Query 024138
Match_columns 272
No_of_seqs 89 out of 115
Neff 2.2
Searched_HMMs 29240
Date Mon Mar 25 03:03:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024138.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024138hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vjx_A Putative ferritin-like 96.8 0.00075 2.6E-08 53.3 3.1 51 139-192 15-65 (157)
2 2fzf_A Hypothetical protein; s 96.5 0.0017 5.9E-08 51.5 3.4 56 139-196 21-76 (175)
3 2oh3_A Rubrerythrin, COG1633: 96.3 0.0024 8.2E-08 50.6 3.3 57 139-195 6-63 (167)
4 1zpy_A Hypothetical protein NE 94.7 0.015 5.3E-07 45.8 2.6 69 124-196 6-74 (95)
5 3mjo_A Ribonucleotide reductas 93.0 0.032 1.1E-06 49.3 1.6 43 151-195 172-214 (296)
6 3dhz_A Ribonucleotide reductas 92.8 0.035 1.2E-06 49.8 1.6 42 151-194 173-214 (329)
7 2rcc_A Ribonucleoside-diphosph 92.5 0.093 3.2E-06 46.9 3.9 57 138-196 174-234 (346)
8 1syy_A Ribonucleoside-diphosph 92.3 0.13 4.5E-06 46.1 4.6 59 136-196 178-241 (346)
9 3k6c_A Uncharacterized protein 92.0 0.081 2.8E-06 41.9 2.6 67 126-196 8-74 (95)
10 1vjx_A Putative ferritin-like 92.0 0.11 3.7E-06 40.9 3.3 54 139-194 101-154 (157)
11 1mxr_A Ribonucleotide reductas 91.9 0.13 4.5E-06 46.7 4.3 61 134-196 188-252 (375)
12 2e0z_A Virus-like particle; ba 91.9 0.03 1E-06 51.5 0.0 52 138-191 19-71 (345)
13 2o1z_A Ribonucleotide reductas 91.6 0.077 2.6E-06 47.3 2.4 44 151-196 196-239 (311)
14 2fzf_A Hypothetical protein; s 91.5 0.13 4.5E-06 40.6 3.3 63 139-204 106-168 (175)
15 1za0_A Possible acyl-[acyl-car 91.1 0.08 2.7E-06 47.7 1.9 41 149-191 158-198 (275)
16 2oh3_A Rubrerythrin, COG1633: 91.1 0.15 5.2E-06 40.2 3.4 54 139-194 94-147 (167)
17 4dr0_A Ribonucleoside-diphosph 90.9 0.22 7.6E-06 45.2 4.7 58 130-189 165-226 (350)
18 1h0o_A Ribonucleoside-diphosph 90.6 0.47 1.6E-05 43.9 6.6 44 151-196 238-281 (390)
19 3ee4_A Probable ribonucleoside 90.6 0.1 3.5E-06 46.8 2.1 46 151-198 181-227 (323)
20 2p1i_A Ribonucleotide reductas 90.2 0.13 4.5E-06 46.5 2.5 44 151-196 197-240 (349)
21 2qqy_A Sigma B operon; dodecam 89.1 0.41 1.4E-05 35.5 4.1 62 135-196 7-69 (149)
22 2uw1_A Desaturase, plastid del 89.0 0.15 5.3E-06 47.3 2.0 43 150-192 171-214 (338)
23 3n37_A Ribonucleoside-diphosph 88.1 0.2 6.8E-06 44.6 2.1 40 151-192 163-202 (319)
24 1nfv_A Bacterioferritin; 24 su 87.7 0.5 1.7E-05 37.0 3.9 62 135-196 8-70 (179)
25 1jk0_B RNR Y4, ribonucleoside- 86.9 0.21 7.2E-06 45.1 1.5 44 151-196 191-234 (345)
26 1jk0_A RNR Y2, ribonucleoside- 86.0 1.5 5E-05 41.2 6.7 44 151-196 263-307 (419)
27 4a58_A Ribonucleoside-diphosph 85.7 0.37 1.3E-05 43.3 2.4 44 151-196 181-224 (324)
28 3pf7_A Benzoyl-COA oxygenase c 85.2 0.36 1.2E-05 47.0 2.3 67 126-196 96-165 (481)
29 3fwb_A Cell division control p 84.8 0.99 3.4E-05 32.4 3.9 91 98-191 18-115 (161)
30 4etr_A Putative uncharacterize 84.6 0.75 2.5E-05 36.5 3.5 66 129-196 2-67 (153)
31 1jfj_A Ehcabp, calcium-binding 82.5 5.3 0.00018 27.2 6.7 85 94-181 30-119 (134)
32 2sas_A Sarcoplasmic calcium-bi 82.4 9.9 0.00034 27.6 8.6 75 140-247 107-184 (185)
33 2bl0_B Myosin regulatory light 82.0 2.6 9E-05 29.6 5.2 85 98-191 3-95 (145)
34 2ovk_B RLC, myosin regulatory 82.0 2.2 7.4E-05 30.7 4.8 88 97-191 10-104 (153)
35 3olj_A Ribonucleoside-diphosph 82.0 0.59 2E-05 41.0 2.1 51 142-196 166-216 (286)
36 2r2i_A Guanylyl cyclase-activa 81.8 2.9 9.9E-05 31.7 5.7 64 112-176 98-168 (198)
37 1k94_A Grancalcin; penta-EF-ha 81.2 3 0.0001 30.6 5.4 95 96-196 56-158 (165)
38 3e3r_A Calcyphosin, calcyphosi 81.1 4.7 0.00016 30.3 6.6 71 94-166 67-137 (204)
39 1jfj_A Ehcabp, calcium-binding 80.8 1.2 4.2E-05 30.5 3.0 77 112-191 10-94 (134)
40 2hz8_A De novo designed DIIRON 80.8 0.29 1E-05 39.7 -0.2 66 124-191 18-83 (115)
41 1fpw_A Yeast frequenin, calciu 80.7 3.8 0.00013 30.4 5.9 65 112-177 109-185 (190)
42 3pvt_A Phenylacetic acid degra 80.7 1.2 4.1E-05 40.6 3.7 66 127-196 21-88 (311)
43 1jgc_A Bacterioferritin, BFR; 80.2 1.3 4.4E-05 33.4 3.2 60 137-196 5-65 (161)
44 2ggz_A Guanylyl cyclase-activa 79.8 3.6 0.00012 32.0 5.7 26 150-176 147-172 (211)
45 1g8i_A Frequenin, neuronal cal 79.7 1.8 6.2E-05 32.2 3.8 31 146-177 155-185 (190)
46 2y3q_A Bacterioferritin; metal 79.6 1.4 4.8E-05 33.1 3.2 60 137-196 5-65 (158)
47 4di0_A Rubrerythrin; ssgcid, s 79.5 1.1 3.7E-05 36.1 2.7 57 140-196 84-142 (144)
48 2ehb_A Calcineurin B-like prot 78.6 4 0.00014 31.1 5.6 89 99-191 33-130 (207)
49 2fkz_A Bacterioferritin; ferro 78.5 1.6 5.4E-05 32.5 3.2 60 137-196 5-65 (155)
50 1wdc_B Scallop myosin; calcium 77.9 2.4 8.3E-05 30.6 3.9 54 112-166 97-150 (156)
51 2jnf_A Troponin C; stretch act 77.3 4.7 0.00016 28.9 5.3 89 100-191 10-110 (158)
52 2l2e_A Calcium-binding protein 77.1 3.8 0.00013 30.6 4.9 55 112-166 73-127 (190)
53 1gjy_A Sorcin, CP-22, V19; cal 77.0 4.3 0.00015 29.9 5.2 95 96-196 58-160 (167)
54 1jba_A GCAP-2, protein (guanyl 76.9 5 0.00017 30.6 5.6 31 145-176 155-185 (204)
55 3ox6_A Calcium-binding protein 76.9 2.7 9.1E-05 29.6 3.8 90 99-191 7-107 (153)
56 2l4h_A Calcium and integrin-bi 76.7 5.6 0.00019 31.6 6.1 64 112-176 139-211 (214)
57 2l2e_A Calcium-binding protein 76.4 5.5 0.00019 29.6 5.7 77 98-177 97-185 (190)
58 2znd_A Programmed cell death p 76.2 4.4 0.00015 29.9 5.0 81 112-196 84-164 (172)
59 2ehb_A Calcineurin B-like prot 76.1 7.4 0.00025 29.6 6.4 75 100-177 111-193 (207)
60 3qhb_A Symerythrin, ORF180; fo 75.8 1.2 4.2E-05 37.7 2.1 63 135-197 112-176 (179)
61 3qb9_A Bacterioferritin, BFR; 75.2 2.7 9.2E-05 32.6 3.8 60 137-196 7-67 (174)
62 1y1x_A Leishmania major homolo 75.1 7.7 0.00026 29.6 6.3 79 95-181 58-141 (191)
63 1s6c_A KV4 potassium channel-i 75.0 5.4 0.00018 29.5 5.2 33 144-177 146-178 (183)
64 1juo_A Sorcin; calcium-binding 74.4 3.8 0.00013 31.3 4.4 97 94-196 87-191 (198)
65 1alv_A Calpain, S-camld; calci 74.3 5.5 0.00019 29.5 5.2 95 97-196 64-166 (173)
66 3qrx_A Centrin; calcium-bindin 72.8 3.7 0.00013 29.8 3.8 19 170-191 102-120 (169)
67 2jul_A Calsenilin; EF-hand, ca 72.8 4.8 0.00016 32.5 4.9 99 81-181 110-225 (256)
68 2lmt_A Calmodulin-related prot 72.0 3.9 0.00013 30.0 3.8 77 112-191 20-102 (148)
69 2zfd_A Calcineurin B-like prot 72.0 10 0.00035 29.8 6.5 65 112-177 132-204 (226)
70 4ds7_A Calmodulin, CAM; protei 71.7 3.6 0.00012 28.8 3.5 77 112-191 21-103 (147)
71 2aao_A CDPK, calcium-dependent 71.5 7.6 0.00026 28.0 5.2 70 94-165 57-126 (166)
72 2mys_C Myosin; muscle protein, 71.5 17 0.00057 25.4 6.9 67 94-166 38-113 (149)
73 1y1x_A Leishmania major homolo 71.4 6.2 0.00021 30.2 4.9 97 96-196 79-183 (191)
74 3h4s_E KCBP interacting Ca2+-b 70.5 4 0.00014 30.1 3.6 72 99-172 39-111 (135)
75 1top_A Troponin C; contractIle 69.3 5.2 0.00018 28.6 3.9 90 99-191 16-115 (162)
76 2jjz_A Ionized calcium-binding 69.0 4.5 0.00015 30.5 3.6 80 100-181 50-129 (150)
77 1s1e_A KV channel interacting 69.0 7.2 0.00025 31.1 5.0 103 79-191 36-144 (224)
78 3pwf_A Rubrerythrin; non heme 68.7 2 6.9E-05 35.5 1.8 58 140-197 69-128 (170)
79 3j04_B Myosin regulatory light 68.4 5.3 0.00018 28.1 3.7 54 112-165 86-139 (143)
80 3i5g_B Myosin regulatory light 68.4 9 0.00031 29.1 5.3 19 170-191 86-104 (153)
81 1dtl_A Cardiac troponin C; hel 68.4 6 0.00021 28.3 4.1 77 112-191 28-114 (161)
82 3sjs_A URE3-BP sequence specif 68.4 11 0.00037 30.1 5.9 78 94-179 81-163 (220)
83 2bl0_C Myosin regulatory light 67.8 2.8 9.5E-05 29.6 2.1 42 147-191 51-98 (142)
84 1i11_A Transcription factor SO 67.7 6.6 0.00023 27.6 4.1 20 151-170 9-29 (81)
85 4ds7_A Calmodulin, CAM; protei 67.6 4.9 0.00017 28.1 3.4 92 93-190 40-137 (147)
86 1yuz_A Nigerythrin; rubrythrin 67.3 3.8 0.00013 34.5 3.2 59 140-198 30-89 (202)
87 1w7j_B Myosin light chain 1; m 67.2 3 0.0001 29.7 2.2 77 112-191 20-106 (151)
88 2aao_A CDPK, calcium-dependent 67.0 7.9 0.00027 27.9 4.5 90 99-191 23-118 (166)
89 2zfd_A Calcineurin B-like prot 67.0 8.3 0.00028 30.3 5.0 73 115-191 63-141 (226)
90 1fpw_A Yeast frequenin, calciu 66.5 3.9 0.00014 30.3 2.9 92 96-191 21-118 (190)
91 2mys_C Myosin; muscle protein, 66.3 11 0.00038 26.3 5.0 76 112-191 18-104 (149)
92 1dgu_A Calcium-saturated CIB; 66.1 7.2 0.00025 29.0 4.2 32 143-175 148-179 (183)
93 2vzb_A Putative bacterioferrit 66.1 6.3 0.00021 30.0 4.0 61 136-196 15-76 (170)
94 1j30_A 144AA long hypothetical 65.5 4.4 0.00015 31.3 3.0 58 139-196 81-140 (144)
95 3qrx_A Centrin; calcium-bindin 65.3 5.7 0.00019 28.8 3.5 93 93-190 57-155 (169)
96 3sjs_A URE3-BP sequence specif 65.2 5.2 0.00018 31.9 3.5 90 98-191 46-136 (220)
97 1bjf_A Neurocalcin delta; calc 64.8 12 0.00041 27.7 5.2 30 145-175 154-183 (193)
98 2vxx_A Starvation induced DNA 64.6 8.3 0.00028 31.1 4.6 68 129-196 19-87 (192)
99 1s6c_A KV4 potassium channel-i 64.5 10 0.00034 28.0 4.7 66 98-165 54-119 (183)
100 2ovk_B RLC, myosin regulatory 64.5 5.9 0.0002 28.4 3.4 61 94-165 46-112 (153)
101 3ox6_A Calcium-binding protein 63.8 7.9 0.00027 27.1 3.9 87 94-190 41-143 (153)
102 3uoi_A Bacterioferritin, BFR; 63.7 6.4 0.00022 29.9 3.6 60 137-196 7-67 (161)
103 3dd4_A KV channel-interacting 63.4 9.4 0.00032 30.4 4.7 92 96-191 60-157 (229)
104 2jul_A Calsenilin; EF-hand, ca 62.8 6.5 0.00022 31.8 3.7 92 96-191 87-184 (256)
105 3pm8_A PFCDPK2, calcium-depend 62.7 5.8 0.0002 30.8 3.2 91 98-191 52-148 (197)
106 2be4_A Hypothetical protein LO 62.7 16 0.00055 28.4 5.8 89 98-191 9-123 (272)
107 1s1e_A KV channel interacting 62.2 13 0.00043 29.7 5.2 83 97-181 86-185 (224)
108 1k94_A Grancalcin; penta-EF-ha 62.1 18 0.00062 26.4 5.7 75 96-178 36-115 (165)
109 1wy9_A Allograft inflammatory 61.7 2.8 9.5E-05 31.6 1.2 81 100-182 48-128 (147)
110 3khe_A Calmodulin-like domain 61.3 7.2 0.00025 28.8 3.4 80 100-181 87-169 (191)
111 1jba_A GCAP-2, protein (guanyl 60.8 13 0.00043 28.3 4.8 91 97-191 19-114 (204)
112 2bl0_B Myosin regulatory light 60.6 15 0.00053 25.5 4.9 89 94-190 35-130 (145)
113 2f33_A Calbindin; EF-hand, Ca2 60.3 18 0.00063 27.9 5.7 87 100-191 16-122 (263)
114 2r2i_A Guanylyl cyclase-activa 60.1 18 0.00062 27.3 5.6 87 100-191 52-150 (198)
115 1wdc_C Scallop myosin; calcium 59.7 9.6 0.00033 27.3 3.8 76 112-191 19-103 (156)
116 2ggz_A Guanylyl cyclase-activa 59.6 14 0.00049 28.5 5.0 86 100-190 57-153 (211)
117 3gvy_A Bacterioferritin; iron 58.7 11 0.00036 28.7 4.1 59 138-196 6-65 (161)
118 2opo_A Polcalcin CHE A 3; calc 57.8 23 0.00078 23.3 5.2 71 100-173 11-81 (86)
119 1gjy_A Sorcin, CP-22, V19; cal 57.6 29 0.00099 25.4 6.2 75 96-178 38-117 (167)
120 2obh_A Centrin-2; DNA repair c 56.9 17 0.00057 26.2 4.7 87 94-190 36-133 (143)
121 3khe_A Calmodulin-like domain 56.9 17 0.00059 26.7 4.8 77 112-191 50-142 (191)
122 2mys_B Myosin; muscle protein, 56.3 18 0.00062 26.2 4.8 37 152-191 72-114 (166)
123 2f2o_A Calmodulin fused with c 56.1 33 0.0011 25.0 6.2 71 94-166 41-112 (179)
124 1bjf_A Neurocalcin delta; calc 56.0 24 0.00083 26.1 5.6 64 100-165 63-126 (193)
125 1k9u_A Polcalcin PHL P 7; poll 56.0 4.6 0.00016 26.3 1.4 62 101-165 4-65 (78)
126 3fwb_A Cell division control p 55.8 11 0.00036 26.9 3.4 98 82-190 42-150 (161)
127 2mys_B Myosin; muscle protein, 55.8 21 0.00072 25.8 5.1 33 148-180 105-142 (166)
128 1dtl_A Cardiac troponin C; hel 55.7 23 0.00079 25.2 5.2 86 94-181 49-143 (161)
129 3j04_B Myosin regulatory light 55.4 8 0.00027 27.2 2.7 83 101-191 5-95 (143)
130 3dtp_E RLC, myosin regulatory 55.3 20 0.0007 27.4 5.2 73 112-191 67-145 (196)
131 2f33_A Calbindin; EF-hand, Ca2 55.2 28 0.00095 26.9 6.0 77 112-191 113-210 (263)
132 2i7a_A Calpain 13; calcium-dep 55.0 28 0.00095 27.1 6.0 94 96-196 62-167 (174)
133 3dd4_A KV channel-interacting 54.5 16 0.00055 29.0 4.6 70 112-181 112-198 (229)
134 2d8n_A Recoverin; structural g 54.4 17 0.00059 27.5 4.6 91 97-191 30-126 (207)
135 3dtp_E RLC, myosin regulatory 54.2 15 0.00053 28.1 4.3 82 94-190 87-179 (196)
136 2d8n_A Recoverin; structural g 53.6 7.9 0.00027 29.4 2.6 61 99-166 70-135 (207)
137 2a9u_A Ubiquitin carboxyl-term 53.6 2 6.8E-05 35.3 -0.9 20 218-237 63-82 (144)
138 2f2o_A Calmodulin fused with c 53.4 11 0.00037 27.7 3.2 56 112-167 94-149 (179)
139 3e3r_A Calcyphosin, calcyphosi 53.4 14 0.00048 27.6 3.9 77 112-191 47-128 (204)
140 1wdc_C Scallop myosin; calcium 53.3 13 0.00045 26.5 3.6 13 97-109 63-75 (156)
141 3qhb_A Symerythrin, ORF180; fo 53.3 7.4 0.00025 32.9 2.6 80 112-196 3-84 (179)
142 2xze_A STAM-binding protein; h 53.1 5.3 0.00018 32.3 1.6 20 218-237 61-81 (146)
143 4di0_A Rubrerythrin; ssgcid, s 52.8 9.4 0.00032 30.5 3.0 57 139-195 13-70 (144)
144 1j30_A 144AA long hypothetical 52.4 9.8 0.00034 29.3 3.0 55 139-193 9-64 (144)
145 1g8i_A Frequenin, neuronal cal 52.4 12 0.00042 27.6 3.4 17 148-164 109-125 (190)
146 1djx_A PLC-D1, phosphoinositid 52.3 7.2 0.00025 37.7 2.6 100 82-190 30-139 (624)
147 1s6i_A CDPK, calcium-dependent 51.9 9.9 0.00034 29.2 2.9 81 94-181 40-128 (188)
148 3ll8_B Calcineurin subunit B t 51.6 14 0.00048 26.0 3.5 71 112-191 16-94 (155)
149 2c41_A DPS family DNA-binding 50.9 14 0.00049 28.5 3.7 67 130-196 2-69 (158)
150 3mse_B Calcium-dependent prote 50.6 24 0.00081 26.5 4.8 77 100-183 73-156 (180)
151 2be4_A Hypothetical protein LO 50.6 72 0.0025 24.7 7.7 91 96-191 100-215 (272)
152 2ovk_C Myosin catalytic light 50.1 12 0.00042 26.9 3.0 75 113-191 22-104 (159)
153 2lhi_A Calmodulin, serine/thre 49.9 7.3 0.00025 30.1 1.9 64 98-168 45-114 (176)
154 3r0s_A Acyl-[acyl-carrier-prot 49.5 18 0.00062 30.2 4.4 48 97-146 206-253 (266)
155 3fvb_A Bacterioferritin; niaid 49.1 14 0.00048 29.4 3.5 61 136-196 25-86 (182)
156 3uoi_A Bacterioferritin, BFR; 49.0 17 0.00059 27.4 3.8 58 139-196 85-143 (161)
157 1ggw_A Protein (CDC4P); light 48.9 8.2 0.00028 27.1 1.9 39 150-191 49-95 (140)
158 2lw1_A ABC transporter ATP-bin 48.8 13 0.00044 27.5 3.0 25 64-88 37-61 (89)
159 2jjz_A Ionized calcium-binding 48.7 21 0.00073 26.7 4.3 46 95-142 81-126 (150)
160 1top_A Troponin C; contractIle 47.6 22 0.00076 25.2 4.0 92 94-190 50-150 (162)
161 3u0k_A Rcamp; fluorescent prot 47.6 36 0.0012 32.6 6.5 82 93-181 331-423 (440)
162 2hpk_A Photoprotein berovin; s 47.5 62 0.0021 24.5 6.8 84 96-181 70-174 (208)
163 2qac_A Myosin A tail domain in 47.2 20 0.00069 25.4 3.7 74 94-178 45-129 (146)
164 3r2k_A Bacterioferritin, BFR; 47.1 18 0.00061 27.2 3.6 60 137-196 5-65 (154)
165 1juo_A Sorcin; calcium-binding 46.5 26 0.0009 26.6 4.5 74 97-178 70-148 (198)
166 1c7v_A CAVP, calcium vector pr 46.1 19 0.00066 23.4 3.3 68 98-168 7-75 (81)
167 2pvb_A Protein (parvalbumin); 45.8 39 0.0013 23.0 5.0 82 97-190 6-98 (108)
168 3r2k_A Bacterioferritin, BFR; 45.6 21 0.00073 26.8 3.8 67 140-225 83-151 (154)
169 2ovk_C Myosin catalytic light 44.9 25 0.00085 25.2 4.0 19 112-130 95-113 (159)
170 3fs7_A Parvalbumin, thymic; ca 44.8 36 0.0012 23.2 4.6 85 94-190 4-99 (109)
171 1m45_A MLC1P, myosin light cha 44.8 16 0.00056 25.7 2.9 81 95-181 35-131 (148)
172 2yuk_A Myeloid/lymphoid or mix 44.5 8.5 0.00029 29.3 1.5 32 151-182 27-66 (90)
173 1q80_A SCP, sarcoplasmic calci 44.0 86 0.0029 22.4 8.6 30 217-247 144-173 (174)
174 3pwf_A Rubrerythrin; non heme 44.0 16 0.00056 30.0 3.2 57 140-196 8-65 (170)
175 3k21_A PFCDPK3, calcium-depend 43.7 12 0.0004 28.8 2.2 76 112-191 62-141 (191)
176 2lhi_A Calmodulin, serine/thre 43.5 26 0.0009 27.0 4.2 85 81-168 65-149 (176)
177 3mse_B Calcium-dependent prote 43.2 62 0.0021 24.2 6.1 88 99-191 35-127 (180)
178 2blf_B SORB, sulfite\:cytochro 43.1 39 0.0013 23.9 4.7 35 97-145 45-79 (81)
179 2itb_A TRNA-(MS(2)IO(6)A)-hydr 42.6 42 0.0014 29.5 5.7 94 96-192 65-163 (206)
180 2hpk_A Photoprotein berovin; s 42.3 35 0.0012 25.9 4.6 18 171-191 130-147 (208)
181 1exr_A Calmodulin; high resolu 41.2 26 0.00089 25.0 3.6 87 94-190 40-137 (148)
182 3pm8_A PFCDPK2, calcium-depend 40.8 8.4 0.00029 29.9 0.9 80 100-181 93-179 (197)
183 1rro_A RAT oncomodulin; calciu 40.4 55 0.0019 22.2 5.0 83 96-190 5-98 (108)
184 2bl0_C Myosin regulatory light 40.4 22 0.00076 24.8 3.0 86 94-190 36-132 (142)
185 3cs1_A Flagellar calcium-bindi 40.4 32 0.0011 26.9 4.3 13 96-108 64-76 (219)
186 1wdc_B Scallop myosin; calcium 40.3 22 0.00077 25.4 3.1 38 151-191 63-106 (156)
187 2y3q_A Bacterioferritin; metal 40.3 23 0.0008 26.3 3.3 58 139-196 83-141 (158)
188 2znd_A Programmed cell death p 40.1 19 0.00066 26.4 2.8 78 95-180 39-121 (172)
189 2bec_A Calcineurin B homologou 40.0 19 0.00065 27.3 2.8 84 99-191 25-133 (202)
190 1m45_A MLC1P, myosin light cha 39.9 20 0.00069 25.2 2.7 54 112-165 93-146 (148)
191 1tiz_A Calmodulin-related prot 39.5 21 0.00072 22.0 2.5 20 145-164 44-63 (67)
192 2r80_B Hemoglobin subunit beta 39.4 13 0.00045 28.5 1.8 20 228-255 30-49 (146)
193 3h4s_E KCBP interacting Ca2+-b 39.0 30 0.001 25.4 3.6 35 96-132 73-107 (135)
194 2lmt_A Calmodulin-related prot 39.0 28 0.00096 25.3 3.5 87 94-190 40-137 (148)
195 1c7v_A CAVP, calcium vector pr 38.6 42 0.0014 21.7 4.0 39 95-135 40-78 (81)
196 3ll8_B Calcineurin subunit B t 38.5 99 0.0034 21.6 7.6 17 148-164 85-101 (155)
197 3chh_A P-aminobenzoate N-oxyge 38.3 18 0.00062 32.9 2.8 113 137-254 183-314 (336)
198 2qac_A Myosin A tail domain in 38.2 32 0.0011 24.3 3.6 51 112-164 94-144 (146)
199 1uhk_A Aequorin 2, aequorin; E 38.1 1E+02 0.0035 22.4 6.4 29 217-247 161-189 (191)
200 3nyv_A Calmodulin-domain prote 37.8 47 0.0016 29.0 5.3 81 99-181 381-464 (484)
201 1rwy_A Parvalbumin alpha; EF-h 37.8 37 0.0013 23.1 3.8 76 97-181 6-92 (109)
202 3ee4_A Probable ribonucleoside 37.4 63 0.0022 28.8 6.2 98 126-235 53-160 (323)
203 3qb9_A Bacterioferritin, BFR; 37.4 22 0.00076 27.3 2.9 58 140-197 86-144 (174)
204 1qls_A S100C protein, calgizza 37.2 39 0.0013 22.8 3.8 29 98-128 54-82 (99)
205 1alv_A Calpain, S-camld; calci 36.9 18 0.00062 26.7 2.2 13 152-164 91-103 (173)
206 1nfv_A Bacterioferritin; 24 su 36.9 28 0.00096 27.0 3.4 58 139-196 88-146 (179)
207 2opo_A Polcalcin CHE A 3; calc 36.7 56 0.0019 21.3 4.4 36 96-133 42-77 (86)
208 1s6i_A CDPK, calcium-dependent 36.0 24 0.00082 27.1 2.8 44 145-191 53-101 (188)
209 2kz2_A Calmodulin, CAM; TR2C, 35.9 36 0.0012 23.6 3.5 15 150-164 77-91 (94)
210 2lvv_A Flagellar calcium-bindi 35.3 25 0.00085 27.8 2.9 70 112-181 107-182 (226)
211 3bow_A Calpain-2 catalytic sub 35.3 52 0.0018 31.8 5.7 92 81-182 549-653 (714)
212 2ccm_A Calexcitin; EF hand, ca 35.1 27 0.00093 25.9 2.9 75 169-247 109-189 (191)
213 1qv0_A Obelin, OBL; photoprote 35.1 1.3E+02 0.0045 22.0 6.9 63 101-165 67-140 (195)
214 2ccm_A Calexcitin; EF hand, ca 34.9 1.3E+02 0.0046 22.0 9.6 78 111-191 73-162 (191)
215 1uhk_A Aequorin 2, aequorin; E 34.7 58 0.002 23.7 4.6 86 101-191 17-128 (191)
216 1pva_A Parvalbumin; calcium bi 34.5 69 0.0024 21.7 4.8 83 96-190 6-99 (110)
217 1bu3_A Calcium-binding protein 34.4 46 0.0016 22.7 3.8 85 94-190 4-99 (109)
218 2d58_A Allograft inflammatory 34.4 31 0.0011 24.0 3.0 63 112-174 42-105 (107)
219 1exr_A Calmodulin; high resolu 34.2 1.1E+02 0.0038 21.6 6.0 19 169-190 83-101 (148)
220 3q5i_A Protein kinase; CDPK, m 34.0 47 0.0016 29.4 4.8 75 100-181 399-481 (504)
221 2qqy_A Sigma B operon; dodecam 33.9 32 0.0011 25.2 3.1 56 140-195 87-143 (149)
222 1ggw_A Protein (CDC4P); light 33.6 58 0.002 22.6 4.3 73 95-178 36-121 (140)
223 2ktg_A Calmodulin, putative; e 33.6 51 0.0017 21.4 3.8 65 100-164 11-76 (85)
224 4am5_A Bacterioferritin; metal 33.5 33 0.0011 26.4 3.3 59 138-196 6-65 (159)
225 2jnf_A Troponin C; stretch act 33.4 22 0.00075 25.3 2.1 75 90-181 60-139 (158)
226 3sg6_A Gcamp2, myosin light ch 33.2 52 0.0018 30.9 5.1 75 100-181 348-433 (450)
227 1wy9_A Allograft inflammatory 33.0 28 0.00096 26.0 2.7 31 97-129 81-111 (147)
228 1cg5_A Protein (hemoglobin); o 32.4 19 0.00067 27.5 1.8 38 227-272 30-75 (141)
229 5pal_A Parvalbumin; calcium-bi 32.2 43 0.0015 22.8 3.4 83 96-190 5-98 (109)
230 1utg_A Uteroglobin; steroid bi 31.4 39 0.0013 24.3 3.1 48 98-149 17-66 (70)
231 2a9g_A Arginine deiminase; arg 31.3 62 0.0021 29.5 5.2 70 92-167 45-114 (418)
232 1nya_A Calerythrin; EF-hand, m 30.6 70 0.0024 22.9 4.4 76 104-181 62-148 (176)
233 1nya_A Calerythrin; EF-hand, m 30.5 45 0.0016 23.9 3.4 86 101-191 8-121 (176)
234 1hlm_A Hemoglobin (cyano Met); 30.4 30 0.001 26.5 2.5 20 228-255 42-61 (159)
235 2obh_A Centrin-2; DNA repair c 30.3 49 0.0017 23.7 3.6 62 101-164 80-141 (143)
236 1jgc_A Bacterioferritin, BFR; 30.0 39 0.0013 25.2 3.1 58 139-196 83-141 (161)
237 3a4u_B Multiple coagulation fa 29.9 56 0.0019 24.4 4.0 61 99-161 67-139 (143)
238 1sct_A Hemoglobin II (carbonmo 29.9 25 0.00085 26.9 2.0 35 228-270 40-84 (150)
239 2i7a_A Calpain 13; calcium-dep 29.8 67 0.0023 24.9 4.5 63 96-167 42-104 (174)
240 3i5g_B Myosin regulatory light 29.3 71 0.0024 24.0 4.5 18 148-165 95-112 (153)
241 2joj_A Centrin protein; N-term 28.9 56 0.0019 20.7 3.3 53 112-164 17-69 (77)
242 2dc3_A Cytoglobin; myoglobin, 28.7 24 0.00081 28.7 1.8 36 228-271 51-99 (193)
243 3fs7_A Parvalbumin, thymic; ca 28.6 1.4E+02 0.0047 20.2 5.8 65 98-164 40-107 (109)
244 1ash_A Hemoglobin (OXY); oxyge 28.5 33 0.0011 27.7 2.6 40 225-272 29-81 (150)
245 3li6_A Calcium-binding protein 27.9 45 0.0015 20.5 2.6 22 143-164 41-62 (66)
246 1lko_A Rubrerythrin all-iron(I 27.8 41 0.0014 27.7 3.1 55 139-193 9-64 (191)
247 1krq_A Ferritin; H-chain like 27.7 53 0.0018 25.8 3.6 108 138-251 5-123 (167)
248 1ccd_A Clara cell 17 KD protei 27.2 46 0.0016 24.4 3.0 46 98-147 19-66 (77)
249 2rcc_A Ribonucleoside-diphosph 27.2 70 0.0024 28.4 4.7 63 126-191 65-128 (346)
250 1wlz_A DJBP, CAP-binding prote 27.1 48 0.0016 22.6 2.9 65 99-165 23-87 (105)
251 3fvb_A Bacterioferritin; niaid 27.1 53 0.0018 26.0 3.5 58 139-196 104-162 (182)
252 1bu3_A Calcium-binding protein 26.9 1.2E+02 0.0042 20.5 5.0 79 81-164 26-107 (109)
253 3n37_A Ribonucleoside-diphosph 26.7 73 0.0025 28.2 4.7 65 125-191 42-107 (319)
254 3mjo_A Ribonucleotide reductas 26.7 71 0.0024 28.0 4.6 65 125-191 51-116 (296)
255 1qv0_A Obelin, OBL; photoprote 26.5 1.8E+02 0.0061 21.3 6.1 16 173-191 117-132 (195)
256 3gvy_A Bacterioferritin; iron 26.2 40 0.0014 25.4 2.6 58 139-196 83-141 (161)
257 2bec_A Calcineurin B homologou 26.2 1.2E+02 0.0039 22.9 5.1 28 82-109 63-90 (202)
258 4a3n_A Transcription factor SO 26.1 44 0.0015 22.3 2.5 20 151-170 7-27 (71)
259 2fkz_A Bacterioferritin; ferro 25.8 58 0.002 23.9 3.3 58 139-196 83-141 (155)
260 2kn2_A Calmodulin; S MAPK phos 24.8 99 0.0034 20.3 4.1 53 112-164 19-71 (92)
261 1sct_B Hemoglobin II (carbonmo 24.8 17 0.00057 27.8 0.2 36 228-271 41-86 (151)
262 3dhz_A Ribonucleotide reductas 24.6 70 0.0024 28.5 4.2 65 125-191 52-117 (329)
263 2vzb_A Putative bacterioferrit 24.3 67 0.0023 24.2 3.5 58 139-196 103-160 (170)
264 1syy_A Ribonucleoside-diphosph 23.8 80 0.0028 28.1 4.4 64 126-191 63-129 (346)
265 2b1u_A Calmodulin-like protein 23.8 32 0.0011 21.4 1.4 17 112-128 16-32 (71)
266 2lhb_A Hemoglobin V (cyano Met 23.4 42 0.0014 25.6 2.2 20 228-255 40-59 (149)
267 1gcv_B Hemoglobin; oxygen stor 23.2 36 0.0012 26.2 1.8 37 227-271 29-68 (136)
268 1yhu_C Hemoglobin B1A chain; g 23.2 44 0.0015 25.6 2.3 34 228-269 39-80 (148)
269 1yuz_A Nigerythrin; rubrythrin 22.9 51 0.0017 27.6 2.8 59 141-199 106-166 (202)
270 2w72_B Human hemoglobin A; iro 22.7 38 0.0013 25.8 1.9 20 228-255 30-49 (146)
271 2h5n_A Hypothetical protein PG 22.6 1.9E+02 0.0065 22.2 5.9 47 96-149 51-97 (133)
272 2sas_A Sarcoplasmic calcium-bi 22.6 65 0.0022 23.1 3.0 45 144-191 66-124 (185)
273 1xq5_A Hemoglobin alpha-1 chai 22.6 37 0.0013 25.9 1.8 36 228-271 32-75 (143)
274 1utr_A Uteroglobin; clara cell 22.4 63 0.0022 24.4 3.0 28 122-149 60-87 (96)
275 1yqf_A Hypothetical protein LM 22.3 43 0.0015 28.0 2.2 28 128-155 151-179 (203)
276 1w7j_B Myosin light chain 1; m 22.3 84 0.0029 22.0 3.5 39 148-190 97-140 (151)
277 4a64_A Cullin-4B, CUL4B, CUL-4 21.9 1.2E+02 0.004 26.7 5.0 60 123-182 221-281 (354)
278 3lij_A Calcium/calmodulin depe 21.7 1.2E+02 0.0041 26.7 5.1 76 99-181 389-472 (494)
279 4e6u_A Acyl-[acyl-carrier-prot 21.7 53 0.0018 27.1 2.7 45 97-146 209-259 (265)
280 3olj_A Ribonucleoside-diphosph 21.6 87 0.003 27.3 4.1 62 126-190 50-113 (286)
281 2o1z_A Ribonucleotide reductas 21.0 94 0.0032 27.5 4.2 64 126-191 74-138 (311)
282 2c0k_A Hemoglobin; oxygen tran 20.8 45 0.0015 25.6 1.9 20 228-255 30-49 (151)
283 2o8x_A Probable RNA polymerase 20.8 67 0.0023 20.6 2.5 36 123-166 8-43 (70)
284 1hlb_A Hemoglobin (deoxy); oxy 20.6 31 0.0011 26.4 1.0 20 228-255 42-61 (158)
285 1lhs_A Myoglobin; oxygen stora 20.5 29 0.00098 26.8 0.8 19 228-254 31-49 (153)
286 1n1q_A DPS protein; four-helix 20.5 1.2E+02 0.0041 22.8 4.3 65 132-196 2-67 (149)
287 3hug_A RNA polymerase sigma fa 20.3 1E+02 0.0035 21.5 3.6 36 123-166 30-65 (92)
288 3rm1_A Protein S100-B; alpha-h 20.2 49 0.0017 23.0 1.8 29 96-126 48-76 (92)
No 1
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=96.76 E-value=0.00075 Score=53.30 Aligned_cols=51 Identities=22% Similarity=0.200 Sum_probs=47.8
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECAS 192 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNka 192 (272)
+.+.|...+..|-.|.-.|+.++. . +||.++++|..||.+|.+|+.+|.+-
