 250 LH 251
L+
Sbjct: 123 LY 124
>gi|7527332|dbj|BAA94260.1| proteasome subunit LMP7 [Xenopus laevis]
gi|7527338|dbj|BAA94263.1| proteasome subunit LMP7B [Xenopus laevis/gilli]
gi|7527340|dbj|BAA94264.1| proteasome subunit LMP7B [Xenopus laevis/gilli]
gi|7527365|dbj|BAA94274.1| proteasome subunit LMP7B [Xenopus ruwenzoriensis]
gi|7527367|dbj|BAA94275.1| proteasome subunit LMP7B [Xenopus ruwenzoriensis]
Length = 87
Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/87 (62%), Positives = 66/87 (75%)
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRAS G YI+S K+IEINPY+LGTM+G AADCQ W R L +CRL++L N
Sbjct: 1 IVAVDSRASAGSYIASLKANKVIEINPYLLGTMSGSAADCQHWERLLAKECRLYQLRNNS 60
Query: 128 RISVTGASKLLANILYSYRGMGLSVGT 154
RISV+ ASKLL N++ YRG GLSVG+
Sbjct: 61 RISVSSASKLLCNMMLQYRGSGLSVGS 87
>gi|393794893|ref|ZP_10378257.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 210
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 108/191 (56%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ K+GV++ AD RAS G +I++ + KI +I+ + T+AGG AD Q L
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDEHAGLTLAGGVADAQNIVDIL 71
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
LH + + IS+ ++L + I + RG ++ G+D GP L+ +D G
Sbjct: 72 RYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDANGPALFNIDMFGS 131
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K + + GSGSP AYG+L+ Y+ D+++EEA ++A RA+ A R+ +G ++ +
Sbjct: 132 VEKKSYVTTGSGSPVAYGLLEEEYRPDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVM 191
Query: 235 GPNGWKKLSGD 245
+G++ L+ +
Sbjct: 192 DKDGFRLLTDE 202
>gi|7527334|dbj|BAA94261.1| proteasome subunit LMP7 [Xenopus laevis]
Length = 87
Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/87 (62%), Positives = 65/87 (74%)
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRAS G YI S K+IEINPY+LGTM+G AADCQ W R L +CRL++L N
Sbjct: 1 IVAVDSRASAGSYIESLKANKVIEINPYLLGTMSGSAADCQHWERLLAKECRLYQLRNNS 60
Query: 128 RISVTGASKLLANILYSYRGMGLSVGT 154
RISV+ ASKLL N++ YRG GLSVG+
Sbjct: 61 RISVSSASKLLCNMMLQYRGSGLSVGS 87
>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
Length = 243
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 114/209 (54%), Gaps = 3/209 (1%)
Query: 43 QKDTKATLKHAK-GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMA 101
Q+ ++T + K GTTT+ ++GV++A D RAS+G +SS+ V+K+ EI+P T+A
Sbjct: 36 QRAGESTPQETKTGTTTVGLKTEDGVVLATDMRASLGYMVSSKDVQKVEEIHPTGALTIA 95
Query: 102 GGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 161
G + Q R++ + RL+E +S+T S LL N L S G V ++ G DE
Sbjct: 96 GSVSAAQSLIRSIRAEVRLYESRRGENMSMTALSTLLGNFLRS--GAFYVVQPILGGVDE 153
Query: 162 TGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFR 221
GP +Y +D G L+ GSGS YA GVL+ Y +SI+EA +A RA+ A R
Sbjct: 154 DGPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEYNDALSIDEAKTVAARAVKSAVER 213
Query: 222 DAASGGVASVYYVGPNGWKKLSGDDVGEL 250
D ASG ++ V +G + D E+
Sbjct: 214 DLASGNGINICVVTEDGVEITQHKDFEEV 242
>gi|348541141|ref|XP_003458045.1| PREDICTED: proteasome subunit beta type-6-B like protein-like
isoform 1 [Oreochromis niloticus]
Length = 217
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 112/202 (55%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA IF GV++ +DSRASMGG Y+SS+++ K+I+++ + MAG AD Q +
Sbjct: 16 GTTILAAIFDGGVVIGSDSRASMGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVIKA 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE-TGPGLYYVDSE 172
H + + V A+ +L ++ Y + L G + AGWD+ GP +Y V S
Sbjct: 76 AKFHLSFHSVQMESPPQVIAAASVLKDLCYKNKDE-LQAGFLTAGWDKKNGPQVYVV-SL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L + ++G SGS Y YG +D+ YK +M+ EE + A A+ A RD SGGVA +
Sbjct: 134 GGMLISQQVTIGGSGSTYIYGYVDAKYKPNMTKEECLQFATNALALAMGRDNVSGGVAHL 193
Query: 232 YYVGPNGWKK--LSGDDVGELH 251
+ G + + GD + + H
Sbjct: 194 VVITEKGVEHVVVPGDKLPKFH 215
>gi|342326218|gb|AEL23024.1| proteasome subunit beta type 8 [Cherax quadricarinatus]
Length = 96
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 65/87 (74%)
Query: 168 YVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGG 227
YVD+ G R+ G FSVGSGS YAYGVLDSGY+ DMS EA EL RRAIYHAT RDA SGG
Sbjct: 1 YVDNNGNRMPGNVFSVGSGSIYAYGVLDSGYRSDMSDTEAQELGRRAIYHATHRDAYSGG 60
Query: 228 VASVYYVGPNGWKKLSGDDVGELHYHY 254
V VY++ +GW K++ +D +LHY Y
Sbjct: 61 VVRVYHIKEDGWTKITEEDNKDLHYKY 87
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 109/198 (55%), Gaps = 2/198 (1%)
Query: 41 EFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTM 100
E + D+ + GTTT+ +EGV++A D RASMG +SS+ V+K+ EI+P T+
Sbjct: 35 ERRADSLGDKETKTGTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTI 94
Query: 101 AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
AG + Q +L + RL+E +S+ S L+ N L S G V ++ G D
Sbjct: 95 AGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLRS--GGFYVVQPILGGVD 152
Query: 161 ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATF 220
ETGP +Y +D G L+ GSGS YA GVL+ +K +SIEEA ++A +AI A
Sbjct: 153 ETGPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFKDGLSIEEAKQVATKAIRSAVE 212
Query: 221 RDAASGGVASVYYVGPNG 238
RD ASG ++ V +G
Sbjct: 213 RDLASGNGINIAVVTEDG 230
>gi|374636366|ref|ZP_09707939.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
gi|373559248|gb|EHP85553.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
Length = 220
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTT+ I + V++A D RA+MG I+ + KK+ +I+ Y+ T+AG D Q
Sbjct: 6 KYMKGTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAL 65
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYV 169
R + + +L+++ + I + L++NIL+ R +I G+D GP L+ +
Sbjct: 66 VRYVSAEAKLYKMRTGKNIPPLSCATLMSNILHGSRMFPFLTQLIIGGYDFLYGPRLFSL 125
Query: 170 DSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
D GG + + F+ GSGSP AYGVL+ Y DM +++ L+ +A+ A RDA SG
Sbjct: 126 DPVGGLNEESYFTATGSGSPTAYGVLELEYSRDMLLKDGLNLSVKALMSAMERDAFSGNG 185
Query: 229 ASVYYVGPNGWKKL 242
S+ YV G K L
Sbjct: 186 ISLAYVNKEGVKIL 199
>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 210
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 107/189 (56%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ K+GV++ AD RAS G +I++ + KI +I+ + T+AGG AD Q L
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDAHAGLTLAGGVADAQNIVDIL 71
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
LH + + IS+ ++L + I + RG ++ G+D GP L+ +D G
Sbjct: 72 RYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDANGPALFNIDMFGS 131
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ + + GSGSP AYG+L+ Y+ D+++EEA ++A RA+ A R+ +G ++ +
Sbjct: 132 VEQKSYVTTGSGSPVAYGLLEEEYRSDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVM 191
Query: 235 GPNGWKKLS 243
+G++ L+
Sbjct: 192 DKDGFRLLT 200
>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
Length = 200
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 106/189 (56%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
G T + +GV+VAA+ R S GGYI S++ KK+ I +M+ AG AD Q R +
Sbjct: 9 GATAVGIKVNDGVVVAAEKRISYGGYIVSRAGKKVFRIADHMVIAAAGLFADMQSLSRII 68
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ EL + ++ V A+KLL+ ILYSY+ M + AG+DE G LY +D G
Sbjct: 69 SAEIMYRELLSSSKMRVRAAAKLLSAILYSYKLMPFLSEIIFAGFDEEGYHLYVLDPVGS 128
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ ++G+G+ A GV++S YK ++I++A ELA +++ A RDA SG + V
Sbjct: 129 IIEDDYAAIGTGASIAIGVIESEYKNTLTIDQATELAIKSVKAAISRDAVSGDGIDIAVV 188
Query: 235 GPNGWKKLS 243
NG + S
Sbjct: 189 TNNGINERS 197
>gi|386875364|ref|ZP_10117538.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386806763|gb|EIJ66208.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 210
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 108/191 (56%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ K+GV++ AD RAS G +I++ + KI +I+ + T+AGG AD Q L
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDLHAGLTLAGGVADAQNIVDIL 71
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
LH + + IS+ ++L + I + RG ++ G+D GP L+ +D G
Sbjct: 72 RYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGFDANGPALFNIDMFGS 131
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ + + GSGSP AYG+L+ YK D+++EEA ++A RA+ A R+ +G ++ +
Sbjct: 132 VEEKSYVTTGSGSPVAYGLLEEEYKKDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVM 191
Query: 235 GPNGWKKLSGD 245
+G++ L+ +
Sbjct: 192 DKDGFRLLTDE 202
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 116/201 (57%), Gaps = 3/201 (1%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
++ +GTTT+ F+ +GV++A ++RA+MG +++++ K+ +I+ + T+AG + Q
Sbjct: 5 ENMEGTTTVGFVCTDGVVLATETRATMGSLVANKNADKLFQIDDKIGATIAGTVSHAQSL 64
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
L + L++L N++ +S+ + L +NIL + V T++AG D+ G LY +D
Sbjct: 65 MDILKAEISLYKLRNEKDMSIDALAVLTSNIL---KSRPYYVQTILAGVDKDGAKLYTLD 121
Query: 171 SEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVAS 230
G + T S GSGSPYA+GVL+ Y D++ EE ++A +AI A RD SG
Sbjct: 122 PSGSYIPDTFTSTGSGSPYAFGVLEDRYNEDITTEEGKKIAIKAITSAMERDVYSGNNYR 181
Query: 231 VYYVGPNGWKKLSGDDVGELH 251
+ + +G K + +++ ++
Sbjct: 182 LGVITKDGMKIYTKEEIAQIK 202
>gi|70606695|ref|YP_255565.1| proteasome beta subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066918|ref|YP_007434000.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449069190|ref|YP_007436271.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
gi|121725055|sp|Q4JAA8.1|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
639]
gi|449035426|gb|AGE70852.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449037698|gb|AGE73123.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
Length = 203
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 1/188 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K KGTTT+ K+GV++AAD RAS G Y++ + V+K++ + + T AG AD QF
Sbjct: 6 KILKGTTTVGIKVKDGVVLAADRRASAGYYVAHKYVRKVLYVTDNIGITTAGSVADLQFI 65
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
+ L + + + I+V G + LAN+L S + V +I G D+ P LY +D
Sbjct: 66 YEALKYIYHRNSITGEGPITVKGIATWLANVLSSSKYFPYLVQILIGGVDDQ-PRLYNLD 124
Query: 171 SEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVAS 230
G + + GSGSP A GVL+ YK +MS++EAAELA+RAI+ + RD+ +G
Sbjct: 125 YLGDITEEEYTATGSGSPEALGVLEDNYKPEMSLDEAAELAKRAIFSSIKRDSFTGTGVI 184
Query: 231 VYYVGPNG 238
V + NG
Sbjct: 185 VTKITKNG 192
>gi|7527359|dbj|BAA94271.1| proteasome subunit LMP7B [Xenopus vestitus]
Length = 87
Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127
+VA DSRAS G YI+S K+IEINPY+LGTM+G AADCQ W R L +CRL++L N
Sbjct: 1 IVAVDSRASAGSYIASLKANKVIEINPYLLGTMSGSAADCQHWERLLAKECRLYQLRNNS 60
Query: 128 RISVTGASKLLANILYSYRGMGLSVGT 154
RISV+ ASKLL N++ YRG GLS+G+
Sbjct: 61 RISVSSASKLLCNMMLQYRGSGLSMGS 87
>gi|195927408|pdb|3C91|H Chain H, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927409|pdb|3C91|I Chain I, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927410|pdb|3C91|J Chain J, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927411|pdb|3C91|K Chain K, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927412|pdb|3C91|L Chain L, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927413|pdb|3C91|M Chain M, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927414|pdb|3C91|N Chain N, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927422|pdb|3C91|V Chain V, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927423|pdb|3C91|W Chain W, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927424|pdb|3C91|X Chain X, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927425|pdb|3C91|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927426|pdb|3C91|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927427|pdb|3C91|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927428|pdb|3C91|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927436|pdb|3C92|H Chain H, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927437|pdb|3C92|I Chain I, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927438|pdb|3C92|J Chain J, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927439|pdb|3C92|K Chain K, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927440|pdb|3C92|L Chain L, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927441|pdb|3C92|M Chain M, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927442|pdb|3C92|N Chain N, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927450|pdb|3C92|V Chain V, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927451|pdb|3C92|W Chain W, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927452|pdb|3C92|X Chain X, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927453|pdb|3C92|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927454|pdb|3C92|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927455|pdb|3C92|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927456|pdb|3C92|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|262368054|pdb|3JRM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368055|pdb|3JRM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368056|pdb|3JRM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368057|pdb|3JRM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368058|pdb|3JRM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368059|pdb|3JRM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368060|pdb|3JRM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368080|pdb|3JSE|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368081|pdb|3JSE|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368082|pdb|3JSE|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368083|pdb|3JSE|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368084|pdb|3JSE|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368085|pdb|3JSE|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368086|pdb|3JSE|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368101|pdb|3JTL|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368102|pdb|3JTL|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368103|pdb|3JTL|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368104|pdb|3JTL|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368105|pdb|3JTL|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368106|pdb|3JTL|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368107|pdb|3JTL|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
Length = 203
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 107/193 (55%), Gaps = 2/193 (1%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ K+ V++A + R +M +I ++ KK+ +I+ Y T+AG D Q R +
Sbjct: 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMK 60
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
+ L+ L + + + + LL+N+L + M V ++ G D T P ++ +D+ GG
Sbjct: 61 AELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID-TAPHVFSIDAAGGS 119
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
++ S GSGSP+ YGVL+S Y M+++E +L RAI A RD+ASGG+ V +
Sbjct: 120 VEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVIT 179
Query: 236 -PNGWKKLSGDDV 247
+G+ +L D +
Sbjct: 180 RKDGYVQLPTDQI 192
>gi|18859269|ref|NP_571751.1| proteasome beta 11 subunit [Danio rerio]
gi|5833455|gb|AAD53516.1|AF155576_1 proteasome subunit beta 11 [Danio rerio]
gi|29561857|emb|CAD87790.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
rerio]
gi|49903219|gb|AAH76475.1| Psmb11 protein [Danio rerio]
gi|94732366|emb|CAK04957.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
rerio]
gi|182889396|gb|AAI65038.1| Psmb11 protein [Danio rerio]
Length = 217
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 113/202 (55%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMG-GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA F GV++ +DSRASMG Y+SS+++ K+I+++ + +AG AD Q +
Sbjct: 16 GTTILAVKFNGGVIIGSDSRASMGESYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKM 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
+ H + + V A+ ++ + YS + L G + AGWD + GP +Y V S
Sbjct: 76 AKFQLSFHSIQMESPPLVKAAASIMRELCYSNKE-ELRAGFITAGWDRKKGPQIYVV-SL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG +D+ +K DM++EEA + + A+ A RD SGGV +
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYVDAKFKPDMTLEEATQFSTNALALAMGRDNVSGGVVHL 193
Query: 232 YYVGPNGWKKL--SGDDVGELH 251
+ G K + GD++ + H
Sbjct: 194 VVITEAGVKHIVVPGDELPKFH 215
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ K+GV++ AD RAS G +I++ + KI +I+ + T+AGG AD Q L
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDIL 71
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
LH + IS+ ++L + I + RG ++ G+D GP L+ +D G
Sbjct: 72 RYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDAEGPALFNIDMFGS 131
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K + GSGSP AYG+L+ Y+ D+++EEA ++A RA+ A R+ +G ++ +
Sbjct: 132 VEKKAYVTTGSGSPVAYGLLEEEYREDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAIM 191
Query: 235 GPNGWKKLS 243
+G++ L+
Sbjct: 192 DKDGFRLLT 200
>gi|57641364|ref|YP_183842.1| proteasome subunit beta [Thermococcus kodakarensis KOD1]
gi|74502448|sp|Q5JDJ9.1|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
Length = 203
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + K+GV++AAD RAS+G + S+ V K+ +I+ ++ AG D R
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSERVTKVFQIDDHLAIAGAGTVGDILSLVRL 65
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L + +L+ R +SV + L +NIL+S RG ++ G+D + P LY +D+ G
Sbjct: 66 LRAEAKLYRAKVSREMSVKALATLTSNILHSGRGFAYMAWFLVGGYD-SAPRLYSIDAAG 124
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G + + GSG +A+ VL+ Y+ + +EE +LA RAI AT RD +GG ++
Sbjct: 125 GVTEDRFTAAGSGMEFAFSVLEENYRDGIPLEEGVKLALRAIKAATKRDVFTGGGVTLVT 184
Query: 234 VGPNGWKKLSGDDVGEL 250
+ G+++ S +++ L
Sbjct: 185 ITEEGYREWSEEELKSL 201
>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 204
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 102/183 (55%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
G T + K+GV++AA+ R + G Y S S KK+ +N M AG AD Q + L
Sbjct: 8 GATAVGIRAKDGVVLAAEKRITYGFYSLSSSGKKVFIVNDRMAIASAGVIADMQTLAKIL 67
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ +++EL KR+ SV +KLL+ I+++ R M ++ G+DE GP ++ +D G
Sbjct: 68 RVNAKMYELDAKRKPSVAAMAKLLSIIMFNRRWMPFIAEVLVGGYDEEGPHVFVLDPVGS 127
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ ++G+G+ A G+LDSGYK D+ + EA +LA AI A RD SGG + +
Sbjct: 128 LIEDDYAALGTGAKMAIGILDSGYKKDIDVVEARKLAINAIRAALERDPVSGGGIDLVII 187
Query: 235 GPN 237
P
Sbjct: 188 TPT 190
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 2/201 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ GTTT+ ++G ++A D RAS+G +SS+ V+K+ EI+P T+AG + Q
Sbjct: 44 METKTGTTTVGLKTQDGTVLATDMRASLGRMVSSKDVQKVEEIHPTGALTIAGSVSAAQS 103
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
++ + RL+E +S+ S LL N L S G V ++ G D+ GP +Y +
Sbjct: 104 LISSIRAEVRLYEARRGEDMSMEALSTLLGNFLRS--GGFFIVQPILGGVDDDGPHIYSI 161
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D G ++ GSGS YA GVL+ Y D+SIEEA +A R+I A RD ASG
Sbjct: 162 DPAGSIIEEEYTVTGSGSQYALGVLEQQYNEDLSIEEAKTVAARSIESAVERDLASGNGI 221
Query: 230 SVYYVGPNGWKKLSGDDVGEL 250
+V V +G + +D EL
Sbjct: 222 NVCVVTEDGVEITQHEDFEEL 242
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 115/202 (56%), Gaps = 2/202 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
++ KGTTT+ I ++GV++A D RA+MG I+ + KK+ +I+ Y+ T+AG D Q
Sbjct: 10 EYMKGTTTVGLICEDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSL 69
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE-TGPGLYYV 169
R L + +++++ ++ + L +N+L+ R L +I G+D GP L+ +
Sbjct: 70 IRLLSAEAKIYKMRTGNNMTPLSCTTLTSNVLHGNRHYPLLTQLIIGGYDLINGPKLFSL 129
Query: 170 DSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
D GG + + F+ GSGSP AYGVL++ YK +++IE+ +A +A+ A RDA SG
Sbjct: 130 DPVGGINEESSFTATGSGSPTAYGVLEAEYKSEINIEKGLLIAVKALISAMQRDAYSGNG 189
Query: 229 ASVYYVGPNGWKKLSGDDVGEL 250
S+ + G S +++ L
Sbjct: 190 ISLAKIDKTGVTLYSDEEIENL 211
>gi|269986877|gb|EEZ93154.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 206
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 116/195 (59%), Gaps = 3/195 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTL ++K+GV++AAD RA+ +++++ +K++ I+ + T AG AD Q R +
Sbjct: 7 GTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMAISGSIGITTAGMVADLQAMVRLM 66
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYR-GMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ L+E+ + ++ GA LL+ +L++ R + L G I G +T P L+ +D G
Sbjct: 67 RSELTLYEIRSGSKLDTDGAVSLLSAVLFNKRLSLNLIYGEFIVGGYDTAPKLFSIDEAG 126
Query: 174 GRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G+ K +F+V GSG +A GVL+ YK +MS EEA +LA +AI + RD +G +
Sbjct: 127 GQGK-DKFTVTGSGGVFALGVLEGDYKDNMSEEEAVKLAYKAISSSIRRDVYTGEGIDIA 185
Query: 233 YVGPNGWKKLSGDDV 247
+ G+KKLS +++
Sbjct: 186 VINKKGYKKLSDEEI 200
>gi|260798450|ref|XP_002594213.1| hypothetical protein BRAFLDRAFT_65062 [Branchiostoma floridae]
gi|229279446|gb|EEN50224.1| hypothetical protein BRAFLDRAFT_65062 [Branchiostoma floridae]
Length = 135
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 67/96 (69%), Gaps = 9/96 (9%)
Query: 31 FSLPLSTDFDEFQK-------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISS 83
FS+P TD EF K + K H GTTTLAF F+ GV+VA DSRA+ G YI+S
Sbjct: 42 FSIPAVTDPAEFLKPFTTGEGNVKIEFDH--GTTTLAFKFQHGVIVAVDSRATAGSYIAS 99
Query: 84 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCR 119
Q+VKK+IEINPY+LGTMAGGAADC FW R L +CR
Sbjct: 100 QTVKKVIEINPYLLGTMAGGAADCSFWERVLAEQCR 135
>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 217
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Query: 37 TDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYM 96
+F E +K ++K KGTTT+ + K+ V++AAD RAS G +++++ V+KI+ I+ +
Sbjct: 5 NNFIEPDTPSKNSIKILKGTTTVGLVAKDSVVLAADRRASAGFFVANKMVRKIVYIDDRI 64
Query: 97 LGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMI 156
T AG AD QF + + + ++ R ++V + L N+L + V +I
Sbjct: 65 GMTTAGSVADLQFIYNYMKNIYHYNVISGNRPVTVKSLATYLTNVLSQSKYFPYLVQILI 124
Query: 157 AGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIY 216
G+D T P L+ +D G + T + GSGSP A GVL+ GY+ D+S EEA +L RA+
Sbjct: 125 GGYD-TQPRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYRPDLSGEEAMDLGARAVL 183
Query: 217 HATFRDAASG 226
A RD+ +G
Sbjct: 184 SAIKRDSFTG 193
>gi|224473832|gb|ACN49171.1| antigen processing proteasome-associated protein [Oryzias
luzonensis]
Length = 217
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA +F GV++ +DSRAS+GG Y+SS+++ K+I+++ + MAG AD Q +
Sbjct: 16 GTTILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVTKT 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD + GP +Y V S
Sbjct: 76 AKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEE-LQAGFITAGWDRKKGPQVYVV-SL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L G ++G SGS Y YG +D+ YK +M+ EE + A A+ A RD SGGVA++
Sbjct: 134 GGMLIGQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVANL 193
Query: 232 YYVGPNGWKKL 242
+ G + +
Sbjct: 194 VVITEAGVEHI 204
>gi|300711728|ref|YP_003737542.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|448296163|ref|ZP_21486224.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
gi|445582886|gb|ELY37226.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
Length = 247
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 12/230 (5%)
Query: 9 ESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVM 68
ES + G + PEL + P LP D E + GTTT+ ++GV+
Sbjct: 11 ESLASSPGQANPYEPELGSLPEADLPEGADAAELKT----------GTTTVGLRAEDGVV 60
Query: 69 VAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRR 128
+A D RAS+G +SS++V+K+ +++P T+AG + Q R L + L++
Sbjct: 61 LATDMRASLGNMVSSKTVQKVEDVHPTGALTIAGSVSAAQSLIRTLRAEVNLYDARQGED 120
Query: 129 ISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSP 188
+S+T S L +N+L S G V ++ G D+ GP +Y +D+ GG + T GSGS
Sbjct: 121 MSMTALSTLTSNLLRS--GGFFIVVPVLGGVDDEGPHIYSMDALGGTTEETYAVSGSGSQ 178
Query: 189 YAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNG 238
+A GVL+ Y+ +S+EEA ++A R++ A RD ASG ++ V G
Sbjct: 179 FALGVLEQHYEEGLSVEEARDVAIRSVGSAVERDTASGNGINIATVTEEG 228
>gi|190359942|sp|A7KE01.1|PB6LA_SALSA RecName: Full=Proteasome subunit beta type-6-A like protein;
AltName: Full=Low molecular mass protein 2-delta-A;
Flags: Precursor
gi|146147390|gb|ABQ01993.1| PSMB9a-like [Salmo salar]
gi|148362164|gb|ABQ59686.1| PSMB9a-like protein [Salmo salar]
gi|209737398|gb|ACI69568.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 217
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q +
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKA 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD + GP +Y V +
Sbjct: 76 AKFQISFHSIQMESPPLVKAAASVLKELCYNNKEE-LQAGFITAGWDRKKGPQVYTV-AL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG D+ YK DMS EE + A+ A+ A RD SGGVA +
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVSGGVAHL 193
Query: 232 YYVGPNGWKK--LSGDDVGELH 251
+ G + + GD + + H
Sbjct: 194 VVITEEGVEHVVIPGDKLPKFH 215
>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
gi|302595749|sp|A4FYA5.1|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanococcus maripaludis
C5]
Length = 219
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 113/192 (58%), Gaps = 2/192 (1%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
++ KGTTT+ + K+GV++A D RA+MG I+ + KK+ +I+ Y+ T+AG D Q
Sbjct: 10 EYMKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSL 69
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE-TGPGLYYV 169
R + + ++H++ ++ + L++N+L+ R L ++ G+D G L+ +
Sbjct: 70 IRIISAEAKIHKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSL 129
Query: 170 DSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
D GG + + F+ GSGSP AYGVL++ Y+ D++I++ +A +A+ A RDA SG
Sbjct: 130 DPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSSAMQRDAYSGNG 189
Query: 229 ASVYYVGPNGWK 240
S+ ++ +G K
Sbjct: 190 ISLAHINKDGVK 201
>gi|409095355|ref|ZP_11215379.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 206
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 112/201 (55%), Gaps = 1/201 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
L AKGTTT+ I ++GV++AAD RA+MG I+S+ V KI +I+ ++ AG D
Sbjct: 5 LSAAKGTTTVGLICRDGVILAADKRATMGNMITSKEVTKIFQIDDHLAIAGAGLVGDILS 64
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
R L + RL+ R +SV + L+ANIL+ RG G ++ G+D T P LY +
Sbjct: 65 MVRLLRAEARLYRARVGREMSVKVLTTLIANILHGGRGYGYFAWFLVGGYD-TEPRLYSI 123
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D+ GG + + GSG +A +L++ + +S+E+ LA +A+ A RD +G
Sbjct: 124 DAAGGVTEEKYVAAGSGMEFALAILENEFSEGLSLEDGMRLAAKAVNAAIKRDVYTGEGI 183
Query: 230 SVYYVGPNGWKKLSGDDVGEL 250
++ V G+++L D++ L
Sbjct: 184 TLVVVTKEGYRELGDDEIKTL 204
>gi|13541494|ref|NP_111182.1| proteasome protease subunit beta [Thermoplasma volcanium GSS1]
gi|74575802|sp|Q97AZ7.1|PSB_THEVO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|14324878|dbj|BAB59804.1| proteasome beta subunit [Thermoplasma volcanium GSS1]
gi|239061209|emb|CAZ48528.1| 20S proteasome beta subunit [Thermoplasma volcanium GSS1]
Length = 211
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ + V++A + R +M +I ++ KK+ +I+ Y T+AG D Q R +
Sbjct: 8 GTTTVGITLTDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYM 67
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L+ L + + + + LL+N+L + M V ++ G D T P ++ +D+ GG
Sbjct: 68 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID-TSPHVFSIDAAGG 126
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ S GSGSP+ YGVL+S Y +SI+E +L RAI A RD+ASGG+ V +
Sbjct: 127 SVEDIYASTGSGSPFVYGVLESQYNEKLSIDEGVDLVIRAISAAKQRDSASGGMIDVAVI 186
Query: 235 -GPNGWKKLSGDDV 247
+G+ +L + +
Sbjct: 187 TKKDGYVQLPTEQI 200
>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 211
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
G TT+ K+GV++A++ R S GG+I S++ KK+ ++ + AG AD Q R L
Sbjct: 9 GATTVGIRVKDGVVLASEKRVSYGGFIVSKAGKKVFKVTDRIGIAFAGLYADMQALARIL 68
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ + +E++ + V A+KLL+NILY+ + + ++ G DETG LY +D G
Sbjct: 69 SAEIQYYEVSTGKPARVYAAAKLLSNILYASKLIPFITEVLVGGVDETGSHLYVMDPVGS 128
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
++ ++GSG+ A G+L++ Y+ DMSI+EA ELA +A+ A RDA SG
Sbjct: 129 VIEDDYAALGSGAAIAIGILEANYRKDMSIDEAKELAEKAVRIAIERDAISG 180
>gi|119719224|ref|YP_919719.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595702|sp|A1RWY6.1|PSB1_THEPD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119524344|gb|ABL77716.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 200
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 1/176 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K KGTTT+ + K+ V++AAD RA+ G +I+++ KI+EI+ ++ T+AG D Q
Sbjct: 8 KVLKGTTTVGLVGKDFVVLAADRRATAGYFIANKQTWKIVEIDSHIAATIAGTVGDAQQL 67
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
L ++ R ++ + V + L + IL+ YR + LSV +I G D GP L+ VD
Sbjct: 68 VDRLRVEARYYKTITGDSMPVKSVATLASLILFQYRPI-LSVQMLIGGVDSDGPSLFSVD 126
Query: 171 SEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
G + + GSGSPYA +L+ Y+ D+S+EEA LA +A+ A RD SG
Sbjct: 127 WLGTVTREKYTATGSGSPYAVSLLEHEYREDLSLEEAVNLAVKAVNIALARDPGSG 182
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 114/194 (58%), Gaps = 1/194 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT A K+GV++AAD+RAS G +I+ + V KI +++ ++ T+AGG AD Q
Sbjct: 18 KGTTTCALTCKDGVVLAADTRASAGLFIADRHVMKIQKVDQHLAMTIAGGVADAQNLVDT 77
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
+ L+ NK + V A++L +NIL++ R V ++AG+ + G ++ +D
Sbjct: 78 MRYNANLYRFQNKELMPVKSAARLCSNILFNQRYFPYYVQIIMAGYTKNEGSQIHNIDLF 137
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G S GSGSP AYG L+S Y+ MS+ +A ++A +AI A R+A +G +V
Sbjct: 138 GSMTTEKFISTGSGSPVAYGYLESEYRDGMSVNDAYKVAMQAIAAAIRRNAGTGDSINVV 197
Query: 233 YVGPNGWKKLSGDD 246
+ NG+++LS ++
Sbjct: 198 IIDKNGYRELSKEE 211
>gi|297844206|ref|XP_002889984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335826|gb|EFH66243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 113
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 203 SIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTV 262
++EE +ELARR+IYHATFRD ASGGVASVY+VGP GW KLSGDDV ELHYHYYPV P+
Sbjct: 44 AVEETSELARRSIYHATFRDGASGGVASVYHVGPEGWTKLSGDDVEELHYHYYPVAPAIA 103
Query: 263 EQEMAE 268
EQ M E
Sbjct: 104 EQVMEE 109
>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
gi|74567841|sp|Q6L181.1|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
Length = 210
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 112/194 (57%), Gaps = 2/194 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ + V++ DSRA+M +IS+++ +K+ +I+ Y T+AG D Q R +
Sbjct: 7 GTTTVGITAGDYVIMGTDSRATMENFISNKNAQKLYQIDNYAAMTIAGLVGDAQVLVRYM 66
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L+ + K + + A+ LL+N+L + V ++ G+D T P ++ +D+ GG
Sbjct: 67 KAEMELYRVQRKVSMPIDAAATLLSNMLNQTKFYPYMVQLLVGGYD-TKPHIFSIDAAGG 125
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ S GSGSP+ YGVL++ Y+ +MS+++ L +AI A RD+ASG + + V
Sbjct: 126 SVEDIYASTGSGSPFVYGVLEAEYQKNMSLDDGINLVIKAISAAKQRDSASGNMLQLGVV 185
Query: 235 GP-NGWKKLSGDDV 247
P G+ LS D++
Sbjct: 186 DPKKGFYYLSEDEI 199
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
Length = 219
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 112/192 (58%), Gaps = 2/192 (1%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
++ KGTTT+ + +GV++A D RA+MG I+ + KK+ +I+ Y+ T+AG D Q
Sbjct: 10 EYMKGTTTVGLLCNDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSL 69
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE-TGPGLYYV 169
R + + +++++ ++ + L++N+L+ R L ++ G+D G L+ +
Sbjct: 70 IRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSL 129
Query: 170 DSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
D GG + + F+ GSGSP AYGVL+S YK D++IE+ +A +A+ A RDA SG
Sbjct: 130 DPVGGINEESSFTATGSGSPTAYGVLESEYKSDIAIEKGLLIAVKALSSAMQRDAYSGNG 189
Query: 229 ASVYYVGPNGWK 240
S+ ++ +G K
Sbjct: 190 ISLAHINKDGVK 201
>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG8G15]
Length = 210
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 35 LSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINP 94
++T+ DE K GTTT+ +GV++ AD RAS G +I++ + KI +I
Sbjct: 1 MTTNIDE---------KILHGTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYD 51
Query: 95 YMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGT 154
++ T+AGG AD Q L +H + I + ++L + + + RG
Sbjct: 52 HVGLTLAGGVADAQNLTDILRYHANIHAVQKNENIPIRSLARLCSLVFHQNRGYPFIADI 111
Query: 155 MIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRA 214
++ G+D+ GP L+ +D G K + + GSGSP AYGVL+ Y+ D+++E+A +A RA
Sbjct: 112 LLGGYDQDGPQLFNIDMFGSVEKKSYVTTGSGSPVAYGVLEDEYRDDLTLEDAKGIALRA 171
Query: 215 IYHATFRDAASGGVASVYYVGPNGWKKLS 243
+ A R+ +G ++ + NG++ L+
Sbjct: 172 VKAAIVRNIGTGDGINIAAIDKNGFQLLT 200
>gi|295901495|dbj|BAJ07259.1| proteasome subunit, beta type 9-like [Oryzias latipes]
gi|295901526|dbj|BAJ07280.1| proteasome subunit, beta type 9-like [Oryzias latipes]
Length = 217
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA +F GV++ +DSRAS+GG Y+SS+++ K+I+++ + MAG AD Q +
Sbjct: 16 GTTILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVTKT 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD+ GP +Y V S
Sbjct: 76 AKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEE-LQAGFITAGWDKKKGPQVYVV-SL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L ++G SGS Y YG +D+ YK +M+ EE + A A+ A RD SGGVA++
Sbjct: 134 GGMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVANL 193
Query: 232 YYVGPNGWKKL 242
+ G + +
Sbjct: 194 VVITEEGVEHI 204
>gi|325968211|ref|YP_004244403.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323707414|gb|ADY00901.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 219
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSV-KKIIEINPYMLGTMAGGAADCQFWHRN 113
GTTT+ + +GV++A D R + G YI+ + KI +I+ ++ TM+GG AD Q +
Sbjct: 18 GTTTVGIVINDGVVLATDRRVTAGYYIAHRKKGVKIWKIDNHIAATMSGGVADLQKVLDS 77
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
L +++ + IS+ + + +++S R V ++ GWD + GP +Y +D
Sbjct: 78 LTATAIQYKVDTGKPISIRALANYASLVVFSSRPFVYLVHMILGGWDPDEGPVIYMLDFF 137
Query: 173 GGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
G K T F + GSGSP A+GVL+ GYK DMSIEEA LA RA+ A + D SG V
Sbjct: 138 GTLTKETEFMATGSGSPTAFGVLEDGYKRDMSIEEAVRLAVRAVRSAIYHDPGSGEGIDV 197
Query: 232 YYVGPNGWKKL 242
+ G+K++
Sbjct: 198 VTITKEGYKEV 208
>gi|300708256|ref|XP_002996311.1| hypothetical protein NCER_100618 [Nosema ceranae BRL01]
gi|239605602|gb|EEQ82640.1| hypothetical protein NCER_100618 [Nosema ceranae BRL01]
Length = 230
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 5/212 (2%)
Query: 31 FSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKII 90
F P+ + + E Q++ L GTT +A + EGV+V AD R SMG Y+SS+ K+
Sbjct: 13 FVPPMDSQYIESQENFSTNLPEMTGTTIMAVKYDEGVLVGADCRTSMGTYVSSRFTDKLT 72
Query: 91 EINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGL 150
+I+ + +G AAD Q + + + +K SV A+ + I+ Y+ L
Sbjct: 73 KISDNIYCCRSGSAADTQAIAQYVKEVVQRSSFIDKEIPSVKKAAMIAKEII--YKNPSL 130
Query: 151 SVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAE 209
G +IAG+D T P +Y + S GG + + + GSGS Y YG+ D+ YK +M++EEA E
Sbjct: 131 LAGLIIAGYD-TSPKIYNI-SLGGTITEADWQIGGSGSAYIYGLCDTLYKDNMTLEEAIE 188
Query: 210 LARRAIYHATFRDAASGGVASVYYVGPNGWKK 241
++AI A RD ASGG + + G K+
Sbjct: 189 FVKQAITCAIRRDNASGGSIRMASISREGVKR 220
>gi|190359943|sp|A7KII6.1|PB6LB_SALSA RecName: Full=Proteasome subunit beta type-6-B like protein;
AltName: Full=Low molecular mass protein 2-delta-B;
Flags: Precursor
gi|148362125|gb|ABQ59652.1| PSMB9b-like protein [Salmo salar]
gi|262189356|gb|ACY30374.1| PSMB9b-like protein [Salmo salar]
Length = 217
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q +
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKA 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD + GP +Y V +
Sbjct: 76 AKFQISFHSIQMESPPLVKAAASVLKELCYNNKEE-LQAGFITAGWDRKKGPQVYTV-AL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG D+ YK DMS EE + A A+ A RD SGGVA +
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHL 193
Query: 232 YYVGPNGWKK--LSGDDVGELH 251
+ G + + GD + + H
Sbjct: 194 VVITEEGVEHVVIPGDKLPKFH 215
>gi|209737734|gb|ACI69736.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 212
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q +
Sbjct: 11 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKA 70