T Consensus 15 ~~e~L~~Ai~~E~~~~~~Y~~lA~-~--~~~~~k~lF~~LA~eE~~H~~~l~~l 65 (157)
T 1vjx_A 15 VSDILTVAIRLEEEGERFYRELSE-H--FNGEIKKTFLELADQERIHAEIFRKM 65 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-S--CCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567888999999999999999999 5 89999999999999999999999885
No 2
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=96.47 E-value=0.0017 Score=51.49 Aligned_cols=56 Identities=21% Similarity=0.291 Sum_probs=51.6
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
..+.|......|-.+.-.|..++++. +||.++++|..+|.+|.+|+..+.+-+..+
T Consensus 21 ~~e~L~~A~~~E~~a~~~Y~~~A~~~--~~~~~~~~f~~lA~~E~~H~~~l~~~~~~l 76 (175)
T 2fzf_A 21 LEELLGMAIKAEIGAREFYKSLAEKI--KIEALKEKINWLAEEEKKHEALLRKLYSQM 76 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC--CCTTHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57889999999999999999999998 679999999999999999999999877654
No 3
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=96.31 E-value=0.0024 Score=50.59 Aligned_cols=57 Identities=23% Similarity=0.217 Sum_probs=50.1
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSV 195 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~D 195 (272)
..|.|...+..|-.|.-.|..+++.+++ .||.++++|..||.||.+|+.+|-+-...
T Consensus 6 ~~e~L~~Ai~~E~~~~~~Y~~lA~~~~~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~ 63 (167)
T 2oh3_A 6 LAEFLAHAIALETEAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRA 63 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6788999999999999999999995554 49999999999999999999998775443
No 4
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=94.72 E-value=0.015 Score=45.84 Aligned_cols=69 Identities=14% Similarity=0.120 Sum_probs=58.8
Q ss_pred HHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 124 FKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 124 F~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+.+..++|++++|.. .-..+|..+|.-+.=+|..+.... +||.++.++.-++.+|..|+|-+-+-|...
T Consensus 6 ~he~~~~ls~~~~d~--~rai~aL~~EleAI~~Y~q~A~~t--~D~evk~vl~~iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 6 YFEPTQELSDETRDM--HRAIISLREELEAVDLYNQRVNAC--KDKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp CCSCGGGSCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHcCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334567888888874 335569999999999999999988 899999999999999999999988887766
No 5
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=92.99 E-value=0.032 Score=49.34 Aligned_cols=43 Identities=33% Similarity=0.367 Sum_probs=34.3
Q ss_pred chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhh
Q 024138 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSV 195 (272)
Q Consensus 151 FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~D 195 (272)
+|||...--+++|- .=|-++++..+.+|||+.|..|...-...
T Consensus 172 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~l~~~ 214 (296)
T 3mjo_A 172 YSGFYLPMYLSSRA--KLTNTADIIRLIIRDESVHGYYIGYKYQQ 214 (296)
T ss_dssp HHHTHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38887777888874 67999999999999999999875543333
No 6
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=92.82 E-value=0.035 Score=49.78 Aligned_cols=42 Identities=33% Similarity=0.388 Sum_probs=34.0
Q ss_pred chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhh
Q 024138 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKS 194 (272)
Q Consensus 151 FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~ 194 (272)
+|||...--+++|- .=|-++++..+.+|||+.|..|...-..
T Consensus 173 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~l~~ 214 (329)
T 3dhz_A 173 YSGFYLPMYLSSRA--KLTNTADIIRLIIRDESVHGYYIGYKYQ 214 (329)
T ss_dssp HHHHHHHHHHHTTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38888877888864 6799999999999999999987554333
No 7
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=92.47 E-value=0.093 Score=46.94 Aligned_cols=57 Identities=21% Similarity=0.304 Sum_probs=43.8
Q ss_pred HHHHHHHhhhhcc----chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 138 IFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 138 ~FveFLerScTAE----FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
.|.+=|+-++.-| +|||...--+++|- .-|-++++..+.+|||++|..|...-++.+
T Consensus 174 ~~~~~lva~~~lEgi~FysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l 234 (346)
T 2rcc_A 174 TFLESIVYDVILEGLNFYSGFAFFYNLARNQ--KMVSTSTMINYINRDEQLHVYLFTNIFKEL 234 (346)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CchhHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4444444455555 58988877888875 679999999999999999998877666655
No 8
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=92.27 E-value=0.13 Score=46.08 Aligned_cols=59 Identities=24% Similarity=0.293 Sum_probs=43.9
Q ss_pred HHHHHHHHHhh-hhcc----chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 136 RQIFVEFLERS-CTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 136 R~~FveFLerS-cTAE----FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
.+.|..=|+-+ +.-| +|||...--+++|- .-|-++++..+.+|||++|..|.-.-++.+
T Consensus 178 ~~~~~~~lva~~~~lEGi~FysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~~ 241 (346)
T 1syy_A 178 LQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQN--KMIGIGEQYQYILRDETIHLNFGIDLINGI 241 (346)
T ss_dssp HHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555544 4444 48888877788775 789999999999999999998876655554
No 9
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=92.03 E-value=0.081 Score=41.86 Aligned_cols=67 Identities=15% Similarity=0.113 Sum_probs=56.0
Q ss_pred HHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 126 EAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 126 ~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+..++|++++|..= -+.+|..+|..-.-+|.....-. +||.+++++.-.+.||-+|+|-+=.-|...
T Consensus 8 ep~e~Ls~e~~d~~--Rai~sl~~EleAI~~Y~q~a~~~--~d~~~k~vl~~i~~EEkeH~g~~lelLrr~ 74 (95)
T 3k6c_A 8 EPTQELSDETRDMH--RAIISLREELEAVDLYNQRVNAC--KDKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp SCGGGSCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHhcCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34578888887642 23469999999999999999988 899999999999999999999876666554
No 10
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=91.98 E-value=0.11 Score=40.87 Aligned_cols=54 Identities=22% Similarity=0.234 Sum_probs=48.0
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKS 194 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~ 194 (272)
..+-|.-....|-....+|+++.+++ .+|.++++|..++.||..|...|-+-+.
T Consensus 101 ~~~~l~~ai~~E~~a~~~Y~~~a~~~--~d~~~k~l~~~la~eE~~H~~~l~~~~~ 154 (157)
T 1vjx_A 101 LKEVLDIAISVEKDSIILYYELKDGL--VNSDAQKTVKKIIDQEKEHLRKLLEMKR 154 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56677888889999999999999999 7899999999999999999998876554
No 11
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=91.94 E-value=0.13 Score=46.67 Aligned_cols=61 Identities=21% Similarity=0.174 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhhhhcc----chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 134 PLRQIFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 134 ~~R~~FveFLerScTAE----FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+.++.|+.-|+-+..-| +|||...--+++|- .=|-++++..+.+|||+.|..|...-++.+
T Consensus 188 ~~~~~~~~~lva~~~lEgi~FysgF~~~~~l~~~g--~m~G~~~~i~lI~RDE~lH~~~~~~l~~~l 252 (375)
T 1mxr_A 188 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERE--LMEGNAKIIRLIARDEALHLTGTQHMLNLL 252 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666665555 68887766788885 789999999999999999998866554444
No 12
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=91.85 E-value=0.03 Score=51.54 Aligned_cols=52 Identities=25% Similarity=0.411 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhc-chhh
Q 024138 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAG-YECA 191 (272)
Q Consensus 138 ~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAG-FlNk 191 (272)
+.++-|.-+..+|..|.=+|.++.... +||.++++|..++.||-+|+| |++-
T Consensus 19 el~~air~ai~~E~eAi~~Y~q~A~~~--~d~~~K~vl~~ia~EEk~H~~~f~~l 71 (345)
T 2e0z_A 19 ELMEILRLAIIAELDAINLYEQMARYS--EDENVRKILLDVAREEKAHVGEFMAL 71 (345)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467778889999999999999999998 899999999999999999999 5543
No 13
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=91.64 E-value=0.077 Score=47.32 Aligned_cols=44 Identities=20% Similarity=0.218 Sum_probs=36.9
Q ss_pred chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 151 FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+|||...--+++|- .-|-++++..+.+|||++|..|...-++.+
T Consensus 196 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l 239 (311)
T 2o1z_A 196 SGSFCAIFWFKKQN--KLHGLTFSNELISRDEGLHTDFNCLIYSLL 239 (311)
T ss_dssp HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48887777788875 779999999999999999998887766655
No 14
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=91.47 E-value=0.13 Score=40.58 Aligned_cols=63 Identities=11% Similarity=0.118 Sum_probs=52.4
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhhhhcccccC
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVMYVKYTFFK 204 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df~rkYTfF~ 204 (272)
..+-|.-..-.|-...-+|+++.... .+|.++++|.-+++||.+|.-.+-+-+..+.+- ++|.
T Consensus 106 ~~~~L~~ai~~E~~a~~~Y~~~a~~~--~d~~~r~l~~~ia~eE~~H~~~l~~~l~~l~~~-~~~~ 168 (175)
T 2fzf_A 106 IIDLIRWAMKAEEIAAEFYLKLEEMV--KEEEKKRLMRYLADMERGHYYTLRAEYELLLNW-EMYS 168 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHH
Confidence 56778888889999999999999998 579999999999999999999888777665432 5554
No 15
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=91.13 E-value=0.08 Score=47.69 Aligned_cols=41 Identities=24% Similarity=0.511 Sum_probs=34.2
Q ss_pred ccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhh
Q 024138 149 AEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 149 AEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
-|-.-.+.|.-+++.. ..|+|++|....|+||+||.+|--+
T Consensus 158 qE~aT~v~y~n~a~~~--~dPvL~~i~~~IA~DE~RH~~~y~~ 198 (275)
T 1za0_A 158 YERCGAVFCRNLAAQI--EEPILAGLIDRIARDEVRHEEFFAN 198 (275)
T ss_dssp HHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555578899999765 7999999999999999999988544
No 16
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=91.12 E-value=0.15 Score=40.16 Aligned_cols=54 Identities=20% Similarity=0.141 Sum_probs=47.4
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKS 194 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~ 194 (272)
..+-|.-..-.|-.|.-.|+++..+. .+|.++++|.-+++||.+|...|-+-+.
T Consensus 94 ~~~~l~~A~~~E~~a~~fY~~~a~~~--~d~~~k~~~~~la~eE~~H~~~l~~~~~ 147 (167)
T 2oh3_A 94 PYHALRYARDNEIRGMEYYKEAAANS--ADPEVKRLGADFAAEEAEHVVALDKWIE 147 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788889999999999999998 7899999999999999999998876443
No 17
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.93 E-value=0.22 Score=45.21 Aligned_cols=58 Identities=26% Similarity=0.206 Sum_probs=42.9
Q ss_pred cCChHHHHHHHHHHHhhhhcc----chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcch
Q 024138 130 KMQGPLRQIFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYE 189 (272)
Q Consensus 130 ~l~~~~R~~FveFLerScTAE----FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFl 189 (272)
..+.+.++.|..=|+-++.-| +|||...--+++|- .=|-++++..+.+|||+.|..|.
T Consensus 165 ~~~~~~~~~~~~~lva~~~lEGi~FysgF~~~~~l~~~g--~m~G~~~~i~~I~RDE~lH~~f~ 226 (350)
T 4dr0_A 165 AIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQG--KLMQSGEIINLILRDEAIHGVYV 226 (350)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTT--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHH
Confidence 333334555666665565555 57887777788765 77999999999999999999874
No 18
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=90.61 E-value=0.47 Score=43.92 Aligned_cols=44 Identities=25% Similarity=0.245 Sum_probs=37.0
Q ss_pred chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 151 FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+|||...--+++|- .-|-++++..+.+|||++|..|...-++.+
T Consensus 238 ys~F~~~~~l~~rg--~MpG~~~~i~lI~RDE~lH~~f~~~l~~~l 281 (390)
T 1h0o_A 238 SGSFASIFWLKKRG--LMPGLTFSNELISRDEGLHCDFACLMFKHL 281 (390)
T ss_dssp HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68888777788875 779999999999999999998877666555
No 19
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=90.56 E-value=0.1 Score=46.84 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=35.3
Q ss_pred chhh-HHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhhhh
Q 024138 151 FSGF-LLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVMYV 198 (272)
Q Consensus 151 FSGf-LLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df~r 198 (272)
+||| ..+.=+++|- .=|-++++..+.+|||++|..|...-++.+.+
T Consensus 181 ysgF~~~~~~l~~rg--~m~G~~~~i~lI~RDE~~H~~f~~~l~~~l~~ 227 (323)
T 3ee4_A 181 LTGYYAWHKICVERA--ILPGMQELVRRIGDDERRHMAWGTFTCRRHVA 227 (323)
T ss_dssp HHHHHHHHHHHTTTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5777 3444577764 67999999999999999999998776665533
No 20
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=90.22 E-value=0.13 Score=46.52 Aligned_cols=44 Identities=20% Similarity=0.218 Sum_probs=36.7
Q ss_pred chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 151 FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+|||...--+++|- .-|-++++..+.+|||++|..|...-++.+
T Consensus 197 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l 240 (349)
T 2p1i_A 197 SGSFCAIFWFKKQN--KLHGLTFSNELISRDEGLHTDFNCLIYSLL 240 (349)
T ss_dssp HHHHHHHHHHHTTT--CSTTHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58888777788875 779999999999999999998877666554
No 21
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=89.12 E-value=0.41 Score=35.50 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-ccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 135 LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 135 ~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-P~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
.++..++-|..-...|+.+...|.-....+++.+ |.+++.|.-.+.+|..||--+-+-+.+.
T Consensus 7 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~l 69 (149)
T 2qqy_A 7 DVKELIEGLNEDLAGEYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKTL 69 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4567899999999999999999999999996544 6799999999999999999887766665
No 22
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=88.97 E-value=0.15 Score=47.31 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=33.5
Q ss_pred cchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhh
Q 024138 150 EFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECAS 192 (272)
Q Consensus 150 EFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNka 192 (272)
|-.-++.|.-++|.-+.. .|+|++|....|+||+||.+|--+-
T Consensus 171 E~AT~vsh~n~~r~A~~~gdPvLa~i~~~IA~DE~RH~~~Y~~~ 214 (338)
T 2uw1_A 171 ERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKI 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444466777777765544 9999999999999999999985553
No 23
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=88.12 E-value=0.2 Score=44.65 Aligned_cols=40 Identities=33% Similarity=0.375 Sum_probs=33.4
Q ss_pred chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhh
Q 024138 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECAS 192 (272)
Q Consensus 151 FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNka 192 (272)
+|||...--+++|- .=|-++++..+.+|||+.|..|...-
T Consensus 163 ys~F~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l 202 (319)
T 3n37_A 163 YSGFWLPMYFSSRG--KLTNTADLIRLIIRDEAVHGYYIGYK 202 (319)
T ss_dssp HHHHHHHHHHHHTT--CSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CchhHHHHHHHHHHhHHHHHHHHHHH
Confidence 38888888888874 67999999999999999998775443
No 24
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=87.72 E-value=0.5 Score=37.03 Aligned_cols=62 Identities=19% Similarity=0.210 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 135 LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 135 ~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-+...++.|..-+..|+.+...|.-++..+++. .|.+++.|.-++.+|..||--|-+-+.++
T Consensus 8 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~l 70 (179)
T 1nfv_A 8 RKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKEL 70 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 345678999999999999999999999999764 38999999999999999998877776665
No 25
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=86.90 E-value=0.21 Score=45.13 Aligned_cols=44 Identities=14% Similarity=0.117 Sum_probs=35.7
Q ss_pred chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 151 FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+|||...--+++|- .=|-++++..+.+|||+.|..|...-.+.+
T Consensus 191 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l 234 (345)
T 1jk0_B 191 AGNYASMFWLTDKK--IMPGLAMANRNICRDRGAYTDFSCLLFAHL 234 (345)
T ss_dssp HHHHHHHHHHTSSS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 48888777788875 789999999999999999998766554444
No 26
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=85.96 E-value=1.5 Score=41.21 Aligned_cols=44 Identities=27% Similarity=0.325 Sum_probs=33.5
Q ss_pred ch-hhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 151 FS-GFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 151 FS-GfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
|+ ||...--+++|- .-|-++++..+.+|||++|..|...-++.+
T Consensus 263 fsg~Fa~~~~l~~rg--~MpG~~~~i~lI~RDE~lH~~f~~~l~~~l 307 (419)
T 1jk0_A 263 FSGSFASIFWLKKRG--MMPGLTFSNELICRDEGLHTDFACLLFAHL 307 (419)
T ss_dssp THHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45 555344677764 679999999999999999998876655544
No 27
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=85.66 E-value=0.37 Score=43.26 Aligned_cols=44 Identities=25% Similarity=0.162 Sum_probs=35.0
Q ss_pred chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 151 FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+|||...--+++|- .=|-++++..+.+|||+.|..|...-.+.+
T Consensus 181 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l 224 (324)
T 4a58_A 181 ISSFYSIALLRVRG--LMPGICLANNYISRDELLHTRAASLLYNSM 224 (324)
T ss_dssp HHHHHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57887666788765 779999999999999999998766544444
No 28
>3pf7_A Benzoyl-COA oxygenase component B; DIIRON center, epoxidase, benzoyl coenzyme A, oxidoreductase; 1.90A {Azoarcus evansii} PDB: 3per_A 3pm5_A* 3q1g_A
Probab=85.16 E-value=0.36 Score=47.03 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=56.8
Q ss_pred HHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhc--cchhhhhc-chhhhhhhh
Q 024138 126 EAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS--RDEARHAG-YECASKSVM 196 (272)
Q Consensus 126 ~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMs--RDEARHAG-FlNkal~Df 196 (272)
.+|+.||++-|+..+.-+...+-+|..|..-+..+..+- |-|.+.-.+++ -||+||+- .+--+..+|
T Consensus 96 ~~WqemP~eYR~~LiRlI~~haDSEiagve~e~~wi~~A----PSL~~k~~L~aiVqDE~gHg~~mlyllae~f 165 (481)
T 3pf7_A 96 DVWQEVPGEYRSTLRRIIVTQGDTEPASVEQQRHLGLTA----PSLYDLRNLFQVNVEEGRHLWAMVYLLHAHF 165 (481)
T ss_dssp BCBSSCCGGGHHHHHHHHHHHHHHHHHHHHHHTTGGGGC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cchhhCCHHHHHHHHHHHHHHhhhHHhhchhhhhHHhcC----CCHHHHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 378999999999999999999999999999999988887 99988766665 49999995 455544665
No 29
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=84.85 E-value=0.99 Score=32.35 Aligned_cols=91 Identities=18% Similarity=0.201 Sum_probs=47.6
Q ss_pred cHHHHHHHHHHHhh-ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc------Ccc
Q 024138 98 NQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPV 170 (272)
Q Consensus 98 ~~~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~------NP~ 170 (272)
.+++.+.+.+-|+. |.|+.-++--+||...+..+....-..-++-|.+.+-..=+|.|-|.|...-+... -..
T Consensus 18 ~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 97 (161)
T 3fwb_A 18 LEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDE 97 (161)
T ss_dssp CHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHH
Confidence 33444444444432 66666666666666655544322222234444455555556666666654433221 235
Q ss_pred HHHHHhhhccchhhhhcchhh
Q 024138 171 VAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 171 lae~F~lMsRDEARHAGFlNk 191 (272)
+.++|..+-+| +-|+|+.
T Consensus 98 ~~~~F~~~D~d---~~G~i~~ 115 (161)
T 3fwb_A 98 IKRAFQLFDDD---HTGKISI 115 (161)
T ss_dssp HHHHHHHHCTT---CSSEECH
T ss_pred HHHHHHHHcCC---CCCeEeH
Confidence 67777777555 5677664
No 30
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=84.65 E-value=0.75 Score=36.52 Aligned_cols=66 Identities=15% Similarity=0.038 Sum_probs=55.6
Q ss_pred hcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 129 d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+||.-+..+..|+=|-.-+..+..|..-|+....++ .+|.|+.+|.-|+-+..+|+.=|..-+..+
T Consensus 2 ~~~~~~~~~~~i~~Ln~Li~~~~D~~~gY~~aae~~--~d~~lk~~f~~~a~~~~~~~~eL~~~i~~l 67 (153)
T 4etr_A 2 SHMNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDL--RDPQLKAAMLEQSRDCAAAADELERIVLEL 67 (153)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhHhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 466667778899999999999999999999999999 899999999999999999999988877666
No 31
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=82.46 E-value=5.3 Score=27.22 Aligned_cols=85 Identities=15% Similarity=0.100 Sum_probs=55.3
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHh----cCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCc
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD----KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNP 169 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d----~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP 169 (272)
...+.+++++.+++.+ |.|..-.+--+||...+. ...+...+. +.-+-+.+-..=+|.|-+.|+.+-++..++
T Consensus 30 ~~~~~~~~~~~~~~~~--D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~-~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~ 106 (134)
T 1jfj_A 30 RAIKNEQLLQLIFKSI--DADGNGEIDQNEFAKFYGSIQGQDLSDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI 106 (134)
T ss_dssp CCSSHHHHHHHHHHHH--CSSCCSEEEHHHHHHHTTCSSCCSSHHHHHH-HHHHHHHHCCSSSSEEEHHHHHHHHTTTTC
T ss_pred CCCCCHHHHHHHHHHH--cCCCCCeEcHHHHHHHHHHhcccccCCCHHH-HHHHHHHHCCCCCCccCHHHHHHHHHHhCH
Confidence 4455677888888776 555555677778877774 222222222 444555666677899999999888865433
Q ss_pred c-HHHHHhhhccc
Q 024138 170 V-VAEIFSLMSRD 181 (272)
Q Consensus 170 ~-lae~F~lMsRD 181 (272)
. +.++|..+..|
T Consensus 107 ~~~~~~~~~~D~~ 119 (134)
T 1jfj_A 107 EKVAEQVMKADAN 119 (134)
T ss_dssp HHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCC
Confidence 2 77788877665
No 32
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=82.42 E-value=9.9 Score=27.57 Aligned_cols=75 Identities=17% Similarity=0.285 Sum_probs=46.2
Q ss_pred HHHHHhhhhccchhhHHHHHHhhhhhcc---CccHHHHHhhhccchhhhhcchhhhhhhhhhcccccCceeeeeehhccc
Q 024138 140 VEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLMSRDEARHAGYECASKSVMYVKYTFFKPKFIFYATYLSE 216 (272)
Q Consensus 140 veFLerScTAEFSGfLLYKEl~rrlk~~---NP~lae~F~lMsRDEARHAGFlNkal~Df~rkYTfF~PKfIfYATYLSE 216 (272)
+.-+-+.+-..=+|.|-+.|+.+=++.- ...+.++|..+-.| +-|
T Consensus 107 ~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d---~dG----------------------------- 154 (185)
T 2sas_A 107 IPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDG---GKV----------------------------- 154 (185)
T ss_dssp HHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTT---TTS-----------------------------
T ss_pred HHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcCC---CCC-----------------------------
Confidence 3333344455567788888777766433 34566666665544 223
Q ss_pred ccchhHHHHHHhHHhhCCCCCCCCCcccccc
Q 024138 217 KIGYWRYITIYRHLKANPDSSMTGRQSCGPD 247 (272)
Q Consensus 217 KIGYwRYItIyRHLe~nPe~r~~~~~~~~PI 247 (272)
+|.|--++.+++..-..++ ...|...+.|+
T Consensus 155 ~i~~~ef~~~~~~~~~s~~-~~~~~~~~g~~ 184 (185)
T 2sas_A 155 TFDLNRYKELYYRLLTSPA-ADAGNTLMGQK 184 (185)
T ss_dssp CCSHHHHHHHHHHHHHCSS-CSGGGGGGTCC
T ss_pred cCcHHHHHHHHHHHhcCCC-CCCcccccccC
Confidence 5677778888887777777 65666555554
No 33
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=82.02 E-value=2.6 Score=29.56 Aligned_cols=85 Identities=11% Similarity=0.070 Sum_probs=47.9
Q ss_pred cHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChH-HHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-------c
Q 024138 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-------P 169 (272)
Q Consensus 98 ~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~-~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-------P 169 (272)
.++||..+...+ |.|+.-.+--+||...+..+... ........+.. .=+|.|-|.|...-+.... .