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD + GP +Y V +
Sbjct: 71 AKFQISFHSIQMESPPLVKAAASVLKELCYNNKEE-LQAGFITAGWDRKKGPQVYTV-AL 128
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG D+ YK DMS EE + A A+ A RD SGGVA +
Sbjct: 129 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHL 188
Query: 232 YYVGPNGWKK--LSGDDVGELH 251
+ G + + GD + + H
Sbjct: 189 VVITEEGVEHVVIPGDKLPKFH 210
>gi|59275961|dbj|BAD89548.1| proteasome subunit [Oncorhynchus mykiss]
gi|306494798|gb|ADM95870.1| PSMB9L [Oncorhynchus mykiss]
Length = 217
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGY-ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA F GV++ +DSRAS+GGY +SS+++ K+I+++ + +AG AD Q +
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKA 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD + GP +Y V +
Sbjct: 76 AKFQISFHSIQMESPPLVKAAASVLKELCYNNKEE-LQAGFITAGWDRKKGPQVYTV-AL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG D+ YK DMS EE + A A+ A RD SGGVA +
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHL 193
Query: 232 YYVGPNGWKK--LSGDDVGELH 251
+ G + + GD + + H
Sbjct: 194 VVITEEGVEHIVIPGDKLPKFH 215
>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
A3]
gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
voltae A3]
Length = 215
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 3/193 (1%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K+ KGTTT+ +GV++A D RA+MG I+ + KK+ I+ Y+ T+AG D Q
Sbjct: 6 KYMKGTTTVGIACADGVVLATDKRATMGNLIADKEAKKLYPIDEYIAMTIAGSVGDAQSL 65
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG--PGLYY 168
R + + +++++ +S + L++N+L+ R L ++ G+D P LY
Sbjct: 66 VRIISAETKIYKMRTGNNMSPLACTTLMSNVLHGNRHFPLMNQLIVGGYDVCNDEPQLYS 125
Query: 169 VDSEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGG 227
+D+ GG + T F S GSGSP AYGVL++ Y + A +LA +AI A RDA SG
Sbjct: 126 LDAVGGINEETTFTSTGSGSPTAYGVLEAEYVNKLKTSAALKLAVKAISSAMKRDAYSGN 185
Query: 228 VASVYYVGPNGWK 240
S+ + NG K
Sbjct: 186 GISLAKIDKNGVK 198
>gi|185133585|ref|NP_001117731.1| low molecular mass protein 2 [Oncorhynchus mykiss]
gi|5823092|gb|AAD53037.1|AF115540_1 low molecular mass protein 2 [Oncorhynchus mykiss]
Length = 217
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGY-ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA F GV++ +DSRAS+GGY +SS+++ K+I+++ + +AG AD Q +
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKA 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD + GP +Y V +
Sbjct: 76 AKFQISFHSIQMESPPLVKAAASVLKELCYNNKEE-LQAGFITAGWDRKKGPQVYTV-AL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG D+ YK DMS EE + A A+ A RD SGGVA +
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHL 193
Query: 232 YYVGPNGWKK--LSGDDVGELH 251
+ G + + GD + + H
Sbjct: 194 VVITEEGVEHIVIPGDKLPKFH 215
>gi|59275970|dbj|BAD89556.1| proteasome subunit [Oncorhynchus mykiss]
Length = 212
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q +
Sbjct: 11 GTTILAVTFNGGVIIGSDSRASIGGNYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKA 70
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD + GP +Y V +
Sbjct: 71 AKFQISFHSIQMESPPLVKAAASVLKELCYNNKEE-LQAGFITAGWDRKKGPQVYTV-AL 128
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG D+ YK DMS EE + A A+ A RD SGGVA +
Sbjct: 129 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALAMGRDNVSGGVAHL 188
Query: 232 YYVGPNGWKK--LSGDDVGELH 251
+ G + + GD + + H
Sbjct: 189 VVITEEGVEHVVIPGDKLPKFH 210
>gi|62122594|dbj|BAD93262.1| PSMB9-like [Oryzias latipes]
Length = 217
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA +F GV++ +DSRAS+GG Y+SS+++ K+I+++ + MAG AD Q +
Sbjct: 16 GTTILAAVFDRGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVTKT 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD+ GP +Y V S
Sbjct: 76 AKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEE-LQAGFITAGWDKKKGPQVYVV-SL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG + ++G SGS Y YG +D+ YK +M+ EE + A A+ A RD SGGVA++
Sbjct: 134 GGMMISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVANL 193
Query: 232 YYVGPNGWKKL 242
+ G + +
Sbjct: 194 VVITEAGVEHI 204
>gi|167043167|gb|ABZ07876.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_ANIW141J13]
Length = 208
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ +GV++ AD RAS G +I++ + KI +I ++ T+AGG AD Q L
Sbjct: 10 GTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGLTLAGGVADAQNLTDIL 69
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+H + I + ++L + + + RG ++ G+D GP L+ +D G
Sbjct: 70 RYHANVHAVQKNENIPIKSLARLCSLVFHQNRGYPFIADILLGGYDRDGPALFNIDMFGS 129
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K + + GSGSP AYGVL+ Y+ D+++E+A +A RA+ A R+ +G ++ +
Sbjct: 130 VEKKSYVTTGSGSPVAYGVLEDEYRDDLTLEDAKLIALRAVKAAIVRNIGTGDGINIAAI 189
Query: 235 GPNGWKKLS 243
NG++ L+
Sbjct: 190 NKNGFQLLT 198
>gi|374327726|ref|YP_005085926.1| proteasome beta subunit [Pyrobaculum sp. 1860]
gi|356642995|gb|AET33674.1| proteasome beta subunit [Pyrobaculum sp. 1860]
Length = 201
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 107/188 (56%), Gaps = 1/188 (0%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ + ++GV++A D R + G YI+ + +KI +I+ ++ TM+GG AD Q L
Sbjct: 2 TTTVGIVVRDGVILATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLT 61
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
++ R + + +K+ I ++ ++ IL+ R V ++I G DE G LY +D G
Sbjct: 62 LRAREYRMEHKKPIPISALVNYMSLILFYSRPYVYIVHSIIGGVDEGGAALYMIDWLGTV 121
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVYYV 234
+ + GSGSPYA G L+ GY+ DMS+EEA +LA +++ A D SG G+ V
Sbjct: 122 TRERYIATGSGSPYAKGALEVGYREDMSLEEAIDLAIKSVKAAIRNDPGSGEGIDVVVIT 181
Query: 235 GPNGWKKL 242
G++++
Sbjct: 182 KKEGFRRV 189
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 110/197 (55%), Gaps = 1/197 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + K+GV++AAD RAS+G + S++V K+ I+ ++ AG D R
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L + +L+ + +SV + L +N+L+ R M +IAG DE PGLY +D G
Sbjct: 66 LRAEAKLYRARVGKEMSVKALATLTSNVLHGNRFMPYFGWFLIAGHDEK-PGLYSIDMAG 124
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G + + GSG +A+ +L+ Y+ DM +E +LA RAI AT RD +GG ++
Sbjct: 125 GVTEDKFTAAGSGMEFAFSILEENYREDMPLEGGVKLALRAIKAATRRDVFTGGGVTLVT 184
Query: 234 VGPNGWKKLSGDDVGEL 250
V G+++ S +++ L
Sbjct: 185 VTREGYREWSDEEIKAL 201
>gi|319996713|ref|NP_001188447.1| proteasome subunit, beta type 9-like [Oryzias latipes]
gi|18157531|dbj|BAB83846.1| PSMB9-like [Oryzias latipes]
gi|295901528|dbj|BAJ07281.1| proteasome subunit, beta type 9-like [Oryzias latipes]
Length = 217
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA +F GV++ +DSRAS+GG Y+SS+++ K+I+++ + MAG AD Q +
Sbjct: 16 GTTILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVTKT 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD+ GP +Y V S
Sbjct: 76 AKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEE-LQAGFITAGWDKKKGPQVYVV-SL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG + ++G SGS Y YG +D+ YK +M+ EE + A A+ A RD SGGVA++
Sbjct: 134 GGMMISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVANL 193
Query: 232 YYVGPNGWKKL 242
+ G + +
Sbjct: 194 VVITKEGVEHI 204
>gi|224473815|gb|ACN49156.1| proteasome beta 9 like subunit [Oryzias dancena]
Length = 217
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA +F GV++ +DSRASMGG ++SS+++ K+I+++ + MAG AD Q +
Sbjct: 16 GTTILAAVFDGGVVIGSDSRASMGGEFVSSKTINKVIQVHDRIFCCMAGSLADAQAVTKT 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD+ GP +Y V S
Sbjct: 76 AKFQLSFHSVQMENPPLVIAAASILKELCYNNKDE-LQAGFITAGWDKKKGPQVYVV-SL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L ++G SGS Y YG +D+ YK +M+ EE + A A+ A RD SGGV ++
Sbjct: 134 GGMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVVNL 193
Query: 232 YYVGPNGWKKL 242
+ G + +
Sbjct: 194 VVITEAGAEHI 204
>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595741|sp|A3MS44.1|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126248370|gb|ABO07461.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum calidifontis
JCM 11548]
Length = 201
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ + K+GV++A D R + G YI+ ++ +KI +I+ ++ TM+GG AD Q L
Sbjct: 2 TTTVGIVAKDGVVLATDKRVTAGYYIAHKAGEKIWKIDDHVAATMSGGVADLQSVLSFLS 61
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGG 174
++ R + + +KR I + ++ +L+ R V +++ G D E GP LY VD G
Sbjct: 62 LRAREYRVEHKRPIPIRALVNYVSLLLFYSRPYIYLVHSIVGGVDAEEGPVLYMVDWLGT 121
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVYY 233
K + GSGSPYA G L+ Y+ D++I+EA ELA RA+ A D SG G+ V
Sbjct: 122 VTKEKYIATGSGSPYAKGALEVAYREDLTIDEAVELAIRAVKAAIRNDPGSGEGIDVVTI 181
Query: 234 VGPNGWKKL 242
+G++++
Sbjct: 182 TKSDGFRRV 190
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ +EGV++A D RASMG +SS+ V+K+ EI+P T+AG + Q +L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ RL+E +S+ S L+ N L S G V ++ G DETGP +Y +D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRS--GGFYVVQPILGGVDETGPHIYSIDPAGS 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
L+ GSGS YA GVL+ ++ +SIEEA +A +AI A RD ASG ++ V
Sbjct: 167 ILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGINIAVV 226
Query: 235 GPNG 238
+G
Sbjct: 227 TEDG 230
>gi|318037293|ref|NP_001187911.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
gi|308324307|gb|ADO29288.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
Length = 214
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT +A + GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q R
Sbjct: 13 GTTIVAVKYNGGVIIGSDSRASVGGSYVSSKAINKLIQVHDRIFCCIAGSLADAQHVTRV 72
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
+ H + V A+ +L + YS R L G + AGWD+ GP +Y V S
Sbjct: 73 AKFQLSFHSIQMGSPPLVKAAATVLKELCYSNR-EDLEAGFITAGWDKKKGPQVYTV-SM 130
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG +D+ YK DMS EE + + A+ A RD SGG+A +
Sbjct: 131 GGMLISQPFTIGGSGSTYMYGYMDAKYKPDMSREECVQFVKNALALAIGRDNVSGGIAHL 190
Query: 232 YYVGPNG 238
+ G
Sbjct: 191 VVITEGG 197
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 110/194 (56%), Gaps = 1/194 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + K+GV++AAD RAS+G I +++V KI +I+ ++ AG D R
Sbjct: 9 KGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRL 68
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L + +L+ + +R+SV + LLANI+ + ++ G+DE P LY VD G
Sbjct: 69 LRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEK-PKLYSVDMVG 127
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G + + GSG +AY +LDS YK ++++EE +LA +AI A RD SG V
Sbjct: 128 GITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVT 187
Query: 234 VGPNGWKKLSGDDV 247
+ G+K+LS ++
Sbjct: 188 ITKEGYKELSDSEL 201
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ +EGV++A D RASMG +SS+ V+K+ EI+P T+AG + Q +L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ RL+E +S+ S L+ N L S G V ++ G DETGP +Y +D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRS--GGFYVVQPILGGVDETGPHIYSIDPAGS 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
L+ GSGS YA GVL+ ++ +SIEEA +A +AI A RD ASG ++ V
Sbjct: 167 ILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGINIAVV 226
Query: 235 GPNG 238
+G
Sbjct: 227 TEDG 230
>gi|209733156|gb|ACI67447.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 217
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT L F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q +
Sbjct: 16 GTTILTVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKA 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD + GP +Y V +
Sbjct: 76 AKFQISFHSIQMESPPLVKAAASVLKELCYNNKEE-LQAGFITAGWDRKKGPQVYTV-AL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG D+ YK DMS EE + A+ A+ A RD +GGVA +
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVTGGVAHL 193
Query: 232 YYVGPNGWKK--LSGDDVGELH 251
+ G + + GD + + H
Sbjct: 194 VVITEEGVEHVVIPGDKLPKFH 215
>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595852|sp|A4YIE0.1|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 217
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Query: 39 FDEFQ-KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYML 97
F EF+ + +K +K KGTTT+ + K+ V++AAD RAS G +++++ V+KI+ I+ +
Sbjct: 4 FGEFESRPSKDKIKILKGTTTVGLVVKDAVILAADRRASAGFFVANKMVRKIVYIDDRIG 63
Query: 98 GTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIA 157
T AG AD QF + + + ++ R ++V + L NIL + V ++
Sbjct: 64 MTTAGSVADLQFIYNYMKNIYHYNLISGNRPVTVKSLATYLTNILSQNKYFPYLVQILMG 123
Query: 158 GWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYH 217
G+D T P L+ +D G + T + GSGSP A GVL+ GY D++ ++A +LA RA+
Sbjct: 124 GYD-TQPRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYSPDLTGDQAMDLAARAVMS 182
Query: 218 ATFRDAASG 226
A RD+ +G
Sbjct: 183 AIKRDSFTG 191
>gi|196000078|ref|XP_002109907.1| hypothetical protein TRIADDRAFT_21588 [Trichoplax adhaerens]
gi|190588031|gb|EDV28073.1| hypothetical protein TRIADDRAFT_21588 [Trichoplax adhaerens]
Length = 229
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 1/196 (0%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
+K +A GTT +FK+G+++ AD+RAS G +I+ ++ KI I+P M AG
Sbjct: 4 KKGIQAAKARKTGTTIAGIVFKDGIILGADTRASEGTFIADKNCSKIHYISPNMYCCGAG 63
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AAD ++ R + K LH L +R+ V A +L +L+ Y+G + ++ G D T
Sbjct: 64 TAADTEYVTRLISSKIELHSLTTERKPRVVAALTMLKQMLFRYQGY-VGAYLVLGGVDST 122
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GP LY V + G K ++GSGS A V + Y +M ++EA +L R AI F D
Sbjct: 123 GPHLYTVHARGSSDKLPYVTMGSGSLAAMAVFEDRYHVNMELDEAKQLVRDAIAAGIFND 182
Query: 223 AASGGVASVYYVGPNG 238
SG + + +G
Sbjct: 183 LGSGSNVDLCVITKDG 198
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 109/198 (55%), Gaps = 2/198 (1%)
Query: 41 EFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTM 100
E + D+ + GTTT+ ++GV++A D RASMG +SS+ V+K+ EI+P T+
Sbjct: 35 ERRADSLGDKETKTGTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTI 94
Query: 101 AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
AG + Q +L + RL+E +S+ S L+ N L S G V ++ G D
Sbjct: 95 AGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLRS--GGFYVVQPILGGVD 152
Query: 161 ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATF 220
ETGP +Y +D G L+ GSGS YA GVL+ ++ +SI+EA ++A +AI A
Sbjct: 153 ETGPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIDEAKQVATKAIRSAVE 212
Query: 221 RDAASGGVASVYYVGPNG 238
RD ASG ++ V +G
Sbjct: 213 RDLASGNGINIAVVTEDG 230
>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 223
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 64 KEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHEL 123
K+ V+VA D+R + G +++ + KK++ + P++ T+AG AD Q + +++
Sbjct: 25 KDAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 84
Query: 124 ANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV 183
+ +S+ ++L +++++S R ++AG D GP LY +D G + +
Sbjct: 85 MRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGPHLYNLDPFGSVTEEKLIAT 144
Query: 184 GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN-GWKKL 242
GSGSP AYGVL+ Y+ DM A ELA +A+ A RDA SG V YV + G+ +L
Sbjct: 145 GSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKDKGYGEL 204
Query: 243 SGDDVGELHYHYYPVTPST 261
S D+ L+ Y+ P T
Sbjct: 205 SLDEKAPLYRKYFNYLPIT 223
>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485300|dbj|BAJ50954.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 64 KEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHEL 123
K+ V+VA D+R + G +++ + KK++ + P++ T+AG AD Q + +++
Sbjct: 22 KDAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 81
Query: 124 ANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV 183
+ +S+ ++L +++++S R ++AG D GP LY +D G + +
Sbjct: 82 MRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGPHLYNLDPFGSVTEEKLIAT 141
Query: 184 GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN-GWKKL 242
GSGSP AYGVL+ Y+ DM A ELA +A+ A RDA SG V YV + G+ +L
Sbjct: 142 GSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKDKGYGEL 201
Query: 243 SGDDVGELHYHYYPVTPST 261
S D+ L+ Y+ P T
Sbjct: 202 SLDEKAPLYRKYFNYLPIT 220
>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595692|sp|A8AA46.1|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 198
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
G T + K+GV++AA+ R S GG+I S++ +K+ ++ M AG AD Q R L
Sbjct: 5 GATAVGIKVKDGVVLAAERRMSYGGFIMSKAARKVFKVGDRMGMACAGLYADMQAIARAL 64
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ R +E++NKR++ V A++LL ILYS + L T+ G+D+ P ++ +D G
Sbjct: 65 ENEIRYYEISNKRKMKVRSAARLLGLILYSNKLFPLMTETVFGGYDDE-PRIFVLDPVGS 123
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ +VG+G+P A +LD Y+ DMS+EEA LA ++ A+ RD+ SG V +
Sbjct: 124 VIEEKYSAVGTGAPLAMALLDKEYREDMSLEEAQNLAIESVKVASGRDSLSGDGIDVLVI 183
Query: 235 GPNGWK 240
P G K
Sbjct: 184 -PFGGK 188
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 99/183 (54%)
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
T L GV++A + R + GY+ S++ +K+ I ++ AG D QF R L +
Sbjct: 19 TVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALRM 78
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+ +EL R I V G +K+L+ ILYSY+ L ++ G+DE GP +Y +D G +
Sbjct: 79 EAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQIYVLDPVGSLI 138
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
+ ++GSG P A G+++ Y+ D+ ++EA +LA AI A RDA SG V +
Sbjct: 139 EDKYVALGSGGPIALGIIEKEYREDIDVDEAEKLAVSAIREAIERDAVSGDGVDVLRITE 198
Query: 237 NGW 239
G+
Sbjct: 199 EGY 201
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 104/184 (56%), Gaps = 2/184 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ ++GV++A D RASMG +SS+ V+K+ EI+P T+AG + Q +L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ RL+E +S+ S L+ N L S G V ++ G DETGP +Y +D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRS--GGFYVVQPILGGVDETGPHIYSIDPAGS 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
L+ GSGS YA GVL+ ++ +SI+EA ++A +AI A RD ASG ++ V
Sbjct: 167 ILEEEYTVTGSGSQYALGVLEQEFEDGLSIDEAKQVATKAIRSAVERDLASGNGINIAVV 226
Query: 235 GPNG 238
+G
Sbjct: 227 TEDG 230
>gi|448576104|ref|ZP_21642147.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
gi|445729784|gb|ELZ81378.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
Length = 243
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 2/184 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ ++GV++A D RASMG +SS+ V+K+ EI+P T+AG + Q NL
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISNL 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ RL+E +S+ S L+ N L S G V ++ G DE G +Y +D G
Sbjct: 109 KAEVRLYEARRGEDMSMQALSTLVGNFLRS--GAFFVVQPILGGVDEDGGHIYSIDPAGS 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
L+ GSGS YA GVL+ Y D+S++EA ++A AI A RD ASG ++ V
Sbjct: 167 ILEEEYTVTGSGSQYALGVLEREYSDDLSVDEAKQVATNAIRAAVERDLASGNGINIAVV 226
Query: 235 GPNG 238
G
Sbjct: 227 TDEG 230
>gi|294889671|ref|XP_002772914.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
gi|239877494|gb|EER04730.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
Length = 204
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 104/183 (56%), Gaps = 4/183 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTT +A FK+GV++ ADSR S GGY++++ +K+ ++ + +G AAD QF +
Sbjct: 7 GTTIMAMKFKDGVVLGADSRTSTGGYVANRVSRKVTRLHDRIFVCRSGSAADTQFLSSKV 66
Query: 115 G--IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDS 171
+ ++L R V A+ L+ + Y+ + L+ G ++AGWD+T GP +Y +
Sbjct: 67 KYFLNAHANDLPLDRLPKVKTAANLMRLLAYNNKQY-LTAGLIVAGWDQTEGPQVYSIPL 125
Query: 172 EGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
G +K + GSGS Y G++D Y+ DMS EEA + +A+ HA RD +SGGV V
Sbjct: 126 GGTIIKQNIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKAVAHAMARDGSSGGVIRV 185
Query: 232 YYV 234
V
Sbjct: 186 TTV 188
>gi|240104109|ref|YP_002960418.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595730|sp|C5A2D5.1|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 200
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ KEGV++AAD++AS+G + + +++KI+ I + T AG D Q R L
Sbjct: 7 GTTTVGIKVKEGVVLAADTQASLGNMVETLNIRKILPITDRIAITTAGSVGDVQALARML 66
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ R ++ R ++ + LL+NIL + V +I G+ + P L VD+ GG
Sbjct: 67 EAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQIIIGGYVDK-PELASVDALGG 125
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
+ + GSGSP+A +++ GY+ DMSIEEA ELA RA+ A RD +G
Sbjct: 126 LVFEKYTATGSGSPFAIAIIEDGYREDMSIEEAKELAVRAVKTAGKRDVYTG 177
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 116/199 (58%), Gaps = 2/199 (1%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
++ KGTTT+ + K+GV++A D RA+MG I+ + KK+ +I+ Y+ T+AG D Q
Sbjct: 10 EYMKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSL 69
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE-TGPGLYYV 169
R + + +++++ ++ + L++N+L+ R L ++ G+D G L+ +
Sbjct: 70 IRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSL 129
Query: 170 DSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
D GG + + F+ GSGSP AYGVL++ Y+ D++I++ +A +A+ A RDA SG
Sbjct: 130 DPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSSAMQRDAYSGNG 189
Query: 229 ASVYYVGPNGWKKLSGDDV 247
S+ ++ +G S +++
Sbjct: 190 ISLAHINKDGVNIYSDEEI 208
>gi|224473798|gb|ACN49142.1| proteasome beta 9 like subunit [Oryzias dancena]
Length = 217
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA +F GV++ +DSRASMGG ++SS+++ K+I++ + MAG AD Q +
Sbjct: 16 GTTILAAVFDGGVVIGSDSRASMGGEFVSSKTINKVIQVYDRIFCCMAGSLADAQAVTKT 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD+ GP +Y V S
Sbjct: 76 AKFQLSFHSVQMENPPLVIAAASILKELCYNNKDE-LQAGFITAGWDKKKGPQVYVV-SL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L ++G SGS Y YG +D+ YK +M+ EE + A A+ A RD SGGV ++
Sbjct: 134 GGMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVVNL 193
Query: 232 YYVGPNGWKKL 242
+ G + +
Sbjct: 194 VVITEAGAEHI 204
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 112/195 (57%), Gaps = 3/195 (1%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + K+GV++AAD RAS+G + S++V K+ I+ ++ AG D R
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG-PGLYYVDSE 172
L + +L+ + +SV + L +N+L+ R M +IAG TG PGLY VD
Sbjct: 66 LRAEAKLYRAKVGKEMSVKALATLTSNVLHGSRFMPYFGWFLIAG--HTGEPGLYSVDMA 123
Query: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
GG + + GSG +A+ +L++ +K +M++EE +LA RAI AT RD +GG ++
Sbjct: 124 GGVTEDRFTAAGSGMEFAFSILEAEFKENMTLEEGVKLALRAIKAATRRDVFTGGGVTLV 183
Query: 233 YVGPNGWKKLSGDDV 247
V G+K+ S +++
Sbjct: 184 TVTDEGYKEWSEEEI 198
>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 1/199 (0%)
Query: 64 KEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHEL 123
K+ V+VA D+R + G +++ + KK+ + P++ T+AG AD Q + +++
Sbjct: 22 KDAVVVATDTRVTSGFFVAHRRGKKVFPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 81
Query: 124 ANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV 183
+ +S+ ++L +++++S R ++AG D GP LY +D G + +
Sbjct: 82 MRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGPHLYNLDPFGSVTEEKLIAT 141
Query: 184 GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPN-GWKKL 242
GSGSP AYGVL+ Y+ DM A ELA +A+ A RDA SG V YV + G+ +L
Sbjct: 142 GSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKDKGYGEL 201
Query: 243 SGDDVGELHYHYYPVTPST 261
S D+ L+ Y+ P T
Sbjct: 202 SLDEKAPLYRKYFNYLPIT 220
>gi|308321308|gb|ADO27806.1| proteasome subunit beta type-9-a like protein [Ictalurus furcatus]
Length = 214
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT +A + GV++ +DSRAS+GG Y+SS+ + K+I++ + +AG AD Q R
Sbjct: 13 GTTIVAVKYNGGVIIGSDSRASIGGSYVSSKVINKLIQVRDRIFCCIAGSLADAQHVTRV 72
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSE 172
+ H + V A+ +L + YS R L G + AGWD+ GP +Y V S
Sbjct: 73 AKFQLSFHSIQMGSPPLVKAAATVLKELCYSNR-EDLQAGFITAGWDKKKGPQMYTV-SM 130
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG +D+ YK DMS EE + + A+ A RD SGG+A +
Sbjct: 131 GGMLISQPFTIGGSGSTYIYGYMDAKYKPDMSREECIQFVKNALALAIGRDNVSGGIAHL 190
Query: 232 YYVGPNG 238
+ G
Sbjct: 191 VVITEGG 197
>gi|320101460|ref|YP_004177052.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753812|gb|ADV65570.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 208
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K TTT+ + + V++AAD RA+ G + ++VKKI I Y T++G AD Q+
Sbjct: 3 KAESKTTTVGLVVGDYVVLAADKRATAGPMVYHKAVKKISRITDYAALTISGLVADAQYI 62
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSY-RGMGLSVGTMIAGWDETGPGLYYV 169
R +E + ISV + ++ +L Y R + V ++ G D TG LYY+
Sbjct: 63 VEYARFLARDYEAETGKPISVGALASRISLVLSVYLRYVPFIVQLLLGGRDHTGASLYYM 122
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D G + + GSGSP A+GVL+ GY+ D+S+EEA LA +A+ A RD +G
Sbjct: 123 DLYGSVTREKYMATGSGSPVAFGVLEQGYRSDLSLEEAKALAFKAVSSAIMRDGFTGEGV 182
Query: 230 SVYYVGPNGW 239
V +GP G+
Sbjct: 183 DVVVIGPQGY 192
>gi|448591212|ref|ZP_21650891.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
gi|445733768|gb|ELZ85333.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
Length = 243
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 2/184 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ ++GV++A D RASMG +SS+ V+K+ EI+P T+AG + Q NL
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISNL 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ RL+E +S+ S L+ N L S G V ++ G DE G +Y +D G
Sbjct: 109 KAEVRLYEARRGEDMSMQALSTLVGNFLRS--GAFFVVQPILGGVDEDGGHIYSIDPAGS 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
L+ GSGS YA GVL+ Y D++++EA ++A AI A RD ASG ++ V
Sbjct: 167 ILEEEYTVTGSGSQYALGVLEREYSDDLTVDEAKQVATNAIRAAVERDLASGNGINIAVV 226
Query: 235 GPNG 238
G
Sbjct: 227 TDEG 230
>gi|448472548|ref|ZP_21601172.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
gi|445819852|gb|EMA69686.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
Length = 243
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 4/196 (2%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
Q D + +K GTTT+ ++GV++A D RAS+GG +SS+ V+K+ EI+P T+AG
Sbjct: 39 QADGEGEMK--TGTTTVGIRTEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAG 96
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
+ Q L + L+E + +S+ S L N+L + G V ++ G D+
Sbjct: 97 SVSAAQNLISTLKAETSLYETRRGKDMSMEALSTLTGNLLRT--GAFFIVQPILGGVDDD 154
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
G +Y +D+ GG + GSGS YA GVL+ Y D++IEEA +A +AI A RD
Sbjct: 155 GAHIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEYHDDVTIEEAETIAAKAIQSAVERD 214
Query: 223 AASGGVASVYYVGPNG 238
ASG +V V +G
Sbjct: 215 LASGNGINVAVVTDDG 230
>gi|327311458|ref|YP_004338355.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326947937|gb|AEA13043.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 199
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 105/187 (56%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ ++GV++A D R + G YI+ + +KI +I+ ++ TM+GG AD Q L
Sbjct: 2 TTTVGIKARDGVVLATDKRVTAGYYIAHKRGEKIWKIDEHVAATMSGGVADLQGLLSTLT 61
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
I R ++ ++R I V + +L+ R + V ++ G+D+ GP LY +D G
Sbjct: 62 ILARDYKTEHRRPIPVKTLVNYASLLLFYSRPVIYIVHSIFGGFDDEGPQLYMLDWLGSY 121
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
+ S GSGSPYA GVL+ GY+ DM+++EA +LA A+ A D SG + +
Sbjct: 122 SEERYISTGSGSPYAMGVLEVGYREDMTVDEAVKLAENAVKAAMRNDPGSGEGIDIVTIT 181
Query: 236 PNGWKKL 242
+G++++
Sbjct: 182 KDGFRRV 188
>gi|10803372|emb|CAC13119.1| low molecular mass polypeptide subunit PSMB9-L [Takifugu rubripes]
Length = 217
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA F GV++ +DSRASMGG Y+SS+++ K+I+++ + MAG AD Q +
Sbjct: 16 GTTILAATFDGGVVIGSDSRASMGGEYVSSKTINKVIKVHDRIFCCMAGSLADAQAVTKA 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
H + + V A+ +L + Y + L G + AGWD GP +Y V +
Sbjct: 76 AKFHLSFHSVQMETPPLVISAASVLKELCYQNKEE-LQAGFITAGWDSRKGPQVYVV-AL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L ++G SGS Y YG +D+ YK +MS EE + A A+ A RD SGGVA++
Sbjct: 134 GGMLVRQPVTIGGSGSSYIYGYVDAKYKPNMSREECLQFATNALALAMGRDNVSGGVANL 193
Query: 232 YYVGPNGWKKL--SGDDVGELH 251
+ G + L GD + H
Sbjct: 194 VVITETGVEHLVVPGDKLPRFH 215
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 103/187 (55%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
G T + KEGV++AA+ R S G Y S + KK+ +N + AG AD Q + L
Sbjct: 8 GATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKVFIVNDRLAIASAGIIADMQTLAKIL 67
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ + +EL KR+ SV +KLL+ +++S R M ++ G D+ GP L +D G
Sbjct: 68 KLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGIDDEGPHLIVMDPLGS 127
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ ++G+G+ A ++D+ YK DMS+++A +LA +A+ A RD SGG + +
Sbjct: 128 LIEDNYAALGTGAKLAIAIIDASYKPDMSLQDAKKLAVQALKAALERDPVSGGGIDLVVI 187
Query: 235 GPNGWKK 241
NG ++
Sbjct: 188 DKNGARE 194
>gi|410931044|ref|XP_003978906.1| PREDICTED: proteasome subunit beta type-6-B like protein-like
isoform 1 [Takifugu rubripes]
Length = 217
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA F GV++ +DSRASMGG Y+SS+++ K+I+++ + MAG AD Q +
Sbjct: 16 GTTILAATFDGGVVIGSDSRASMGGEYVSSKTINKVIKVHDRIFCCMAGSLADAQAVTKA 75
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
H + + V A+ +L + Y + L G + AGWD GP +Y V +
Sbjct: 76 AKFHLSFHSVQMETPPLVISAASVLKELCYQNKEE-LQAGFITAGWDSRKGPQVYVV-AL 133
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L ++G SGS Y YG +D+ YK +MS EE + A A+ A RD SGGVA++
Sbjct: 134 GGMLVRQPVTIGGSGSTYIYGYVDAKYKPNMSREECLQFATNALALAMGRDNVSGGVANL 193
Query: 232 YYVGPNGWKKL--SGDDVGELH 251
+ G + L GD + H
Sbjct: 194 VVITETGVEHLVVPGDKLPRFH 215
>gi|290559800|gb|EFD93124.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 206
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTTL ++K+GV++AAD RA+ +++++ +K++ I+ + T AG AD Q R +
Sbjct: 7 GTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMSISSNIGVTTAGMVADLQAMVRLM 66
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYR-GMGLSVGTMIAGWDETGPGLYYVDSEG 173
+ L+E+ ++ GA LL+ +L++ R + L G I G +T P L+ +D G
Sbjct: 67 RSELTLYEIRAGSKLDTDGAVSLLSAVLFNKRLSLNLIYGEFIIGGYDTEPKLFSIDEAG 126
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G+ K GSG +A GVL+ YK +M+ EE +LA +AI + RD +G +
Sbjct: 127 GQGKDKFTVTGSGGVFALGVLEGDYKDNMTEEEGIKLAYKAISSSIRRDVYTGEGVDIAV 186
Query: 234 VGPNGWKKLSGDDVGEL 250
+ G+KKL+ +++ ++
Sbjct: 187 INKKGYKKLTDEEIQKI 203
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 103/187 (55%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
G T + K+GV++AA+ R S G Y S + KK+ I+ + AG AD Q + L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ + +EL KR+ S ++LL+ I++S R M ++ G DE GP L +D G
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGIDEEGPHLIVMDPLGS 127
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ ++G+G+ A VLD+GY+ D+++EEA +LA +A+ A RD SGG + V
Sbjct: 128 LIEDNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQALKAAIERDPVSGGGIDLAIV 187
Query: 235 GPNGWKK 241
NG ++
Sbjct: 188 DKNGARE 194
>gi|223477879|ref|YP_002582184.1| proteasome subunit beta [Thermococcus sp. AM4]
gi|214033105|gb|EEB73933.1| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 200
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ K+GV++AAD++AS+G + + +++KI+ I + T AG D Q R L
Sbjct: 7 GTTTVGIKVKDGVVLAADTQASLGNMVETLNIRKILPITDRIAITTAGSVGDVQALARML 66
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ R ++ R ++ + LL+NIL + V +I G+ + P L VD+ GG
Sbjct: 67 EAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQILIGGYVDK-PELASVDALGG 125
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
+ + GSGSP+A +++ GY+ DMSIEEA ELA RA+ A RD +G
Sbjct: 126 LVFEKYTATGSGSPFAIAIIEDGYREDMSIEEAKELAVRAVRTAGKRDVYTG 177
>gi|448445494|ref|ZP_21590392.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
gi|445685018|gb|ELZ37380.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
Length = 243
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
Q D + +K GTTT+ +GV++A D RAS+GG +SS+ V+K+ E++P T+AG
Sbjct: 39 QADGEGEMK--TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAG 96
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
+ Q L + L+E + +S+ S L N+L S G V ++ G D+
Sbjct: 97 SVSAAQHLISTLKAETSLYETRRGKDMSMEALSTLTGNLLRS--GAFYIVQPILGGVDDE 154
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
G +Y +D+ GG + GSGS YA GVL+ Y D++++EA E+A +AI A RD
Sbjct: 155 GAHIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEYHDDVTVDEATEIAAKAIQSAVERD 214
Query: 223 AASGGVASVYYVGPNG 238
ASG +V V G
Sbjct: 215 LASGNGINVAVVTDEG 230
>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 199
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 1/177 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ GTTT+ KEGV++AAD++AS+ + + ++KKI+ I + T AG D Q
Sbjct: 1 MEKKTGTTTVGIKVKEGVVLAADTQASLDHMVETLNIKKILPITDRIAITTAGSVGDVQM 60
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
R L + R ++ + ++ + LL+NIL + V +I G+ E P L +
Sbjct: 61 LARMLEAEARYYQFTWGKPMTAKAMANLLSNILNENKWFPYLVQIIIGGYVEE-PTLANL 119
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
D GG + + GSGSP+A +L+ GY+ DMSIEEA ELA RA+ A RD +G
Sbjct: 120 DPLGGLIFDDYTATGSGSPFAIAILEEGYRKDMSIEEARELAIRAVRTAGKRDVYTG 176
>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 196
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
T + +G+++A++ R S GGY+ S+ KK+ +IN +++ AG D Q R + +
Sbjct: 7 TAVGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKINKFLMAG-AGIYGDLQTLTRIMNV 65
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+ + +E++ + ISV A+KLL+ ILY Y+ M + G DE GP LY +D G +
Sbjct: 66 EIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQLYVLDPIGSLI 125
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
+ +VGSG+ A GVL+S Y +MS++ A +L +AI + RD SG
Sbjct: 126 EDNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKAIKASIERDITSG 175
>gi|448468124|ref|ZP_21599755.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
gi|445810867|gb|EMA60881.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
Length = 243
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
Q D + +K GTTT+ +GV++A D RAS+GG +SS+ V+K+ E++P T+AG
Sbjct: 39 QADGEGEMK--TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAG 96
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
+ Q L + L+E + +++ S L N+L S G V ++ G D+
Sbjct: 97 SVSAAQSLISTLKAETSLYETRRGKDMTMEALSTLTGNLLRS--GAFYIVQPILGGVDDE 154
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
G +Y +D+ GG + GSGS YA GVL+ Y D++++EA E+A +AI A RD
Sbjct: 155 GAHIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEYHDDVTVDEATEIAAKAIQSAVERD 214
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGEL 250
ASG +V V +G D G+L
Sbjct: 215 LASGNGINVAVVTEDGVDISRYKDFGDL 242
>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595721|sp|A1RTI7.1|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119674013|gb|ABL88269.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum islandicum
DSM 4184]
Length = 200
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 104/188 (55%), Gaps = 1/188 (0%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ KEGV++A D R + G YI+ + +KI +I+ ++ TM+GG AD Q L
Sbjct: 2 TTTVGIAVKEGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSLLSFLT 61
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGG 174
++ R +++ KR I + ++ IL+ R V ++I G D E G LY VD G
Sbjct: 62 LRAREYKIEYKRPIPIRALVNYVSLILFYSRPYIYLVHSIIGGVDREEGAVLYMVDWLGT 121
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ + GSGSPYA G L+ GY+ DMS+E+A +LA R++ A D SG V +
Sbjct: 122 VTRERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIRSVKAAIRNDPGSGEGIDVVVI 181
Query: 235 GPNGWKKL 242
G++++
Sbjct: 182 TKEGFRRV 189
>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 210
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Query: 45 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGA 104
D K ++ KGTTT+ + +GV++AADSRA+M +I+S +K+ +I+ + T+AG
Sbjct: 2 DQKDISRYMKGTTTVGLVCTDGVVIAADSRATMDTFIASTEARKVWKIDENLGMTIAGLV 61
Query: 105 ADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGP 164
D Q R L I+ ++++ ++++S A+ LL+ IL + M V ++ G ++
Sbjct: 62 GDAQELIRILKIQNEIYKMNERKQMSPRSAATLLSIILQENKMMPFYVQLIVGGVEDGKG 121
Query: 165 GLYYVDSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
+Y +D+ GG + +RF+ GSGS A G L+ YK ++ ++A ++A +A+ A RD+
Sbjct: 122 YVYNLDAAGGYTQESRFTATGSGSLTALGYLEDSYKPGLTTKDAIKIAAKALLIAMQRDS 181
Query: 224 ASGGVASVYYVGPNGWKKLSGDDVGEL 250
A+G ++ + G+++ + DV ++
Sbjct: 182 ATGNNMTIAAITSRGYEEYTQKDVEKM 208
>gi|448503545|ref|ZP_21613174.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