T Consensus 3 s~~el~~~F~~~--D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~ 76 (145)
T 2bl0_B 3 SADQIQECFQIF--DKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ----LNAKEFDLATFKTVYRKPIKTPTEQSK 76 (145)
T ss_dssp CHHHHHHHHHHH--CTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH----HTSSEECHHHHHHHHTSCCCCGGGGHH
T ss_pred CHHHHHHHHHHh--CCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh----cCCCeEcHHHHHHHHHHHhhcCcccHH
Confidence 344566666655 56666677777777666544211 11122222222 4567777777766654432 4
Q ss_pred cHHHHHhhhccchhhhhcchhh
Q 024138 170 VVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 170 ~lae~F~lMsRDEARHAGFlNk 191 (272)
.+.++|..+-+| +-|+|+.
T Consensus 77 ~l~~~F~~~D~d---~~G~i~~ 95 (145)
T 2bl0_B 77 EMLDAFRALDKE---GNGTIQE 95 (145)
T ss_dssp HHHHHHHHHCSS---SSSEEEH
T ss_pred HHHHHHHHhCCC---CCCeEcH
Confidence 677788777655 4566654
No 34
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=82.00 E-value=2.2 Score=30.75 Aligned_cols=88 Identities=16% Similarity=0.307 Sum_probs=54.2
Q ss_pred ccHHHHHHHHHHHhh-ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc------cCc
Q 024138 97 LNQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNP 169 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~------~NP 169 (272)
+..++.+.+.+-|+. |-|+.-.+--+||...+..+....-..-++-|.+.+ +|.|-|.|...-+.. ...
T Consensus 10 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~~~~~~~~~ 85 (153)
T 2ovk_B 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVSGTDPED 85 (153)
T ss_dssp CCHHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTTTTTCCCTT
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHhccCChHH
Confidence 344455555555543 777777888888888776653222222222233333 888888887766543 235
Q ss_pred cHHHHHhhhccchhhhhcchhh
Q 024138 170 VVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 170 ~lae~F~lMsRDEARHAGFlNk 191 (272)
.+.++|..+-+| +-|+|+.
T Consensus 86 ~l~~~F~~~D~d---~~G~I~~ 104 (153)
T 2ovk_B 86 ALRNAFSMFDED---GQGFIPE 104 (153)
T ss_dssp HHHHHHHTTCSS---CSSCCCH
T ss_pred HHHHHHHHHCCC---CCCeEcH
Confidence 688899988776 6788775
No 35
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=81.99 E-value=0.59 Score=41.01 Aligned_cols=51 Identities=24% Similarity=0.189 Sum_probs=37.5
Q ss_pred HHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 142 FLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 142 FLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+||. +-- ++||...-=+++|- .=|-++++..+.+|||+.|..|...-.+.+
T Consensus 166 ~lEg-i~f-~~~F~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~~~~~l~~~l 216 (286)
T 3olj_A 166 AVEG-IFF-SGSFASIFWLKKRG--LMPGLTFSNELISRDEGLHCDFACLMFKHL 216 (286)
T ss_dssp HHHH-TTT-HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHH-HHH-HHHHHHHHHHHHCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554 433 67777555677664 679999999999999999998876655444
No 36
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=81.78 E-value=2.9 Score=31.74 Aligned_cols=64 Identities=13% Similarity=0.186 Sum_probs=31.5
Q ss_pred ccCCCCcccChhHHHHHhcCC-------hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQ-------GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~-------~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~ 176 (272)
|.|..-.+--+||...+..+- +...+..++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.+++.
T Consensus 98 D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~~ 168 (198)
T 2r2i_A 98 DVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ-KDEVLLDILT 168 (198)
T ss_dssp CTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT-TCHHHHHHHH
T ss_pred cCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-cCHHHHHHHh
Confidence 444555555556655554331 111122223333333444466666666666654 4566666554
No 37
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=81.17 E-value=3 Score=30.60 Aligned_cols=95 Identities=14% Similarity=0.144 Sum_probs=57.2
Q ss_pred cccHHHHHHHHHHH-------h-hccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 96 KLNQAEFEALLQEF-------K-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 96 ~~~~~E~~Aml~Ef-------r-~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
....+||.+++... + -|.|..-++--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+..
T Consensus 56 ~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~- 132 (165)
T 1k94_A 56 KMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK- 132 (165)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH-
Confidence 34555665554332 1 2777888888888988776542211111122222222 45788888888777653
Q ss_pred CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 168 NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 168 NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
.+.+.++|..+-+| +-|+|...+.++
T Consensus 133 ~~~~~~~F~~~D~d---~~G~i~~~~~~~ 158 (165)
T 1k94_A 133 LRALTDFFRKRDHL---QQGSANFIYDDF 158 (165)
T ss_dssp HHHHHHHHHTTCTT---CCSEEEEEHHHH
T ss_pred HHHHHHHHHHhCCC---CCCeEeeeHHHH
Confidence 37788899888665 678887655544
No 38
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=81.13 E-value=4.7 Score=30.27 Aligned_cols=71 Identities=18% Similarity=0.146 Sum_probs=50.7
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~ 166 (272)
...+..++++.+++.+ |-|..-.+--+||...+.....+.+..-+.-+-+.+-..=+|.|-..|+.+-++.
T Consensus 67 ~~~~~~~~~~~~~~~~--D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 137 (204)
T 3e3r_A 67 GLVLDQAEAEGVCRKW--DRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSG 137 (204)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCC
T ss_pred CCCCCHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHcc
Confidence 4556677888888877 5555556666788877776655555555555556667777899999999988863
No 39
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=80.83 E-value=1.2 Score=30.47 Aligned_cols=77 Identities=18% Similarity=0.174 Sum_probs=50.1
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh--------ccCccHHHHHhhhccchh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK--------KTNPVVAEIFSLMSRDEA 183 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk--------~~NP~lae~F~lMsRDEA 183 (272)
|.|+.-.+--+||...+..+.....+.-++-+-+.+-..=+|.|-|.|+..-+. .....+.++|..+-+|
T Consensus 10 D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d-- 87 (134)
T 1jfj_A 10 DVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVD-- 87 (134)
T ss_dssp CTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCS--
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCC--
Confidence 555556666666666665554444444556666667777788888888877663 1123478888888766
Q ss_pred hhhcchhh
Q 024138 184 RHAGYECA 191 (272)
Q Consensus 184 RHAGFlNk 191 (272)
+-|+|+.
T Consensus 88 -~~G~i~~ 94 (134)
T 1jfj_A 88 -GDGKLTK 94 (134)
T ss_dssp -SSSEEEH
T ss_pred -CCCccCH
Confidence 5677765
No 40
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=80.78 E-value=0.29 Score=39.72 Aligned_cols=66 Identities=23% Similarity=0.326 Sum_probs=56.2
Q ss_pred HHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhh
Q 024138 124 FKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 124 F~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
++..+.+..+...+++.+-|-....||.+-..+|..|.... .|+....++.-..+||-||.|..-.
T Consensus 18 ~~~~~~~~~~~~~~el~~lIr~~ikaE~~AI~~Y~qLA~~A--P~ee~k~iI~eIr~DE~rH~~~F~~ 83 (115)
T 2hz8_A 18 YKEVLKKAKEGDEQELARLIQEIVKAEKQAVKVYKEAAEKA--RNPEKRQVIDKILEDEEKHIEWLKA 83 (115)
T ss_dssp HHHHHHHHHHTCHHHHTTTHHHHHHHHHHHHHHHHHHHHSC--CCTTTTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666778888888889999999999999999988 7888999999999999999987654
No 41
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=80.74 E-value=3.8 Score=30.43 Aligned_cols=65 Identities=14% Similarity=0.242 Sum_probs=35.4
Q ss_pred ccCCCCcccChhHHHHHhcC----C--------hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhh
Q 024138 112 DYNQTHFVRNKEFKEAADKM----Q--------GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l----~--------~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~l 177 (272)
|.|..-.+--+||...+..+ . +.....-++-+-+.+-..=+|.|-|.|+.+-++ .+|.+.++|..
T Consensus 109 D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~~~ 185 (190)
T 1fpw_A 109 DLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK-VDPSIIGALNL 185 (190)
T ss_dssp CSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHH-SSTTHHHHHHH
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHHHHHHhh
Confidence 55555556666666554431 0 111122223333334445577888888877775 57777777765
No 42
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C
Probab=80.71 E-value=1.2 Score=40.56 Aligned_cols=66 Identities=21% Similarity=0.278 Sum_probs=57.5
Q ss_pred HHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhh--hccchhhhhcchhhhhhhh
Q 024138 127 AADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL--MSRDEARHAGYECASKSVM 196 (272)
Q Consensus 127 ~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~l--MsRDEARHAGFlNkal~Df 196 (272)
.-|.||++-|+..+++|.+-.-+|+.|+.-..|...+- |.|.+-..+ |+-||.+|+-.+...+.++
T Consensus 21 ~~d~mP~~Yr~~L~~ll~~laD~ELi~~~rl~ew~~~A----P~Lee~iALa~ia~DE~GHa~~l~~~a~~l 88 (311)
T 3pvt_A 21 PQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRA----PTLRRKAILLAKVQDEAGHGLYLYSAAETL 88 (311)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHHHHTHHHHHTTGGGC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34679999999999999999999999999999988887 999875544 6789999999999877766
No 43
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=80.25 E-value=1.3 Score=33.44 Aligned_cols=60 Identities=20% Similarity=0.082 Sum_probs=52.6
Q ss_pred HHHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 137 ~~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+..++.|..-...|+.+...|.-++..+++. -|.+++.|.-.+.+|..||.-|-+-+.+.
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~l 65 (161)
T 1jgc_A 5 AKVIEFLNAALRSELTAISQYWVHFRLQEDWGLAKMAKKSREESIEEMGHADKIIARILFL 65 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4578899999999999999999999999764 57899999999999999999887766555
No 44
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=79.78 E-value=3.6 Score=32.02 Aligned_cols=26 Identities=19% Similarity=0.172 Sum_probs=13.9
Q ss_pred cchhhHHHHHHhhhhhccCccHHHHHh
Q 024138 150 EFSGFLLYKELGRRLKKTNPVVAEIFS 176 (272)
Q Consensus 150 EFSGfLLYKEl~rrlk~~NP~lae~F~ 176 (272)
.=+|.|-|.|+.+-+. ++|.+.++|.
T Consensus 147 d~dG~I~~~Ef~~~~~-~~~~~~~~~~ 172 (211)
T 2ggz_A 147 NNDGELTLEEFINGMA-KDQDLLEIVY 172 (211)
T ss_dssp TCSSSBCHHHHHHHHH-TTTTTHHHHH
T ss_pred CCCCCCcHHHHHHHHH-hCHHHHHHHh
Confidence 3355566666555553 4555555554
No 45
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=79.74 E-value=1.8 Score=32.20 Aligned_cols=31 Identities=23% Similarity=0.331 Sum_probs=17.2
Q ss_pred hhhccchhhHHHHHHhhhhhccCccHHHHHhh
Q 024138 146 SCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (272)
Q Consensus 146 ScTAEFSGfLLYKEl~rrlk~~NP~lae~F~l 177 (272)
.+-..=+|.|-|.|+.+-++ .+|.+.++|.+
T Consensus 155 ~~D~d~dG~i~~~ef~~~~~-~~~~~~~~~~~ 185 (190)
T 1g8i_A 155 MMDKNADGKLTLQEFQEGSK-ADPSIVQALSL 185 (190)
T ss_dssp HHCSSCSSEEEHHHHHHHHH-HCHHHHHHHCC
T ss_pred HhcCCCCCcEeHHHHHHHHH-hChHHHHHHhh
Confidence 33444456666666666554 45666555543
No 46
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=79.57 E-value=1.4 Score=33.13 Aligned_cols=60 Identities=17% Similarity=0.116 Sum_probs=52.1
Q ss_pred HHHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 137 ~~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+..++.|..-...|+.+...|.-++..+++. -|.+++.|.-.|.+|..||--+-+-+...
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~l 65 (158)
T 2y3q_A 5 TKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFL 65 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4578899999999999999999999999754 47899999999999999998777766555
No 47
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=79.53 E-value=1.1 Score=36.05 Aligned_cols=57 Identities=14% Similarity=0.225 Sum_probs=43.1
Q ss_pred HHHHHhhhhccchhh-HHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 140 VEFLERSCTAEFSGF-LLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 140 veFLerScTAEFSGf-LLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
.+-|+...-.|---+ -.|.+..+.-++. .+.++.+|..+++||.+|+.-.-+.|..+
T Consensus 84 ~enL~~A~~GE~~e~~~~Y~~~a~~A~~eG~~~ia~~f~~~a~~E~~Ha~~~~~~l~~l 142 (144)
T 4di0_A 84 RQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDGL 142 (144)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 455666666776665 3676666665544 89999999999999999999888877643
No 48
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=78.63 E-value=4 Score=31.06 Aligned_cols=89 Identities=21% Similarity=0.278 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhh-ccC--CCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC------c
Q 024138 99 QAEFEALLQEFKT-DYN--QTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------P 169 (272)
Q Consensus 99 ~~E~~Aml~Efr~-DyN--r~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N------P 169 (272)
.+|++.+.+-|+. |-| +.-.+--+||...+.. .+.....+++-+-+.+-..=+|.|-|.|...-+.... .
T Consensus 33 ~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~ 111 (207)
T 2ehb_A 33 VEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHE 111 (207)
T ss_dssp HHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHH
T ss_pred HHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHH
Confidence 3444444444442 444 6667777777766543 2222223333344445556678888888877665432 2
Q ss_pred cHHHHHhhhccchhhhhcchhh
Q 024138 170 VVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 170 ~lae~F~lMsRDEARHAGFlNk 191 (272)
.+.++|..+-+| +-|+|+.
T Consensus 112 ~l~~~F~~~D~d---~~G~I~~ 130 (207)
T 2ehb_A 112 KVKFAFKLYDLR---QTGFIER 130 (207)
T ss_dssp HHHHHHHHHCTT---CCSSEEH
T ss_pred HHHHHHHHhCCC---CCCcCcH
Confidence 378888887665 5677665
No 49
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=78.52 E-value=1.6 Score=32.51 Aligned_cols=60 Identities=17% Similarity=0.072 Sum_probs=51.4
Q ss_pred HHHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 137 ~~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
...++-|..-...|+.+...|.-++..+++. -+.+++.|.-.+.+|..||.-|-+-+.+.
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~l 65 (155)
T 2fkz_A 5 KIVIQHLNKILGNELIAINQYFLHARMYEDWGLEKLGKHEYHESIDEMKHADKLIKRILFL 65 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4578889999999999999999999999765 37788888888999999999887766665
No 50
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=77.86 E-value=2.4 Score=30.60 Aligned_cols=54 Identities=15% Similarity=0.167 Sum_probs=26.5
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~ 166 (272)
|.|..-++--+||...+..+-..+-..=++-|.+.+-.. +|.|-|.|..+-+++
T Consensus 97 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_B 97 DEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG 150 (156)
T ss_dssp CTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred CcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence 445555555556655554432222222233444444444 666666666655543
No 51
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=77.29 E-value=4.7 Score=28.90 Aligned_cols=89 Identities=11% Similarity=0.091 Sum_probs=52.7
Q ss_pred HHHHHHHHHHh-hc-cCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh----------cc
Q 024138 100 AEFEALLQEFK-TD-YNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK----------KT 167 (272)
Q Consensus 100 ~E~~Aml~Efr-~D-yNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk----------~~ 167 (272)
++...+.+-|+ -| .|+.-.+--+||...+..+....-..-++-|.+.+-..=+|.|-|.|...-+. ..
T Consensus 10 ~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 89 (158)
T 2jnf_A 10 NQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQM 89 (158)
T ss_dssp HHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTT
T ss_pred HHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhH
Confidence 34444444443 25 56666666677766665443222233344555555556677787777665553 23
Q ss_pred CccHHHHHhhhccchhhhhcchhh
Q 024138 168 NPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 168 NP~lae~F~lMsRDEARHAGFlNk 191 (272)
...+.++|..+-+| +-|+|+.
T Consensus 90 ~~~~~~~F~~~D~d---~~G~I~~ 110 (158)
T 2jnf_A 90 QQELREAFRLYDKE---GNGYIST 110 (158)
T ss_dssp SSTHHHHHHHHCSS---SSSSEEH
T ss_pred HHHHHHHHHHhCCC---CCCeEcH
Confidence 45689999988776 6677765
No 52
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=77.09 E-value=3.8 Score=30.56 Aligned_cols=55 Identities=16% Similarity=0.147 Sum_probs=29.7
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~ 166 (272)
|-|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-++.
T Consensus 73 D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 73 DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp CSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred cCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 5555556666677766655532111112222224445556788888887766543
No 53
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=77.04 E-value=4.3 Score=29.93 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=59.0
Q ss_pred cccHHHHHHHHHHH--------hhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 96 KLNQAEFEALLQEF--------KTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 96 ~~~~~E~~Aml~Ef--------r~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
....+||.+++... .-|.|..-++--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+..
T Consensus 58 ~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~- 134 (167)
T 1gjy_A 58 TMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVK- 134 (167)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH-
Confidence 35556666554332 13777778888889988776553221111222222233 45788999988877653
Q ss_pred CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 168 NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 168 NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
.+.+.++|..+-+| +-|.|+..+.+|
T Consensus 135 ~~~~~~~F~~~D~d---~~G~i~~~~~~~ 160 (167)
T 1gjy_A 135 LRALTDSFRRRDSA---QQGMVNFSYDDF 160 (167)
T ss_dssp HHHHHHHHHHHCTT---CCSEEEEEHHHH
T ss_pred HHHHHHHHHHhCCC---CCeeEEeeHHHH
Confidence 37888999988665 678887655444
No 54
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=76.90 E-value=5 Score=30.57 Aligned_cols=31 Identities=13% Similarity=0.101 Sum_probs=18.4
Q ss_pred hhhhccchhhHHHHHHhhhhhccCccHHHHHh
Q 024138 145 RSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (272)
Q Consensus 145 rScTAEFSGfLLYKEl~rrlk~~NP~lae~F~ 176 (272)
+.+-..=+|.|-|.|+.+-++ ++|.+.+++.
T Consensus 155 ~~~D~d~dG~Is~~Ef~~~~~-~~~~~~~~~~ 185 (204)
T 1jba_A 155 LLVDENGDGQLSLNEFVEGAR-RDKWVMKMLQ 185 (204)
T ss_dssp HHHCCSCCSCBCHHHHHHHHT-TTTTHHHHHH
T ss_pred HHhCCCCCCeEcHHHHHHHHH-cChHHHHHHH
Confidence 333344466777777766664 5666666655
No 55
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=76.87 E-value=2.7 Score=29.56 Aligned_cols=90 Identities=11% Similarity=0.204 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhh-ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc----------
Q 024138 99 QAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---------- 167 (272)
Q Consensus 99 ~~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~---------- 167 (272)
.++.+.+.+-|+. |.|+.-.+--+||...+..+....-..-++-|.+.+-..=+|.|-|.|...-+...
T Consensus 7 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 86 (153)
T 3ox6_A 7 PEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIG 86 (153)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHC
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhcccccccc
Confidence 3444444444432 55666677777787766655322222334445555555667888777776554321
Q ss_pred CccHHHHHhhhccchhhhhcchhh
Q 024138 168 NPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 168 NP~lae~F~lMsRDEARHAGFlNk 191 (272)
-..+.++|..+-+| +-|+|+.
T Consensus 87 ~~~~~~~F~~~D~d---~~G~i~~ 107 (153)
T 3ox6_A 87 VKELRDAFREFDTN---GDGEIST 107 (153)
T ss_dssp HHHHHHHHHHHCTT---CSSSBCH
T ss_pred HHHHHHHHHHhCCC---CCCcCcH
Confidence 13478888888665 6677765
No 56
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=76.67 E-value=5.6 Score=31.59 Aligned_cols=64 Identities=9% Similarity=0.258 Sum_probs=29.8
Q ss_pred ccCCCCcccChhHHHHHh---------cCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHh
Q 024138 112 DYNQTHFVRNKEFKEAAD---------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d---------~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~ 176 (272)
|-|..=++--+||...+. .++++.-+..++-+.+.+-..=.|.|-|.|..+-++ .+|.+.+.|+
T Consensus 139 D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~-~~p~~~~~l~ 211 (214)
T 2l4h_A 139 DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS-RSPDFASSFK 211 (214)
T ss_dssp CTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHH-TCHHHHHHTS
T ss_pred CCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH-hChHHHHhcc
Confidence 444444455555544332 233333333333333334444456666666655554 4555555543
No 57
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=76.39 E-value=5.5 Score=29.63 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=47.1
Q ss_pred cHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC----------C--hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM----------Q--GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 98 ~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l----------~--~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
..+++..+.+.+ |.|..-.+--+||...+..+ + ++....-++-+-+.+-..=+|.|-|.|+.+-++
T Consensus 97 ~~~~~~~~f~~~--D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 174 (190)
T 2l2e_A 97 LNDKLIWAFQLY--DLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSK 174 (190)
T ss_dssp SHHHHHHHHHHH--CTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHH
T ss_pred HHHHHHHHHhHc--cCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 345555555544 66666677778887665441 0 011122233333444556689999999998885
Q ss_pred ccCccHHHHHhh
Q 024138 166 KTNPVVAEIFSL 177 (272)
Q Consensus 166 ~~NP~lae~F~l 177 (272)
.+|.+.++|..
T Consensus 175 -~~~~~~~~l~~ 185 (190)
T 2l2e_A 175 -RDPTIVSALSL 185 (190)
T ss_dssp -TCTHHHHHHHT
T ss_pred -hCcHHHHHHHH
Confidence 68888888765
No 58
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=76.17 E-value=4.4 Score=29.94 Aligned_cols=81 Identities=17% Similarity=0.233 Sum_probs=55.4
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
|.|..-++--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-+.. ...+.++|..+-+| +-|+|..
T Consensus 84 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~-~~~~~~~F~~~D~d---~dG~i~~ 159 (172)
T 2znd_A 84 DRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV-LQRLTDIFRRYDTD---QDGWIQV 159 (172)
T ss_dssp CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH-HHHHHHHHHHHCTT---SSSCCCC
T ss_pred CCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-HHHHHHHHHHhCCC---CCCeEee
Confidence 7777778888888887766533333334555555666666888888888776653 36788899988665 6788865
Q ss_pred hhhhh
Q 024138 192 SKSVM 196 (272)
Q Consensus 192 al~Df 196 (272)
.+.+|
T Consensus 160 ~~~ef 164 (172)
T 2znd_A 160 SYEQY 164 (172)
T ss_dssp CHHHH
T ss_pred eHHHH
Confidence 45554
No 59
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=76.07 E-value=7.4 Score=29.57 Aligned_cols=75 Identities=17% Similarity=0.238 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHh--------cCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccH
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVV 171 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d--------~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~l 171 (272)
+++..+...+ |.|..-++--+||...+. .++++.-+..++-+-+.+-..=.|.|-|.|..+-++ .+|.+
T Consensus 111 ~~l~~~F~~~--D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~ 187 (207)
T 2ehb_A 111 EKVKFAFKLY--DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS-LNPSL 187 (207)
T ss_dssp HHHHHHHHHH--CTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HCGGG
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHH
Confidence 3344444333 555555666667766542 344444333343333455556678888888877775 56776
Q ss_pred HHHHhh
Q 024138 172 AEIFSL 177 (272)
Q Consensus 172 ae~F~l 177 (272)
.+.+..
T Consensus 188 ~~~~~~ 193 (207)
T 2ehb_A 188 IKNMTL 193 (207)
T ss_dssp GGGGCC
T ss_pred HHHhcc
Confidence 666654
No 60
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=75.76 E-value=1.2 Score=37.72 Aligned_cols=63 Identities=17% Similarity=0.160 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhhhccchh-hHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhhh
Q 024138 135 LRQIFVEFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVMY 197 (272)
Q Consensus 135 ~R~~FveFLerScTAEFSG-fLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df~ 197 (272)
+.+--.+-|+.+...|--- --.|.+..+.-+.. ++.++..|..++.+|.+|+.-..++|..+.
T Consensus 112 T~eN~~~~L~~A~~GE~~E~~~mYp~fA~~A~eEG~~eiA~~F~~ia~~Ek~H~~ry~~ll~~l~ 176 (179)
T 3qhb_A 112 DSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLL 176 (179)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444477777777654 35688888887766 899999999999999999999998887653
No 61
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=75.24 E-value=2.7 Score=32.57 Aligned_cols=60 Identities=18% Similarity=0.078 Sum_probs=52.2
Q ss_pred HHHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 137 ~~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+..++.|..-...|+.+...|.-++..+++. -|.+++.|.-.|.+|..||.-+-+-+.+.
T Consensus 7 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~l 67 (174)
T 3qb9_A 7 PDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLL 67 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4578899999999999999999999999764 48999999999999999998776666555
No 62
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=75.13 E-value=7.7 Score=29.62 Aligned_cols=79 Identities=20% Similarity=0.221 Sum_probs=45.8
Q ss_pred ccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-----c
Q 024138 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-----P 169 (272)
Q Consensus 95 ~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-----P 169 (272)
..+..++++.+++.+ |-|..-.+--+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++..+ .
T Consensus 58 ~~~~~~~~~~l~~~~--D~d~dG~I~~~EF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~e~~~~l~~~g~~~~~~ 129 (191)
T 1y1x_A 58 VPFSLATTEKLLHMY--DKNHSGEITFDEFKDLHHFI-LSMREGFRKR-----DSSGDGRLDSNEVRAALLSSGYQVSEQ 129 (191)
T ss_dssp BCCCHHHHHHHHHHH--CTTCSSSBCHHHHHHHHHHH-HHHHHHHHHH-----CTTSSSCBCHHHHHHHHHTTSCCCCHH
T ss_pred CCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHH-HHHHHHHHHh-----CCCCCCeEcHHHHHHHHHHhCCCCCHH
Confidence 345566777777665 44555556666776655543 3455555443 445577887887777665432 3
Q ss_pred cHHHHHhhhccc
Q 024138 170 VVAEIFSLMSRD 181 (272)
Q Consensus 170 ~lae~F~lMsRD 181 (272)
.+.++|..+-.|
T Consensus 130 ~~~~~~~~~D~d 141 (191)
T 1y1x_A 130 TFQALMRKFDRQ 141 (191)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHHhCCC
Confidence 455666655444
No 63
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=74.96 E-value=5.4 Score=29.52 Aligned_cols=33 Identities=9% Similarity=0.123 Sum_probs=20.0
Q ss_pred HhhhhccchhhHHHHHHhhhhhccCccHHHHHhh
Q 024138 144 ERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (272)
Q Consensus 144 erScTAEFSGfLLYKEl~rrlk~~NP~lae~F~l 177 (272)
-+.+-..=+|.|-|.|..+-++ .+|.+.+.|+.
T Consensus 146 f~~~D~d~dG~i~~~Ef~~~~~-~~~~~~~~l~~ 178 (183)
T 1s6c_A 146 FQKMDKNKDGIVTLDEFLESXQ-EDDNIMRSLQL 178 (183)
T ss_dssp HHHHCTTCSSEECHHHHHHHTT-SCCHHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHHHh-cChHHHHHHHH
Confidence 3344444567777777766664 56766666654
No 64
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=74.44 E-value=3.8 Score=31.33 Aligned_cols=97 Identities=15% Similarity=0.145 Sum_probs=58.3
Q ss_pred cccccHHHHHHHHHH-------Hh-hccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 94 NKKLNQAEFEALLQE-------FK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 94 d~~~~~~E~~Aml~E-------fr-~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
|-...-+||.+++.. |+ -|.|..-++--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+.
T Consensus 87 ~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~ 164 (198)
T 1juo_A 87 SGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCV 164 (198)
T ss_dssp SSCEEHHHHHHHHHHHHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHH
T ss_pred CCeECHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH
Confidence 334566677666543 22 2777777787888877766542221112222233333 4478888888877664
Q ss_pred ccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 166 KTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 166 ~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
. .+.+.++|..+-+| +-|+|+..+.+|
T Consensus 165 ~-~~~~~~~F~~~D~d---~~G~is~~~~~~ 191 (198)
T 1juo_A 165 K-LRALTDSFRRRDTA---QQGVVNFPYDDF 191 (198)
T ss_dssp H-HHHHHHHHHHTCTT---CCSEEEEEHHHH
T ss_pred H-HHHHHHHHHHhCCC---CCCeEeecHHHH
Confidence 3 36788888888665 678887654444
No 65
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=74.29 E-value=5.5 Score=29.52 Aligned_cols=95 Identities=16% Similarity=0.197 Sum_probs=59.0
Q ss_pred ccHHHHHHHHHH-------Hh-hccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC
Q 024138 97 LNQAEFEALLQE-------FK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN 168 (272)
Q Consensus 97 ~~~~E~~Aml~E-------fr-~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N 168 (272)
..-+||.+++.. |+ -|.|..-.+--+||...+..+....-..-++-+.+.+. .=+|.|-|.|..+-+.. .