gi|445691746|gb|ELZ43929.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
Length = 243
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ ++GV++A D RAS+GG +SS+ V+K+ EI+P T+AG + Q L
Sbjct: 49 GTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L+E + +S+ S L N+L S G V ++ G D+ G +Y +D+ GG
Sbjct: 109 RAETSLYEARRSKDMSMEALSTLTGNLLRS--GAFFVVQPILGGVDDEGAHIYSIDALGG 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ GSGS YA GVL+ Y ++SI+EA +A +AI A RD ASG +V V
Sbjct: 167 TTEEEYTVTGSGSQYALGVLEQEYDDEVSIDEAKTIAAKAIQSAVERDLASGNGINVAVV 226
Query: 235 GPNG 238
+G
Sbjct: 227 TDDG 230
>gi|448428541|ref|ZP_21584273.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|448450269|ref|ZP_21592168.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|448481610|ref|ZP_21604961.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
gi|448507503|ref|ZP_21615014.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|448523281|ref|ZP_21618634.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|155212701|gb|ABT17422.1| proteasome beta subunit [Halorubrum sp. TP009]
gi|445676010|gb|ELZ28535.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|445698458|gb|ELZ50502.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|445701680|gb|ELZ53656.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|445812121|gb|EMA62117.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|445821863|gb|EMA71647.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
Length = 243
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ +GV++A D RAS+GG +SS+ V+K+ EI+P T+AG + Q L
Sbjct: 49 GTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L+E + +S+ S L N+L S G V ++ G D+ G +Y +D+ GG
Sbjct: 109 RAETSLYEARRGKDMSMEALSTLTGNLLRS--GAFFVVQPILGGVDDEGAHIYSIDALGG 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ GSGS YA GVL+ Y D++I+EA +A +AI A RD ASG +V V
Sbjct: 167 TTEEEYTVTGSGSQYALGVLEQEYDDDVTIDEAKTIAAKAIQSAVERDLASGNGINVAVV 226
Query: 235 GPNGWK 240
+G +
Sbjct: 227 TDDGVE 232
>gi|15920692|ref|NP_376361.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574726|sp|Q975D1.1|PSB2_SULTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|15621475|dbj|BAB65470.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 207
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 110/198 (55%), Gaps = 2/198 (1%)
Query: 45 DTKATLKHAK-GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGG 103
+T LK K GTTT+ K+GV++AAD RAS G Y++ + V+K++ + P + T AG
Sbjct: 2 ETNNKLKILKTGTTTVGIKVKDGVVLAADRRASAGMYVAHKYVRKVLYVAPNIGITTAGS 61
Query: 104 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 163
AD QF + L + + R I++ + LAN+L + + V +I G DE
Sbjct: 62 VADLQFIYDLLKNIYHYNLITGMRPITIKALATYLANMLSFSKYLPYIVQILIGGVDEQ- 120
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
P LY +D G + + GSGS A GV++ Y+ DM+++EAA+LARRAI+ + RD
Sbjct: 121 PRLYNLDYVGDITEEDYTATGSGSVEAIGVIEDEYRPDMTLDEAADLARRAIFSSIKRDP 180
Query: 224 ASGGVASVYYVGPNGWKK 241
+G V + NG ++
Sbjct: 181 YTGTGVIVSKITKNGHEE 198
>gi|389847077|ref|YP_006349316.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|448614975|ref|ZP_21664003.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|388244383|gb|AFK19329.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|445753062|gb|EMA04481.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
Length = 245
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 2/198 (1%)
Query: 41 EFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTM 100
E + D+ + GTTT+ EGV++A D RAS+G +SS+ V+K+ EI+P T+
Sbjct: 35 ERRADSLGDKETKTGTTTVGIKTDEGVVLATDMRASLGHMVSSKDVQKVEEIHPRGALTI 94
Query: 101 AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
AG + Q +L + RL+E +S+ S L+ N L S G V ++ G D
Sbjct: 95 AGSVSAAQSLISSLRAEVRLYESRRGEDMSMQALSTLVGNFLRS--GGFYIVQPILGGVD 152
Query: 161 ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATF 220
+ G +Y +D G L+ GSGS YA GVL+ + D+SI+EA E+A +AI A
Sbjct: 153 DEGAHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFSEDLSIDEAREVATKAIRSAVE 212
Query: 221 RDAASGGVASVYYVGPNG 238
RD ASG ++ V +G
Sbjct: 213 RDLASGNGINIAVVTEDG 230
>gi|307596440|ref|YP_003902757.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307551641|gb|ADN51706.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 216
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 3/194 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSV-KKIIEINPYMLGTMAGGAADCQFWHRN 113
GTTT+ + +GV++A D R + G YI+ + KI +I+ ++ TM+GG AD Q
Sbjct: 15 GTTTVGIVVNDGVVLATDRRVTAGYYIAHRKKGVKIWKIDNHVAATMSGGVADLQKVLDA 74
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
L +++ + IS+ + + I++S R V + GWD + GP +Y +D
Sbjct: 75 LTATAIQYKIETGKPISIRALANYASLIVFSSRPFIYLVHMIFGGWDPDEGPVIYMLDFF 134
Query: 173 GGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
G + T F + GSGSP A+GVL+ GY+ DMSIE+A LA RA+ A + D SG V
Sbjct: 135 GTLTRETEFMATGSGSPTAFGVLEDGYRRDMSIEDAIRLAVRAVRSAIYHDPGSGEGIDV 194
Query: 232 YYVGPNGWKKLSGD 245
+ G+K+++ +
Sbjct: 195 VTITKEGYKEVNSE 208
>gi|410932678|ref|XP_003979720.1| PREDICTED: proteasome subunit beta type-8-like [Takifugu rubripes]
Length = 133
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 63/88 (71%)
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GPGLYYVD G R G FS GSG+ YAY V+DSG + DM++EEA +L RR I +AT RD
Sbjct: 37 GPGLYYVDGNGNRFSGQMFSTGSGNSYAYAVVDSGLREDMTVEEAYDLGRRGIVYATHRD 96
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGEL 250
A SGGV ++Y++ +GW K+ DDV +L
Sbjct: 97 AYSGGVVNMYHMMEDGWIKVCQDDVSQL 124
>gi|145590322|ref|YP_001152324.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595706|sp|A4WH05.1|PSB1_PYRAR RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145282090|gb|ABP49672.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum arsenaticum
DSM 13514]
Length = 202
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ + K+GV++A D R + G YI+ + +K+ +I+ ++ TM+GG AD Q L
Sbjct: 2 TTTVGIVVKDGVVLATDKRVTAGYYIAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLT 61
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGG 174
++ R ++ +R I + ++ IL+ R V ++I G D E G +Y VD G
Sbjct: 62 VRAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMVDWLGT 121
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVYY 233
K + GSGSPYA GVL+ GY+ D+++EEA +LA AI A D SG G+ V
Sbjct: 122 VTKEKYVATGSGSPYAKGVLEVGYRGDLTVEEAVDLAINAIKAAIRNDPGSGEGIDVVTI 181
Query: 234 VGPNGWKKL 242
+G+K++
Sbjct: 182 TKRDGFKRI 190
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 1/201 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+ KGTTT+ + K+GV++AAD RAS+G + S+ V KI +I+ ++ AG D
Sbjct: 1 MDKIKGTTTVGIVCKDGVVLAADMRASLGNMVLSKGVSKIFQIDDHLALAGAGSVGDILS 60
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
R L + +L+ R +S + L +NIL R ++AG+DE PGLY +
Sbjct: 61 LVRLLRAEAKLYRARVGREMSTKALATLTSNILSGRRYFPYFGWFLVAGYDEK-PGLYSI 119
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
D GG + S GSG +AY VLD+ Y M++++ +LA +AI A RD +G
Sbjct: 120 DMAGGITEDKYVSAGSGMEFAYSVLDNEYDEKMNVKKGVKLAIKAINTAIKRDVFTGDGI 179
Query: 230 SVYYVGPNGWKKLSGDDVGEL 250
V + G+ +LS ++V ++
Sbjct: 180 MVVVITKEGYSELSKEEVEKI 200
>gi|329764912|ref|ZP_08256501.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795409|ref|ZP_10378773.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
gi|329138581|gb|EGG42828.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 195
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 102/190 (53%), Gaps = 1/190 (0%)
Query: 52 HAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWH 111
+ G T + F++G+++A++ R + G ++ S++ KK I P + T AG AD Q
Sbjct: 2 YMPGATAVGITFQDGIVLASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILT 61
Query: 112 RNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDS 171
+ ++ ++ KR + +K+++N++Y R L ++ G + P L+ +D
Sbjct: 62 LQIAALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGIIDK-PILFTLDP 120
Query: 172 EGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
G L +VG+G+ A GVLD +K +M+ EEA +LA+RA+ A RD+ASG V
Sbjct: 121 LGSVLPDEYAAVGTGAEMALGVLDPQFKPNMTQEEAIDLAKRAVRSAALRDSASGDGLDV 180
Query: 232 YYVGPNGWKK 241
+ +G K+
Sbjct: 181 LVITKDGIKE 190
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + +GV++AAD RAS+G + +++V KI +I+ ++ AG D R
Sbjct: 9 KGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRL 68
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L + +L+ + +R+SV + LLAN+L R + ++ G+DE P LY VD G
Sbjct: 69 LRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEK-PRLYSVDMMG 127
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G + + GSG +AY VLDS Y+ D+ + E ++A AI A RD SG V
Sbjct: 128 GITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVT 187
Query: 234 VGPNGWKKLS 243
+ G+++LS
Sbjct: 188 ITEEGYRELS 197
>gi|405962686|gb|EKC28337.1| Proteasome subunit beta type-7 [Crassostrea gigas]
Length = 275
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 119/250 (47%), Gaps = 16/250 (6%)
Query: 30 SFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI 89
SF F E QK KA + GTT + ++K+GV++ AD+RA+ ++ ++ KI
Sbjct: 15 SFENCCRNQFFE-QKGIKAPTAYKTGTTIVGLVYKDGVVLGADTRATEDTVVADKNCSKI 73
Query: 90 --IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
I N Y G AG AAD + + + + LH L R V A++LL +L+ Y+G
Sbjct: 74 HYISDNIYCCG--AGTAADTEMTTQMISSQLELHRLNTGRTPRVCTANRLLKQMLFRYQG 131
Query: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 207
+S ++ G D TGP LY V G K ++GSGS A V + G+K +M EEA
Sbjct: 132 H-ISAALVLGGVDSTGPHLYSVYPHGSTDKLPYVTMGSGSLAAMAVFERGFKPNMEKEEA 190
Query: 208 AELARRAIYHATFRDAASGGVASVY--------YVGPNGWKKLSGDDVGELHYHYYPVTP 259
+L R AI F D SG V Y+ P L G G Y Y T
Sbjct: 191 KKLVRDAIAAGIFNDLGSGSNVDVCVITKDKVDYIRPFDEANLKGQRQGS--YRYKKGTT 248
Query: 260 STVEQEMAEV 269
+ ++ E+ ++
Sbjct: 249 AVLKTEVKKI 258
>gi|379005397|ref|YP_005261069.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
gi|375160850|gb|AFA40462.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
Length = 202
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ + K+GV++A D R + G YI+ + +K+ +I+ ++ TM+GG AD Q L
Sbjct: 2 TTTVGIVVKDGVVLATDKRVTAGYYIAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLT 61
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGG 174
++ R ++ +R I + ++ IL+ R V ++I G D E G +Y VD G
Sbjct: 62 VRAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMVDWLGT 121
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVYY 233
K + GSGSPYA GVL+ GY+ D+++EEA +LA AI A D SG G+ V
Sbjct: 122 VTKEKYVATGSGSPYAKGVLEVGYRGDLTVEEAVDLAINAIKAAIRNDPGSGEGIDVVTI 181
Query: 234 VGPNGWKKL 242
G+K++
Sbjct: 182 TKREGFKRI 190
>gi|448456459|ref|ZP_21595228.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
gi|445811935|gb|EMA61932.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
Length = 243
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 4/196 (2%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
Q D + +K GTTT+ +GV++A D RAS+GG +SS+ V+K+ E++P T+AG
Sbjct: 39 QADGEGEMK--TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAG 96
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
+ Q L + L+E + +S+ S L N+L S G V ++ G D+
Sbjct: 97 SVSAAQNLISTLKAETSLYETRRGKDMSMEALSTLTGNLLRS--GAFYIVQPILGGVDDE 154
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
G +Y +D+ GG + GSGS YA GVL+ Y +++++EA E+A +AI A RD
Sbjct: 155 GAHIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEYHDEVTVDEATEIAAKAIQSAVERD 214
Query: 223 AASGGVASVYYVGPNG 238
ASG +V V +G
Sbjct: 215 LASGNGINVAVVTDDG 230
>gi|375082621|ref|ZP_09729674.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
gi|374742699|gb|EHR79084.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
Length = 199
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 1/177 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ GTTT+ K+GV++AAD++AS+ + + ++KKI+ I + T AG D Q
Sbjct: 1 MEKKTGTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPITDKIAITTAGSVGDLQA 60
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
R L + R ++ + ++ + LL+NIL + V +I G+ E P L +
Sbjct: 61 LARMLEAEARYYQFTWGKPMTAKAMANLLSNILNESKWFPYMVQIIIGGYVEE-PTLASL 119
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
D GG + + GSGSP+A +L+ GYK DM+IEEA ELA RA+ A RD +G
Sbjct: 120 DPLGGLIFDNYTATGSGSPFAIAILEDGYKEDMTIEEARELAIRAVRTAGKRDVYTG 176
>gi|385773318|ref|YP_005645884.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
HVE10/4]
gi|385775950|ref|YP_005648518.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323474698|gb|ADX85304.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477432|gb|ADX82670.1| proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 211
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
+E Q + K KGTTT+ +GV++AAD RAS G +++++ V+K++ I + T
Sbjct: 6 NELQLENKIL----KGTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGIT 61
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
AG AD QF + L + + IS+ G + LAN+L + + V +I G+
Sbjct: 62 TAGSVADLQFIYNVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGY 121
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ P L+ +D G + + GSGSP A GVL+ Y M+++EAA+LA+RA++ A
Sbjct: 122 DDQ-PRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAI 180
Query: 220 FRDAASGGVASVYYVGPNGWKKL 242
RD+ +G V + G ++L
Sbjct: 181 KRDSFTGTGVIVAKIHSKGHEEL 203
>gi|448488453|ref|ZP_21607289.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
gi|445696143|gb|ELZ48236.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
Length = 243
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ +GV++A D RAS+GG +SS+ V+K+ EI+P T+AG + Q L
Sbjct: 49 GTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L+E + +S+ S L N+L S G V ++ G D+ G +Y +D+ GG
Sbjct: 109 RAETSLYEARRGKDMSMEALSTLTGNLLRS--GAFYIVQPILGGVDDEGAHIYSIDALGG 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ GSGS YA GVL+ Y D++I+EA +A +AI A RD ASG +V V
Sbjct: 167 TTEEEYTVTGSGSQYALGVLEQEYDDDVTIDEAKNIAAKAIQSAVERDLASGNGINVAVV 226
Query: 235 GPNG 238
+G
Sbjct: 227 TDDG 230
>gi|15897668|ref|NP_342273.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174993|ref|ZP_06388962.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384434282|ref|YP_005643640.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|6015710|emb|CAB57537.1| proteasome, beta subunit [Sulfolobus solfataricus P2]
gi|13813939|gb|AAK41063.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261602436|gb|ACX92039.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 225
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
+E Q + K KGTTT+ +GV++AAD RAS G +++++ V+K++ I + T
Sbjct: 20 NELQLENKIL----KGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGIT 75
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
AG AD QF + L + + IS+ G + LAN+L + + V +I G+
Sbjct: 76 TAGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGY 135
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ P L+ +D G + + GSGSP A GVL+ Y M+++EAA+LA+RA++ A
Sbjct: 136 DDQ-PRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAI 194
Query: 220 FRDAASGGVASVYYVGPNGWKKL 242
RD+ +G V + G ++L
Sbjct: 195 KRDSFTGTGVIVAKIHSKGHEEL 217
>gi|302595900|sp|D0KTH0.2|PSB2_SULS9 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 211
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
+E Q + K KGTTT+ +GV++AAD RAS G +++++ V+K++ I + T
Sbjct: 6 NELQLENKIL----KGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGIT 61
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
AG AD QF + L + + IS+ G + LAN+L + + V +I G+
Sbjct: 62 TAGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGY 121
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ P L+ +D G + + GSGSP A GVL+ Y M+++EAA+LA+RA++ A
Sbjct: 122 DDQ-PRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAI 180
Query: 220 FRDAASGGVASVYYVGPNGWKKL 242
RD+ +G V + G ++L
Sbjct: 181 KRDSFTGTGVIVAKIHSKGHEEL 203
>gi|229582084|ref|YP_002840483.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|302595759|sp|C3NHF1.1|PSB2_SULIN RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|228012800|gb|ACP48561.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
Length = 211
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 107/192 (55%), Gaps = 1/192 (0%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
K KGTTT+ +GV++AAD RAS G +++++ V+K++ I + T AG AD QF
Sbjct: 13 KILKGTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFI 72
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
+ L + + IS+ G + LAN+L + + V +I G+D+ P L+ +D
Sbjct: 73 YDVLKNIYHYNNITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQ-PRLFNLD 131
Query: 171 SEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVAS 230
G + + GSGSP A GVL+ Y M+++EAA+LA+RA++ A RD+ +G
Sbjct: 132 YLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVI 191
Query: 231 VYYVGPNGWKKL 242
V + G ++L
Sbjct: 192 VAKIHSKGHEEL 203
>gi|227827648|ref|YP_002829428.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830344|ref|YP_002832124.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579161|ref|YP_002837559.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229584852|ref|YP_002843354.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238619816|ref|YP_002914642.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284997769|ref|YP_003419536.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|302595712|sp|D2PK63.1|PSB1_SULID RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595725|sp|C4KHB0.1|PSB1_SULIK RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595727|sp|C3MQ16.1|PSB1_SULIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595742|sp|C3MVD5.1|PSB1_SULIM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595747|sp|C3N5N4.1|PSB1_SULIA RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595752|sp|C3NE98.1|PSB1_SULIY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|227456792|gb|ACP35479.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459444|gb|ACP38130.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228009875|gb|ACP45637.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228019902|gb|ACP55309.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238380886|gb|ACR41974.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284445664|gb|ADB87166.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
Length = 211
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
+E Q + K KGTTT+ +GV++AAD RAS G +++++ V+K++ I + T
Sbjct: 6 NELQLENKIL----KGTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGIT 61
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
AG AD QF + L + + IS+ G + LAN+L + + V +I G+
Sbjct: 62 TAGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGY 121
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ P L+ +D G + + GSGSP A GVL+ Y M+++EAA+LA+RA++ A
Sbjct: 122 DDQ-PRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAI 180
Query: 220 FRDAASGGVASVYYVGPNGWKKL 242
RD+ +G V + G ++L
Sbjct: 181 KRDSFTGTGVIVAKIHSKGHEEL 203
>gi|222479043|ref|YP_002565280.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
gi|302595813|sp|B9LTS6.1|PSB_HALLT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|222451945|gb|ACM56210.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
Length = 243
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
Q D + +K GTTT+ +GV++A D RAS+GG +SS+ V+K+ E++P T+AG
Sbjct: 39 QADGEGEMK--TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAG 96
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
+ Q L + L+E + +S+ S L N+L S G V ++ G D+
Sbjct: 97 SVSAAQNLISTLKAETSLYETRRGKDMSMEALSTLTGNLLRS--GAFYIVQPILGGVDDE 154
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
G +Y +D+ GG + GSGS YA GVL+ Y D++++EA +A +AI A RD
Sbjct: 155 GSHIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVERD 214
Query: 223 AASGGVASVYYVGPNG 238
ASG +V V +G
Sbjct: 215 LASGNGINVAVVTDDG 230
>gi|9910839|sp|Q9UXF3.2|PSB2_SULSO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 208
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 5/203 (2%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
+E Q + K KGTTT+ +GV++AAD RAS G +++++ V+K++ I + T
Sbjct: 3 NELQLENKIL----KGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGIT 58
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
AG AD QF + L + + IS+ G + LAN+L + + V +I G+
Sbjct: 59 TAGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGY 118
Query: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHAT 219
D+ P L+ +D G + + GSGSP A GVL+ Y M+++EAA+LA+RA++ A
Sbjct: 119 DDQ-PRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAI 177
Query: 220 FRDAASGGVASVYYVGPNGWKKL 242
RD+ +G V + G ++L
Sbjct: 178 KRDSFTGTGVIVAKIHSKGHEEL 200
>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 202
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 95/170 (55%)
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
T + +EGV++A++ R + G++ S SVKK+ I P++ AG D R L +
Sbjct: 7 TAIGVKTREGVVLASEKRLTYDGFVLSSSVKKVYAITPHVGVGFAGLMGDVNILKRMLEM 66
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+ + +EL + R I V G +K+L+ ILYSY+ + ++ G+D+ GP LY +D G +
Sbjct: 67 EAKYYELQHGREIRVRGLAKMLSVILYSYKLAPMLTEIVVGGYDDNGPQLYILDPVGSLI 126
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
+ ++GSG+ A G ++ Y D+S+EEA +L A+ RD SG
Sbjct: 127 EEKYAALGSGAQLALGYIEPRYNPDISLEEAEKLVVEAVKTVIERDVLSG 176
>gi|57642142|ref|YP_184620.1| proteasome subunit beta 2 [Thermococcus kodakarensis KOD1]
gi|74505318|sp|Q5JHL8.1|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
Length = 199
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 104/193 (53%), Gaps = 2/193 (1%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ GTTT+ KEGV++AAD++AS+ + + +++KI+ I + T AG D Q
Sbjct: 1 MEKKTGTTTVGIRTKEGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQA 60
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
R L + R ++ R ++ + LL+NIL + V +I G+ E P L +
Sbjct: 61 LARMLEAEARYYQFTWGRPMTAKAMAHLLSNILNENKWFPYMVQIIIGGYVEE-PTLANL 119
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGG-V 228
D GG + + GSGSP+A VL+ G++ DMS+EEA ELA RA+ A RD +G
Sbjct: 120 DPLGGLIFDDYTATGSGSPFAIAVLEDGFRKDMSLEEAKELAVRAVRTAGKRDVYTGDRK 179
Query: 229 ASVYYVGPNGWKK 241
V + +G K+
Sbjct: 180 VQVVVISKDGMKE 192
>gi|268554105|ref|XP_002635040.1| C. briggsae CBR-PBS-1 protein [Caenorhabditis briggsae]
Length = 242
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
+ GTT +A + GV+V DSR S G +I+S++ KI I M+ +G AAD Q
Sbjct: 24 STGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIAD 83
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
++ + + +++ +S++ LY+YR LS ++AGWD G Y
Sbjct: 84 IAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQ-LSASVLVAGWDSELGGQVYAIPI 142
Query: 173 GGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG + R + GSGS + G LDS ++ D+++EE + ++A+ ATFRD +SGGV +
Sbjct: 143 GGFVSRQRSTASGSGSTFVQGFLDSQWRPDLTLEECKAIVKQAVGLATFRDGSSGGVVRL 202
Query: 232 YYVGPNGWK 240
+ G K
Sbjct: 203 AVIDKTGSK 211
>gi|384483124|gb|EIE75304.1| proteasome subunit beta type-7 [Rhizopus delemar RA 99-880]
Length = 269
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
Query: 44 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGG 103
K KAT + GTT + I+K+G+ + AD+RA+ G ++ ++ +KI I P + AG
Sbjct: 29 KPPKAT---STGTTIVGLIYKDGICLGADTRATEGPIVADKNCEKIHYIAPNIYCCGAGT 85
Query: 104 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 163
AAD +F + + LH LA R+ V A LL +LY Y+G + ++ G+D TG
Sbjct: 86 AADTEFTTNLISSQIELHSLATGRKPRVATAMTLLKQMLYKYQGH-IGAALVLGGFDVTG 144
Query: 164 PGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDA 223
P LY V G ++GSGS A V +S +K +M+ EEA +L R AI F D
Sbjct: 145 PQLYTVYPHGSTDNLPYVTMGSGSLAAMSVFESKWKPNMNREEAIDLVREAIEAGIFNDL 204
Query: 224 ASGGVASVYYV 234
SG V +
Sbjct: 205 GSGSNVDVCVI 215
>gi|302595920|sp|A0RXV1.2|PSB2_CENSY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 210
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 101/189 (53%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ +GV++ AD RAS G +I++ + KI I+ + T+AGG AD Q L
Sbjct: 12 GTTTVGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQNIVDVL 71
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
LH + + I + ++L + I + RG ++ G+D GP LY +D G
Sbjct: 72 RYHASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMGGFDAVGPALYNIDMFGS 131
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ + + GSGSP AYG L+ Y+ D++ +EA +A RA+ A R+ +G +V +
Sbjct: 132 VEEKSYVTTGSGSPVAYGTLEEEYRADLTADEAKGVALRAVKAAITRNIGTGDGINVAVI 191
Query: 235 GPNGWKKLS 243
NG++ L+
Sbjct: 192 NGNGFELLT 200
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 97/173 (56%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
G T + K+GV++AA+ R S G Y S + KK+ +N + AG AD Q + L
Sbjct: 8 GATAVGIRAKDGVVLAAEKRVSYGFYTLSTAGKKVFIVNDKLAIASAGIIADMQALAKIL 67
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ R +EL K++ +V +KLL+ +++S R M ++ G DE GP L +D G
Sbjct: 68 KLNARSYELEVKKKPTVKAMAKLLSVVMFSRRFMPFYAEVLVGGVDEEGPHLIVMDPLGS 127
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGG 227
++ ++G+G+ A +LD+ Y+ DM++EEA +LA +A+ A RD SGG
Sbjct: 128 LIEDNYAALGTGAKLAVSLLDASYRPDMTVEEAKKLAVQAVKAAIERDPVSGG 180
>gi|118346415|ref|XP_976941.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89288453|gb|EAR86441.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 227
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 112/207 (54%), Gaps = 5/207 (2%)
Query: 51 KHAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 108
KHA+ GT+ +A ++ GV+V ADSR + G YI+ ++ K+ ++ + +G AAD Q
Sbjct: 19 KHAESTGTSIMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHERIYCLRSGSAADTQ 78
Query: 109 FWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLY 167
+ +H + +RR +V A+KL +N++Y Y+ LS ++AG D+ GP +Y
Sbjct: 79 TLCSYVRYYLDVHSMELQRRPTVKTAAKLFSNLIYQYQD-NLSAAVIVAGIDDNEGPSIY 137
Query: 168 YVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGG 227
G +K GSGS + + +D+ ++ +M +E A +L + A+ HA RD +SGG
Sbjct: 138 ACQPSGSCIKQQVAIGGSGSGFIFSYVDANFRPNMDLESAKKLVKTALAHAMSRDGSSGG 197
Query: 228 VASVYYVGPNGWKKLSGDDVGELHYHY 254
+ + + + + D +L YH+
Sbjct: 198 IIRLVNITKDNVTREFFDH-KDLPYHF 223
>gi|18312192|ref|NP_558859.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74565305|sp|Q8ZYF2.1|PSB1_PYRAE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18159629|gb|AAL63041.1| proteasome beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 202
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ K+GV++A D R + G YI+ + +KI +I+ ++ TM+GG AD Q L
Sbjct: 2 TTTVGIAVKDGVVLATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLT 61
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGG 174
++ +++ KR I ++ ++ IL+ R V ++I G D E G LY VD G
Sbjct: 62 LRAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWLGT 121
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVYY 233
K + GSGSPYA G L+ GY+ DM++E+A +LA +A+ A D SG G+ V
Sbjct: 122 VTKEKYIATGSGSPYAKGALEVGYREDMTLEDAVDLAIKAVKAAIRNDPGSGEGIDVVVI 181
Query: 234 VGPNGWKKL 242
G+K++
Sbjct: 182 TRKEGFKRV 190
>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 196
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
T + +G+++A++ R S GGY+ S+ KK+ +I +++ AG D Q R + +
Sbjct: 7 TAIGLKVNDGIVLASERRLSYGGYVLSKQAKKVHKIGKFLMAG-AGIYGDLQTLTRIMNV 65
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+ + +E++ + ISV A+KLL+ ILY Y+ M + G DE GP LY +D G +
Sbjct: 66 EIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQLYVLDPIGSLI 125
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
+ +VGSG+ A GVL+S Y +M+++ AA+L +AI + RD SG
Sbjct: 126 EDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKASIERDITSG 175
>gi|337285369|ref|YP_004624843.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334901303|gb|AEH25571.1| proteasome, subunit beta [Pyrococcus yayanosii CH1]
Length = 197
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ GTTT+ EGV++AAD++AS+ + + +++KII I + T AG D Q
Sbjct: 1 MEKKTGTTTVGIRVDEGVVLAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQM 60
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
R L ++ R ++ R +S + LL+NIL + V +I G+ E P + +
Sbjct: 61 LARILEVEARYYQFTWGRPMSTRAMANLLSNILNENKWFPYLVQIVIGGYVEE-PVIANL 119
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
D GG + + GSGSP+A VL+ GY+ DM IEEA ELA +A+ A RD +G
Sbjct: 120 DPLGGLIFDDYTATGSGSPFAIAVLEDGYRKDMGIEEAKELAVKAVKVAGKRDVYTG 176
>gi|359415410|ref|ZP_09207873.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
gi|358034267|gb|EHK02709.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
Length = 215
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 2/198 (1%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
QK+ K + GTTT+ ++GV++AAD RASMG +S+ +KI ++ + T+AG
Sbjct: 6 QKNDKKVEEFQTGTTTVGLTTEDGVVLAADRRASMGHLTASKYAQKIYRLDENLGLTIAG 65
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
D Q R + + +LH+L K +SV GA LL+NIL+S + M ++ G ++
Sbjct: 66 SVGDAQRIVRMMRSQLKLHKLETK-ELSVRGAGTLLSNILHSSKMMPYMNQFILGGLEDG 124
Query: 163 GPGLYYVDSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFR 221
L+ +D GG ++ F+ GSGS AYGVL+ Y+ DM E ELA++AI A R
Sbjct: 125 NGKLFDLDPAGGLMEHNYFTATGSGSQMAYGVLEDHYEEDMGHSEGLELAKKAIKSAMER 184
Query: 222 DAASGGVASVYYVGPNGW 239
D ASG V + +G+
Sbjct: 185 DTASGNGIMVVEITEDGY 202
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 99/182 (54%)
Query: 57 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 116
TT+ +GV++AA+ R S G Y+ S+S KK+ I M AG AD Q R +
Sbjct: 7 TTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVEA 66
Query: 117 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 176
+ RL+EL + V +KLL+ ILY R ++ G DE G LY +D G +
Sbjct: 67 EMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSHLYSLDPIGAII 126
Query: 177 KGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGP 236
+ ++GSG+ A +++S YK DMS++EA LA +++Y A RDAASG V +G
Sbjct: 127 EDDYVALGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDAASGDGVDVLVIGK 186
Query: 237 NG 238
+G
Sbjct: 187 SG 188
>gi|17541700|ref|NP_500125.1| Protein PBS-1 [Caenorhabditis elegans]
gi|351064427|emb|CCD72799.1| Protein PBS-1 [Caenorhabditis elegans]
Length = 239
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 2/187 (1%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
+ GTT +A + GV+V DSR S G +I+S++ KI I M+ +G AAD Q
Sbjct: 21 STGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIAD 80
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
++ + + +++ +S++ LY+YR LS ++AGWDE G Y
Sbjct: 81 IAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQ-LSASVLVAGWDEELGGQVYAIPI 139
Query: 173 GGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG + R + GSGS + G LDS ++ ++++EE + ++A+ ATFRD +SGGV +
Sbjct: 140 GGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATFRDGSSGGVVRL 199
Query: 232 YYVGPNG 238
+ G
Sbjct: 200 AVINKAG 206
>gi|171184537|ref|YP_001793456.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595728|sp|B1YA36.1|PSB1_THENV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170933749|gb|ACB39010.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 201
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ +EGV++A D R + G YI+ + +KI +I+ ++ TM+GG AD Q L
Sbjct: 2 TTTVGIAVREGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSVLSFLT 61
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEGG 174
++ R +++ KR I + ++ IL+ R V ++I G DE G LY D G
Sbjct: 62 LRAREYKMEYKRPIPIRALVNYVSLILFYSRPYIYIVHSIIGGVDDEEGAVLYMADWLGT 121
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG-GVASVYY 233
K + GSGSPYA G L+ GY+ DMS+E+A +LA +A+ A D SG G+ V
Sbjct: 122 VTKERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIKAVKAAIRNDPGSGEGIDVVVI 181
Query: 234 VGPNGWKKL 242
G++++
Sbjct: 182 TKREGFRRV 190
>gi|352683092|ref|YP_004893616.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275891|emb|CCC82538.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 199
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 102/187 (54%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
TTT+ ++GV++AAD R + G YI+ + +KI +I+ ++ TM+GG AD Q L
Sbjct: 2 TTTVGIKARDGVVLAADKRVTAGYYIAHKRGEKIWKIDEHVAATMSGGVADLQGLLNILS 61
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
I+ R + + R I + + +L+ R V ++I G+D+ GP LY +D G
Sbjct: 62 IQAREYRSEHGRPIPIKTLVNYASLVLFYSRPFIYLVHSIIGGYDDEGPQLYMLDWLGSY 121
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
+ GSGSPYA GVL+ Y+ D+SI+EA ++A A+ A D SG + +
Sbjct: 122 SSERYIATGSGSPYAMGVLEVNYRDDISIDEAIKVAENAVKAAMRNDPGSGEGIDIVVIT 181
Query: 236 PNGWKKL 242
G++++
Sbjct: 182 KEGFRRV 188
>gi|326428157|gb|EGD73727.1| proteasome subunit beta type-7 [Salpingoeca sp. ATCC 50818]
Length = 272
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTT IFK+GV++ AD+RA+ G ++ ++ KI + P M AG AAD + +
Sbjct: 31 GTTIAGIIFKDGVVLGADTRATEGTIVADKNCAKIHYMAPNMYCCGAGTAADTEMVTNLV 90
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ LH L R+ V A +LL LY Y+G +S ++ G D +GP LY + G
Sbjct: 91 SSQLELHRLETGRQSRVITALRLLKQRLYRYQGH-ISAALVLGGVDVSGPVLYSIYPHGS 149
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K ++GSGS A GV ++ YK DM ++EA +L R AI F D SG + +
Sbjct: 150 TDKLPFVTMGSGSLAAMGVFEARYKKDMELDEAKQLVRDAIAAGIFNDLGSGSNVDLCVI 209
Query: 235 GPNG 238
+G
Sbjct: 210 TKDG 213
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 196
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 98/178 (55%), Gaps = 3/178 (1%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ GTTT+ K+GV++AAD++AS+ + + ++KKII I + T AG D Q
Sbjct: 1 MEKKTGTTTVGIKVKDGVVLAADTQASLDHMVETLNIKKIIPITDRIAITTAGSVGDVQM 60
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYY 168
R L + R + R ++ + LL+NIL R V +I G+ DE P +
Sbjct: 61 LARYLEAEARYYYFTWGRPMTTKAMANLLSNILNENRWFPYLVQIIIGGYVDE--PTIAN 118
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
+D GG + + GSG+P+A VL+ GY+ D++IEEA ELA RA+ A RD +G
Sbjct: 119 LDPFGGLIFDDYTATGSGTPFAIAVLEEGYREDLTIEEAKELAIRAVRAAGRRDVYTG 176
>gi|308463733|ref|XP_003094138.1| CRE-PBS-1 protein [Caenorhabditis remanei]
gi|308248129|gb|EFO92081.1| CRE-PBS-1 protein [Caenorhabditis remanei]
Length = 239
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
+ GTT +A + GV+V DSR S G +I+S++ KI I M+ +G AAD Q
Sbjct: 21 STGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITENMVVCRSGSAADTQAIAD 80
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
++ + + +++ +S++ LY+YR LS ++AGWD G Y
Sbjct: 81 IAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQ-LSASVLVAGWDSELGGQVYAIPI 139
Query: 173 GGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG + R + GSGS + G LDS ++ D++++E + ++A+ ATFRD +SGGV +
Sbjct: 140 GGFVSRQRSTASGSGSTFVQGFLDSQWRPDLTLDECKAIVKQAVGLATFRDGSSGGVVRL 199
Query: 232 YYVGPNGWK 240
+ G K
Sbjct: 200 AVIDKTGSK 208
>gi|55742410|ref|NP_001007179.1| proteasome subunit beta type-11 [Danio rerio]
gi|169146057|emb|CAQ14650.1| novel protein similar to proteasomes [Danio rerio]
Length = 375
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 8/152 (5%)
Query: 9 ESTSPFFGSGDELCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVM 68
ES+ F + C + +A+ FS LS F L H GTTTL FIF++GV+
Sbjct: 39 ESSFNFHLPAQQSCRKNTASTLFSSTLSPHEQPFH------LSH--GTTTLGFIFQDGVI 90
Query: 69 VAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRR 128
AAD+RAS G + KI+ I+ +++ +G ADC W R L + RL++L ++ R
Sbjct: 91 AAADTRASCKGLVCCPITHKIMPIHSHLVVNTSGSGADCMLWERILTREMRLYQLRHRTR 150
Query: 129 ISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
+S+ GA+KLL+ +L+ ++G + V + GWD
Sbjct: 151 LSINGAAKLLSTMLHPFKGTNVCVAATLCGWD 182
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%)
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GP + YV S+G +L G SVGSGSPYAY VLD G+++ M+++EA LAR A++ AT D
Sbjct: 250 GPRVCYVCSDGLQLNGEIISVGSGSPYAYAVLDDGWRWGMTVDEAVGLAREAVFRATHWD 309
Query: 223 AASGGVASVYYVGPNGWKKLSGDDV 247
A SG ++Y+ GW++ +D+
Sbjct: 310 AYSGNNVDLFYITARGWRRREREDL 334
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + KEGV++AAD+RAS+G I +++V KI +I+ ++ AG D R
Sbjct: 9 KGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRL 68
Query: 114 LGIKCRLHELANKRRISVTGASKLLANIL-----YSYRGMGLSVGTMIAGWDETGPGLYY 168
L + L++ + +SV + LLANIL + Y G L + G+DE P L+
Sbjct: 69 LKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFL-----VGGYDEK-PRLFS 122
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
VD GG + + GSG +AY +LDS Y+ +MS+ + +LA +AI A RD +G