T Consensus 64 i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~-~ 141 (173)
T 1alv_A 64 LGFEEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR-L 141 (173)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH-H
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH-H
Confidence 455566555433 22 27777778888899877765422222223333333444 55788888888766642 3
Q ss_pred ccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 169 PVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 169 P~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
..+.++|..+-+| +-|+|...+.++
T Consensus 142 ~~~~~~F~~~D~d---~~G~i~~~~~~~ 166 (173)
T 1alv_A 142 DAMFRAFKSLDKD---GTGQIQVNIQEW 166 (173)
T ss_dssp HHHHHHHHHHSSS---CCSEEEEEHHHH
T ss_pred HHHHHHHHHhCCC---CCCeecHhHHHH
Confidence 6788899988765 678887655443
No 66
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=72.84 E-value=3.7 Score=29.77 Aligned_cols=19 Identities=21% Similarity=0.364 Sum_probs=10.0
Q ss_pred cHHHHHhhhccchhhhhcchhh
Q 024138 170 VVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 170 ~lae~F~lMsRDEARHAGFlNk 191 (272)
.+.++|..+-+| +-|+|+.
T Consensus 102 ~~~~~F~~~D~d---~~G~i~~ 120 (169)
T 3qrx_A 102 EILKAFRLFDDD---NSGTITI 120 (169)
T ss_dssp HHHHHHHHHCTT---CSSSBCH
T ss_pred HHHHHHHHhCCC---CCCcCCH
Confidence 455566655444 4555544
No 67
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=72.83 E-value=4.8 Score=32.54 Aligned_cols=99 Identities=13% Similarity=0.124 Sum_probs=52.0
Q ss_pred ChHHHhhhhcccccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHH
Q 024138 81 DFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKEL 160 (272)
Q Consensus 81 DFd~m~~lf~~eid~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl 160 (272)
+++++.+++..-.......++++.+++.+ |.|..-.+--+||...+..+.......=+..+-+-+-..=+|+|-+.|+
T Consensus 110 ~~~ef~~~l~~~~~~~~~~~~~~~~f~~~--D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef 187 (256)
T 2jul_A 110 DEDTFKLIYSQFFPQGDATTYAHFLFNAF--DADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEM 187 (256)
T ss_dssp EHHHHHHHHHHHCCSSCCHHHHHHHHHHS--SCSCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHH
T ss_pred CHHHHHHHHHHHcccCCcHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 55555554432222344556777777765 4555556666777665544311111222223334455566777777776
Q ss_pred hhhhhc-----------------cCccHHHHHhhhccc
Q 024138 161 GRRLKK-----------------TNPVVAEIFSLMSRD 181 (272)
Q Consensus 161 ~rrlk~-----------------~NP~lae~F~lMsRD 181 (272)
..=++. ....+.++|..+-+|
T Consensus 188 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d 225 (256)
T 2jul_A 188 LAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRN 225 (256)
T ss_dssp HHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCC
Confidence 655432 123466677666555
No 68
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=72.02 E-value=3.9 Score=30.00 Aligned_cols=77 Identities=17% Similarity=0.221 Sum_probs=44.9
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh----ccC--ccHHHHHhhhccchhhh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK----KTN--PVVAEIFSLMSRDEARH 185 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk----~~N--P~lae~F~lMsRDEARH 185 (272)
|-|..-.+--+||...+..+.......-+.-+...+...-+|.+-|.|....+. ... ..|.++|..+-+| +
T Consensus 20 D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d---~ 96 (148)
T 2lmt_A 20 DKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRD---G 96 (148)
T ss_dssp HCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSS---C
T ss_pred cCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCC---C
Confidence 666666777777776655443222223344445556666677777777544332 222 2377888877666 5
Q ss_pred hcchhh
Q 024138 186 AGYECA 191 (272)
Q Consensus 186 AGFlNk 191 (272)
-|+|+.
T Consensus 97 ~G~I~~ 102 (148)
T 2lmt_A 97 DGFISP 102 (148)
T ss_dssp SSEECH
T ss_pred cCcCcH
Confidence 677765
No 69
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=72.00 E-value=10 Score=29.82 Aligned_cols=65 Identities=14% Similarity=0.220 Sum_probs=38.0
Q ss_pred ccCCCCcccChhHHHHHh--------cCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhh
Q 024138 112 DYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d--------~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~l 177 (272)
|.|..-++--+||...+. .++++.-+..++-+-+.+-..=+|.|-|.|..+-++ ++|.+.+.+.+
T Consensus 132 D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~-~~~~~~~~~~~ 204 (226)
T 2zfd_A 132 DLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL-RHPSLLKNMTL 204 (226)
T ss_dssp CTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHH-HSGGGGGGGCC
T ss_pred CCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHHHHHhch
Confidence 556666666677766552 234433333333333345555678888888877775 56776666654
No 70
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=71.75 E-value=3.6 Score=28.76 Aligned_cols=77 Identities=12% Similarity=0.135 Sum_probs=41.4
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc------cCccHHHHHhhhccchhhh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAEIFSLMSRDEARH 185 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~------~NP~lae~F~lMsRDEARH 185 (272)
|.|..-.+--+||...+..+....-..-++-|.+.+...-+|.|-|.|...-+.. ....+.++|..+-+| +
T Consensus 21 D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d---~ 97 (147)
T 4ds7_A 21 DKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKN---G 97 (147)
T ss_dssp CTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTT---C
T ss_pred CCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCC---C
Confidence 5555566666666665554432233333444555555555666666665543321 123466677766544 4
Q ss_pred hcchhh
Q 024138 186 AGYECA 191 (272)
Q Consensus 186 AGFlNk 191 (272)
-|.|+.
T Consensus 98 ~G~i~~ 103 (147)
T 4ds7_A 98 DGLISA 103 (147)
T ss_dssp SSEECH
T ss_pred CCeECH
Confidence 566654
No 71
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=71.53 E-value=7.6 Score=28.02 Aligned_cols=70 Identities=20% Similarity=0.185 Sum_probs=37.6
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
...+..++++.++..+ |.|..-.+--+||...+..+....+..-+..+-+.+-..=+|+|-..|+.+-++
T Consensus 57 ~~~~~~~~~~~~~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~ 126 (166)
T 2aao_A 57 GANLKESEILDLMQAA--DVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACE 126 (166)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 4455566777777665 444444566667766655443222122222222333455567777777776664
No 72
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=71.49 E-value=17 Score=25.36 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=43.3
Q ss_pred cccccHHHHHHHHHHHhh-ccCCCCcccChhHHHHHhcC---C-----hHHHHHHHHHHHhhhhccchhhHHHHHHhhhh
Q 024138 94 NKKLNQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKM---Q-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l---~-----~~~R~~FveFLerScTAEFSGfLLYKEl~rrl 164 (272)
...+..+++..+++.+.. |.|. -.+-=+||...+..+ . ...++.| +.+-..=+|.|-..|+.+-+
T Consensus 38 ~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F-----~~~D~d~~G~i~~~el~~~l 111 (149)
T 2mys_C 38 GQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGL-----RVFDKEGNGTVMGAELRHVL 111 (149)
T ss_pred CCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHH-----HHhCCCCCceEcHHHHHHHH
Confidence 445667788888888732 6666 666677887666553 1 2233333 34455668888888888777
Q ss_pred hc
Q 024138 165 KK 166 (272)
Q Consensus 165 k~ 166 (272)
+.
T Consensus 112 ~~ 113 (149)
T 2mys_C 112 AT 113 (149)
T ss_pred HH
Confidence 54
No 73
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=71.36 E-value=6.2 Score=30.17 Aligned_cols=97 Identities=15% Similarity=0.146 Sum_probs=65.7
Q ss_pred cccHHHHHHHHHH-------Hh-hccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 96 KLNQAEFEALLQE-------FK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 96 ~~~~~E~~Aml~E-------fr-~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
....+||.+++.. |+ -|-|..-++--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-+. .
T Consensus 79 ~I~~~EF~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~-~ 157 (191)
T 1y1x_A 79 EITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI-F 157 (191)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH-H
T ss_pred eEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH-H
Confidence 4566777666532 21 2778888888899988887653332233344444555556689999999988775 3
Q ss_pred CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 168 NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 168 NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
.+.+.++|..+-+| +-|.|+-...+|
T Consensus 158 ~~~~~~~F~~~D~d---~dG~i~~~~~eF 183 (191)
T 1y1x_A 158 VCRVRNVFAFYDRE---RTGQVTFTFDTF 183 (191)
T ss_dssp HHHHHHHHHHHCTT---CCSEEEEEHHHH
T ss_pred HHHHHHHHHHhCcC---CCceEEeeHHHH
Confidence 47889999988665 568877666655
No 74
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=70.51 E-value=4 Score=30.11 Aligned_cols=72 Identities=10% Similarity=0.072 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhhccCCCCcccChhHHHHHhcCCh-HHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHH
Q 024138 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQG-PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVA 172 (272)
Q Consensus 99 ~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~-~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~la 172 (272)
.+++..+.+.| |.|..-++--+||...+..+.. ..-..=++-+.+.+-..=.|.|-|.|..+-+++..|.+-
T Consensus 39 ~~~l~~~F~~~--D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~ 111 (135)
T 3h4s_E 39 VSELCKGFSLL--ADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMM 111 (135)
T ss_dssp HHHHHHHHHHH--SBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCHHHH
Confidence 34555555555 7777778888888877765541 222223444445555566788888888887766555443
No 75
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=69.27 E-value=5.2 Score=28.55 Aligned_cols=90 Identities=11% Similarity=0.155 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHh-hccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc---------cC
Q 024138 99 QAEFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---------TN 168 (272)
Q Consensus 99 ~~E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~---------~N 168 (272)
+++++.+.+-|+ -|.|..-.+--.||...+..+.......-++-|.+.+-..=+|.|-|.|...-+.. ..
T Consensus 16 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 95 (162)
T 1top_A 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSE 95 (162)
T ss_dssp HHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccH
Confidence 344444444443 36666667777777766655432222233344444455555666666665544432 22
Q ss_pred ccHHHHHhhhccchhhhhcchhh
Q 024138 169 PVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 169 P~lae~F~lMsRDEARHAGFlNk 191 (272)
..+.++|..+-+| +-|+|+.
T Consensus 96 ~~~~~~F~~~D~d---~~G~I~~ 115 (162)
T 1top_A 96 EELANCFRIFDKN---ADGFIDI 115 (162)
T ss_dssp HHHHHHHHHHCTT---CSSCBCH
T ss_pred HHHHHHHHHhCCC---CCCcCcH
Confidence 3567778777665 5677665
No 76
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=69.03 E-value=4.5 Score=30.48 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhc
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS 179 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMs 179 (272)
+++..+...| |.|..-++--+||...+..+-...-..-++-+.+.+-..=.|.|-|.|...-+....+.+.++|..+-
T Consensus 50 ~~l~~~F~~~--D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~~D 127 (150)
T 2jjz_A 50 TAFKEKYMEF--DLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFE 127 (150)
T ss_dssp HHHHHHHTTS--CCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSSSCCHHHHHHC--
T ss_pred HHHHHHHHHh--CCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3444444433 77777788888888777655322112223334445555567999999988888777888999999887
Q ss_pred cc
Q 024138 180 RD 181 (272)
Q Consensus 180 RD 181 (272)
.|
T Consensus 128 ~d 129 (150)
T 2jjz_A 128 GK 129 (150)
T ss_dssp --
T ss_pred CC
Confidence 66
No 77
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=68.98 E-value=7.2 Score=31.07 Aligned_cols=103 Identities=15% Similarity=0.284 Sum_probs=66.6
Q ss_pred ccChHHHhhhhcccccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChH-HHHHHHHHHHhhhhccchhhHHH
Q 024138 79 TTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLY 157 (272)
Q Consensus 79 TTDFd~m~~lf~~eid~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~-~R~~FveFLerScTAEFSGfLLY 157 (272)
..+++.+.+. ....++|++.+.+.|..+ |+.-.+--+||...+..+-+. .....++-+-+.+-..=+|.|-+
T Consensus 36 ~~~l~~l~~~------~~~s~~ei~~l~~~Fd~~-d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~ 108 (224)
T 1s1e_A 36 PEGLEQLEAQ------TNFTKRELQVLYRGFKNE-CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKF 108 (224)
T ss_dssp --CHHHHHHH------SSCCHHHHHHHHHHHHHH-CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCH
T ss_pred HHHHHHHHHH------cCCCHHHHHHHHHHHHhh-CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeH
Confidence 3455555553 236778999999999885 455667788998888766322 22334444455556666888888
Q ss_pred HHHhhhhhc-----cCccHHHHHhhhccchhhhhcchhh
Q 024138 158 KELGRRLKK-----TNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 158 KEl~rrlk~-----~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
.|+..-+.. ....+.++|..+-.| +-|+|+.
T Consensus 109 ~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d---~dG~Is~ 144 (224)
T 1s1e_A 109 EDFVTALSILLRGTVHEKLRWTFNLYDIN---KDGYINK 144 (224)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHCTT---CCSEECH
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHcCC---CCCeECH
Confidence 887665532 234678888887665 5677775
No 78
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=68.68 E-value=2 Score=35.49 Aligned_cols=58 Identities=14% Similarity=-0.017 Sum_probs=43.0
Q ss_pred HHHHHhhhhccchh-hHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhhh
Q 024138 140 VEFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVMY 197 (272)
Q Consensus 140 veFLerScTAEFSG-fLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df~ 197 (272)
.+=|+.+.-.|--. --.|+++.+.-+.. ++.++.+|..++.||.+|+..+.++|..+.
T Consensus 69 ~enL~~a~~gE~~e~~~mY~~~a~~A~eeg~~~~a~~f~~i~~~E~~H~~~~~~~l~~l~ 128 (170)
T 3pwf_A 69 PENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAE 128 (170)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444555555443 34576666665544 899999999999999999999999999983
No 79
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=68.44 E-value=5.3 Score=28.13 Aligned_cols=54 Identities=22% Similarity=0.304 Sum_probs=28.8
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
|.|..-++--+||...+..+...+-..=++-+.+.+-..=.|.|-|.|..+-++
T Consensus 86 D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 139 (143)
T 3j04_B 86 DEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILK 139 (143)
T ss_dssp CSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHH
T ss_pred CCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 555666666666766665543322222334444444444566666666665554
No 80
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=68.43 E-value=9 Score=29.06 Aligned_cols=19 Identities=21% Similarity=0.438 Sum_probs=11.1
Q ss_pred cHHHHHhhhccchhhhhcchhh
Q 024138 170 VVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 170 ~lae~F~lMsRDEARHAGFlNk 191 (272)
.|.+.|...-+| +-|+|+.
T Consensus 86 ~l~~aF~~fD~d---~~G~I~~ 104 (153)
T 3i5g_B 86 ALRNAFSMFDED---GQGFIPE 104 (153)
T ss_dssp HHHHHHHTTCSS---CSSCCCH
T ss_pred HHHHHHhccccC---CCCeEeH
Confidence 466677666555 4466554
No 81
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=68.39 E-value=6 Score=28.29 Aligned_cols=77 Identities=10% Similarity=0.146 Sum_probs=42.7
Q ss_pred ccCC-CCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc---------CccHHHHHhhhccc
Q 024138 112 DYNQ-THFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---------NPVVAEIFSLMSRD 181 (272)
Q Consensus 112 DyNr-~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~---------NP~lae~F~lMsRD 181 (272)
|.|. .-.+--+||...+..+....-..-++-|.+.+-..=+|.|-|.|...-+... ...+.++|..+-+|
T Consensus 28 D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 107 (161)
T 1dtl_A 28 VLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKN 107 (161)
T ss_dssp TTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTT
T ss_pred cCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCC
Confidence 5555 5556666666655544221122234444455555566777777665544322 23477788887665
Q ss_pred hhhhhcchhh
Q 024138 182 EARHAGYECA 191 (272)
Q Consensus 182 EARHAGFlNk 191 (272)
+-|+|+.
T Consensus 108 ---~~G~i~~ 114 (161)
T 1dtl_A 108 ---ADGYIDL 114 (161)
T ss_dssp ---CSSEEEH
T ss_pred ---CCCcCcH
Confidence 5677765
No 82
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=68.35 E-value=11 Score=30.06 Aligned_cols=78 Identities=18% Similarity=0.143 Sum_probs=47.0
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-----C
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-----N 168 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-----N 168 (272)
...+..++++.+++++ |-|..-.+-=+||...+..+ .+++..|-.| -..=+|.|-..|+.+=++.- .
T Consensus 81 g~~~~~~~~~~l~~~~--D~d~dg~I~~~EF~~~~~~~-~~l~~~F~~~-----D~d~~G~I~~~El~~~l~~~g~~~~~ 152 (220)
T 3sjs_A 81 GIRLSPQTALRMMRIF--DTDFNGHISFYEFMAMYKFM-ELAYNLFVMN-----ARARSGTLEPHEILPALQQLGFYINQ 152 (220)
T ss_dssp GBCCCHHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHH-HHHHHHHHHH-----CCSSTTEECHHHHHHHHHHHTCCCCH
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHH-----CCCCCCCCcHHHHHHHHHHhCCCCCH
Confidence 4455667777777776 44555556666776666554 4566666444 44557888888877665432 2
Q ss_pred ccHHHHHhhhc
Q 024138 169 PVVAEIFSLMS 179 (272)
Q Consensus 169 P~lae~F~lMs 179 (272)
.++.++|..+.
T Consensus 153 ~~~~~l~~~~d 163 (220)
T 3sjs_A 153 RTSLLLHRLFA 163 (220)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 23555555554
No 83
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=67.83 E-value=2.8 Score=29.56 Aligned_cols=42 Identities=14% Similarity=0.279 Sum_probs=19.9
Q ss_pred hhccchhhHHHHHHhhhhhc------cCccHHHHHhhhccchhhhhcchhh
Q 024138 147 CTAEFSGFLLYKELGRRLKK------TNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 147 cTAEFSGfLLYKEl~rrlk~------~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
+-..=+|.|-|.|...-+.. ....+.++|..+-+| +-|+|+.
T Consensus 51 ~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d---~~G~i~~ 98 (142)
T 2bl0_C 51 ADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPE---GTGYIPK 98 (142)
T ss_dssp HCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCS---SCSCEEH
T ss_pred hCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCC---CCCcCcH
Confidence 33334455555554433321 123456666666554 4565554
No 84
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=67.68 E-value=6.6 Score=27.61 Aligned_cols=20 Identities=15% Similarity=0.484 Sum_probs=13.8
Q ss_pred chhhHHHH-HHhhhhhccCcc
Q 024138 151 FSGFLLYK-ELGRRLKKTNPV 170 (272)
Q Consensus 151 FSGfLLYK-El~rrlk~~NP~ 170 (272)
-|+|+||- |....++..||.
T Consensus 9 ~naf~lf~~~~r~~~~~~~p~ 29 (81)
T 1i11_A 9 MNAFMVWAKDERRKILQAFPD 29 (81)
T ss_dssp CCHHHHHHHHHHHHHHTTCSS
T ss_pred CCHHHHHHHHHHHHHHHHCCC
Confidence 36777764 666677777875
No 85
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=67.56 E-value=4.9 Score=28.09 Aligned_cols=92 Identities=17% Similarity=0.146 Sum_probs=54.5
Q ss_pred ccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC-ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC---
Q 024138 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN--- 168 (272)
Q Consensus 93 id~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N--- 168 (272)
+...+..++++.++..+ |.|..-.+-=+||...+..+ .......-+.-+-+.+-..=+|.|-..|+.+-++.-+
T Consensus 40 ~~~~~~~~~~~~l~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~ 117 (147)
T 4ds7_A 40 LGLSPSEAEVADLMNEI--DVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL 117 (147)
T ss_dssp TTCCCCHHHHHHHHHHH--CTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC
T ss_pred hCCCCCHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCC
Confidence 35566777888888877 55566667777776655432 1111112222222444556688888888888776433
Q ss_pred --ccHHHHHhhhccchhhhhcchh
Q 024138 169 --PVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 169 --P~lae~F~lMsRDEARHAGFlN 190 (272)
..+.++|..+. .+-|.|+
T Consensus 118 ~~~~~~~~~~~~d----~~dg~i~ 137 (147)
T 4ds7_A 118 TDAEVDEMLREVS----DGSGEIN 137 (147)
T ss_dssp CHHHHHHHHHHHS----SSCSSEE
T ss_pred CHHHHHHHHHHhc----CCCCcCc
Confidence 45667777764 3556654
No 86
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=67.31 E-value=3.8 Score=34.54 Aligned_cols=59 Identities=20% Similarity=0.259 Sum_probs=49.6
Q ss_pred HHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhhhh
Q 024138 140 VEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVMYV 198 (272)
Q Consensus 140 veFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df~r 198 (272)
++-|......|....-.|...++..++. .+.++.+|...|.+|..||.-+-+.|.++..
T Consensus 30 ~~nL~~a~~gE~~a~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~l~~ 89 (202)
T 1yuz_A 30 LENLKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEP 89 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4677788888888888888888887766 7999999999999999999988888876633
No 87
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=67.19 E-value=3 Score=29.72 Aligned_cols=77 Identities=9% Similarity=-0.025 Sum_probs=45.9
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhcc--chhhHHHHHHhhhhhcc--------CccHHHHHhhhccc
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAE--FSGFLLYKELGRRLKKT--------NPVVAEIFSLMSRD 181 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAE--FSGfLLYKEl~rrlk~~--------NP~lae~F~lMsRD 181 (272)
|.|+.-.+--+||...+..+....-..-++-|.+.+-.. =+|.|-|.|...-+... ...+.++|..+-+|
T Consensus 20 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d 99 (151)
T 1w7j_B 20 DRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKE 99 (151)
T ss_dssp CCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCTT
T ss_pred CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHHHHHHHHhCCC
Confidence 666666777777776665542222223344455555555 56777777766554432 24577788888666
Q ss_pred hhhhhcchhh
Q 024138 182 EARHAGYECA 191 (272)
Q Consensus 182 EARHAGFlNk 191 (272)
+-|+|+.
T Consensus 100 ---~~G~I~~ 106 (151)
T 1w7j_B 100 ---GNGKVMG 106 (151)
T ss_dssp ---SSSEEEH
T ss_pred ---CCCcCcH
Confidence 6677765
No 88
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=67.04 E-value=7.9 Score=27.92 Aligned_cols=90 Identities=19% Similarity=0.278 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHh-hccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc-----cCccHH
Q 024138 99 QAEFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVVA 172 (272)
Q Consensus 99 ~~E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~-----~NP~la 172 (272)
.+++..+.+-|+ -|.|..-.+--+||...+..+....-..-++-+.+.+-..-+|.|-|.|...-+.. ....+.
T Consensus 23 ~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 102 (166)
T 2aao_A 23 EEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLF 102 (166)
T ss_dssp HHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHH
Confidence 344444444443 37777788888888887766533323334555666666666788888776654422 235678
Q ss_pred HHHhhhccchhhhhcchhh
Q 024138 173 EIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 173 e~F~lMsRDEARHAGFlNk 191 (272)
.+|..+-.| +-|+|+.
T Consensus 103 ~~F~~~D~d---~~G~i~~ 118 (166)
T 2aao_A 103 AAFTYFDKD---GSGYITP 118 (166)
T ss_dssp HHHHHHCTT---CSSSBCH
T ss_pred HHHHHhCCC---CCCcCcH
Confidence 889888665 5677765
No 89
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=67.02 E-value=8.3 Score=30.34 Aligned_cols=73 Identities=18% Similarity=0.260 Sum_probs=41.6
Q ss_pred CCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC------ccHHHHHhhhccchhhhhcc
Q 024138 115 QTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------PVVAEIFSLMSRDEARHAGY 188 (272)
Q Consensus 115 r~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N------P~lae~F~lMsRDEARHAGF 188 (272)
+.-.+--+||...+.. .+......++-+-+.+-..=+|.|-|.|...-+.... ..+.++|..+-+| +-|+
T Consensus 63 ~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d---~~G~ 138 (226)
T 2zfd_A 63 DDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLK---QQGF 138 (226)
T ss_dssp CSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTT---SSSS
T ss_pred CCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCC---CCCc
Confidence 6666767777666543 1111112233333344455577788887766554322 2488888888776 5677
Q ss_pred hhh
Q 024138 189 ECA 191 (272)
Q Consensus 189 lNk 191 (272)
|+.
T Consensus 139 Is~ 141 (226)
T 2zfd_A 139 IER 141 (226)
T ss_dssp EEH
T ss_pred ccH
Confidence 765
No 90
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=66.51 E-value=3.9 Score=30.33 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=50.7
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCC-hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc-----cCc
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNP 169 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~-----~NP 169 (272)
...++|+..+.+.|..| |+...+--+||...+..+- .......++-+-+.+-..=+|.|-+.|+..-+.. ...
T Consensus 21 ~~~~~~i~~~~~~fd~~-~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~ 99 (190)
T 1fpw_A 21 YFDRREIQQWHKGFLRD-CPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE 99 (190)
T ss_dssp CSTHHHHHHHHHHHHHH-CTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTH
T ss_pred CCCHHHHHHHHHHHHHH-CCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHH
Confidence 34556667777777666 4455566666666554431 0000112333334444555777777777655432 234
Q ss_pred cHHHHHhhhccchhhhhcchhh
Q 024138 170 VVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 170 ~lae~F~lMsRDEARHAGFlNk 191 (272)
.+.++|..+-+| +-|.|+.
T Consensus 100 ~~~~~f~~~D~d---~~G~i~~ 118 (190)
T 1fpw_A 100 KLSWAFELYDLN---HDGYITF 118 (190)
T ss_dssp HHHHHHHHHCSS---CSSEEEH
T ss_pred HHHHHHHHhcCC---CCCcCcH
Confidence 678888877665 4576664
No 91
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=66.33 E-value=11 Score=26.32 Aligned_cols=76 Identities=8% Similarity=0.041 Sum_probs=41.8
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhh---hccchhhHHHHHHhhhhhcc--------CccHHHHHhhhcc
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSC---TAEFSGFLLYKELGRRLKKT--------NPVVAEIFSLMSR 180 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerSc---TAEFSGfLLYKEl~rrlk~~--------NP~lae~F~lMsR 180 (272)
|-|..-.+--+||...+..+....-..-++-|.+.+ -..= |.|-|.|...-+... ...+.++|..+-+
T Consensus 18 D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 96 (149)
T 2mys_C 18 DRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDK 96 (149)
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCC
Confidence 555666666667766555432211122233333334 3333 777777766555432 2457788888866
Q ss_pred chhhhhcchhh
Q 024138 181 DEARHAGYECA 191 (272)
Q Consensus 181 DEARHAGFlNk 191 (272)
| +-|+|..
T Consensus 97 d---~~G~i~~ 104 (149)
T 2mys_C 97 E---GNGTVMG 104 (149)
T ss_pred C---CCceEcH
Confidence 6 5677765
No 92
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=66.10 E-value=7.2 Score=29.05 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=17.0
Q ss_pred HHhhhhccchhhHHHHHHhhhhhccCccHHHHH
Q 024138 143 LERSCTAEFSGFLLYKELGRRLKKTNPVVAEIF 175 (272)
Q Consensus 143 LerScTAEFSGfLLYKEl~rrlk~~NP~lae~F 175 (272)
+.+.+-..=.|.|-|.|..+-++ .+|.+.++|
T Consensus 148 ~~~~~D~d~dG~I~~~EF~~~~~-~~~~~~~~~ 179 (183)
T 1dgu_A 148 ILEESDIDRDGTINLSEFQHVIS-RSPDFASSF 179 (183)
T ss_dssp HHHHHCTTSSSEEEHHHHHHHHC-SSCHHHHCC
T ss_pred HHHHhCCCCCCeEcHHHHHHHHH-hChHHHHhc
Confidence 33444444456666666666554 455555443
No 93
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=66.07 E-value=6.3 Score=29.97 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=50.1
Q ss_pred HHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-ccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 136 R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-P~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
++..++-|..-+..|+.....|.-++..++..+ +.+++.|.-.|.+|..||--|-+-+.+.
T Consensus 15 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~lae~i~~l 76 (170)
T 2vzb_A 15 VKSLIDQLNAALSEEWLAYYQYWVGALVVEGAMRADVQGEFEEHAEEERHHAQLIADRIIEL 76 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 456789999999999999999999999996532 5566777777999999998777766555
No 94
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=65.47 E-value=4.4 Score=31.30 Aligned_cols=58 Identities=21% Similarity=0.256 Sum_probs=46.8
Q ss_pred HHHHHHhhhhccchh-hHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 139 FVEFLERSCTAEFSG-FLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 139 FveFLerScTAEFSG-fLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-.|-|+...-.|--- --.|+++.+--++ ..+.++++|..++.||.+|+..+.+.|..+
T Consensus 81 ~~e~L~~al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~i~~~E~~H~~~~~~~l~~i 140 (144)
T 1j30_A 81 LEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQL 140 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677777778777 4788887777654 489999999999999999999999888654
No 95
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=65.34 E-value=5.7 Score=28.78 Aligned_cols=93 Identities=15% Similarity=0.110 Sum_probs=57.5
Q ss_pred ccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC-ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC---
Q 024138 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN--- 168 (272)
Q Consensus 93 id~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N--- 168 (272)
+...+..++++.++..+ |.|..-.+-=+||...+... .......-+.-+-+.+-..=+|.|-..|+.+-++.-+
T Consensus 57 ~~~~~~~~~~~~~~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~ 134 (169)
T 3qrx_A 57 LGFEPKKEEIKKMISEI--DKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENL 134 (169)
T ss_dssp TSCCCCHHHHHHHHHHH--CSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCC
T ss_pred cCCCCCHHHHHHHHHHh--cCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCC
Confidence 35667778888888887 55666667777886655432 1111112222233444566789999888888775432
Q ss_pred --ccHHHHHhhhccchhhhhcchh
Q 024138 169 --PVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 169 --P~lae~F~lMsRDEARHAGFlN 190 (272)
..+.++|..+-.| +-|.|+
T Consensus 135 ~~~~~~~~~~~~D~~---~dg~i~ 155 (169)
T 3qrx_A 135 TEEELQEMIAEADRN---DDNEID 155 (169)
T ss_dssp CHHHHHHHHHHHCCS---SSSCBC
T ss_pred CHHHHHHHHHHhCCC---CCCCEe
Confidence 4577777777655 456655
No 96
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=65.20 E-value=5.2 Score=31.91 Aligned_cols=90 Identities=14% Similarity=0.128 Sum_probs=55.8
Q ss_pred cHHHHHHHHHHHhh-ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHh
Q 024138 98 NQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (272)
Q Consensus 98 ~~~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~ 176 (272)
.++|++.+.+-|+. |.|+.-.+--+||......+....-..-++-|.+.+-..=+|.|-|.|...-+... ..+.++|.
T Consensus 46 ~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~-~~l~~~F~ 124 (220)
T 3sjs_A 46 PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM-ELAYNLFV 124 (220)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-HHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-HHHHHHHH
Confidence 33444444444443 77777778778887766554322223344444455555567888888877655432 56888998
Q ss_pred hhccchhhhhcchhh
Q 024138 177 LMSRDEARHAGYECA 191 (272)
Q Consensus 177 lMsRDEARHAGFlNk 191 (272)
.+-+| +-|+|+.
T Consensus 125 ~~D~d---~~G~I~~ 136 (220)
T 3sjs_A 125 MNARA---RSGTLEP 136 (220)
T ss_dssp HHCCS---STTEECH
T ss_pred HHCCC---CCCCCcH
Confidence 88776 5677764
No 97
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=64.85 E-value=12 Score=27.75 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=17.9
Q ss_pred hhhhccchhhHHHHHHhhhhhccCccHHHHH
Q 024138 145 RSCTAEFSGFLLYKELGRRLKKTNPVVAEIF 175 (272)
Q Consensus 145 rScTAEFSGfLLYKEl~rrlk~~NP~lae~F 175 (272)
+.+-..=+|.|-|.|+.+-+. ++|.+.++|
T Consensus 154 ~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~ 183 (193)
T 1bjf_A 154 RQMDTNRDGKLSLEEFIRGAK-SDPSIVRLL 183 (193)
T ss_dssp HHSCTTCSSEECHHHHHHHHH-HCTHHHHTT
T ss_pred HHhCCCCCCeEeHHHHHHHHh-cCHHHHHHh
Confidence 344445566677777666664 456666665
No 98
>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}
Probab=64.58 E-value=8.3 Score=31.09 Aligned_cols=68 Identities=9% Similarity=-0.014 Sum_probs=60.4
Q ss_pred hcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-ccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 129 d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-P~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-.|+++.++..++.|-.-...|+.....|+-....++..+ +.+++.|.-.+-+|..||.-|-+-+.++
T Consensus 19 ~~l~~~~~~~vi~~LN~~La~e~~a~~~y~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~laErI~~L 87 (192)
T 2vxx_A 19 ILLEKATTTPICEGMNRLLASFQALYLQYQKHHFVVEGAEFYPLHQFFQDCYEQVQDHVHALGERLNGL 87 (192)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4578889999999999999999999999999999997664 6789999999999999998887766666
No 99
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=64.51 E-value=10 Score=28.05 Aligned_cols=66 Identities=17% Similarity=0.130 Sum_probs=30.5
Q ss_pred cHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 98 ~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
..++++.+++.+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-++
T Consensus 54 ~~~~~~~~f~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~ 119 (183)
T 1s6c_A 54 ASTYAHYLFNAF--DTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 119 (183)
T ss_dssp CHHHHHHHHHHH--CTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred hHHHHHHHHHHh--CCCCCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 344445555444 333334455556655444332111112223333444555567777777766554
No 100
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=64.46 E-value=5.9 Score=28.44 Aligned_cols=61 Identities=20% Similarity=0.232 Sum_probs=28.2
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC------ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
...+..++++.++.++ .--+-=+||...+... ...++..|- .+-..=+|+|-..|+.+=++
T Consensus 46 g~~~~~~~~~~~~~~~------~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~-----~~D~d~~G~I~~~el~~~l~ 112 (153)
T 2ovk_B 46 GRVPPDDELNAMLKEC------PGQLNFTAFLTLFGEKVSGTDPEDALRNAFS-----MFDEDGQGFIPEDYLKDLLE 112 (153)
T ss_dssp TSCCCHHHHHHHHHHS------SSCCCSHHHHHTTTTTTTTCCCTTHHHHHHH-----TTCSSCSSCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHc------CCCCCHHHHHHHHHHHhccCChHHHHHHHHH-----HHCCCCCCeEcHHHHHHHHH
Confidence 3345555666666554 1223334554444322 223344442 22334456666666655554
No 101
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=63.78 E-value=7.9 Score=27.09 Aligned_cols=87 Identities=18% Similarity=0.168 Sum_probs=52.7
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC----------ChHHHHHHHHHHHhhhhccchhhHHHHHHhhh
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRR 163 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l----------~~~~R~~FveFLerScTAEFSGfLLYKEl~rr 163 (272)
...+..++++.+++.+-.| ..-.+-=+||...+... ...++..| +.+-..-+|.|-..|+.+=
T Consensus 41 ~~~~~~~~~~~l~~~~d~~--~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F-----~~~D~d~~G~i~~~el~~~ 113 (153)
T 3ox6_A 41 GYMPTEMELIELSQQINMN--LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAF-----REFDTNGDGEISTSELREA 113 (153)
T ss_dssp TCCCCHHHHHHHHHHHHTT--STTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHH-----HHHCTTCSSSBCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCC--CCccCcHHHHHHHHHHHhhccccccccHHHHHHHH-----HHhCCCCCCcCcHHHHHHH
Confidence 4566777888888877444 34445556776554321 12234444 3445667899999999877
Q ss_pred hhc------cCccHHHHHhhhccchhhhhcchh
Q 024138 164 LKK------TNPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 164 lk~------~NP~lae~F~lMsRDEARHAGFlN 190 (272)
++. +...+.++|..+-.| +-|.|+
T Consensus 114 l~~~~~~~~~~~~~~~~~~~~d~~---~dg~i~ 143 (153)
T 3ox6_A 114 MRALLGHQVGHRDIEEIIRDVDLN---GDGRVD 143 (153)
T ss_dssp HHHHHSSCCCHHHHHHHHHHHCSS---SSSSBC
T ss_pred HHHHhcCCCCHHHHHHHHHHhCCC---CCCeEe
Confidence 764 234577777777555 445443
No 102
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=63.72 E-value=6.4 Score=29.86 Aligned_cols=60 Identities=18% Similarity=0.078 Sum_probs=51.8
Q ss_pred HHHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 137 ~~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+..++.|-+-...|+.....|.-.+..+++. .+.+++.|.-.+.+|..||--+-+-+.+.
T Consensus 7 ~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~l~e~i~~l 67 (161)
T 3uoi_A 7 PDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLL 67 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3478899999999999999999999999765 58899999999999999998776655554
No 103
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=63.43 E-value=9.4 Score=30.40 Aligned_cols=92 Identities=18% Similarity=0.309 Sum_probs=64.6
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhc-CChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-----Cc
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-----NP 169 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-----NP 169 (272)
...++|++.+.+.|+. .|+.-.+--+||...+.. .+......+++-+-+.+-..=+|.|-|.|...-+... ..
T Consensus 60 ~~s~~ei~~l~~~F~~-~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~ 138 (229)
T 3dd4_A 60 KFTKKELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQE 138 (229)
T ss_dssp HHHHHHHHHHHHHHHT-TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHH
T ss_pred CCCHHHHHHHHHHHHh-hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHH
Confidence 4456788888888865 456666878899887776 3444556667777777777778888888876654321 23
Q ss_pred cHHHHHhhhccchhhhhcchhh
Q 024138 170 VVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 170 ~lae~F~lMsRDEARHAGFlNk 191 (272)
.+..+|..+-.| +-|+|+.
T Consensus 139 ~l~~~F~~~D~d---~dG~Is~ 157 (229)
T 3dd4_A 139 KLNWAFNLYDIN---KDGYITK 157 (229)
T ss_dssp HHHHHHHHHCTT---CSSCCBH
T ss_pred HHHHHHHHhCCC---CCCeECH
Confidence 578888888666 5677775
No 104
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=62.76 E-value=6.5 Score=31.79 Aligned_cols=92 Identities=18% Similarity=0.268 Sum_probs=59.6
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC-ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-----Cc
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-----NP 169 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-----NP 169 (272)
...++|+..+.+.|..+ |+.-.+--+||...+..+ +.......++-+-+.+-..=+|.|-+.|+..-+... ..
T Consensus 87 ~~s~~ei~~l~~~fd~~-~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~ 165 (256)
T 2jul_A 87 KFTKKELQSLYRGFKNE-CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHE 165 (256)
T ss_dssp TSCHHHHHHHHHHHHHH-CTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHH
T ss_pred CCCHHHHHHHHHHHHhh-CCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHH
Confidence 45678889999988865 667778888898877655 222223344445555566667888887776655322 34
Q ss_pred cHHHHHhhhccchhhhhcchhh
Q 024138 170 VVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 170 ~lae~F~lMsRDEARHAGFlNk 191 (272)
.+.++|..+-.| +-|+|+.
T Consensus 166 ~l~~~F~~~D~d---~dG~I~~ 184 (256)
T 2jul_A 166 KLKWAFNLYDIN---KDGCITK 184 (256)
T ss_dssp HHHHHHHHTCCS---SSSCBCH
T ss_pred HHHHHHHHhCCC---CCCcCcH
Confidence 677888877655 4565553
No 105
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=62.67 E-value=5.8 Score=30.79 Aligned_cols=91 Identities=15% Similarity=0.141 Sum_probs=50.0
Q ss_pred cHHHHHHHHHHHhh-ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc-----cCccH
Q 024138 98 NQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVV 171 (272)
Q Consensus 98 ~~~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~-----~NP~l 171 (272)
..+|.+.+.+-|+. |.|..-.+--+||...+..+....-...++-|.+.+-..-+|.|-|.|...-+.. ....+
T Consensus 52 ~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l 131 (197)
T 3pm8_A 52 CDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVC 131 (197)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHH
Confidence 44455555555543 6777777777788777665544444445566666666666788888877543321 12367
Q ss_pred HHHHhhhccchhhhhcchhh
Q 024138 172 AEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 172 ae~F~lMsRDEARHAGFlNk 191 (272)
..+|..+-.| +-|+|+.
T Consensus 132 ~~~F~~~D~d---~~G~Is~ 148 (197)
T 3pm8_A 132 LIPFKFFDID---GNGKISV 148 (197)
T ss_dssp HHHHHHHCTT---CSSEECH
T ss_pred HHHHHHHCCC---CCCCCCH
Confidence 7888887665 5677765
No 106
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=62.66 E-value=16 Score=28.39 Aligned_cols=89 Identities=22% Similarity=0.330 Sum_probs=52.3
Q ss_pred cHHHHHHHHHHHhhccCCCCcccChhHHHHHh----------cCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhh---
Q 024138 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD----------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL--- 164 (272)
Q Consensus 98 ~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d----------~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrl--- 164 (272)
..+++..+...| |-|..-.+--+||...+. .++++.-+.+++-+.+.+-..=+|.|-|.|...-+
T Consensus 9 ~~~~l~~~F~~~--D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~ 86 (272)
T 2be4_A 9 DAAGFLQIWQHF--DADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQ 86 (272)
T ss_dssp CHHHHHHHHHHH--CTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCH
T ss_pred CHHHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhh
Confidence 345666666666 666667777777876655 34444434444333344445556777777765551
Q ss_pred -------------hccCccHHHHHhhhccchhhhhcchhh
Q 024138 165 -------------KKTNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 165 -------------k~~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
......+.++|..+-+| +-|+|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d---~~G~i~~ 123 (272)
T 2be4_A 87 EENFLLIFRREAPLDNSVEFMKIWRKYDAD---SSGYISA 123 (272)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHCTT---CCSEEEG
T ss_pred hHHHHHHHhhccCcccHHHHHHHHHHhCCC---CCCccCH
Confidence 12234577888888665 5676654
No 107
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=62.20 E-value=13 Score=29.65 Aligned_cols=83 Identities=17% Similarity=0.144 Sum_probs=47.3
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc---------
Q 024138 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT--------- 167 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~--------- 167 (272)
...++++.+++.+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-++..
T Consensus 86 ~~~~~~~~~f~~~--D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~ 163 (224)
T 1s1e_A 86 DASTYAHYLFNAF--DTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTY 163 (224)
T ss_dssp CCHHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCC
T ss_pred CcHHHHHHHHHHh--cCCCCCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCC
Confidence 3445555565555 44555567777887665543211122223333345566678999999988766432
Q ss_pred --------CccHHHHHhhhccc
Q 024138 168 --------NPVVAEIFSLMSRD 181 (272)
Q Consensus 168 --------NP~lae~F~lMsRD 181 (272)
...+.++|..+-.|
T Consensus 164 ~~~~~~~~~~~~~~~f~~~D~d 185 (224)
T 1s1e_A 164 PVLKEDTPRQHVDVFFQKMDKN 185 (224)
T ss_dssp GGGCSSSHHHHHHHHHHHHCTT
T ss_pred CCCCHhHHHHHHHHHHHHhCCC
Confidence 13467777776554
No 108
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=62.13 E-value=18 Score=26.35 Aligned_cols=75 Identities=15% Similarity=0.177 Sum_probs=50.5
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-----Ccc
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-----NPV 170 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-----NP~ 170 (272)
.+..++++.+++++ |.|..-.+--+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++.. ...
T Consensus 36 ~~~~~~~~~l~~~~--D~~~~g~i~~~eF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~el~~~l~~~g~~~~~~~ 107 (165)
T 1k94_A 36 PFSLETCRIMIAML--DRDHTGKMGFNAFKELWAAL-NAWKENFMTV-----DQDGSGTVEHHELRQAIGLMGYRLSPQT 107 (165)
T ss_dssp CCCHHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCCSBCCHHHHHHHHHHTTCCCCHHH
T ss_pred CCCHHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----CCCCCceECHHHHHHHHHHhCCCCCHHH
Confidence 45677888888877 55556667777887776654 4566666444 44568999999988777542 235
Q ss_pred HHHHHhhh
Q 024138 171 VAEIFSLM 178 (272)
Q Consensus 171 lae~F~lM 178 (272)
+.++|..+
T Consensus 108 ~~~~~~~~ 115 (165)
T 1k94_A 108 LTTIVKRY 115 (165)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 56666655
No 109
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=61.71 E-value=2.8 Score=31.63 Aligned_cols=81 Identities=15% Similarity=0.217 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhc
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS 179 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMs 179 (272)
++|..+...| |.|..-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+....+.+.++|..+-
T Consensus 48 ~~l~~~F~~~--D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~aF~~~D 125 (147)
T 1wy9_A 48 EAFKVKYMEF--DLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGKRSAILRMILMYE 125 (147)
T ss_dssp HHHHHHHTTS--CCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSSGGGGGGGGGGCC
T ss_pred HHHHHHHHHH--CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3444444433 77777788888888777665322222234444455555668899999988877665677888888776
Q ss_pred cch
Q 024138 180 RDE 182 (272)
Q Consensus 180 RDE 182 (272)
+|-
T Consensus 126 ~d~ 128 (147)
T 1wy9_A 126 EKN 128 (147)
T ss_dssp CC-
T ss_pred cCC
Confidence 653
No 110
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=61.34 E-value=7.2 Score=28.82 Aligned_cols=80 Identities=20% Similarity=0.260 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc---CccHHHHHh
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFS 176 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~---NP~lae~F~ 176 (272)
++++.+++.+ |.|..-.+--+||...+..........-+..+-+.+-..=+|.|-..|+.+-++.. ...+.++|.
T Consensus 87 ~~~~~~~~~~--D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~ 164 (191)
T 3khe_A 87 AEVDHILQSV--DFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQ 164 (191)
T ss_dssp HHHHHHHHHT--CTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCHHHHHHHHH
Confidence 3444444433 55555566666776655433211111222333344456667888888888777521 233556666
Q ss_pred hhccc
Q 024138 177 LMSRD 181 (272)
Q Consensus 177 lMsRD 181 (272)
.+..|
T Consensus 165 ~~D~~ 169 (191)
T 3khe_A 165 ECDKN 169 (191)
T ss_dssp HHCTT
T ss_pred HhCCC
Confidence 65444
No 111
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=60.80 E-value=13 Score=28.32 Aligned_cols=91 Identities=14% Similarity=0.137 Sum_probs=55.3
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc-----cCccH
Q 024138 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVV 171 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~-----~NP~l 171 (272)
...+|+..+...|-.|. +.-.+--+||...+..+..+.....++-+-+.+-..=+|.|-+.|+..-+.. ....+
T Consensus 19 ~~~~el~~~f~~~D~~~-~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~ 97 (204)
T 1jba_A 19 ADAAQLQEWYKKFLEEC-PSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL 97 (204)
T ss_dssp HHHHHHHHHHHHHHSSS-TTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred CCHHHHHHHHHHHHhhC-CCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence 34567777777664331 4556666778777776544344444555555555666777777777655532 23357
Q ss_pred HHHHhhhccchhhhhcchhh
Q 024138 172 AEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 172 ae~F~lMsRDEARHAGFlNk 191 (272)
.++|..+-+| +-|+|+.
T Consensus 98 ~~~F~~~D~d---~~G~I~~ 114 (204)
T 1jba_A 98 KWTFKIYDKD---RNGCIDR 114 (204)
T ss_dssp HHHHHHHCSS---CSSCBCH
T ss_pred HHHHHHhCCC---CCCcCcH
Confidence 7788877665 4566664
No 112
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=60.64 E-value=15 Score=25.53 Aligned_cols=89 Identities=18% Similarity=0.054 Sum_probs=49.2
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCC--hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC---
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ--GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN--- 168 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~--~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N--- 168 (272)
...+..+++..++.. |..--+--+||...+..+. ......-+..+-+.+-..=+|+|-..|+.+=++.-.
T Consensus 35 ~~~~~~~~~~~~~~~-----~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~ 109 (145)
T 2bl0_B 35 GKNPTNAELNTIKGQ-----LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDAL 109 (145)
T ss_dssp TCCCCHHHHHHHHHH-----HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCC
T ss_pred CCCCCHHHHHHHHHh-----cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCC
Confidence 445566677777766 4455566677776666542 221222222222334555678888888777665432
Q ss_pred --ccHHHHHhhhccchhhhhcchh
Q 024138 169 --PVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 169 --P~lae~F~lMsRDEARHAGFlN 190 (272)
..+.++|..+-.| +-|.|+
T Consensus 110 ~~~~~~~~~~~~d~~---~dg~i~ 130 (145)
T 2bl0_B 110 TSSEVEELMKEVSVS---GDGAIN 130 (145)
T ss_dssp CHHHHHHHHTTCCCC---TTSEEE
T ss_pred CHHHHHHHHHHcCCC---CCCcEe
Confidence 3466667666544 345444
No 113
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=60.27 E-value=18 Score=27.91 Aligned_cols=87 Identities=14% Similarity=0.210 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHH------HHHHHHHhhhhccchhhHHHHHHhhhhhc-------
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQ------IFVEFLERSCTAEFSGFLLYKELGRRLKK------- 166 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~------~FveFLerScTAEFSGfLLYKEl~rrlk~------- 166 (272)
+++..+...| |-|..-.+--+||...+..+-...-. ..++-|.+.+-..=+|.|-|.|...-+..
T Consensus 16 ~~l~~~F~~~--D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~ 93 (263)
T 2f33_A 16 SQFFEIWLHF--DADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLL 93 (263)
T ss_dssp HHHHHHHHHH--CTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCTTHHHH
T ss_pred HHHHHHHHHh--CCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhhhHHHH
Confidence 3444444444 44455555555665544433111110 22333333444445666777766554422
Q ss_pred -------cCccHHHHHhhhccchhhhhcchhh
Q 024138 167 -------TNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 167 -------~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
....+.++|..+-+| +-|+|+.
T Consensus 94 ~~~~~~~~~~~l~~~F~~~D~d---~~G~i~~ 122 (263)
T 2f33_A 94 FRCQQLKSCEEFMKTWRKYDTD---HSGFIET 122 (263)
T ss_dssp HGGGTSSCHHHHHHHHTTSSTT---TCSSBCH
T ss_pred HHHhhccHHHHHHHHHHHHCCC---CCCCcCH
Confidence 234677889888666 6677664
No 114
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=60.15 E-value=18 Score=27.29 Aligned_cols=87 Identities=14% Similarity=0.162 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-----------
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN----------- 168 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N----------- 168 (272)
++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+=++...
T Consensus 52 ~~~~~~f~~~--D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~ 129 (198)
T 2r2i_A 52 KYVEQMFETF--DFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTA 129 (198)
T ss_dssp HHHHHHHHHH--CTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCH
T ss_pred HHHHHHHHHH--CCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhH
Confidence 4577777766 555556677778877666543222222233344455667789999999887665321
Q ss_pred -ccHHHHHhhhccchhhhhcchhh
Q 024138 169 -PVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 169 -P~lae~F~lMsRDEARHAGFlNk 191 (272)
..+.++|..+-.| +-|.|+.
T Consensus 130 ~~~~~~~f~~~D~d---~dG~I~~ 150 (198)
T 2r2i_A 130 EEFTNMVFDKIDIN---GDGELSL 150 (198)
T ss_dssp HHHHHHHHHHHCTT---CSSEECH
T ss_pred HHHHHHHHHHhCCC---CCCcCcH
Confidence 2367777777555 4566653
No 115
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=59.66 E-value=9.6 Score=27.27 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=46.7
Q ss_pred cc--CCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-------CccHHHHHhhhccch
Q 024138 112 DY--NQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-------NPVVAEIFSLMSRDE 182 (272)
Q Consensus 112 Dy--Nr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-------NP~lae~F~lMsRDE 182 (272)
|. |+.-.+--+||...+..+-...-..-++-| +.+-..=+|.|-|.|...-+... ...+.++|..+-+|
T Consensus 19 D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d- 96 (156)
T 1wdc_C 19 DFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDRE- 96 (156)
T ss_dssp HHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSS-
T ss_pred ccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCC-
Confidence 55 666677777887776654322222334555 66656667777777766554322 24678888887666
Q ss_pred hhhhcchhh
Q 024138 183 ARHAGYECA 191 (272)
Q Consensus 183 ARHAGFlNk 191 (272)
+-|+|+.
T Consensus 97 --~~G~I~~ 103 (156)
T 1wdc_C 97 --GQGFISG 103 (156)
T ss_dssp --SSSEEEH
T ss_pred --CCCcCcH
Confidence 5677765
No 116
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=59.58 E-value=14 Score=28.54 Aligned_cols=86 Identities=16% Similarity=0.184 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-----------
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN----------- 168 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N----------- 168 (272)
++++.+++.+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-++...
T Consensus 57 ~~~~~~f~~~--D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~ 134 (211)
T 2ggz_A 57 KHIDQVYNTF--DTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPE 134 (211)
T ss_dssp HHHHHHHHHH--CTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHH
T ss_pred HHHHHHHHHH--cCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHH
Confidence 4577777766 556666677778877665432222222333444555667789999999987665421
Q ss_pred ccHHHHHhhhccchhhhhcchh
Q 024138 169 PVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 169 P~lae~F~lMsRDEARHAGFlN 190 (272)
..+.++|..+-.| +-|.|+
T Consensus 135 ~~~~~~f~~~D~d---~dG~I~ 153 (211)
T 2ggz_A 135 EFINLVFHKIDIN---NDGELT 153 (211)
T ss_dssp HHHHHHHHHHCTT---CSSSBC
T ss_pred HHHHHHHHHhCCC---CCCCCc
Confidence 2366777776554 446554
No 117
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=58.72 E-value=11 Score=28.71 Aligned_cols=59 Identities=17% Similarity=0.067 Sum_probs=51.8
Q ss_pred HHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 138 ~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
..++.|-+-...|+.....|.-....++.. .+.+++.|.-.+-+|..||--|-+-+.++
T Consensus 6 ~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~l~eri~~l 65 (161)
T 3gvy_A 6 KVIEYLNAALRSELTAVSQYWLHYRLQEDWGFGSIAHKSRKESIEEMHHADKLIQRIIFL 65 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 468889999999999999999999999765 58999999999999999998877766655
No 118
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=57.76 E-value=23 Score=23.29 Aligned_cols=71 Identities=17% Similarity=0.262 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHH
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAE 173 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae 173 (272)
+++..+...+ |.|..-++--+||...+..+. ..-..-++-+.+.+-..=+|.|-|.|...-++.....+.+
T Consensus 11 ~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~~~ 81 (86)
T 2opo_A 11 ADRERIFKRF--DTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRGLVKD 81 (86)
T ss_dssp HHHHHHHHHH--CTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTTTHHH
T ss_pred HHHHHHHHHH--CCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCccHHHH
Confidence 3444444444 777777787888887776654 2223335555555656668888888887777544333333
No 119
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=57.55 E-value=29 Score=25.39 Aligned_cols=75 Identities=23% Similarity=0.266 Sum_probs=51.4
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-----cc
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-----PV 170 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-----P~ 170 (272)
.+..++++.+++++ |.|..-.+--+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++..+ ..
T Consensus 38 ~~~~~~~~~l~~~~--D~~~~g~i~~~eF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~el~~~l~~~g~~~~~~~ 109 (167)
T 1gjy_A 38 PFNLETCRLMVSML--DRDMSGTMGFNEFKELWAVL-NGWRQHFISF-----DSDRSGTVDPQELQKALTTMGFRLNPQT 109 (167)
T ss_dssp CCCHHHHHHHHHHH--CTTCCSCBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCCSEECHHHHHHHHHTTTCCCCHHH
T ss_pred CcCHHHHHHHHHHH--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----CCCCCCcCCHHHHHHHHHHcCCCCCHHH
Confidence 45677888888887 55555667778887777654 4566666544 556689999999988776432 35
Q ss_pred HHHHHhhh
Q 024138 171 VAEIFSLM 178 (272)
Q Consensus 171 lae~F~lM 178 (272)
+.++|..+
T Consensus 110 ~~~~~~~~ 117 (167)
T 1gjy_A 110 VNSIAKRY 117 (167)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 56666655
No 120
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=56.93 E-value=17 Score=26.19 Aligned_cols=87 Identities=18% Similarity=0.257 Sum_probs=53.2
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC------ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
...+..+|++.|++++ |.|..-.+-=+||...+... ..++++.|--| -..=+|+|-..||.+=++.-
T Consensus 36 g~~~~~~~~~~~~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~~~ 108 (143)
T 2obh_A 36 GFEPKKEEIKKMISEI--DKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLF-----DDDETGKISFKNLKRVAKEL 108 (143)
T ss_dssp TCCCCHHHHHHHHHHH--TTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CTTCSSSBCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHh-----CCCCCCcCcHHHHHHHHHHh
Confidence 4456778888888887 55555566667886554432 12455555443 45568999999988776532
Q ss_pred -----CccHHHHHhhhccchhhhhcchh
Q 024138 168 -----NPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 168 -----NP~lae~F~lMsRDEARHAGFlN 190 (272)
...+.++|..+-.| +-|.|+
T Consensus 109 g~~~~~~~~~~~~~~~D~d---~dG~I~ 133 (143)
T 2obh_A 109 GENLTDEELQEMIDEADRD---GDGEVS 133 (143)
T ss_dssp TCCCCHHHHHHHHHHHCTT---SSSSBC
T ss_pred CCCCCHHHHHHHHHHhCCC---CCCcEe
Confidence 23456666555443 345444
No 121
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=56.86 E-value=17 Score=26.73 Aligned_cols=77 Identities=18% Similarity=0.218 Sum_probs=44.2
Q ss_pred ccCCCCcccChhHHHHHhcC-----------ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc-----cCccHHHHH
Q 024138 112 DYNQTHFVRNKEFKEAADKM-----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVVAEIF 175 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l-----------~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~-----~NP~lae~F 175 (272)
|.|..-.+--+||...+..+ ....-...++-+-+.+-..=+|.|-|.|...-+.. ....+.++|
T Consensus 50 D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F 129 (191)
T 3khe_A 50 DNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAF 129 (191)
T ss_dssp CTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 44444455555554444433 22233344555556666666787777777654421 124678899
Q ss_pred hhhccchhhhhcchhh
Q 024138 176 SLMSRDEARHAGYECA 191 (272)
Q Consensus 176 ~lMsRDEARHAGFlNk 191 (272)
..+-.| +-|+|+.
T Consensus 130 ~~~D~d---~~G~I~~ 142 (191)
T 3khe_A 130 QQFDSD---GSGKITN 142 (191)
T ss_dssp HHHCTT---CSSEECH
T ss_pred HHHCCC---CcCcCCH
Confidence 988666 6788765
No 122
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=56.27 E-value=18 Score=26.18 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=23.5
Q ss_pred hhhHHHHHHhhhhhc------cCccHHHHHhhhccchhhhhcchhh
Q 024138 152 SGFLLYKELGRRLKK------TNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 152 SGfLLYKEl~rrlk~------~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
+|.|-|.|...-+.. ....+.++|..+-+| +-|+|+.
T Consensus 72 dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d---~~G~I~~ 114 (166)
T 2mys_B 72 SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPD---GKGSIKK 114 (166)
T ss_pred CCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCC---CCcceeH
Confidence 677777766544432 124577888887666 5677765
No 123
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=56.07 E-value=33 Score=24.99 Aligned_cols=71 Identities=14% Similarity=0.173 Sum_probs=34.3
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC-ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~ 166 (272)
...+..++++.+++.+ |.|..-.+--+||...+... .......-+.-+-+.+-..=+|.|-..|+.+-++.