Sbjct: 123 VDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDG 182
Query: 229 ASVYYVGPNGWKKLSGDDVGEL 250
V + +G+K+ G ++ ++
Sbjct: 183 LLVVTITKDGYKEYRGAELEKM 204
>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
gi|302595717|sp|A2BN24.1|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
Length = 204
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
Query: 67 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 126
V++AA+ R S GG+I S++ +K+ +I Y+ +AG AD Q + L + + +
Sbjct: 20 VVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADLQAISKILRAEIEYYNIVTG 79
Query: 127 RRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPG-LYYVDSEGGRLKGTRFSVGS 185
RRISV ++LLA ILYSY+ T++ G + G LY +D G ++ ++GS
Sbjct: 80 RRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVMDPLGSLIEDDYAAIGS 139
Query: 186 GSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
G+P A G+L++GY DMS+++A +LA A+ A RDA SG
Sbjct: 140 GAPIAIGILENGYSKDMSVDDAKKLAIAAVRAAIERDAMSG 180
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + KEGV++AAD+RAS+G I +++V KI +I+ ++ AG D R
Sbjct: 6 KGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRL 65
Query: 114 LGIKCRLHELANKRRISVTGASKLLANIL-----YSYRGMGLSVGTMIAGWDETGPGLYY 168
L + L++ + +SV + LLANIL + Y G L + G+DE P L+
Sbjct: 66 LKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFL-----VGGYDEK-PRLFS 119
Query: 169 VDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
VD GG + + GSG +AY +LDS Y+ +MS+ + +LA +AI A RD +G
Sbjct: 120 VDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDG 179
Query: 229 ASVYYVGPNGWKKLSGDDVGEL 250
V + +G+K+ G ++ ++
Sbjct: 180 LLVVTITKDGYKEYRGAELEKM 201
>gi|341897914|gb|EGT53849.1| CBN-PBS-1 protein [Caenorhabditis brenneri]
Length = 239
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
+ GTT +A + GV+V DSR S G +I+S++ KI I M+ +G AAD Q
Sbjct: 21 STGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITENMVVCRSGSAADTQAIAD 80
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
++ + + +++ +S++ LY+YR LS ++AGWD G Y
Sbjct: 81 IAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQ-LSASVLVAGWDAELGGQVYAIPI 139
Query: 173 GGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG + R + GSGS + G LDS ++ D++++E + ++A+ ATFRD +SGGV +
Sbjct: 140 GGFVSRQRSTASGSGSTFVQGFLDSQWRPDLTLDECKAIVKQAVGLATFRDGSSGGVVRL 199
Query: 232 YYVGPNGWK 240
+ G K
Sbjct: 200 AVIDKTGSK 208
>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
gi|302595734|sp|C6A3R1.1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
Length = 199
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 98/177 (55%), Gaps = 1/177 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
++ GTTT+ K+GV++AAD++AS+ + + ++KKI+ I + T AG D Q
Sbjct: 1 MEKKTGTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPITDRIAITTAGSVGDLQA 60
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
R L + + ++ + ++ + LL+NIL + V +I G+ E P L +
Sbjct: 61 LARMLEAEAKYYQFTWGKPMTAKAMANLLSNILNESKWFPYMVQIIIGGYVEE-PTLASL 119
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
D GG + + GSGSP+A +L+ GYK DMSIE+A ELA +A+ A RD +G
Sbjct: 120 DPLGGLIFDNYTTTGSGSPFAIAILEDGYKEDMSIEDARELAIKAVRTAGKRDVYTG 176
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 102/187 (54%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
G T + K+GV++AA+ R S G Y S + KK+ IN + AG AD Q R L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFIINDKLAIASAGIIADMQTLARIL 67
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ +EL +++ +V +KLL+ I++S R + ++ G DE GP L +D G
Sbjct: 68 KLNVMSYELEVRKKPTVRAMAKLLSIIMFSRRLLPFYAEVLVGGVDEEGPHLIVMDPLGS 127
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ ++G+G+ A +LD+ Y+ D+S++EA +LA +AI A RD SGG + V
Sbjct: 128 LIEDNYAALGTGAKLAVSLLDATYRPDISLQEAKKLAVQAIKAAIERDPVSGGGIDLAVV 187
Query: 235 GPNGWKK 241
NG ++
Sbjct: 188 DNNGARE 194
>gi|384489923|gb|EIE81145.1| proteasome subunit beta type-6 [Rhizopus delemar RA 99-880]
Length = 224
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GT+ +A +K+GV++ ADSR + G YI+++ K+ +++ + +G AAD Q +
Sbjct: 21 GTSIMAVAYKDGVILGADSRTTTGAYIANRVTDKLTKVHDKIYCCRSGSAADTQAIADIV 80
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET-GPGLYYVDSEG 173
+++ + SV AS L + Y + L G ++AGWDE GP +Y V G
Sbjct: 81 HYYLQMYSVNEDEAPSVRTASALFQELCYQNKD-NLMAGIIVAGWDEKDGPSVYNV-PLG 138
Query: 174 GRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
G L F++G SGS Y YG D+ YK DM+ EE E + ++ A RD +SGGV +
Sbjct: 139 GSLHKAPFAIGGSGSTYIYGYCDAKYKDDMTREECEEFVKNSLALAMSRDGSSGGVIRMA 198
Query: 233 YVGPNGWKKL 242
+ +G ++L
Sbjct: 199 VITKDGVERL 208
>gi|428174475|gb|EKX43371.1| 20S proteasome subunit beta type 7 [Guillardia theta CCMP2712]
Length = 271
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 30 SFSLPLSTDFDEFQKD--TKATLKHAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQS 85
SF L + E Q + + + +K AK GTT IFK+GV++ AD+RA+ G ++ ++
Sbjct: 13 SFDLCKRNAWLESQANYGSSSIIKKAKKTGTTIAGIIFKDGVVLGADTRATSGPIVADKN 72
Query: 86 VKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSY 145
+KI + P + AG +ADC+ + LH L R V A +L+ L+ Y
Sbjct: 73 CEKIHYLAPNIFCCGAGTSADCENVTEMMASNLTLHRLNTGRECRVITAVTMLSQYLFRY 132
Query: 146 RGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 205
+G +S ++ G D TGP LY + G + ++GSGS A V ++GY+ + +
Sbjct: 133 QGY-ISAALVVGGVDSTGPSLYTIHPHGSVDQLPFVTMGSGSLAAMAVFEAGYQEGLERQ 191
Query: 206 EAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYH-----YYP 256
+L R AI D SG + + P G ++ D E Y +YP
Sbjct: 192 PGIDLVRAAIQSGIDNDLGSGSNVDITVITPEGVQRFRNLDKAEPKYKSKNPLFYP 247
>gi|332021957|gb|EGI62287.1| Proteasome subunit beta type-7 [Acromyrmex echinatior]
Length = 277
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 21/262 (8%)
Query: 21 LCPELSAAPSFSLPLSTDFDEFQKDTKATLK-------HAKGTTTLAFIFKEGVMVAADS 73
L PE+S P FS FD Q++T K GTT ++K+GV++ D+
Sbjct: 5 LVPEISP-PGFS------FDLCQRNTFLAKKGFDSPKVKKTGTTITGVVYKDGVILGGDT 57
Query: 74 RASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTG 133
RA+ ++ + KI + P M AG AAD + + + LH L R + V
Sbjct: 58 RATEDTIVADKYSLKIHYLAPNMYCCGAGTAADTEMTTEMIASQLELHRLNTGRVVPVCT 117
Query: 134 ASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGV 193
A+ L+ +L+ Y+G + ++ G+D GP LY + G K ++GSGS A V
Sbjct: 118 ANTLIKQMLFRYQG-HIGAALILGGFDLDGPQLYCIYPHGSTEKLKYTTMGSGSLAAMSV 176
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDD------V 247
L+S +K DMS EEA +L AI F D ASG + + N + L D +
Sbjct: 177 LESTWKPDMSEEEAKKLVADAIRAGVFNDLASGSNVDLCIIRKNSVEYLRPYDTASVKGI 236
Query: 248 GELHYHYYPVTPSTVEQEMAEV 269
++ Y Y P T S + + + +
Sbjct: 237 RQISYCYKPGTTSVLTKTIQPI 258
>gi|225704850|gb|ACO08271.1| Proteasome subunit beta type 6 precursor [Oncorhynchus mykiss]
Length = 212
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGY-ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
GTT LA F GV++ +DSRAS+GGY +SS+++ K+I+++ + +AG AD Q +
Sbjct: 11 GTTILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCCIAGSLADAQAAIKA 70
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 172
+ H + + V A+ +L + Y+ + L G + AGWD + GP +Y V +
Sbjct: 71 AKFQISFHSIQMESPPLVKAAASVLKELCYNNKEE-LQAGFITAGWDRKKGPQVYTV-AL 128
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L F++G SGS Y YG D+ YK DMS EE + A A+ A RD SGGVA +
Sbjct: 129 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALAMGRDNVSGGVAHL 188
Query: 232 YYVGPNGWKK--LSGDDVGELH 251
+ G + + GD + + H
Sbjct: 189 VVITEEGVEHVVIPGDKLPKFH 210
>gi|448609025|ref|ZP_21660304.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
gi|445747402|gb|ELZ98858.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
Length = 243
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 2/198 (1%)
Query: 41 EFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTM 100
E + D+ + GTTT+ EGV++A D RAS+G +SS+ V+K+ E++P T+
Sbjct: 35 ERRADSLGDKETKTGTTTVGIKTDEGVVLATDMRASLGPMVSSKDVQKVEEVHPTGALTI 94
Query: 101 AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
AG + Q +L + RL+E +S+ S L+ N L + G V ++ G D
Sbjct: 95 AGSVSAAQSLISSLRAEVRLYESRRGEDMSMQALSTLVGNFLRT--GGFYIVQPILGGVD 152
Query: 161 ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATF 220
+ G +Y +D G L+ GSGS YA GVL+ + D+SI+EA ++A +AI A
Sbjct: 153 DDGAHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFSDDLSIDEAKQVATKAIRSAVE 212
Query: 221 RDAASGGVASVYYVGPNG 238
RD ASG ++ V G
Sbjct: 213 RDLASGNGINIAVVTDEG 230
>gi|374633123|ref|ZP_09705490.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373524607|gb|EHP69484.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 196
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 99/183 (54%), Gaps = 1/183 (0%)
Query: 56 TTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG 115
+T + ++GV++ A R S GGY+ S+S +K+ I+ + +G AG D Q R +
Sbjct: 6 STAIGIKVQDGVILGAVRRLSYGGYVLSKSARKVFTISRFGIGG-AGLFGDLQALTRIMN 64
Query: 116 IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGR 175
R +EL N R IS A+KLL+ ILY Y+ M + AG D+ P L+ +D G
Sbjct: 65 ANIRYYELYNGRPISARAAAKLLSIILYQYKYMPFISEVLFAGIDDGTPQLFVLDPLGSL 124
Query: 176 LKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVG 235
L +VGSG+ A GVL++ YK M++ +A ELA +++ + RD SG + +
Sbjct: 125 LDDIYAAVGSGARVAIGVLEAEYKDSMNLTQARELALKSLRASVERDVTSGDGIDLLIID 184
Query: 236 PNG 238
NG
Sbjct: 185 KNG 187
>gi|195169339|ref|XP_002025479.1| GL15166 [Drosophila persimilis]
gi|194108958|gb|EDW31001.1| GL15166 [Drosophila persimilis]
Length = 327
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GT+ + I+++GV++ AD+RA+ G +S ++ KI + ++ AG AAD +
Sbjct: 48 GTSIVGIIYRDGVILGADTRATEGPMVSDKNCSKIHYLQNHIYCCGAGTAADTEMITLTT 107
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ LH+++ KR + V AS +L L+ Y+G + ++ G D GP +Y S G
Sbjct: 108 SSQLNLHQMSTKRLVPVVCASIMLRRTLFRYQGH-IGAALVVGGVDRWGPQIYCNHSCGS 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K ++GSG+ A VL+ G+K D+ +E+ +L R AI F D SG + +
Sbjct: 167 NDKLPYAAMGSGTLAAMTVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226
Query: 235 GPNGWKKLSGDDV----GELHYHYYPVTPSTV 262
G K L D V GE YY STV
Sbjct: 227 TKAGAKYLRTDTVASERGERQEKYYIKPNSTV 258
>gi|393909340|gb|EFO25921.2| proteasome A-type and B-type family protein [Loa loa]
Length = 232
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTT +A F GV+V DSR S G YISS++ KI + M+ +G AAD Q +
Sbjct: 18 GTTLIAMEFDGGVVVGTDSRTSSGSYISSRATDKITPVTNRMVVCRSGSAADTQAISDIV 77
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
++ + + ++V ++++ N LY YR LS ++AG+D+ G Y GG
Sbjct: 78 KYYIEVYSMMEEEDVTVGRSAQIFRNFLYKYRD-SLSASVLVAGYDDVEGGQLYAIPLGG 136
Query: 175 RLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
+ R + GSGS + G LDS +K M+ E+ E+ A+ AT RD +SGGV +
Sbjct: 137 YVTRQRCAASGSGSTFVQGFLDSQWKSGMTAEKCKEIVLNAVALATIRDGSSGGVIRLAV 196
Query: 234 VGPNGWKKL 242
+ G +++
Sbjct: 197 IDKTGTQRM 205
>gi|389860550|ref|YP_006362789.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525453|gb|AFK50651.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 205
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 94/175 (53%), Gaps = 1/175 (0%)
Query: 66 GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELAN 125
GV++A + R + G+I S+SV+K+ I + AG D F +R L + + +EL +
Sbjct: 20 GVVLAGEKRMTYDGFILSKSVRKLFPITEHTAVGFAGLTGDMNFLYRVLKTEAKNYELEH 79
Query: 126 KRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGS 185
R I +KLL+ ILYSY+ + ++ G+DE P L+ +D+ G L+ ++GS
Sbjct: 80 GREIKTRSLAKLLSIILYSYKLFPMLTEAVVGGFDE-APSLFVLDAVGSLLEERYTALGS 138
Query: 186 GSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
GS A +++ Y+ DM +EEA LA +A+ A RD SG V + G K
Sbjct: 139 GSQLALSIIEQSYREDMPLEEAKNLAVKAVLAAIERDVLSGDGVDVLVITREGIK 193
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 1/165 (0%)
Query: 77 MGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASK 136
MG +I+S + +KI +I + T AG D Q R + ++ +L+ + ++V G +
Sbjct: 1 MGHFIASTTAQKIYQIADRVGLTTAGVVGDAQSLVRMIQVESKLYNMQRGEPMTVRGTTS 60
Query: 137 LLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTR-FSVGSGSPYAYGVLD 195
LL+N+L S R V ++ G D+ GP L+ +D+ GG ++ + + GSGSP AYGVL+
Sbjct: 61 LLSNVLASRRYFPFMVQLLLGGVDKKGPQLFSLDALGGSIQEQKVVATGSGSPTAYGVLE 120
Query: 196 SGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWK 240
+ Y +M++EE +L RAI++A RD+ASG V + G++
Sbjct: 121 ALYDPEMTVEEGMKLGVRAIHNAMKRDSASGDVIQAVKITAGGYE 165
>gi|409096228|ref|ZP_11216252.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 201
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ K+GV++AAD++AS+ + + +++KI+ I + T AG D Q R L
Sbjct: 8 GTTTVGIKVKDGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQALARML 67
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEG 173
+ R ++ R + + LL+NIL + V +I G+ DE P L +D+ G
Sbjct: 68 EAEARYYQFTWGRPMKTRAMANLLSNILNENKWFPYMVQILIGGYVDE--PELASLDALG 125
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
G + + GSGSP+A +++ GY+ DMS+EEA ELA RA+ A RD +G
Sbjct: 126 GLVFDEYTATGSGSPFAIAIIEDGYREDMSVEEAKELAVRAVRTAGKRDVYTG 178
>gi|325182083|emb|CCA16537.1| proteasome subunit beta type7 putative [Albugo laibachii Nc14]
Length = 320
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 42 FQKDTKATLKHAK-GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTM 100
+D T+K K GTT ++K+GV++ AD+R++ G + ++ +KI I P +
Sbjct: 63 LMQDGNLTIKAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCG 122
Query: 101 AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
AG AAD + + + LH L V A LL +L+ Y+G +S ++ G D
Sbjct: 123 AGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGH-ISAALVLGGVD 181
Query: 161 ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATF 220
TGP LY V G K ++GSGS A + + GYK DM+ EEA +L + AI F
Sbjct: 182 ATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVF 241
Query: 221 RDAASGGVASVYYV--GPNGWK 240
D SG + + GPNG +
Sbjct: 242 NDLGSGSNVDITIIKKGPNGVE 263
>gi|325182084|emb|CCA16538.1| proteasome subunit beta type7 putative [Albugo laibachii Nc14]
Length = 314
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 42 FQKDTKATLKHAK-GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTM 100
+D T+K K GTT ++K+GV++ AD+R++ G + ++ +KI I P +
Sbjct: 57 LMQDGNLTIKAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCG 116
Query: 101 AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
AG AAD + + + LH L V A LL +L+ Y+G +S ++ G D
Sbjct: 117 AGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGH-ISAALVLGGVD 175
Query: 161 ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATF 220
TGP LY V G K ++GSGS A + + GYK DM+ EEA +L + AI F
Sbjct: 176 ATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVF 235
Query: 221 RDAASGGVASVYYV--GPNGWK 240
D SG + + GPNG +
Sbjct: 236 NDLGSGSNVDITIIKKGPNGVE 257
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 111/206 (53%), Gaps = 2/206 (0%)
Query: 40 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99
D + + K +GTTT+ K+ V++AAD +A+ G Y++ ++VKKI+ + T
Sbjct: 16 DRYSIPKEVIEKAYRGTTTVGMALKDFVVLAADKKATAGLYVAHKNVKKIVRLTENSAIT 75
Query: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159
+AG AD Q + + + N R +S+ + LL IL Y+ V ++ G+
Sbjct: 76 IAGLVADAQTLADYIRAEAYYYYYINNRPMSIRSMASLLGLILNEYKYFPFIVQLILGGY 135
Query: 160 D-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHA 218
D G L+ +D G + + GSGSP A GV++SGY+ +MSI++A L +A+ A
Sbjct: 136 DYYEGAKLFSIDYFGDVTEERYTATGSGSPIAIGVIESGYRPEMSIDDAVSLVVKAVATA 195
Query: 219 TFRDAASGGV-ASVYYVGPNGWKKLS 243
+ RD SGG+ V +G + +++++
Sbjct: 196 SMRDVFSGGIGVDVVVIGKDFYREMT 221
>gi|391339580|ref|XP_003744126.1| PREDICTED: proteasome subunit beta type-6-like [Metaseiulus
occidentalis]
Length = 212
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTT +A FK+G+++AADSR S G Y++++ K+ +I + +G AAD Q +
Sbjct: 12 GTTLVAAHFKDGIVIAADSRTSSGSYVANRVADKLTKITDSIYCCRSGSAADTQCIADAV 71
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEG 173
+E+ + +V A+ + NI Y YR + G + AG+ DE G G+Y + G
Sbjct: 72 AYHLAFYEMQTGKPATVEAAANVFRNICYKYRD-DMVAGIICAGYDDERGGGIYSIPPGG 130
Query: 174 GRLKGTR-FSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVY 232
++ R S GSGS + G LD+ +K +MS EE +L +A+ A +D +SGGV +
Sbjct: 131 CLVEEKRVISAGSGSVFISGFLDALFKNNMSKEECVDLCLKAVSLAIHKDTSSGGVCRMA 190
Query: 233 YVGPNGWKK 241
+ +G ++
Sbjct: 191 VITKDGVER 199
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 99/187 (52%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
G T + GV++AA+ R S G Y S S KK+ ++ + AG AD Q + L
Sbjct: 8 GATAVGIKTAGGVVLAAEKRVSYGFYTLSSSGKKVFVVDDKLAIASAGIIADMQALAKIL 67
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ + +EL K++ SV +KLL+ +++S R M ++ G DE GP L +D G
Sbjct: 68 KLNAKSYELEMKKKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGVDEEGPHLIVMDPLGS 127
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
++ ++G+G+ A VLD Y+ DMSIEEA +LA +A+ A RD SGG + V
Sbjct: 128 LIEDNYAALGTGAKLAAAVLDGNYRNDMSIEEAKKLAVQALKAAIERDPVSGGGIDLVVV 187
Query: 235 GPNGWKK 241
G ++
Sbjct: 188 DEKGARE 194
>gi|24639979|ref|NP_572267.1| proteasome beta2R1 subunit [Drosophila melanogaster]
gi|7290639|gb|AAF46088.1| proteasome beta2R1 subunit [Drosophila melanogaster]
gi|194353118|emb|CAQ53351.1| CG18341-PA [Drosophila melanogaster]
gi|194353120|emb|CAQ53352.1| CG18341-PA [Drosophila melanogaster]
gi|194353122|emb|CAQ53353.1| CG18341-PA [Drosophila melanogaster]
gi|194353124|emb|CAQ53354.1| CG18341-PA [Drosophila melanogaster]
gi|194353126|emb|CAQ53355.1| CG18341-PA [Drosophila melanogaster]
gi|194353128|emb|CAQ53356.1| CG18341-PA [Drosophila melanogaster]
gi|194353130|emb|CAQ53357.1| CG18341-PA [Drosophila melanogaster]
gi|194353134|emb|CAQ53359.1| CG18341-PA [Drosophila melanogaster]
gi|194353136|emb|CAQ53360.1| CG18341-PA [Drosophila melanogaster]
gi|220949894|gb|ACL87490.1| CG18341-PA [synthetic construct]
gi|223968609|emb|CAR94035.1| CG18341-PA [Drosophila melanogaster]
gi|223968611|emb|CAR94036.1| CG18341-PA [Drosophila melanogaster]
gi|223968617|emb|CAR94039.1| CG18341-PA [Drosophila melanogaster]
gi|223968619|emb|CAR94040.1| CG18341-PA [Drosophila melanogaster]
gi|223968621|emb|CAR94041.1| CG18341-PA [Drosophila melanogaster]
gi|223968623|emb|CAR94042.1| CG18341-PA [Drosophila melanogaster]
gi|223968625|emb|CAR94043.1| CG18341-PA [Drosophila melanogaster]
gi|223968627|emb|CAR94044.1| CG18341-PA [Drosophila melanogaster]
Length = 307