T Consensus 41 ~~~~~~~~~~~l~~~~--D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~ 112 (179)
T 2f2o_A 41 GQNPTEAELQDMINEV--DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112 (179)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh--ccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3444556666666655 44444455555665544322 11111111112223334455777777777766643
No 124
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=56.02 E-value=24 Score=26.06 Aligned_cols=64 Identities=14% Similarity=0.092 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
++++.+++.+ |-|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+..=++
T Consensus 63 ~~~~~~f~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~ 126 (193)
T 1bjf_A 63 KFAEHVFRTF--DANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQ 126 (193)
T ss_dssp HHHHHHHHHH--CSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHH
Confidence 3444444444 455555666667766555442222222233333445566688888888776553
No 125
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=56.01 E-value=4.6 Score=26.28 Aligned_cols=62 Identities=16% Similarity=0.213 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
++..+...+ |.|..-++--+||...+..+. ..-..-++-+.+.+-..=+|.|-|.|...-++
T Consensus 4 ~l~~~F~~~--D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 65 (78)
T 1k9u_A 4 DMERIFKRF--DTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCN 65 (78)
T ss_dssp HHHHHHHHH--CTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHH--CCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 344444433 444444455555544433221 11111233344445555577777777776664
No 126
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=55.84 E-value=11 Score=26.86 Aligned_cols=98 Identities=17% Similarity=0.316 Sum_probs=62.1
Q ss_pred hHHHhhhhcccccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC------ChHHHHHHHHHHHhhhhccchhhH
Q 024138 82 FDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFL 155 (272)
Q Consensus 82 Fd~m~~lf~~eid~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~R~~FveFLerScTAEFSGfL 155 (272)
.+++.+++.. +...+..++++.++..+ |.|..-.+-=+||...+... ....+..| +.+-..=+|+|
T Consensus 42 ~~e~~~~l~~-~~~~~~~~~~~~l~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F-----~~~D~d~~G~i 113 (161)
T 3fwb_A 42 YHELKVAMKA-LGFELPKREILDLIDEY--DSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAF-----QLFDDDHTGKI 113 (161)
T ss_dssp HHHHHHHHHH-TTCCCCHHHHHHHHHHH--CTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHH-----HHHCTTCSSEE
T ss_pred HHHHHHHHHH-cCCCCCHHHHHHHHHHh--CcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHH-----HHHcCCCCCeE
Confidence 4444443332 46677888999999887 45555567677886665432 22334444 34456678999
Q ss_pred HHHHHhhhhhc-----cCccHHHHHhhhccchhhhhcchh
Q 024138 156 LYKELGRRLKK-----TNPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 156 LYKEl~rrlk~-----~NP~lae~F~lMsRDEARHAGFlN 190 (272)
-..|+.+=++. +...+.++|..+..| +-|.|+
T Consensus 114 ~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~---~~g~i~ 150 (161)
T 3fwb_A 114 SIKNLRRVAKELGETLTDEELRAMIEEFDLD---GDGEIN 150 (161)
T ss_dssp CHHHHHHHHHHTTCCCCHHHHHHHHHTTCSS---SSSSEE
T ss_pred eHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC---CCCcCc
Confidence 99998887753 234678888887666 456655
No 127
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=55.79 E-value=21 Score=25.84 Aligned_cols=33 Identities=9% Similarity=0.100 Sum_probs=18.7
Q ss_pred hccchhhHHHHHHhhhhhccC-----ccHHHHHhhhcc
Q 024138 148 TAEFSGFLLYKELGRRLKKTN-----PVVAEIFSLMSR 180 (272)
Q Consensus 148 TAEFSGfLLYKEl~rrlk~~N-----P~lae~F~lMsR 180 (272)
-..=+|+|-..|+.+-++.-+ ..+.++|..+-.
T Consensus 105 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~ 142 (166)
T 2mys_B 105 DPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPP 142 (166)
T ss_pred CCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCC
Confidence 445567777777766664332 245566655533
No 128
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=55.71 E-value=23 Score=25.18 Aligned_cols=86 Identities=16% Similarity=0.153 Sum_probs=49.7
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCC----hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN- 168 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~----~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N- 168 (272)
...+..++++.++..+ |.|..-.+--+||...+.... ......-+.-+-+.+-..=+|.|-..|+.+=++..+
T Consensus 49 ~~~~~~~~~~~~~~~~--D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~ 126 (161)
T 1dtl_A 49 GQNPTPEELQEMIDEV--DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGE 126 (161)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC
Confidence 4455667777777766 555666677778866554321 111111122233444566789999999988876433
Q ss_pred ----ccHHHHHhhhccc
Q 024138 169 ----PVVAEIFSLMSRD 181 (272)
Q Consensus 169 ----P~lae~F~lMsRD 181 (272)
..+.++|..+-.|
T Consensus 127 ~~~~~~~~~~~~~~D~d 143 (161)
T 1dtl_A 127 TITEDDIEELMKDGDKN 143 (161)
T ss_dssp CCCHHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHHHhCCC
Confidence 2456666665443
No 129
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=55.45 E-value=8 Score=27.17 Aligned_cols=83 Identities=11% Similarity=0.285 Sum_probs=42.3
Q ss_pred HHHHHHHHHhh-ccCCCCcccChhHHHHHhcCChH-HHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc------CccHH
Q 024138 101 EFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPVVA 172 (272)
Q Consensus 101 E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~-~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~------NP~la 172 (272)
|++.+.+-|+. |.|+.-.+--+||...+..+... ..+.....+.. -+|.|-|.|...-+... ...+.
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-----~~g~i~~~eF~~~~~~~~~~~~~~~~l~ 79 (143)
T 3j04_B 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE-----APGPINFTMFLTMFGEKLNGTDPEDVIR 79 (143)
T ss_dssp HHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT-----SSSCCCHHHHHHHHHHTTTSSCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh-----CCCCcCHHHHHHHHHHHhccCCcHHHHH
Confidence 44444444432 55666666666665555443211 12222222211 46666666655444321 23577
Q ss_pred HHHhhhccchhhhhcchhh
Q 024138 173 EIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 173 e~F~lMsRDEARHAGFlNk 191 (272)
++|..+-+| +-|+|+.
T Consensus 80 ~~F~~~D~d---~~G~I~~ 95 (143)
T 3j04_B 80 NAFACFDEE---ASGFIHE 95 (143)
T ss_dssp HHHTTSCSS---SCCCCCT
T ss_pred HHHHHHCCC---CCCeEcH
Confidence 888887666 5677765
No 130
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=55.29 E-value=20 Score=27.44 Aligned_cols=73 Identities=10% Similarity=0.198 Sum_probs=36.1
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc------CccHHHHHhhhccchhhh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPVVAEIFSLMSRDEARH 185 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~------NP~lae~F~lMsRDEARH 185 (272)
|.|..-.+--.||...+..+....-..-+.-|.+.+ +|.|-|.|...-+... ...+..+|..+-+| +
T Consensus 67 D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d---~ 139 (196)
T 3dtp_E 67 DQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEG---D 139 (196)
T ss_dssp CCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHHHHHHTTCSS---S
T ss_pred CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHHHHHHHHCCC---C
Confidence 444444555555555544432111111122222222 7777777765544321 23577788877665 5
Q ss_pred hcchhh
Q 024138 186 AGYECA 191 (272)
Q Consensus 186 AGFlNk 191 (272)
-|+|+.
T Consensus 140 ~G~Is~ 145 (196)
T 3dtp_E 140 GKCKEE 145 (196)
T ss_dssp SCCBHH
T ss_pred CCcCcH
Confidence 577654
No 131
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=55.24 E-value=28 Score=26.89 Aligned_cols=77 Identities=18% Similarity=0.294 Sum_probs=50.9
Q ss_pred ccCCCCcccChhHHHHHh--------cCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc-------------cCcc
Q 024138 112 DYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-------------TNPV 170 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d--------~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~-------------~NP~ 170 (272)
|.|..-++--+||...+. .++++.-+.+++-+.+.+-..=+|.|-|.|...-+.. ....
T Consensus 113 D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~ 192 (263)
T 2f33_A 113 DTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKE 192 (263)
T ss_dssp STTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHHHHHHTCCCHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHHHhcCcchHHHH
Confidence 666677777778876654 3344444445565666776677888888888765532 1245
Q ss_pred HHHHHhhhccchhhhhcchhh
Q 024138 171 VAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 171 lae~F~lMsRDEARHAGFlNk 191 (272)
+.++|..+-+| +-|+|+.
T Consensus 193 ~~~~F~~~D~d---~~G~is~ 210 (263)
T 2f33_A 193 FNKAFELYDQD---GNGYIDE 210 (263)
T ss_dssp HHHHHHHHCCS---SSSCEEH
T ss_pred HHHHHHHhCCC---CCCcccH
Confidence 77888888766 5677765
No 132
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=55.04 E-value=28 Score=27.15 Aligned_cols=94 Identities=16% Similarity=0.233 Sum_probs=54.4
Q ss_pred cccHHHHHHHHHH-------Hh-hccCCCCcccChhHHHHHhcC----ChHHHHHHHHHHHhhhhccchhhHHHHHHhhh
Q 024138 96 KLNQAEFEALLQE-------FK-TDYNQTHFVRNKEFKEAADKM----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRR 163 (272)
Q Consensus 96 ~~~~~E~~Aml~E-------fr-~DyNr~HFvR~~eF~~~~d~l----~~~~R~~FveFLerScTAEFSGfLLYKEl~rr 163 (272)
...-+||.+++.. |+ -| |..-++--+|+..++..+ ....-..-++-+.+-+. .=.|.|-|.|..+-
T Consensus 62 ~I~f~EF~~~~~~~~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~ 139 (174)
T 2i7a_A 62 RLDQEEFARLWKRLVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCF 139 (174)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHH
Confidence 3455666655432 22 28 888888888998887776 22111222222333333 34777777776655
Q ss_pred hhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 164 LKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 164 lk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+.. .+.+.++|..+-+| .-| |.....+|
T Consensus 140 ~~~-~~~~~~~F~~~D~d---~~G-I~~~~~Ef 167 (174)
T 2i7a_A 140 LMR-LEAMAKTFRNLSKD---GKG-LYLTEMEW 167 (174)
T ss_dssp HHH-HHHHHHHHHHHCSS---SSC-CCCCHHHH
T ss_pred HHH-HHHHHHHHHHhCCC---CCC-ceecHHHH
Confidence 542 26788888888776 346 65544443
No 133
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=54.51 E-value=16 Score=29.00 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=42.9
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc-----------------cCccHHHH
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----------------TNPVVAEI 174 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~-----------------~NP~lae~ 174 (272)
|.|..-.+--+||...+..+.......-+..+-+.+-..=+|+|-+.|+.+-++. ....+.++
T Consensus 112 D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (229)
T 3dd4_A 112 DTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETF 191 (229)
T ss_dssp CSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHH
T ss_pred CCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHH
Confidence 5555556666778766654432222333344445556667899999998876653 23567777
Q ss_pred Hhhhccc
Q 024138 175 FSLMSRD 181 (272)
Q Consensus 175 F~lMsRD 181 (272)
|..+-.|
T Consensus 192 f~~~D~d 198 (229)
T 3dd4_A 192 FQKMDKN 198 (229)
T ss_dssp HHHHCSS
T ss_pred HHHhcCC
Confidence 7777655
No 134
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=54.41 E-value=17 Score=27.51 Aligned_cols=91 Identities=23% Similarity=0.262 Sum_probs=54.3
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChH-HHHHHHHHHHhhhhccchhhHHHHHHhhhhhc-----cCcc
Q 024138 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPV 170 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~-~R~~FveFLerScTAEFSGfLLYKEl~rrlk~-----~NP~ 170 (272)
..++|++.+.+.|..|. ..-.+--+||...+..+-+. .-...+.-+-+.+-..=+|.|-+.|+..-+.. ....
T Consensus 30 ~~~~~i~~~f~~~d~~~-~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~ 108 (207)
T 2d8n_A 30 FSEEELCSWYQSFLKDC-PTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQK 108 (207)
T ss_dssp CCHHHHHHHHHHHHHHC-TTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTT
T ss_pred CCHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHH
Confidence 35667777777776552 34456667777766655211 11123333344445556788888877665532 2447
Q ss_pred HHHHHhhhccchhhhhcchhh
Q 024138 171 VAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 171 lae~F~lMsRDEARHAGFlNk 191 (272)
+.++|..+-+| +-|.|+.
T Consensus 109 ~~~~f~~~D~d---~~G~I~~ 126 (207)
T 2d8n_A 109 LEWAFSLYDVD---GNGTISK 126 (207)
T ss_dssp HHHHHHHHCTT---CSSEECH
T ss_pred HHHHHHHhcCC---CCCeEcH
Confidence 88889887766 5677665
No 135
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=54.19 E-value=15 Score=28.14 Aligned_cols=82 Identities=10% Similarity=-0.036 Sum_probs=43.1
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC-C-----hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-Q-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~-----~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
...+..+++..|+.++ .-.+-=++|...+..+ . ..++..| +.+-..=+|+|-..||.+=+ .-
T Consensus 87 g~~~~~~~~~~l~~~~------~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F-----~~~D~d~~G~Is~~El~~~l-~~ 154 (196)
T 3dtp_E 87 GRLCTEQELDSMVAEA------PGPINFTMFLTIFGDRIAGTDEEDVIVNAF-----NLFDEGDGKCKEETLKRSLT-TW 154 (196)
T ss_dssp SCCCCHHHHHHHHTTS------SSCCBHHHHHHHHHHCCCSSCCHHHHHHHH-----HTTCSSSSCCBHHHHHHHHH-HS
T ss_pred CCCCCHHHHHHHHHHc------cCCCcHHHHHHHHHHHhcCCCcHHHHHHHH-----HHHCCCCCCcCcHHHHHHHH-Hc
Confidence 4455666666666655 2234445565554432 1 2333443 23344556777777777666 33
Q ss_pred C-----ccHHHHHhhhccchhhhhcchh
Q 024138 168 N-----PVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 168 N-----P~lae~F~lMsRDEARHAGFlN 190 (272)
+ ..+.++|..+-.| +-|.|+
T Consensus 155 g~~~~~~~~~~l~~~~D~d---~dG~I~ 179 (196)
T 3dtp_E 155 GEKFSQDEVDQALSEAPID---GNGLID 179 (196)
T ss_dssp SSCCCHHHHHHHHHSSCEE---TTEECH
T ss_pred CCCCCHHHHHHHHHHcCCC---CCCEEe
Confidence 2 3456666666554 345544
No 136
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=53.63 E-value=7.9 Score=29.43 Aligned_cols=61 Identities=18% Similarity=0.133 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhhccCCCCcccChhHHHHHhcC-----ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc
Q 024138 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (272)
Q Consensus 99 ~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-----~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~ 166 (272)
.++++.+++.+ |.|..-.+--+||...+..+ ..+.+..|- .+-..=+|.|-+.|+.+-++.
T Consensus 70 ~~~~~~~f~~~--D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~-----~~D~d~~G~I~~~E~~~~l~~ 135 (207)
T 2d8n_A 70 KAYAQHVFRSF--DSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFS-----LYDVDGNGTISKNEVLEIVMA 135 (207)
T ss_dssp HHHHHHHHHHH--CTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHHH-----HHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHh--cCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHH-----HhcCCCCCeEcHHHHHHHHHH
Confidence 34455555544 44555566666776655433 234455544 334556899999988876653
No 137
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=53.56 E-value=2 Score=35.29 Aligned_cols=20 Identities=35% Similarity=0.773 Sum_probs=19.0
Q ss_pred cchhHHHHHHhHHhhCCCCC
Q 024138 218 IGYWRYITIYRHLKANPDSS 237 (272)
Q Consensus 218 IGYwRYItIyRHLe~nPe~r 237 (272)
|-|.||++++-.|.+|||++
T Consensus 63 ilymRy~~L~~kIpkHpdyk 82 (144)
T 2a9u_A 63 VLYMKYVTVYNLIKKRPDFK 82 (144)
T ss_dssp HHHHHHHHHHHHHTTSHHHH
T ss_pred HHHHHHHHHHHHHhcCcchh
Confidence 67999999999999999998
No 138
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=53.44 E-value=11 Score=27.66 Aligned_cols=56 Identities=14% Similarity=0.234 Sum_probs=37.8
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
|.|..-++--+||...+..+...+-..-++-+.+.+-..=+|.|-|.|..+-+...
T Consensus 94 D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 94 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp CTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence 77888888888898877765433333344555556666678999999988877543
No 139
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=53.42 E-value=14 Score=27.62 Aligned_cols=77 Identities=25% Similarity=0.250 Sum_probs=49.1
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-----ccHHHHHhhhccchhhhh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-----PVVAEIFSLMSRDEARHA 186 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-----P~lae~F~lMsRDEARHA 186 (272)
|-|..-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+.... ..+.++|..+-+| +-
T Consensus 47 D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d---~~ 123 (204)
T 3e3r_A 47 DRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRS---GD 123 (204)
T ss_dssp CTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTT---CS
T ss_pred ccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcC---CC
Confidence 556666666677776666553333333444455555556678888888877665332 2578889888666 67
Q ss_pred cchhh
Q 024138 187 GYECA 191 (272)
Q Consensus 187 GFlNk 191 (272)
|+|+.
T Consensus 124 G~I~~ 128 (204)
T 3e3r_A 124 GVVTV 128 (204)
T ss_dssp SEECH
T ss_pred CeEeH
Confidence 88765
No 140
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=53.34 E-value=13 Score=26.55 Aligned_cols=13 Identities=23% Similarity=0.266 Sum_probs=6.0
Q ss_pred ccHHHHHHHHHHH
Q 024138 97 LNQAEFEALLQEF 109 (272)
Q Consensus 97 ~~~~E~~Aml~Ef 109 (272)
..-+||-+++...
T Consensus 63 i~~~eF~~~~~~~ 75 (156)
T 1wdc_C 63 LPFEEFLPAYEGL 75 (156)
T ss_dssp ECHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHH
Confidence 3444555444443
No 141
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=53.25 E-value=7.4 Score=32.93 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=56.8
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchh-hHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcch
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYE 189 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSG-fLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFl 189 (272)
.|||.-|.--+-|=+.+..++. -++-|..+-..|-.- --.|...++.-++. .|.|+.+|.-.|..|..||.-.
T Consensus 3 ~~~~~~~~~~~~~f~~~~~i~~-----T~eNL~~A~~GE~~E~~~~Y~~fA~~A~~EG~~~IA~~F~~~A~~E~~HA~r~ 77 (179)
T 3qhb_A 3 NYNQEDFMGLDRFFQDAVSHNN-----TDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLL 77 (179)
T ss_dssp SSCCCCGGGGGGGCCCCCCCSS-----HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHhHHHHHHHhcccCc-----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 5888888776665444444544 356777777777666 23566555555554 8999999999999999999876
Q ss_pred hhhhhhh
Q 024138 190 CASKSVM 196 (272)
Q Consensus 190 Nkal~Df 196 (272)
-+.|..+
T Consensus 78 ~kll~~l 84 (179)
T 3qhb_A 78 TKLYSEL 84 (179)
T ss_dssp HHHSTTC
T ss_pred HHHHhcc
Confidence 6666543
No 142
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=53.07 E-value=5.3 Score=32.33 Aligned_cols=20 Identities=35% Similarity=0.599 Sum_probs=18.6
Q ss_pred cchhHHHHHH-hHHhhCCCCC
Q 024138 218 IGYWRYITIY-RHLKANPDSS 237 (272)
Q Consensus 218 IGYwRYItIy-RHLe~nPe~r 237 (272)
|-|.||++|+ ..|-+|||++
T Consensus 61 ily~R~~~L~~e~IpkHpdy~ 81 (146)
T 2xze_A 61 ILYNKYITLFIEKLPKHRDYK 81 (146)
T ss_dssp HHHHHHHHHHHTTGGGSTTTT
T ss_pred HHHHHHHHHHHHHcccCccch
Confidence 6799999999 6999999998
No 143
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=52.85 E-value=9.4 Score=30.54 Aligned_cols=57 Identities=16% Similarity=0.072 Sum_probs=43.7
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSV 195 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~D 195 (272)
-++.|...-..|...---|-=.++.-++ -.|.|+++|.-.|.+|..||.-+=+-|.+
T Consensus 13 t~~nL~~afagEs~A~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~ 70 (144)
T 4di0_A 13 TEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEA 70 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4677888888888887777655555544 48999999999999999999855454543
No 144
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=52.42 E-value=9.8 Score=29.30 Aligned_cols=55 Identities=18% Similarity=0.138 Sum_probs=48.5
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASK 193 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal 193 (272)
.++.|......|+..--.|--.++..++. -|.+++.|.--|.+|..||.-+=+-+
T Consensus 9 ~~~~Ln~a~~~E~~A~~~Y~~~A~~a~~~g~~~~a~~f~~~A~eE~~HA~~~~~~l 64 (144)
T 1j30_A 9 TAENLKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFI 64 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999988765 59999999999999999997665533
No 145
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=52.39 E-value=12 Score=27.65 Aligned_cols=17 Identities=12% Similarity=0.241 Sum_probs=9.0
Q ss_pred hccchhhHHHHHHhhhh
Q 024138 148 TAEFSGFLLYKELGRRL 164 (272)
Q Consensus 148 TAEFSGfLLYKEl~rrl 164 (272)
-..=+|.|-+.|+.+=+
T Consensus 109 D~d~~G~i~~~e~~~~l 125 (190)
T 1g8i_A 109 DLDNDGYITRNEMLDIV 125 (190)
T ss_dssp CTTCSSEEEHHHHHHHH
T ss_pred cCCCCCeECHHHHHHHH
Confidence 33445666666655544
No 146
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=52.35 E-value=7.2 Score=37.67 Aligned_cols=100 Identities=14% Similarity=0.217 Sum_probs=40.4
Q ss_pred hHHHhhhhcccccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC--ChHHHHHHHHHHHhhhhccchhhHHHHH
Q 024138 82 FDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM--QGPLRQIFVEFLERSCTAEFSGFLLYKE 159 (272)
Q Consensus 82 Fd~m~~lf~~eid~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l--~~~~R~~FveFLerScTAEFSGfLLYKE 159 (272)
++++.+++. .++.....+|++.|++++- -|..-.+--+||...+..+ .++++++|-.|=. . +|++-+.|
T Consensus 30 ~~El~~~l~-~lg~~~s~~el~~lf~~~D--~d~~G~I~f~EF~~~~~~l~~~~el~~aF~~fD~-----~-~G~Is~~E 100 (624)
T 1djx_A 30 FKELKDFLK-ELNIQVDDGYARKIFRECD--HSQTDSLEDEEIETFYKMLTQRAEIDRAFEEAAG-----S-AETLSVER 100 (624)
T ss_dssp -----------------------------------------CTTHHHHHHTCCHHHHHHHHHHHT-----T-SSSEEHHH
T ss_pred HHHHHHHHH-HcCCCCCHHHHHHHHHHhC--CCCCCeEeHHHHHHHHHHhccHHHHHHHHHHhcC-----C-CCeecHHH
Confidence 444444332 1355666788999999874 4444567777887665543 5678999988742 3 79999999
Q ss_pred Hhhhhhcc-C------ccHHHHHhhhccc-hhhhhcchh
Q 024138 160 LGRRLKKT-N------PVVAEIFSLMSRD-EARHAGYEC 190 (272)
Q Consensus 160 l~rrlk~~-N------P~lae~F~lMsRD-EARHAGFlN 190 (272)
|.+=|++. . ..+.+++.-.-.| ++++.|.|+
T Consensus 101 L~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is 139 (624)
T 1djx_A 101 LVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMT 139 (624)
T ss_dssp HHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEEC
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCC
Confidence 98887642 1 2356666665555 344556544
No 147
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=51.88 E-value=9.9 Score=29.22 Aligned_cols=81 Identities=19% Similarity=0.323 Sum_probs=46.4
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCC-----hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT- 167 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-----~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~- 167 (272)
...+..++++.+++.+ |-|..-.+--+||...+..+. ..++..|-.| -..=+|+|-..|+.+=++.-
T Consensus 40 g~~~~~~~~~~l~~~~--D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~-----D~d~dG~Is~~El~~~l~~~g 112 (188)
T 1s6i_A 40 GSELMESEIKDLMDAA--DIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYF-----DKDGSGYITLDEIQQACKDFG 112 (188)
T ss_dssp TCCCCHHHHHHHHHHT--CTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHT-----TTTCSSEEEHHHHHHTTTTTT
T ss_pred CCCCCHHHHHHHHHHc--CCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHH-----CCCCCCcCcHHHHHHHHHHcC
Confidence 3344556677776665 344444455566766554442 2455555443 44567888888887766532
Q ss_pred --CccHHHHHhhhccc
Q 024138 168 --NPVVAEIFSLMSRD 181 (272)
Q Consensus 168 --NP~lae~F~lMsRD 181 (272)
...+.++|..+-.|
T Consensus 113 ~~~~~~~~~~~~~D~d 128 (188)
T 1s6i_A 113 LDDIHIDDMIKEIDQD 128 (188)
T ss_dssp CCTTHHHHHHHHHCSS
T ss_pred CCHHHHHHHHHHHCCC
Confidence 24566666665444
No 148
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=51.55 E-value=14 Score=26.04 Aligned_cols=71 Identities=14% Similarity=0.212 Sum_probs=38.0
Q ss_pred ccCCCCcccChhHHHHHhcC--ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC------ccHHHHHhhhccchh
Q 024138 112 DYNQTHFVRNKEFKEAADKM--QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------PVVAEIFSLMSRDEA 183 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l--~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N------P~lae~F~lMsRDEA 183 (272)
|.|+.-.+--+|| ..+..+ .++.++ +.+.+-..=+|.|-|.|...-+.... ..+.++|..+-+|
T Consensus 16 D~d~~G~i~~~el-~~l~~~~~~~~~~~-----~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d-- 87 (155)
T 3ll8_B 16 DLDNSGSLSVEEF-MSLPELQQNPLVQR-----VIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMD-- 87 (155)
T ss_dssp CTTCSSSBCHHHH-TTSGGGTTCTTHHH-----HHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTT--
T ss_pred CcCCCCeEcHHHH-HHhhccccchHHHH-----HHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCC--
Confidence 5666666666666 332222 223333 33334445567777777665554321 4567777777655
Q ss_pred hhhcchhh
Q 024138 184 RHAGYECA 191 (272)
Q Consensus 184 RHAGFlNk 191 (272)
+-|+|+.
T Consensus 88 -~~G~i~~ 94 (155)
T 3ll8_B 88 -KDGYISN 94 (155)
T ss_dssp -CSSCBCH
T ss_pred -CCCcCcH
Confidence 4566654
No 149
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=50.85 E-value=14 Score=28.52 Aligned_cols=67 Identities=10% Similarity=0.041 Sum_probs=56.0
Q ss_pred cCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-ccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 130 KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 130 ~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-P~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
.++.+.++..++-|-.-...|+...+.|+-....++..+ +.+++.|.-.+-+|..||--|-.-+.++
T Consensus 2 ~~~~~~~~~v~~~LN~~La~e~~~~~~y~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~iaErI~~l 69 (158)
T 2c41_A 2 SATTTLKEQVLTTLKREQANAVVMYLNYKKYHWLTYGPLFRDLHLLFEEQGSEVFAMIDELAERSLML 69 (158)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheECcChHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 367778899999999999999999999999999996654 5689999999999999997666544444
No 150
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=50.62 E-value=24 Score=26.50 Aligned_cols=77 Identities=14% Similarity=0.232 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCCh----HHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc---CccHH
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQG----PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVA 172 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~----~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~---NP~la 172 (272)
++++.+++.+ |.|..-.+-=+||...+..+.. ++++.|-. +-..=+|+|-..|+.+-++.. ...+.
T Consensus 73 ~~~~~~~~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~~-----~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 145 (180)
T 3mse_B 73 WDINRILQAL--DINDRGNITYTEFMAGCYRWKNIESTFLKAAFNK-----IDKDEDGYISKSDIVSLVHDKVLDNNDID 145 (180)
T ss_dssp HHHHHHHHHH--CTTCCSEECHHHHHHHHSCCTTC--CHHHHHHHH-----HCTTCSSCBCHHHHHHHTTTSSCCHHHHH
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHHH-----HCCCCCCCCCHHHHHHHHcCCCCCHHHHH
Confidence 4555565555 4455555666677666554422 34455433 345567888888888777532 33566
Q ss_pred HHHhhhccchh
Q 024138 173 EIFSLMSRDEA 183 (272)
Q Consensus 173 e~F~lMsRDEA 183 (272)
++|..+-.|.-
T Consensus 146 ~~~~~~d~~~d 156 (180)
T 3mse_B 146 NFFLSVHSIKK 156 (180)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHhhhccC
Confidence 77777666543
No 151
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=50.59 E-value=72 Score=24.68 Aligned_cols=91 Identities=15% Similarity=0.208 Sum_probs=62.6
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhc--------CChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK--------MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~--------l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
....+++..+...+ |.|..-++--+||...+.. ++++.-+.+++-+.+.+-..=+|.|-|.|...-+...
T Consensus 100 ~~~~~~l~~~F~~~--D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 177 (272)
T 2be4_A 100 LDNSVEFMKIWRKY--DADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQ 177 (272)
T ss_dssp CCCHHHHHHHHHHH--CTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCS
T ss_pred cccHHHHHHHHHHh--CCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhh
Confidence 34455666666655 7777888888999876653 4444444455666677777778999999998876431
Q ss_pred -----------------CccHHHHHhhhccchhhhhcchhh
Q 024138 168 -----------------NPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 168 -----------------NP~lae~F~lMsRDEARHAGFlNk 191 (272)
...+.++|..+-+| +-|+|+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d---~~G~Is~ 215 (272)
T 2be4_A 178 ENFLLQFKMDASSQVERKRDFEKIFAHYDVS---RTGALEG 215 (272)
T ss_dssp SCSSTTSCCCHHHHHHHHHHHHHHHHHHCTT---CCSEEET
T ss_pred HHHHhhhhhhhccccccHHHHHHHHHHhCCC---CCCeecH
Confidence 13578888888766 6687765
No 152
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=50.10 E-value=12 Score=26.89 Aligned_cols=75 Identities=9% Similarity=-0.017 Sum_probs=39.5
Q ss_pred cCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh------c--cCccHHHHHhhhccchhh
Q 024138 113 YNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK------K--TNPVVAEIFSLMSRDEAR 184 (272)
Q Consensus 113 yNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk------~--~NP~lae~F~lMsRDEAR 184 (272)
.|+.-.+--.||...+..+....-..-++-|.+.+... .|.|-|.|...-+. . ....+.++|..+-+|
T Consensus 22 ~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~d~~-~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d--- 97 (159)
T 2ovk_C 22 DGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMG-EKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDRE--- 97 (159)
T ss_dssp TTSSSEEEGGGHHHHHHHTTCCCCHHHHHHTTCCSSTT-SCEEEHHHHHHHHHHHTTCSTTCCHHHHHHHHHHTCTT---
T ss_pred CCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-CCeEcHHHHHHHHHHHhhccCCCcHHHHHHHHHHHCCC---
Confidence 66666777777776665542222222233333333332 46666666543331 0 112467778777655
Q ss_pred hhcchhh
Q 024138 185 HAGYECA 191 (272)
Q Consensus 185 HAGFlNk 191 (272)
+-|+|+.
T Consensus 98 ~~G~I~~ 104 (159)
T 2ovk_C 98 GQGLISS 104 (159)
T ss_dssp SSSEECH
T ss_pred CCCcCcH
Confidence 5577664
No 153
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=49.88 E-value=7.3 Score=30.15 Aligned_cols=64 Identities=23% Similarity=0.326 Sum_probs=32.8
Q ss_pred cHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCC-h-----HHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC
Q 024138 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-G-----PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN 168 (272)
Q Consensus 98 ~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~-----~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N 168 (272)
.+++++.++.++ |.|....+--.||...+.... . ++++.|--| -..=+|+|-..||.+=|+.-.