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GT+ + I+K+GV++ AD+RA+ G +S ++ KI + ++ AG AAD +
Sbjct: 48 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ LH L +RR+ V AS +L L+ Y+G + ++ G D TGP LY + G
Sbjct: 108 SAELDLHRLNTERRVPVVCASMMLRRTLFRYQGH-IGAALVMGGVDTTGPQLYCIYPCGS 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K ++GSG+ A VL+ G+K D+ +E+ +L R AI F D SG + +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226
Query: 235 GPNGWKKLSGDDV 247
G L D +
Sbjct: 227 TAKGAVYLRTDTI 239
>gi|346466077|gb|AEO32883.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTT +FK+GV++ AD+RA+ GG+++ ++ KI + P + AG AAD R +
Sbjct: 77 GTTIAGIVFKDGVILGADTRATAGGFVADKNCNKIHYLAPNIYCCGAGTAADTVKTTRMI 136
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ LH LA R + V A+++L +L+ Y+G +S ++ G D TG L + G
Sbjct: 137 SSQLELHRLATGRIVPVCTANRMLKQMLFRYQGY-ISAALVLGGVDTTGGVLCSIHPHGS 195
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ ++GSGS A V + +K DMS+EE +L R AI F D SG + +
Sbjct: 196 TDRLPFVTMGSGSLAAMAVFERDWKPDMSLEEGKKLVRDAIAAGIFNDLGSGSNVDLCVI 255
Query: 235 GPNGWKKL----SGDDVGELHYHY 254
G + + GE H Y
Sbjct: 256 TRGGLAHVRPYEEANKKGERHLSY 279
>gi|325182082|emb|CCA16536.1| proteasome subunit beta type7 putative [Albugo laibachii Nc14]
Length = 311
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 42 FQKDTKATLKHAK-GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTM 100
+D T+K K GTT ++K+GV++ AD+R++ G + ++ +KI I P +
Sbjct: 54 LMQDGNLTIKAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCG 113
Query: 101 AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD 160
AG AAD + + + LH L V A LL +L+ Y+G +S ++ G D
Sbjct: 114 AGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGH-ISAALVLGGVD 172
Query: 161 ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATF 220
TGP LY V G K ++GSGS A + + GYK DM+ EEA +L + AI F
Sbjct: 173 ATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVF 232
Query: 221 RDAASGGVASVYYV--GPNGWK 240
D SG + + GPNG +
Sbjct: 233 NDLGSGSNVDITIIKKGPNGVE 254
>gi|223968605|emb|CAR94033.1| CG18341-PA [Drosophila melanogaster]
gi|223968607|emb|CAR94034.1| CG18341-PA [Drosophila melanogaster]
gi|223968613|emb|CAR94037.1| CG18341-PA [Drosophila melanogaster]
gi|223968615|emb|CAR94038.1| CG18341-PA [Drosophila melanogaster]
Length = 307
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GT+ + I+K+GV++ AD+RA+ G +S ++ KI + ++ AG AAD +
Sbjct: 48 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ LH L +RR+ V AS +L L+ Y+G + ++ G D TGP LY + G
Sbjct: 108 SAELDLHRLNTERRVPVVCASMMLRRTLFRYQGH-IGAALVMGGVDTTGPQLYCIYPCGS 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K ++GSG+ A VL+ G+K D+ +E+ +L R AI F D SG + +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226
Query: 235 GPNGWKKLSGDDV 247
G L D +
Sbjct: 227 TAKGAVYLRTDTI 239
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
Query: 54 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 113
KGTTT+ + K+GV++AAD RAS+G + +++V KI +I+ ++ AG D R
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNIVYARNVTKIHKIDEHLAIAGAGDVGDILNLVRL 65
Query: 114 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 173
L + +L+ R +S + LLANIL Y+ ++ G+DE LY VD+ G
Sbjct: 66 LRAEAKLYYAQFGREMSARALATLLANILNGYKYFPYMAWFLVGGYDEKAR-LYSVDAVG 124
Query: 174 GRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYY 233
G + + GSG +AY +LD+ Y D++++E +LA +AI A RD SG V
Sbjct: 125 GITEDKYMAAGSGMEFAYSILDAEYSDDITVKEGVKLAVKAINTAIKRDVFSGDGILVVT 184
Query: 234 VGPNGWKKLS 243
+ G+ ++S
Sbjct: 185 ITKEGYSEIS 194
>gi|448530967|ref|ZP_21620801.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
gi|445707407|gb|ELZ59261.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
Length = 243
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ ++GV++A D RAS+GG +SS+ V+K+ EI+P T+AG + Q L
Sbjct: 49 GTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L+E + +S+ S L N+L S G V ++ G D+ G +Y +D+ GG
Sbjct: 109 RAETSLYEARRGKDMSMEALSTLTGNLLRS--GAFYIVQPILGGVDDEGAHIYSIDALGG 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ GSGS YA GVL+ Y ++I+EA +A +AI A RD ASG +V V
Sbjct: 167 TTEEEYTVTGSGSQYALGVLEQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGINVAVV 226
Query: 235 GPNG 238
+G
Sbjct: 227 TDDG 230
>gi|448435232|ref|ZP_21586709.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
gi|445684056|gb|ELZ36442.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
Length = 243
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTTT+ ++GV++A D RAS+GG +SS+ V+K+ EI+P T+AG + Q L
Sbjct: 49 GTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ L+E + +S+ S L N+L S G V ++ G D+ G +Y +D+ GG
Sbjct: 109 RAETSLYEARRGKDMSMEALSTLTGNLLRS--GAFYIVQPILGGVDDEGAHIYSIDALGG 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
+ GSGS YA GVL+ Y ++I+EA +A +AI A RD ASG +V V
Sbjct: 167 TTEEEYTVTGSGSQYALGVLEQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGINVAVV 226
Query: 235 GPNG 238
+G
Sbjct: 227 TDDG 230
>gi|28317309|gb|AAO39651.1| AT12292p, partial [Drosophila melanogaster]
Length = 308
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GT+ + I+K+GV++ AD+RA+ G +S ++ KI + ++ AG AAD +
Sbjct: 49 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 108
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ LH L +RR+ V AS +L L+ Y+G + ++ G D TGP LY + G
Sbjct: 109 SAELDLHRLNTERRVPVVCASMMLRRTLFRYQGH-IGAALVMGGVDTTGPQLYCIYPCGS 167
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K ++GSG+ A VL+ G+K D+ +E+ +L R AI F D SG + +
Sbjct: 168 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 227
Query: 235 GPNGWKKLSGDDV 247
G L D +
Sbjct: 228 TAKGAVYLRTDTI 240
>gi|161528202|ref|YP_001582028.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595718|sp|A9A4A1.1|PSB1_NITMS RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|160339503|gb|ABX12590.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 198
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Query: 52 HAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWH 111
+ G T + F GV+ A++ R + G ++ S++ KK I P + T AG AD Q
Sbjct: 4 YMPGATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILS 63
Query: 112 RNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDS 171
+ ++ ++ KR + +K+++N++Y R L ++ G + P +Y +D
Sbjct: 64 LQIAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVDK-PIMYTLDP 122
Query: 172 EGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
G L +VG+G+ A GVLD +K +M+ +EA +LA+RA+ A+ RD+ASG V
Sbjct: 123 LGSVLPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASGDGVDV 182
Query: 232 YYVGPNGWKKLS 243
+ +G ++ +
Sbjct: 183 LVITKDGTEEFT 194
>gi|194353116|emb|CAQ53350.1| CG18341-PA [Drosophila melanogaster]
Length = 307
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GT+ + I+K+GV++ AD+RA+ G +S ++ KI + ++ AG AAD +
Sbjct: 48 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ LH L +RR+ V AS +L L+ Y+G + ++ G D TGP LY + G
Sbjct: 108 SAELDLHRLNTERRVPVVCASMMLRRTLFRYQGH-IGAALVMGGVDTTGPQLYCIYPCGS 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K ++GSG+ A VL+ G+K D+ +E+ +L R AI F D SG + +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226
Query: 235 GPNGWKKLSGDDV 247
G L D +
Sbjct: 227 TAKGAVYLRTDTI 239
>gi|195121614|ref|XP_002005315.1| GI20414 [Drosophila mojavensis]
gi|193910383|gb|EDW09250.1| GI20414 [Drosophila mojavensis]
Length = 222
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
+ GTT +A F GV++ ADSR S G Y++++ K+ +I+ + +G AAD Q
Sbjct: 13 STGTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTQISDKIYCCRSGSAADTQAIAD 72
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
+ H + V A+ N Y+YR L G ++AGWDE G Y
Sbjct: 73 IVAYSLNYHRNQTNKEPLVWEAASEFRNFCYNYRD-SLMAGIIVAGWDEERGGQVYSVPL 131
Query: 173 GGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L ++G SGS Y YG + Y+ M +EE + ++A+ HA + D +SGGV +
Sbjct: 132 GGMLTHESCTIGGSGSSYIYGFVKEHYRLGMQMEECVDFVKKAVQHAIYHDGSSGGVVRI 191
Query: 232 YYVGPNGWKK 241
+ +G ++
Sbjct: 192 GIITKDGIER 201
>gi|195430422|ref|XP_002063254.1| GK21488 [Drosophila willistoni]
gi|194159339|gb|EDW74240.1| GK21488 [Drosophila willistoni]
Length = 225
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
+ GTT +A F GV+V ADSR S G Y++++ K+ I + +G AAD Q
Sbjct: 12 STGTTIMAVEFDGGVVVGADSRTSSGAYVANRVTDKLTRITDKIYCCRSGSAADTQAIAD 71
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
+ HE+ R V A+ N Y+YR L G ++AGWD G Y
Sbjct: 72 IVAYSLNYHEIQTNRDAEVWEAASEFRNFCYNYRD-SLMAGIIVAGWDAQRGGQVYSIPL 130
Query: 173 GGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L ++ GSGS + YG + Y+ M EE E ++A+ HA + D +SGGV +
Sbjct: 131 GGMLTREACTIGGSGSSFIYGFVREHYREGMQKEECVEFVKKAVQHAIYHDGSSGGVVRI 190
Query: 232 YYVGPNGWKK 241
+ +G ++
Sbjct: 191 GIITEDGIER 200
>gi|332796202|ref|YP_004457702.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332693937|gb|AEE93404.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 209
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Query: 50 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 109
+K KGTTT+ + K+GV++AAD RAS G +++++ V+KI+ I + T AG AD QF
Sbjct: 6 IKTWKGTTTVGILAKDGVVLAADRRASEGFFVANKMVRKILYITDNIGITTAGSVADLQF 65
Query: 110 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
+ L + ++ R +V + LAN L + V +I G+D T P LY +
Sbjct: 66 LYYVLKNLYHYNYISGNRPTTVKALATYLANTLSQNKYFPYLVQILIGGYD-TQPRLYNL 124
Query: 170 DSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
D G + + GSGSP A GVL+ Y+ D++ ++A ++A RA+ A RD+ +G
Sbjct: 125 DYFGDMTEEKYVATGSGSPVAMGVLEDEYREDLTADQAMDIAARAVLSAIKRDSYTG 181
>gi|291237252|ref|XP_002738545.1| PREDICTED: proteasome beta 9 subunit isoform 1 proprotein-like
isoform 1 [Saccoglossus kowalevskii]
Length = 233
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 2/192 (1%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
+H GT+ +A FK+GV++ ADSR + G YI+++ K+ ++ + +G AA Q
Sbjct: 29 EHMTGTSIMAVEFKDGVVIGADSRTTTGAYIANRVTDKLTPVHERIYCCRSGSAAATQAV 88
Query: 111 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 170
+ H + V A+ L + Y+YR L+ G + AGWDE G Y
Sbjct: 89 ADIVSYHLNFHSIEMNEPPLVKTAANLFKEMCYNYRDE-LTAGIICAGWDEREGGQVYTI 147
Query: 171 SEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVA 229
GG L FS+ GSGS Y YG +DS +K DM+ EE + ++ A RD +SGGV
Sbjct: 148 PLGGMLLRQPFSIGGSGSTYIYGYVDSSFKKDMTKEECLKFCAHSLALAMNRDGSSGGVV 207
Query: 230 SVYYVGPNGWKK 241
+ + G ++
Sbjct: 208 RLAAITKEGVER 219
>gi|194353132|emb|CAQ53358.1| CG18341-PA [Drosophila melanogaster]
Length = 307
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GT+ + I+K+GV++ AD+RA+ G +S ++ KI + ++ AG AAD +
Sbjct: 48 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTT 107
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
+ LH L +RR+ V AS +L L+ Y+G + ++ G D TGP LY + G
Sbjct: 108 SAELDLHRLNTERRVPVVCASMMLRRTLFRYQGH-IGAALVMGGVDTTGPQLYCIYPCGS 166
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYV 234
K ++GSG+ A VL+ G+K D+ +E+ +L R AI F D SG + +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLGLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226
Query: 235 GPNGWKKLSGDDV 247
G L D +
Sbjct: 227 TAKGAVYLRTDTI 239
>gi|224073935|ref|XP_002191642.1| PREDICTED: proteasome subunit beta type-7 [Taeniopygia guttata]
Length = 277
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 1/207 (0%)
Query: 43 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 102
QK + GTT IFK+GV++ AD+RA+ G ++ ++ KI I+P + AG
Sbjct: 31 QKGLRVPAPRKTGTTIAGVIFKDGVVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAG 90
Query: 103 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 162
AAD + + + LH L+ R V A+++L +L+ Y+G + ++ G D T
Sbjct: 91 TAADTEMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVT 149
Query: 163 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRD 222
GP LY + G K ++GSGS A V + YK DM EEA +L R AI + D
Sbjct: 150 GPHLYSIHPHGSTDKLPYVTMGSGSLAAMAVFEDKYKPDMEEEEAKQLVRDAIAAGIYND 209
Query: 223 AASGGVASVYYVGPNGWKKLSGDDVGE 249
SG + + + L DV
Sbjct: 210 LGSGSNIDICVISKSKLDFLRPYDVAN 236
>gi|340381844|ref|XP_003389431.1| PREDICTED: proteasome subunit beta type-7-like [Amphimedon
queenslandica]
Length = 271
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114
GTT +FK+GV++ AD+RA+ G I+ ++ KI I+ + AG AAD ++ +
Sbjct: 37 GTTIAGIVFKDGVILGADTRATEGTVIADKNCAKIHYISKNIYCCGAGTAADTEYTTETI 96
Query: 115 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 174
LH L+ R+ V A +LL LY Y+G + ++ G D TGP L+ V + G
Sbjct: 97 SSDIELHRLSTGRKPRVATACRLLKQYLYRYQGH-IGAYLVLGGVDTTGPHLFTVHAHGS 155
Query: 175 RLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVAS---- 230
K ++GSGS A V +S Y +M +EE +L R AI F D SG
Sbjct: 156 TDKLPYVTMGSGSLAAMAVFESHYTPNMGVEEGKKLVRDAIAGGIFNDLGSGSNVDLCVI 215
Query: 231 ----VYYVGPNGWKKLSGDDVGELHY 252
V Y+ P + G+ VG+ Y
Sbjct: 216 TADGVDYIRPYDVANVKGERVGDYTY 241
>gi|242014499|ref|XP_002427927.1| proteasome subunit beta type 6 precursor, putative [Pediculus
humanus corporis]
gi|212512411|gb|EEB15189.1| proteasome subunit beta type 6 precursor, putative [Pediculus
humanus corporis]
Length = 226
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 120/240 (50%), Gaps = 28/240 (11%)
Query: 21 LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGY 80
L P+L + LP D Q++T GTT +A + GV++ DSR + GGY
Sbjct: 4 LAPQLKGHEAIPLP-----DWMQEETT-------GTTIMAVEYDGGVVIGGDSRTTTGGY 51
Query: 81 ISSQSVKKIIEINPYMLGTMAGGAADCQF------WHRNLGIKCRLHELANKRRISVTGA 134
++++ K+ +I + +G AAD Q +H NL + EL ++ +S A
Sbjct: 52 VANRFTDKLTKITDRIYCCRSGSAADTQAIADIVEYHMNL----QNIELGSESLVST--A 105
Query: 135 SKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVG-SGSPYAYGV 193
+ + I YSYR L+ G ++AG+D G Y GG L+ + G SGS Y YG
Sbjct: 106 ANVFKEICYSYRD-SLTAGIIVAGYDSLYGGQVYCIPIGGMLQRQNVATGGSGSTYVYGY 164
Query: 194 LDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKK--LSGDDVGELH 251
+DS YK +MS EE+ + A RD++SGGV + + NG ++ + G+D+ + +
Sbjct: 165 VDSHYKPNMSKEESVNFVTNTVALAMMRDSSSGGVIRLGIIDENGIERRLIKGEDIPKFY 224
>gi|156543654|ref|XP_001607442.1| PREDICTED: proteasome subunit beta type-7 [Nasonia vitripennis]
Length = 277
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 110/241 (45%), Gaps = 11/241 (4%)
Query: 21 LCPELSAAPSFSLPLSTDFDEFQKDTKATLKHAK-GTTTLAFIFKEGVMVAADSRASMGG 79
LCPE+ AP FS L K K K GTT + I+K+GV++ AD+RA+ G
Sbjct: 5 LCPEI-PAPGFSFELCQRNALLAKKGYPAPKAQKTGTTIVGIIYKDGVILGADTRATEGS 63
Query: 80 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 139
++ + +KI + M AG AAD + + + LH L R + V ASKLL
Sbjct: 64 IVADKKSEKIHYLAKNMYCCGAGTAADTEMTTEMISSQLELHRLNTGRIVPVVTASKLLK 123
Query: 140 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYK 199
+L+ ++G + ++ G D +GP LY + G ++GSGS A V +S +K
Sbjct: 124 QLLFRHQGH-IGAALIVGGVDNSGPHLYCIYPHGSCDTLQYTTMGSGSLAAMSVFESRWK 182
Query: 200 FDMSIEEAAELARRAIYHATFRDAASGGVASVY--------YVGPNGWKKLSGDDVGELH 251
MS EE EL AI F D SG V Y+ P + G+ G
Sbjct: 183 PGMSEEEGKELVADAIRAGVFNDLGSGNSVDVCVIRKGSTDYIRPYELSCVKGERQGSYR 242
Query: 252 Y 252
Y
Sbjct: 243 Y 243
>gi|194882671|ref|XP_001975434.1| GG22308 [Drosophila erecta]
gi|190658621|gb|EDV55834.1| GG22308 [Drosophila erecta]
Length = 224
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 53 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHR 112
+ GTT +A F GV++ ADSR S G Y++++ K+ I + +G AAD Q
Sbjct: 13 STGTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITDKVYCCRSGSAADTQAIAD 72
Query: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172
+ HE + V A+ N YSYR L G ++AGWDE G Y
Sbjct: 73 IVAYSLNYHENQTNKEALVFEAASEFRNYCYSYR-ESLLAGIIVAGWDEQRGGQVYSIPL 131
Query: 173 GGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASV 231
GG L ++ GSGS + YG + Y+ +M +EE ++A+ HA + D +SGGV +
Sbjct: 132 GGMLTRESCTIGGSGSSFIYGFVREHYRPNMQLEECVSFVKKAVQHAIYHDGSSGGVVRI 191
Query: 232 YYVGPNGWKK 241
+ +G ++
Sbjct: 192 GIITKDGIER 201
>gi|212224577|ref|YP_002307813.1| proteasome subunit beta 2 [Thermococcus onnurineus NA1]
gi|302595811|sp|B6YXV3.1|PSB2_THEON RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|212009534|gb|ACJ16916.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
Length = 200
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 64 KEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHEL 123
K+G+++AAD++AS+G + + +++KII I + T AG D Q R L + R ++
Sbjct: 16 KDGIVLAADTQASLGHMVETLNIRKIIPITDRIAITTAGSVGDVQALARMLEAEARYYQF 75
Query: 124 ANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV 183
+ +S + LL+NIL + V ++ G+ E P L +D GG + +
Sbjct: 76 TWGKPMSTKAMANLLSNILNGNKWFPYLVQIILGGYVEE-PTLANLDPLGGLIFDDYTAT 134
Query: 184 GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASG 226
GSGSP+A VL+ GYK DMSIEEA ELA RA+ A RD +G
Sbjct: 135 GSGSPFAIAVLEDGYKKDMSIEEAKELAVRAVRTAGKRDVYTG 177
>gi|443696644|gb|ELT97307.1| hypothetical protein CAPTEDRAFT_156053 [Capitella teleta]
Length = 231
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 51 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 110
+H GTT +A + GV+V ADSR + G Y++++ K+ +++ Y+ +G AAD Q
Sbjct: 27 EHLTGTTIVAVEYDGGVVVGADSRTTTGSYVANRVTDKLTKVSDYIYCCRSGSAADTQAI 86
Query: 111 HRNLGIKCRLHELA-NKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 169
+ +H+ N+ + TGAS + ++ Y+YR LS G + AGWD+ G Y
Sbjct: 87 SDIVSYHLSVHKAELNEEPLVHTGAS-IFQDLCYNYRDQ-LSAGIICAGWDKRKGGQVYS 144
Query: 170 DSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGV 228
GG FS+ GSGS Y YG +DS +K M+ EE + A+ A RD +SGG+
Sbjct: 145 IPLGGMCVRVPFSIGGSGSTYLYGWVDSAFKEKMTKEECQKFVLNAVTLAINRDGSSGGI 204
Query: 229 ASVYYVGPNGWKK 241
++ + +G ++
Sbjct: 205 CNLATISVDGVER 217
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,351,431,509
Number of Sequences: 23463169
Number of extensions: 181502673
Number of successful extensions: 458158
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3546
Number of HSP's successfully gapped in prelim test: 2093
Number of HSP's that attempted gapping in prelim test: 450694
Number of HSP's gapped (non-prelim): 5746
length of query: 272
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 132
effective length of database: 9,074,351,707
effective search space: 1197814425324
effective search space used: 1197814425324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)