T Consensus 45 ~~~~~~~~~~~~--d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~f-----D~d~~G~I~~~el~~~l~~~g 114 (176)
T 2lhi_A 45 SEAEVNDLMNEI--DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVF-----DKNGDGLISAAELKHVLTSIG 114 (176)
T ss_dssp CHHHHHHHHTTT--CSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHHHHH-----CSSCSSSBCHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHh--CcCCCccchHHHHHHHHHHhcccCCcHHHHHHHHHHh-----CCCCCCcCcHHHHHHHHHHcC
Confidence 333444444433 444555566666765544321 1 234444333 455677777777776665443
No 154
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=49.48 E-value=18 Score=30.21 Aligned_cols=48 Identities=17% Similarity=0.230 Sum_probs=30.3
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhh
Q 024138 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERS 146 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerS 146 (272)
..+++++++.+.++.-|.+ -...+..++..++++.+.-+.|++||+.|
T Consensus 206 ~~~~~~~~l~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 253 (266)
T 3r0s_A 206 FDKDEVDRLSRAFKTLFRQ--GDLKENAKNLLENQESENVKKMCHFILET 253 (266)
T ss_dssp SCHHHHHHHHHHHHHHHSS--SCHHHHHHHHHTTCCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHcc--CcHHHHHHHHHhhcCCHHHHHHHHHHHhc
Confidence 3457888888888877655 22223333333444446678899999866
No 155
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=49.09 E-value=14 Score=29.43 Aligned_cols=61 Identities=18% Similarity=0.020 Sum_probs=53.8
Q ss_pred HHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 136 R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
.+..++.|-+-...|+.....|.-....+++. .+.+++.|.-.+-+|..||--|-+-+.+.
T Consensus 25 ~~~~~~~LN~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Had~laeri~~l 86 (182)
T 3fvb_A 25 EPKVIERLNEALFLELGAVNQYWLHYRLLNDWGYTRLAKKEREESIEEMHHADKLIDRIIFL 86 (182)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 45688999999999999999999999999765 58899999999999999998777766665
No 156
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=49.03 E-value=17 Score=27.43 Aligned_cols=58 Identities=17% Similarity=0.155 Sum_probs=45.9
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-.+-|+.....|-...-.|+++..-..+ ..|.++.+|.-+.+||-.|+-++.+-|..+
T Consensus 85 ~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i 143 (161)
T 3uoi_A 85 LREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELM 143 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666777777778888655443 589999999999999999999999988765
No 157
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=48.94 E-value=8.2 Score=27.12 Aligned_cols=39 Identities=13% Similarity=0.194 Sum_probs=22.5
Q ss_pred cchhhHHHHHHhhhhhccC--------ccHHHHHhhhccchhhhhcchhh
Q 024138 150 EFSGFLLYKELGRRLKKTN--------PVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 150 EFSGfLLYKEl~rrlk~~N--------P~lae~F~lMsRDEARHAGFlNk 191 (272)
.=+|.|-|.|...-+.... ..+.++|..+-+| +-|+|+.
T Consensus 49 ~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d---~~G~i~~ 95 (140)
T 1ggw_A 49 TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKD---ATGMIGV 95 (140)
T ss_dssp TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHTTCSS---CSSCCCH
T ss_pred CCCCcCcHHHHHHHHHHHhcccCcccHHHHHHHHHHhCCC---CCCcEeH
Confidence 3356666666554443221 4677788877665 5676654
No 158
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=48.82 E-value=13 Score=27.47 Aligned_cols=25 Identities=8% Similarity=0.349 Sum_probs=21.6
Q ss_pred hhhHHhhccCCCCccccChHHHhhh
Q 024138 64 NKTAIKETLLTPRFYTTDFDEMETL 88 (272)
Q Consensus 64 ~k~a~~etLLTPRFYTTDFd~m~~l 88 (272)
....+++.|-.|-||.+|++.+..+
T Consensus 37 ~i~~le~~ladp~~y~~d~~~~~~l 61 (89)
T 2lw1_A 37 KLEALQTQVADASFFSQPHEQTQKV 61 (89)
T ss_dssp HHHHHHHHHHSTTGGGSCHHHHHHH
T ss_pred HHHHHHHHHhCcccccCCHHHHHHH
Confidence 3566888899999999999998886
No 159
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=48.74 E-value=21 Score=26.69 Aligned_cols=46 Identities=9% Similarity=0.177 Sum_probs=26.9
Q ss_pred ccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHH
Q 024138 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEF 142 (272)
Q Consensus 95 ~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveF 142 (272)
.....+|+++|++++ |.|..-.+-=+||...+.....+.++.|--|
T Consensus 81 ~~~~~~e~~~l~~~~--D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~~ 126 (150)
T 2jjz_A 81 VPKTHLEMKKMISEV--TGGVSDTISYRDFVNMMLGKRSAVLKLVMMF 126 (150)
T ss_dssp CCCCHHHHHHHHHHH--HTTSCSSBCHHHHHHHHHSSSCCHHHHHHC-
T ss_pred CCCCHHHHHHHHHHH--CCCCCCcEeHHHHHHHHHHhHHHHHHHHHHH
Confidence 345566677777765 3444445666677666666566666666543
No 160
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=47.59 E-value=22 Score=25.20 Aligned_cols=92 Identities=16% Similarity=0.206 Sum_probs=54.1
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCC-hHH---HHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPL---RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN- 168 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~---R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N- 168 (272)
...+..++++.++..+ |.|....+--+||...+.... ... ...-+.-+-+.+-..=+|.|-..|+.+-++..+
T Consensus 50 ~~~~~~~~~~~~~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~ 127 (162)
T 1top_A 50 GQNPTKEELDAIIEEV--DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE 127 (162)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHHHH--cCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC
Confidence 4456667777777777 455556677777765544321 111 122222233344556688888888887775433
Q ss_pred ----ccHHHHHhhhccchhhhhcchh
Q 024138 169 ----PVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 169 ----P~lae~F~lMsRDEARHAGFlN 190 (272)
..+.++|..+-.| +-|.|+
T Consensus 128 ~~~~~~~~~~~~~~d~~---~dg~i~ 150 (162)
T 1top_A 128 HVTEEDIEDLMKDSDKN---NDGRID 150 (162)
T ss_dssp CCCHHHHHHHHHHHCTT---CSSSBC
T ss_pred CCCHHHHHHHHHHhCCC---CCCcCc
Confidence 3567777777554 456655
No 161
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=47.59 E-value=36 Score=32.65 Aligned_cols=82 Identities=18% Similarity=0.297 Sum_probs=51.0
Q ss_pred ccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC------ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc
Q 024138 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (272)
Q Consensus 93 id~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~ 166 (272)
+.+++..+|++.|++++ |-|..-.+-=+||...+... ..++++.|--| -..=+|+|-..||.+=|++
T Consensus 331 LG~~~TeeEI~~Lf~~~--D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~f-----DkDgdG~IS~eELr~vL~~ 403 (440)
T 3u0k_A 331 LGQNPTEAELQDMINEV--DADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVF-----DKDGNGYISAAELRHVMTN 403 (440)
T ss_dssp TTCCCCHHHHHHHHHHH--CSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHH-----CTTCSSEECHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHH-----CCCCcCcCCHHHHHHHHHH
Confidence 35566777888888877 45555556666776554322 34566776544 4556889888888776653
Q ss_pred c-----CccHHHHHhhhccc
Q 024138 167 T-----NPVVAEIFSLMSRD 181 (272)
Q Consensus 167 ~-----NP~lae~F~lMsRD 181 (272)
- ..++.++|..+-.|
T Consensus 404 lGe~LSdeEIdeLfke~D~D 423 (440)
T 3u0k_A 404 LGEKLTDEEVDEMIREADID 423 (440)
T ss_dssp HTCCCCHHHHHHHHHHHCTT
T ss_pred hCCCCCHHHHHHHHHHhCCC
Confidence 2 23456666665444
No 162
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=47.46 E-value=62 Score=24.50 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=47.2
Q ss_pred cccHHHHHHHH-------HHHhhccCCCCcccChhHHHHHh---------cC--ChHHHHHHHHHHHhhhhccchhhHHH
Q 024138 96 KLNQAEFEALL-------QEFKTDYNQTHFVRNKEFKEAAD---------KM--QGPLRQIFVEFLERSCTAEFSGFLLY 157 (272)
Q Consensus 96 ~~~~~E~~Aml-------~Efr~DyNr~HFvR~~eF~~~~d---------~l--~~~~R~~FveFLerScTAEFSGfLLY 157 (272)
.+..++++.++ +.+ |.|..-.+--+||...+. .+ +++..+..+.-+-+.+-..=+|+|-.
T Consensus 70 ~~~~~~~~~l~~~~~~lf~~~--D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~ 147 (208)
T 2hpk_A 70 NATDEQVEKMRDAVRVFFLHK--GVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDV 147 (208)
T ss_dssp CCCHHHHHHHHHHHHHHHHHT--TCBTTTBEEGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCH
T ss_pred CCCHHHHHHHHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCH
Confidence 34455666666 433 555566677778876654 22 33333333333444556667888888
Q ss_pred HHHhhhhhc---cCccHHHHHhhhccc
Q 024138 158 KELGRRLKK---TNPVVAEIFSLMSRD 181 (272)
Q Consensus 158 KEl~rrlk~---~NP~lae~F~lMsRD 181 (272)
.|+.+=++. ....+.++|..+-.|
T Consensus 148 ~El~~~l~~~g~~~~~~~~~~~~~D~d 174 (208)
T 2hpk_A 148 DELKTMMKAFDVPQEAAYTFFEKADTD 174 (208)
T ss_dssp HHHHHHHHHTTSCTTHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHhCCC
Confidence 888776643 234455556555433
No 163
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=47.20 E-value=20 Score=25.35 Aligned_cols=74 Identities=8% Similarity=0.169 Sum_probs=41.2
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhc-CC-----hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQ-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~-----~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
...+..++++.++..+-.| +-=+||...+.. +. ..+++.| +.+-..=+|+|-..|+.+=++.-
T Consensus 45 g~~~~~~~~~~l~~~~d~~------i~~~eF~~~~~~~~~~~~~~~~l~~~F-----~~~D~d~~G~I~~~el~~~l~~~ 113 (146)
T 2qac_A 45 GLAPSSIDEKKIKELYGDN------LTYEQYLEYLSICVHDKDNVEELIKMF-----AHFDNNCTGYLTKSQMKNILTTW 113 (146)
T ss_dssp TCCCCHHHHHHHHHHHCSE------ECHHHHHHHHHHTCCTTCCHHHHHHHH-----HTTCTTCSSEEEHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHhCCC------CCHHHHHHHHHHHhcCcchHHHHHHHH-----HHhCCCCCCCCCHHHHHHHHHHh
Confidence 3455566677777666444 555566555542 21 2233443 33445567888888887766543
Q ss_pred C-----ccHHHHHhhh
Q 024138 168 N-----PVVAEIFSLM 178 (272)
Q Consensus 168 N-----P~lae~F~lM 178 (272)
. ..+.++|..+
T Consensus 114 g~~~~~~~~~~~~~~~ 129 (146)
T 2qac_A 114 GDALTDQEAIDALNAF 129 (146)
T ss_dssp SSCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHc
Confidence 2 3455666554
No 164
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=47.11 E-value=18 Score=27.24 Aligned_cols=60 Identities=15% Similarity=0.094 Sum_probs=51.6
Q ss_pred HHHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 137 ~~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
+..++.|-+-...|+.-...|.-.+..+++. -+.+++.|.-.+.+|..||--+=+-+.+.
T Consensus 5 ~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~had~l~eri~~l 65 (154)
T 3r2k_A 5 PEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLL 65 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3478889999999999999999999999765 58899999999999999998776655555
No 165
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=46.53 E-value=26 Score=26.58 Aligned_cols=74 Identities=23% Similarity=0.245 Sum_probs=45.4
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-----ccH
Q 024138 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-----PVV 171 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-----P~l 171 (272)
+..++++.+++++ |.|..-.+--+||...+..+ .+.++.|- .+-..=+|.|-..|+.+-++..+ ..+
T Consensus 70 ~~~~~~~~l~~~~--D~d~~g~i~~~eF~~~~~~~-~~~~~~F~-----~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~ 141 (198)
T 1juo_A 70 FNLETCRLMVSML--DRDMSGTMGFNEFKELWAVL-NGWRQHFI-----SFDTDRSGTVDPQELQKALTTMGFRLSPQAV 141 (198)
T ss_dssp CCHHHHHHHHHHH--CTTCSSCEEHHHHHHHHHHH-HHHHHHHH-----TTCTTCCSEECHHHHHHHHHHTTCCCCHHHH
T ss_pred CCHHHHHHHHHHh--CCCCCCeECHHHHHHHHHHH-HHHHHHHH-----HhCCCCCCcCCHHHHHHHHHHhCCCCCHHHH
Confidence 4566777777766 44555556667777666543 34555553 33456688888888887765432 345
Q ss_pred HHHHhhh
Q 024138 172 AEIFSLM 178 (272)
Q Consensus 172 ae~F~lM 178 (272)
.++|..+
T Consensus 142 ~~l~~~~ 148 (198)
T 1juo_A 142 NSIAKRY 148 (198)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 5666555
No 166
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=46.06 E-value=19 Score=23.37 Aligned_cols=68 Identities=22% Similarity=0.251 Sum_probs=39.6
Q ss_pred cHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCC-hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC
Q 024138 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN 168 (272)
Q Consensus 98 ~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N 168 (272)
.++++. +...| |.|..-++--+||...+..+. ...-..-++-+.+-+-..=+|.|-|.|...-++..+
T Consensus 7 ~~~~l~-~F~~~--D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 75 (81)
T 1c7v_A 7 EEEILR-AFKVF--DANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSK 75 (81)
T ss_dssp CHHHHH-HHHHH--SCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC-
T ss_pred HHHHHH-HHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhh
Confidence 345566 55555 566666677777777666553 222223344444555555678888888777665443
No 167
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=45.78 E-value=39 Score=22.98 Aligned_cols=82 Identities=20% Similarity=0.224 Sum_probs=44.1
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccChhHHHHHhc---CChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc------
Q 024138 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------ 167 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~---l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~------ 167 (272)
+.++|++.|++++- ....+-=+||...+.. -..++++.|-.| -..=+|+|-..|+.+-++.-
T Consensus 6 ~~~~e~~~l~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 2pvb_A 6 LKDADVAAALAACS----AADSFKHKEFFAKVGLASKSLDDVKKAFYVI-----DQDKSGFIEEDELKLFLQNFSPSARA 76 (108)
T ss_dssp SCHHHHHHHHHHTC----STTCCCHHHHHHHHTGGGSCHHHHHHHHHHH-----CTTCSSSBCHHHHHTGGGGTCTTSCC
T ss_pred CCHHHHHHHHHHhC----CCCcCcHHHHHHHHhCChhHHHHHHHHHHHH-----CCCCCCcCCHHHHHHHHHHHhccCCC
Confidence 45567777777653 2223444566555432 122345555443 44557888888887776643
Q ss_pred --CccHHHHHhhhccchhhhhcchh
Q 024138 168 --NPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 168 --NP~lae~F~lMsRDEARHAGFlN 190 (272)
...+.++|..+-.| +-|.|+
T Consensus 77 ~~~~~~~~~~~~~D~~---~dg~i~ 98 (108)
T 2pvb_A 77 LTDAETKAFLADGDKD---GDGMIG 98 (108)
T ss_dssp CCHHHHHHHHHHHCTT---CSSSBC
T ss_pred CCHHHHHHHHHHhCCC---CCCcEe
Confidence 12345555555433 445554
No 168
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=45.57 E-value=21 Score=26.81 Aligned_cols=67 Identities=18% Similarity=0.130 Sum_probs=52.4
Q ss_pred HHHHHhhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccc-hhhhhcchhhhhhhhhhcccccCceeeeeehhcccc
Q 024138 140 VEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRD-EARHAGYECASKSVMYVKYTFFKPKFIFYATYLSEK 217 (272)
Q Consensus 140 veFLerScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRD-EARHAGFlNkal~Df~rkYTfF~PKfIfYATYLSEK 217 (272)
.+-|+.....|-...=.|+++.+-..+ ..|..+.++.-..+| |-.|+-++.+-+..+ +|
T Consensus 83 ~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~e~ee~h~~~l~~~l~~i-------------------~~ 143 (154)
T 3r2k_A 83 PEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGLI-------------------AR 143 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHH-------------------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HH
Confidence 455556666677777778888776644 589999999999999 999999999977654 47
Q ss_pred cchhHHHH
Q 024138 218 IGYWRYIT 225 (272)
Q Consensus 218 IGYwRYIt 225 (272)
+|.-+|+.
T Consensus 144 ~g~~~y~~ 151 (154)
T 3r2k_A 144 MGLENYLQ 151 (154)
T ss_dssp HCHHHHHH
T ss_pred HCHHHHHH
Confidence 88887764
No 169
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=44.91 E-value=25 Score=25.25 Aligned_cols=19 Identities=11% Similarity=0.230 Sum_probs=8.7
Q ss_pred ccCCCCcccChhHHHHHhc
Q 024138 112 DYNQTHFVRNKEFKEAADK 130 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~ 130 (272)
|.|..-++--+||...+..
T Consensus 95 D~d~~G~I~~~El~~~l~~ 113 (159)
T 2ovk_C 95 DREGQGLISSAEIRNVLKM 113 (159)
T ss_dssp CTTSSSEECHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHH
Confidence 4444444444455444443
No 170
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=44.78 E-value=36 Score=23.24 Aligned_cols=85 Identities=18% Similarity=0.205 Sum_probs=52.2
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC---ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc---
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT--- 167 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~--- 167 (272)
...+..+|++.|++++- ..-.+-=+||...+... ..++++.|--| -..=+|+|-..|+.+=++.-
T Consensus 4 ~~~~~~~ei~~~~~~~D----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~i~~~el~~~l~~~~~~ 74 (109)
T 3fs7_A 4 TDILSAKDIESALSSCQ----AADSFNYKSFFSTVGLSSKTPDQIKKVFGIL-----DQDKSGFIEEEELQLFLKNFSSS 74 (109)
T ss_dssp GGTSCHHHHHHHHHHTC----STTCCCHHHHHHHHTCTTCCHHHHHHHHHHH-----STTCSSSBCHHHHHTTGGGTCTT
T ss_pred cCcCCHHHHHHHHHhcC----CCCcCcHHHHHHHHhcCCCcHHHHHHHHHHH-----CCCCCCeEeHHHHHHHHHHHhcc
Confidence 34566788888888873 23344446776665432 23455555544 45667999999988776543
Q ss_pred -----CccHHHHHhhhccchhhhhcchh
Q 024138 168 -----NPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 168 -----NP~lae~F~lMsRDEARHAGFlN 190 (272)
...+.++|..+-.| +-|.|+
T Consensus 75 ~~~~~~~~~~~~~~~~D~~---~dg~i~ 99 (109)
T 3fs7_A 75 ARVLTSAETKAFLAAGDTD---GDGKIG 99 (109)
T ss_dssp SCCCCHHHHHHHHHHHCTT---CSSSBC
T ss_pred cccCCHHHHHHHHHHhCCC---CCCcCc
Confidence 23566777766554 455554
No 171
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=44.77 E-value=16 Score=25.70 Aligned_cols=81 Identities=10% Similarity=0.065 Sum_probs=39.6
Q ss_pred ccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC-----------ChHHHHHHHHHHHhhhhccchhhHHHHHHhhh
Q 024138 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRR 163 (272)
Q Consensus 95 ~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-----------~~~~R~~FveFLerScTAEFSGfLLYKEl~rr 163 (272)
..+..++++.+++++. |.|..-.+--+||...+... ....++.|- ..-..=+|.|-..|+.+=
T Consensus 35 ~~~~~~~~~~l~~~~~-D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~-----~~D~d~~G~I~~~el~~~ 108 (148)
T 1m45_A 35 YNPTNQLVQDIINADS-SLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQ-----VFDKESTGKVSVGDLRYM 108 (148)
T ss_dssp CCCCHHHHHHHHHC---CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHH-----TTCSSSSSEEEHHHHHHH
T ss_pred CCCCHHHHHHHHHHhh-CCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHH-----HhCCCCCCcCCHHHHHHH
Confidence 3444556666655542 44444445555555444333 133444443 234455788888887776
Q ss_pred hhccC-----ccHHHHHhhhccc
Q 024138 164 LKKTN-----PVVAEIFSLMSRD 181 (272)
Q Consensus 164 lk~~N-----P~lae~F~lMsRD 181 (272)
++.-+ ..+.++|..+-.|
T Consensus 109 l~~~g~~~~~~~~~~~~~~~d~d 131 (148)
T 1m45_A 109 LTGLGEKLTDAEVDELLKGVEVD 131 (148)
T ss_dssp HHHSTTCCCHHHHHHHHTTCCCC
T ss_pred HHHcCCCCCHHHHHHHHHHhCCC
Confidence 65432 2355555555443
No 172
>2yuk_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=44.46 E-value=8.5 Score=29.26 Aligned_cols=32 Identities=22% Similarity=0.155 Sum_probs=24.0
Q ss_pred chhhHHHH-HHhhhhhccCccHH-------HHHhhhccch
Q 024138 151 FSGFLLYK-ELGRRLKKTNPVVA-------EIFSLMSRDE 182 (272)
Q Consensus 151 FSGfLLYK-El~rrlk~~NP~la-------e~F~lMsRDE 182 (272)
-|+|+||- |-..+||..||.+. +.+..|+-+|
T Consensus 27 ~sAf~lf~~e~R~kik~enP~~s~~~~eIse~Wk~ls~ee 66 (90)
T 2yuk_A 27 TVAPVLYTNINFPNLKEEFPDWTTRVKQIAKLWRKASSQE 66 (90)
T ss_dssp SSSHHHHHHHHCTTHHHHCCSHHHHHHHHHHHHHHSCHHH
T ss_pred ccHHHHHHHHhHHHHHHHCcCccchHHHHHHHHHcCCHHH
Confidence 47888886 66678899999977 6666666555
No 173
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=43.96 E-value=86 Score=22.43 Aligned_cols=30 Identities=13% Similarity=0.119 Sum_probs=22.4
Q ss_pred ccchhHHHHHHhHHhhCCCCCCCCCcccccc
Q 024138 217 KIGYWRYITIYRHLKANPDSSMTGRQSCGPD 247 (272)
Q Consensus 217 KIGYwRYItIyRHLe~nPe~r~~~~~~~~PI 247 (272)
+|.|--|+.+++++- .++-...|...+.||
T Consensus 144 ~i~~~ef~~~~~~~~-~~~~~~~g~~~~g~~ 173 (174)
T 1q80_A 144 LLSLEEFVIAGSDFF-MNDGDSTNKVFWGPL 173 (174)
T ss_dssp SBCHHHHHHHHHHHH-HCCCCSSTTCSSSSC
T ss_pred eEeHHHHHHHHHHHh-ccCcccCCCccccCC
Confidence 688888898888776 555566677777775
No 174
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=43.95 E-value=16 Score=30.03 Aligned_cols=57 Identities=19% Similarity=0.292 Sum_probs=41.7
Q ss_pred HHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 140 VEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 140 veFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
++.|...-..|...---|-=.++.-++. .|.|+++|.-.|.+|..||.-+=+.|.++
T Consensus 8 ~~nL~~afagEs~A~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~i 65 (170)
T 3pwf_A 8 KKFLEEAFAGESMAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGKL 65 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5667777777777766665555555444 89999999999999999997544446544
No 175
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=43.73 E-value=12 Score=28.78 Aligned_cols=76 Identities=16% Similarity=0.197 Sum_probs=44.1
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc----cCccHHHHHhhhccchhhhhc
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK----TNPVVAEIFSLMSRDEARHAG 187 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~----~NP~lae~F~lMsRDEARHAG 187 (272)
|.|+.-.+--+||......+....- ..++-+.+.+-..=+|.|-|.|...-+.. ....+.++|..+-+| +-|
T Consensus 62 D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~F~~~D~d---~~G 137 (191)
T 3k21_A 62 DEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFRVFDVD---NDG 137 (191)
T ss_dssp CTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHHHHHHSTT---CSS
T ss_pred CCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHHHHHhCCC---CCC
Confidence 6666666666777666544321111 23344444555556777777776554422 224677888888666 567
Q ss_pred chhh
Q 024138 188 YECA 191 (272)
Q Consensus 188 FlNk 191 (272)
+|+.
T Consensus 138 ~Is~ 141 (191)
T 3k21_A 138 EITT 141 (191)
T ss_dssp CBCH
T ss_pred cCCH
Confidence 7765
No 176
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=43.54 E-value=26 Score=26.99 Aligned_cols=85 Identities=19% Similarity=0.277 Sum_probs=52.8
Q ss_pred ChHHHhhhhcccccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHH
Q 024138 81 DFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKEL 160 (272)
Q Consensus 81 DFd~m~~lf~~eid~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl 160 (272)
+|++.-.++.........++++....+-| |.|..-++--+||...+..+...+-..=++-|.+-+. -=+|.|-|.|-
T Consensus 65 ~~~ef~~~~~~~~~~~~~~~~l~~aF~~f--D~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF 141 (176)
T 2lhi_A 65 EFSEFLALMSRQLKSNDSEQELLEAFKVF--DKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQF 141 (176)
T ss_dssp CTTHHHHHHTSSCCSSHHHHHHHHHHHHH--CSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHH
T ss_pred hHHHHHHHHHHhcccCCcHHHHHHHHHHh--CCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHH
Confidence 44444443322222233445666666655 8888889999999988876644333333444445555 56899999998
Q ss_pred hhhhhccC
Q 024138 161 GRRLKKTN 168 (272)
Q Consensus 161 ~rrlk~~N 168 (272)
.+=+++.+
T Consensus 142 ~~~m~k~~ 149 (176)
T 2lhi_A 142 AALLSKGS 149 (176)
T ss_dssp HHHHTCCS
T ss_pred HHHHHhcC
Confidence 87776543
No 177
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=43.18 E-value=62 Score=24.16 Aligned_cols=88 Identities=13% Similarity=0.154 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHh-hccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc----CccHHH
Q 024138 99 QAEFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----NPVVAE 173 (272)
Q Consensus 99 ~~E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~----NP~lae 173 (272)
+++.+.+.+-|+ -|-|+.-.+--+||...+..+... ..-++-|.+.+-..=+|.|-|.|...-+... ...+.+
T Consensus 35 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~ 112 (180)
T 3mse_B 35 NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKA 112 (180)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHHHH
Confidence 334444444443 277777788888888776655321 1335555666666678889888887655322 246889
Q ss_pred HHhhhccchhhhhcchhh
Q 024138 174 IFSLMSRDEARHAGYECA 191 (272)
Q Consensus 174 ~F~lMsRDEARHAGFlNk 191 (272)
+|..+-+| +-|+|+.
T Consensus 113 ~F~~~D~d---~~G~I~~ 127 (180)
T 3mse_B 113 AFNKIDKD---EDGYISK 127 (180)
T ss_dssp HHHHHCTT---CSSCBCH
T ss_pred HHHHHCCC---CCCCCCH
Confidence 99998776 5688875
No 178
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=43.05 E-value=39 Score=23.88 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=27.7
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHh
Q 024138 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLER 145 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLer 145 (272)
..+++|+++++.|..-+. ..|+++.++..++||..
T Consensus 45 ~~~~~W~~~v~~M~~~~g--------------~~ls~~e~~~I~~YL~~ 79 (81)
T 2blf_B 45 KGQAFWDAEVQKMIKVYH--------------APVDEADAKAIADYLAK 79 (81)
T ss_dssp CCHHHHHHHHHHHHHTSC--------------CCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcC--------------CCCCHHHHHHHHHHHHH
Confidence 457899999999976443 36889999999999964
No 179
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=42.56 E-value=42 Score=29.50 Aligned_cols=94 Identities=17% Similarity=0.164 Sum_probs=64.2
Q ss_pred cccHHHH---HHHHHHHhhccCCCCcccChhH-HHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccCccH
Q 024138 96 KLNQAEF---EALLQEFKTDYNQTHFVRNKEF-KEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVV 171 (272)
Q Consensus 96 ~~~~~E~---~Aml~Efr~DyNr~HFvR~~eF-~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~l 171 (272)
.+.+||+ +.+++-|++-.-.--=.+.+.+ ++....+....-+.+||=|.=+--=|--+|==|+=|+-.+. .+ |
T Consensus 65 ~LarEEL~HFeqVl~im~~Rgi~l~~~~~~~Ya~~L~k~vr~~ep~~l~D~Llv~AlIEARSCERF~lLa~~l~--d~-L 141 (206)
T 2itb_A 65 RLAREELVHHEQVLRLMKRRGVPLRPVSAGRYASGLRRLVRAHEPVKLVDTLVVGAFIEARSCERFAALVPHLD--EE-L 141 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSHHHHHHTTSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHGGGSC--HH-H
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhHHHHHHHHhcCc--HH-H
Confidence 3456664 5667777654433333455555 44555665555577888887666667777777888898884 34 9
Q ss_pred HHHHhhhccchhhhhc-chhhh
Q 024138 172 AEIFSLMSRDEARHAG-YECAS 192 (272)
Q Consensus 172 ae~F~lMsRDEARHAG-FlNka 192 (272)
++.|.-+-+.||||-| ||.-|
T Consensus 142 ~~FY~~Ll~SEArHy~~yl~LA 163 (206)
T 2itb_A 142 GRFYHGLLKSEARHYQGYLKLA 163 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHH
Confidence 9999999999999975 45443
No 180
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=42.33 E-value=35 Score=25.89 Aligned_cols=18 Identities=11% Similarity=0.211 Sum_probs=13.2
Q ss_pred HHHHHhhhccchhhhhcchhh
Q 024138 171 VAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 171 lae~F~lMsRDEARHAGFlNk 191 (272)
+.++|..+-+| +-|+|+.
T Consensus 130 ~~~~F~~~D~d---~~G~Is~ 147 (208)
T 2hpk_A 130 SNSYYDVLDDD---GDGTVDV 147 (208)
T ss_dssp HHHHHHHHCTT---CSSSBCH
T ss_pred HHHHHHHhCCC---CCCcCCH
Confidence 77789888776 5677765
No 181
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=41.25 E-value=26 Score=25.02 Aligned_cols=87 Identities=16% Similarity=0.201 Sum_probs=52.0
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC------ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
...+..++++.|++++-. |..-.+-=+||...+... ..++++.|- ..-..=+|+|-..|+.+=++..
T Consensus 40 g~~~~~~~~~~l~~~~d~--~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~-----~~D~d~~G~I~~~el~~~l~~~ 112 (148)
T 1exr_A 40 GQNPTEAELQDMINEVDA--DGNGTIDFPEFLSLMARKMKEQDSEEELIEAFK-----VFDRDGNGLISAAELRHVMTNL 112 (148)
T ss_dssp TCCCCHHHHHHHHHHHCT--TCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHSTTCSSCBCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHCC--CCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHH-----HhCCCCCCcCCHHHHHHHHHHh
Confidence 445666788888887644 444456666775544322 134455553 3345568999888888766543
Q ss_pred C-----ccHHHHHhhhccchhhhhcchh
Q 024138 168 N-----PVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 168 N-----P~lae~F~lMsRDEARHAGFlN 190 (272)
. ..+.++|..+-.| +-|.|+
T Consensus 113 g~~~~~~~~~~~~~~~d~d---~dg~i~ 137 (148)
T 1exr_A 113 GEKLTDDEVDEMIREADID---GDGHIN 137 (148)
T ss_dssp TCCCCHHHHHHHHHHHCSS---SSSSBC
T ss_pred CCCCCHHHHHHHHHHhCCC---CCCcEe
Confidence 2 3567777766554 345554
No 182
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=40.77 E-value=8.4 Score=29.86 Aligned_cols=80 Identities=14% Similarity=0.187 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc--C-----ccHH
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT--N-----PVVA 172 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~--N-----P~la 172 (272)
++++.+++.+ |.|..-.+-=+||...+..+.......-+..+-+.+-..=+|+|-..|+.+=++.. + ..+.
T Consensus 93 ~~~~~l~~~~--D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~ 170 (197)
T 3pm8_A 93 PDIHQVLRDI--DSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAID 170 (197)
T ss_dssp HHHHHHHHC---------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHH
Confidence 3344444333 33333344445565444332211112222233344456778999999998888654 1 2456
Q ss_pred HHHhhhccc
Q 024138 173 EIFSLMSRD 181 (272)
Q Consensus 173 e~F~lMsRD 181 (272)
++|..+-.|
T Consensus 171 ~l~~~~D~d 179 (197)
T 3pm8_A 171 SLLQEVDLN 179 (197)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHHcCC
Confidence 666666544
No 183
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=40.43 E-value=55 Score=22.23 Aligned_cols=83 Identities=20% Similarity=0.239 Sum_probs=44.9
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhc---CChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-----
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----- 167 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~---l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~----- 167 (272)
.+.++|++.|++++- ..-.+--+||...+.. -..++++.|-.| -..=+|+|-..|+.+-++.-
T Consensus 5 ~~t~~e~~~~~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~~~~~~g~ 75 (108)
T 1rro_A 5 ILSAEDIAAALQECQ----DPDTFEPQKFFQTSGLSKMSASQVKDIFRFI-----DNDQSGYLDGDELKYFLQKFQSDAR 75 (108)
T ss_dssp TSCHHHHHHHHHHTC----STTCCCHHHHHHHHSGGGSCHHHHHHHHHHH-----CTTCSSEECTHHHHTGGGGTCTTSC
T ss_pred cCCHHHHHHHHHHcc----CCCCcCHHHHHHHHhcCcccHHHHHHHHHHh-----CCCCCCcCCHHHHHHHHHHHhhccC
Confidence 455677777777763 2223445566555431 122344455433 45567888888887776543
Q ss_pred ---CccHHHHHhhhccchhhhhcchh
Q 024138 168 ---NPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 168 ---NP~lae~F~lMsRDEARHAGFlN 190 (272)
...+.++|..+..| +-|.|+
T Consensus 76 ~~~~~~~~~~~~~~D~~---~dg~i~ 98 (108)
T 1rro_A 76 ELTESETKSLMDAADND---GDGKIG 98 (108)
T ss_dssp CCCHHHHHHHHHHHCCS---SSSSEE
T ss_pred CCCHHHHHHHHHHhCCC---CCCcCc
Confidence 12455566655444 345544
No 184
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=40.38 E-value=22 Score=24.82 Aligned_cols=86 Identities=22% Similarity=0.308 Sum_probs=50.6
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhc-C-----ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-M-----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l-----~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
...+..++++.+++.+ |.|..-.+--+||...+.. + ....++.| +.+-..=+|+|-..|+.+=++..
T Consensus 36 ~~~~~~~~~~~l~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F-----~~~D~d~~G~i~~~el~~~l~~~ 108 (142)
T 2bl0_C 36 GVRVEPAAFNEMFNEA--DATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAF-----RTFDPEGTGYIPKAALQDALLNL 108 (142)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHH-----HHTCCSSCSCEEHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHh--CcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHH-----HHHCCCCCCcCcHHHHHHHHHHc
Confidence 4455566777777765 4444445666666554443 1 22334444 34456668888888888777644
Q ss_pred C-----ccHHHHHhhhccchhhhhcchh
Q 024138 168 N-----PVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 168 N-----P~lae~F~lMsRDEARHAGFlN 190 (272)
+ ..+.++|..+- | +-|.|+
T Consensus 109 g~~~~~~~~~~~~~~~d-~---~dg~i~ 132 (142)
T 2bl0_C 109 GDRLKPHEFAEFLGITE-T---EKGQIR 132 (142)
T ss_dssp SSCCCHHHHHHHHHHHC-C---SSSEEC
T ss_pred CCCCCHHHHHHHHHHhC-C---CCCcEe
Confidence 3 34677777765 3 456554
No 185
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=40.37 E-value=32 Score=26.89 Aligned_cols=13 Identities=31% Similarity=0.043 Sum_probs=8.2
Q ss_pred cccHHHHHHHHHH
Q 024138 96 KLNQAEFEALLQE 108 (272)
Q Consensus 96 ~~~~~E~~Aml~E 108 (272)
....+||..+|..
T Consensus 64 ~I~~~El~~~l~~ 76 (219)
T 3cs1_A 64 KLCYDEVYSGCLE 76 (219)
T ss_dssp CBCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHH
Confidence 3566777766655
No 186
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=40.34 E-value=22 Score=25.41 Aligned_cols=38 Identities=8% Similarity=0.124 Sum_probs=23.0
Q ss_pred chhhHHHHHHhhhhhc------cCccHHHHHhhhccchhhhhcchhh
Q 024138 151 FSGFLLYKELGRRLKK------TNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 151 FSGfLLYKEl~rrlk~------~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
-+|.|-|.|...-+.. ....+.++|..+-+| +-|+|+.
T Consensus 63 ~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d---~~G~I~~ 106 (156)
T 1wdc_B 63 APGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQ---ETKKLNI 106 (156)
T ss_dssp SSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTT---CCSCEEH
T ss_pred CCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCcC---CCCccCH
Confidence 4677766666544432 123577888887665 5677765
No 187
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=40.31 E-value=23 Score=26.34 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=48.4
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-.+-|+.....|-...-.|+++.+...+ ..|.+++++.-+..||-.|+-++...+..+
T Consensus 83 ~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l 141 (158)
T 2y3q_A 83 VEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLI 141 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777888888889998887654 589999999999999999999999987765
No 188
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=40.08 E-value=19 Score=26.39 Aligned_cols=78 Identities=17% Similarity=0.239 Sum_probs=43.4
Q ss_pred ccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-----c
Q 024138 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-----P 169 (272)
Q Consensus 95 ~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-----P 169 (272)
..+..++++.+++.+ |.|..-.+--+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++.-+ .
T Consensus 39 ~~~~~~~~~~l~~~~--D~~~~g~i~~~ef~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~el~~~l~~~g~~~~~~ 110 (172)
T 2znd_A 39 TPFNPVTVRSIISMF--DRENKAGVNFSEFTGVWKYI-TDWQNVFRTY-----DRDNSGMIDKNELKQALSGFGYRLSDQ 110 (172)
T ss_dssp SCCCHHHHHHHHHHH--CSSSSSEECHHHHHHHHHHH-HHHHHHHHHH-----CTTCSSEECHHHHHHHHHHTTCCCCHH
T ss_pred CCCCHHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHH-----CCCCCCccCHHHHHHHHHHcCCCCCHH
Confidence 335566777777665 44555556666776665543 3455555433 344577777777776664332 2
Q ss_pred cHHHHHhhhcc
Q 024138 170 VVAEIFSLMSR 180 (272)
Q Consensus 170 ~lae~F~lMsR 180 (272)
.+.++|..+..
T Consensus 111 ~~~~~~~~~d~ 121 (172)
T 2znd_A 111 FHDILIRKFDR 121 (172)
T ss_dssp HHHHHHHHHCT
T ss_pred HHHHHHHHhCC
Confidence 34555554443
No 189
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=39.96 E-value=19 Score=27.27 Aligned_cols=84 Identities=17% Similarity=0.177 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHhh-ccCCCCcccChhHHHHHhcC--ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-------
Q 024138 99 QAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKM--QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------- 168 (272)
Q Consensus 99 ~~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l--~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N------- 168 (272)
.++++.+.+-|+. |-|..-.+--+||... ..+ ++. ++-|.+.+-..=+|.|-|.|...-+....
T Consensus 25 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~-----~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~ 98 (202)
T 2bec_A 25 QASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL-----GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDT 98 (202)
T ss_dssp HHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT-----HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc-----HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcc
Confidence 3444444444432 6666666766777554 222 222 44444555555677777777766554332
Q ss_pred ---------------ccHHHHHhhhccchhhhhcchhh
Q 024138 169 ---------------PVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 169 ---------------P~lae~F~lMsRDEARHAGFlNk 191 (272)
..+.++|..+-.| +-|+|+.
T Consensus 99 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d---~dG~Is~ 133 (202)
T 2bec_A 99 ETQDPKKPEPLNSRRNKLHYAFQLYDLD---RDGKISR 133 (202)
T ss_dssp C-----CCCCTTSHHHHHHHHHHHHCTT---CSSEECH
T ss_pred cccccccccccccHHHHHHHHHHHhCCC---CCCeEcH
Confidence 2478889888766 6788876
No 190
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=39.86 E-value=20 Score=25.22 Aligned_cols=54 Identities=17% Similarity=0.137 Sum_probs=33.2
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
|.|..-++--+||...+..+...+-..=++-+.+.+-..=+|.|-|.|..+-+.
T Consensus 93 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 93 DKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp CSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 666666777777777766553332233344455555555678888888776653
No 191
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=39.50 E-value=21 Score=21.96 Aligned_cols=20 Identities=15% Similarity=0.084 Sum_probs=10.2
Q ss_pred hhhhccchhhHHHHHHhhhh
Q 024138 145 RSCTAEFSGFLLYKELGRRL 164 (272)
Q Consensus 145 rScTAEFSGfLLYKEl~rrl 164 (272)
+.+-..=+|.|-|.|...-+
T Consensus 44 ~~~D~~~dg~i~~~ef~~~~ 63 (67)
T 1tiz_A 44 EEIDVDGNGELNADEFTSCI 63 (67)
T ss_dssp HHHCCSSSSEECHHHHHHHH
T ss_pred HHHCCCCCCcCcHHHHHHHH
Confidence 33444445666666655444
No 192
>2r80_B Hemoglobin subunit beta; oxygen tranport/storage, heme, iron, metal-binding, oxygen transport, transport, oxygen binding; HET: HEM; 1.44A {Columba livia} PDB: 3dhr_B* 3mju_B* 1faw_B* 3k8b_B* 2qmb_B* 3eok_B* 1a4f_B* 1c40_B* 1hv4_B* 2zfb_B* 3mjp_B* 1hbr_B* 3fs4_B* 3a59_B* 1wmu_B* 1v75_B* 2z6n_B* 3at5_B* 3at6_B*
Probab=39.38 E-value=13 Score=28.48 Aligned_cols=20 Identities=30% Similarity=0.199 Sum_probs=16.6
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS 255 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~ 255 (272)
|=++.||+.+ ++|.-|++|+
T Consensus 30 rlF~~~P~~k--------~~F~~f~~~~ 49 (146)
T 2r80_B 30 RLLIVYPWTQ--------RFFSSFGNLS 49 (146)
T ss_dssp HHHHHSGGGG--------GGGGGGCCCS
T ss_pred HHHHHChhHH--------HHHHHhcCCC
Confidence 4568899988 7888888887
No 193
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=39.05 E-value=30 Score=25.35 Aligned_cols=35 Identities=11% Similarity=0.222 Sum_probs=22.0
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCC
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ 132 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~ 132 (272)
....+|++.|++++ |.|..-.+--+||...+..+.
T Consensus 73 ~~~~~e~~~~~~~~--D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 73 GMSKEDAQGMVREG--DLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp CCCHHHHHHHHHHH--CSSCSSSBCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh--CCCCCCCCcHHHHHHHHHHhC
Confidence 56677888888876 444444555566766655443
No 194
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=39.02 E-value=28 Score=25.33 Aligned_cols=87 Identities=23% Similarity=0.287 Sum_probs=54.3
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhc-CC-----hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc-
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQ-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK- 166 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~-----~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~- 166 (272)
...+..+|+..++.++-. |..-.+.-.+|...+.. +. .++++.|--| -..=+|+|-..||.+=++.
T Consensus 40 ~~~~~~~~~~~~~~~~d~--~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~-----D~d~~G~I~~~El~~~l~~~ 112 (148)
T 2lmt_A 40 GQNPTEAELQDLIAEAEN--NNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIF-----DRDGDGFISPAELRFVMINL 112 (148)
T ss_dssp TCCCCHHHHHHHHHHHHT--TSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHH-----HSSCSSEECHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHhccc--CCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHH-----CCCCcCcCcHHHHHHHHHHc
Confidence 556777888888887644 44445666677554332 22 3466666544 5667899988888765543
Q ss_pred ----cCccHHHHHhhhccchhhhhcchh
Q 024138 167 ----TNPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 167 ----~NP~lae~F~lMsRDEARHAGFlN 190 (272)
+...+.++|..+-.| +-|.|+
T Consensus 113 g~~~~~~e~~~l~~~~D~d---~dG~I~ 137 (148)
T 2lmt_A 113 GEKVTDEEIDEMIREADFD---GDGMIN 137 (148)
T ss_dssp TCCCCHHHHHHHHHHHCCS---CCSSEE
T ss_pred CccccHHHHHHHHHHhCCC---CCCeEe
Confidence 234567777776655 456654
No 195
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=38.60 E-value=42 Score=21.69 Aligned_cols=39 Identities=26% Similarity=0.346 Sum_probs=22.9
Q ss_pred ccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHH
Q 024138 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPL 135 (272)
Q Consensus 95 ~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~ 135 (272)
..+..++++.|+.++ |.|..-.+--+||...+...+.+.
T Consensus 40 ~~~~~~~~~~~~~~~--D~~~dg~i~~~eF~~~~~~~~~~~ 78 (81)
T 1c7v_A 40 EPLTDAEVEEAMKEA--DEDGNGVIDIPEFMDLIKKSKNAL 78 (81)
T ss_dssp CCCCHHHHHHHHHHH--CSSGGGSEEHHHHHHHHHCC----
T ss_pred CCCCHHHHHHHHHHh--CCCCCCcCcHHHHHHHHHhhhhhh
Confidence 455677888888876 455555566667766665554443
No 196
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=38.51 E-value=99 Score=21.56 Aligned_cols=17 Identities=24% Similarity=0.296 Sum_probs=8.6
Q ss_pred hccchhhHHHHHHhhhh
Q 024138 148 TAEFSGFLLYKELGRRL 164 (272)
Q Consensus 148 TAEFSGfLLYKEl~rrl 164 (272)
-..=+|.|-..|+.+-+
T Consensus 85 D~d~~G~i~~~e~~~~l 101 (155)
T 3ll8_B 85 DMDKDGYISNGELFQVL 101 (155)
T ss_dssp CTTCSSCBCHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHH
Confidence 34445555555554444
No 197
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=38.29 E-value=18 Score=32.89 Aligned_cols=113 Identities=12% Similarity=0.011 Sum_probs=58.9
Q ss_pred HHHHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh-------hhcccccCceee-
Q 024138 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM-------YVKYTFFKPKFI- 208 (272)
Q Consensus 137 ~~FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df-------~rkYTfF~PKfI- 208 (272)
+.++-++.=.|.+|=+-=-+-.++.+- ..-.|.+.++...=.+||+||.+|--..+... .|.+ +.+-.-
T Consensus 183 ~~~l~~~a~~lvaEeiid~~~r~~~~D-~~vQP~vR~v~riHv~DEaRH~~fare~~~~~~~~l~~~~R~~--~~~~l~~ 259 (336)
T 3chh_A 183 ERDIAVLVWGAVAETCINALLALLARD-ATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMNEQQRRA--LVRCLPI 259 (336)
T ss_dssp HHHHHHHHHHHHHHHSBCHHHHHHHTC-SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHH--HHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHH
Confidence 344444443444444433333344332 12369999999999999999999988766655 2221 111100
Q ss_pred eeehhcccccchhHHHHHHhH-----------HhhCCCCCCCCCccccccchhhhhh
Q 024138 209 FYATYLSEKIGYWRYITIYRH-----------LKANPDSSMTGRQSCGPDFSASRCM 254 (272)
Q Consensus 209 fYATYLSEKIGYwRYItIyRH-----------Le~nPe~r~~~~~~~~PIF~~Fe~~ 254 (272)
+...|+.--+++|+ .||++ -..||.++..-++.+-|+.++++..
T Consensus 260 ~l~af~~~~~~~~~--~vy~~aGl~~~~~~~~~~~~~~~r~~~~~~~~~l~~fl~e~ 314 (336)
T 3chh_A 260 ALEAFAEQDLSALL--LELNAAGIRGAEEIVGDLRSTAGGTRLVRDFSGARKMVEQL 314 (336)
T ss_dssp HHHHHHCCCTHHHH--HHHHHHTCTTHHHHHHHCC-------CCCBCHHHHHHHHHT
T ss_pred HHHHHHHhHhhcCH--HHHHHCCCCcHHHHHHHHhCchHHHHHHHHHHHHHHHHHHc
Confidence 01123333445665 34444 4566667766677778888887764
No 198
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=38.25 E-value=32 Score=24.26 Aligned_cols=51 Identities=14% Similarity=0.069 Sum_probs=28.8
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrl 164 (272)
|.|..-++--+||...+..+....-..=++-+.+.+ -=+|.|-|.|..+-+
T Consensus 94 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l 144 (146)
T 2qac_A 94 DNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDI 144 (146)
T ss_dssp CTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHH
Confidence 677777787788887776542111111122222222 447888888876655
No 199
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=38.07 E-value=1e+02 Score=22.42 Aligned_cols=29 Identities=7% Similarity=-0.107 Sum_probs=16.0
Q ss_pred ccchhHHHHHHhHHhhCCCCCCCCCcccccc
Q 024138 217 KIGYWRYITIYRHLKANPDSSMTGRQSCGPD 247 (272)
Q Consensus 217 KIGYwRYItIyRHLe~nPe~r~~~~~~~~PI 247 (272)
+|.|--|+.+.+.+-..++...+| .+.|+
T Consensus 161 ~i~~~eF~~~~~~~~~s~d~~~~g--~~g~~ 189 (191)
T 1uhk_A 161 QLDVDEMTRQHLGFWYTMDPACEK--LYGGA 189 (191)
T ss_dssp CEEHHHHHHHHHHHHTTCCGGGTT--TTTTS
T ss_pred cCcHHHHHHHHHHHhcCCCCCCcc--ccCCC
Confidence 566777777766655444433334 44454
No 200
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=37.85 E-value=47 Score=28.98 Aligned_cols=81 Identities=17% Similarity=0.242 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc---CccHHHHH
Q 024138 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIF 175 (272)
Q Consensus 99 ~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~---NP~lae~F 175 (272)
+++++.+++++ |-|..-.+--+||...+........+.-+.-+-+.+-..=+|+|-..|+.+-++.. ...+.++|
T Consensus 381 ~~~~~~~~~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~ 458 (484)
T 3nyv_A 381 EHEVDQVLDAV--DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVL 458 (484)
T ss_dssp HHHHHHHHHHH--TCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHH
Confidence 34444454444 55666667777886665444322223333334444566678888888888777542 23456666
Q ss_pred hhhccc
Q 024138 176 SLMSRD 181 (272)
Q Consensus 176 ~lMsRD 181 (272)
..+-.|
T Consensus 459 ~~~D~d 464 (484)
T 3nyv_A 459 SEVDKN 464 (484)
T ss_dssp HHHCTT
T ss_pred HHhcCC
Confidence 665544
No 201
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=37.85 E-value=37 Score=23.10 Aligned_cols=76 Identities=18% Similarity=0.284 Sum_probs=36.4
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccChhHHHHHhc---CChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc------
Q 024138 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------ 167 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~---l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~------ 167 (272)
+.++|++.|++++- ..-.+-=+||...+.. -..++++.|-. +-..=+|+|-..|+.+-++.-
T Consensus 6 ~t~~e~~~~~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~-----~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (109)
T 1rwy_A 6 LSAEDIKKAIGAFT----AADSFDHKKFFQMVGLKKKSADDVKKVFHI-----LDKDKSGFIEEDELGSILKGFSSDARD 76 (109)
T ss_dssp SCHHHHHHHHHTTC----STTCCCHHHHHHHHTGGGSCHHHHHHHHHH-----HSTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred CCHHHHHHHHHHcC----CCCcEeHHHHHHHHhcCcchHHHHHHHHHH-----HCCCCCCeEcHHHHHHHHHHHhccCCC
Confidence 44556666666543 1222333455444321 12234444433 344556777777776655432
Q ss_pred --CccHHHHHhhhccc
Q 024138 168 --NPVVAEIFSLMSRD 181 (272)
Q Consensus 168 --NP~lae~F~lMsRD 181 (272)
...+.++|..+-.|
T Consensus 77 ~~~~~~~~~~~~~D~~ 92 (109)
T 1rwy_A 77 LSAKETKTLMAAGDKD 92 (109)
T ss_dssp CCHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHCCC
Confidence 23355555555433
No 202
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=37.44 E-value=63 Score=28.83 Aligned_cols=98 Identities=10% Similarity=0.035 Sum_probs=57.8
Q ss_pred HHHhcCChHHHHHHHHHHH-----hhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhhhhhc
Q 024138 126 EAADKMQGPLRQIFVEFLE-----RSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSVMYVK 199 (272)
Q Consensus 126 ~~~d~l~~~~R~~FveFLe-----rScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~Df~rk 199 (272)
++|.+|+++.|..+.--|- .|..++.-+ .+...+.. .+|.+.-.+...+=+|++|+=.-..-+.-+..
T Consensus 53 ~dw~~Lt~~Er~~~~~vL~~ft~~D~iv~~nl~-----~~~~~v~~e~~pE~~~~l~~q~~~EaiHs~sYs~il~tl~~- 126 (323)
T 3ee4_A 53 ADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQ-----PFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGI- 126 (323)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTH-----HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHhHHHHHHHH-----HHHHHhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 4677888888877643221 111222111 33333321 36999999999999999999765555544421
Q ss_pred ccccCceeeeeeh----hcccccchhHHHHHHhHHhhCCC
Q 024138 200 YTFFKPKFIFYAT----YLSEKIGYWRYITIYRHLKANPD 235 (272)
Q Consensus 200 YTfF~PKfIfYAT----YLSEKIGYwRYItIyRHLe~nPe 235 (272)
.|+ +|.+. .|-.| -+|+.+..|+.+..+|+
T Consensus 127 ----~~~-~f~~~~~~p~lr~k-~~~~l~~~~~~~~~~~~ 160 (323)
T 3ee4_A 127 ----SED-LHRYLDDLPAYRQI-FYAELPECLNALSADPS 160 (323)
T ss_dssp ----CSC-CGGGGTTCHHHHHH-HHTHHHHHHHHHHHCCC
T ss_pred ----CHH-HHHHHHcCHHHHHH-HHHHHHHHHHhhccCCC
Confidence 222 33221 33334 36788888888888876
No 203
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=37.38 E-value=22 Score=27.35 Aligned_cols=58 Identities=17% Similarity=0.127 Sum_probs=47.1
Q ss_pred HHHHHhhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhhhh
Q 024138 140 VEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSVMY 197 (272)
Q Consensus 140 veFLerScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~Df~ 197 (272)
.+-|+.....|-...-.|+++..-..+ ..|.+++++.-+.++|-.|+-.|...+..+.
T Consensus 86 ~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~l~eEe~h~~~l~~~l~~i~ 144 (174)
T 3qb9_A 86 REQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMD 144 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777787778889998866543 5899999999999999999999998777664
No 204
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=37.24 E-value=39 Score=22.81 Aligned_cols=29 Identities=10% Similarity=0.294 Sum_probs=13.3
Q ss_pred cHHHHHHHHHHHhhccCCCCcccChhHHHHH
Q 024138 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAA 128 (272)
Q Consensus 98 ~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~ 128 (272)
..++++.|++++ |.|..-.+-=+||...+
T Consensus 54 ~~~~~~~l~~~~--D~~~dg~I~~~EF~~~~ 82 (99)
T 1qls_A 54 DPGVLDRMMKKL--DLDSDGQLDFQEFLNLI 82 (99)
T ss_dssp CTHHHHHHHHHH--CTTCSSSBCHHHHHHHH
T ss_pred CHHHHHHHHHHh--CCCCCCcCcHHHHHHHH
Confidence 344556666554 33333334444444433
No 205
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=36.91 E-value=18 Score=26.67 Aligned_cols=13 Identities=31% Similarity=0.248 Sum_probs=5.8
Q ss_pred hhhHHHHHHhhhh
Q 024138 152 SGFLLYKELGRRL 164 (272)
Q Consensus 152 SGfLLYKEl~rrl 164 (272)
+|.|-..|+.+-+
T Consensus 91 ~G~i~~~el~~~l 103 (173)
T 1alv_A 91 SGTIGSSELPGAF 103 (173)
T ss_dssp CSSBCTTTHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 4444444444433
No 206
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=36.90 E-value=28 Score=26.98 Aligned_cols=58 Identities=19% Similarity=0.191 Sum_probs=48.7
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-.+-|+.....|-...-.|+++.....+ ..|..+.+|.-+..||..|+-.|...|..+
T Consensus 88 ~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~l 146 (179)
T 1nfv_A 88 VPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHI 146 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667788888888888899998886533 589999999999999999999998877665
No 207
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=36.69 E-value=56 Score=21.32 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=21.4
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCCh
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQG 133 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~ 133 (272)
....+|++.++.++ |.|..-.+--+||...+...+.
T Consensus 42 ~~~~~~~~~~~~~~--D~~~dg~i~~~eF~~~~~~~~~ 77 (86)
T 2opo_A 42 SVTPDEVRRMMAEI--DTDGDGFISFDEFTDFARANRG 77 (86)
T ss_dssp TCCHHHHHHHHHHH--CTTCSSEECHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHHHh--CCCCCCcCcHHHHHHHHHHCcc
Confidence 45566777777765 4444445655667666555544
No 208
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=35.98 E-value=24 Score=27.05 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=25.4
Q ss_pred hhhhccchhhHHHHHHhhhhhc-----cCccHHHHHhhhccchhhhhcchhh
Q 024138 145 RSCTAEFSGFLLYKELGRRLKK-----TNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 145 rScTAEFSGfLLYKEl~rrlk~-----~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
+.+-..=+|.|-|.|...-+.. ....+.++|..+-+| +-|+|+.
T Consensus 53 ~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d---~dG~Is~ 101 (188)
T 1s6i_A 53 DAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKD---GSGYITL 101 (188)
T ss_dssp HHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTT---CSSEEEH
T ss_pred HHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHHCCC---CCCcCcH
Confidence 3334444566666665544322 234688999988665 4566654
No 209
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=35.86 E-value=36 Score=23.60 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=8.6
Q ss_pred cchhhHHHHHHhhhh
Q 024138 150 EFSGFLLYKELGRRL 164 (272)
Q Consensus 150 EFSGfLLYKEl~rrl 164 (272)
.=.|.|-|.|...-+
T Consensus 77 d~dG~I~~~EF~~~~ 91 (94)
T 2kz2_A 77 DGDGQVNYEEFVQMM 91 (94)
T ss_dssp TCSSSBCHHHHHHHH
T ss_pred CCCCcEeHHHHHHHH
Confidence 345666666655444
No 210
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=35.31 E-value=25 Score=27.85 Aligned_cols=70 Identities=13% Similarity=-0.001 Sum_probs=33.0
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc------cCccHHHHHhhhccc
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAEIFSLMSRD 181 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~------~NP~lae~F~lMsRD 181 (272)
|-|..-.+--+||...+..+.......-+..+-+.+-..=+|+|-..|+.+=++. .-..+.++|..+-.|
T Consensus 107 D~d~~G~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d 182 (226)
T 2lvv_A 107 KVKGVGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTN 182 (226)
T ss_dssp HHSCCCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCS
T ss_pred CCCCCCcCCHHHHHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCC
Confidence 5566556666677553221111111111222223334455677777777665532 122355666655544
No 211
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=35.30 E-value=52 Score=31.79 Aligned_cols=92 Identities=16% Similarity=0.234 Sum_probs=0.0
Q ss_pred ChHHHhhhhcccc--------cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccch
Q 024138 81 DFDEMETLFNTEI--------NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFS 152 (272)
Q Consensus 81 DFd~m~~lf~~ei--------d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFS 152 (272)
|.+++.++++. + ......++++.|++.+ |-|..-.+-=+||...+..+ .+.+++|-.| -..=+
T Consensus 549 s~~El~~~L~~-l~~~~~~~~g~~~s~~~~~~l~~~~--D~d~~G~I~f~EF~~l~~~~-~~l~~~F~~~-----D~d~d 619 (714)
T 3bow_A 549 SAFELQTILRR-VLAKREDIKSDGFSIETCKIMVDML--DEDGSGKLGLKEFYILWTKI-QKYQKIYREI-----DVDRS 619 (714)
T ss_dssp CHHHHHHHHHH-HHTTCTTSCCSCCCHHHHHHHHHHH--CCSSCSSBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCC
T ss_pred CHHHHHHHHHH-HhhhcccccCCCCCHHHHHHHHHHh--CCCCCCcCcHHHHHHHHHHH-HHHHHHHHHh-----CCCCC
Q ss_pred hhHHHHHHhhhhhc-----cCccHHHHHhhhccch
Q 024138 153 GFLLYKELGRRLKK-----TNPVVAEIFSLMSRDE 182 (272)
Q Consensus 153 GfLLYKEl~rrlk~-----~NP~lae~F~lMsRDE 182 (272)
|.|-..||.+=|+. .+.++.++|..+. |.
T Consensus 620 G~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~ 653 (714)
T 3bow_A 620 GTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DD 653 (714)
T ss_dssp SSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CT
T ss_pred CeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CC
No 212
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=35.11 E-value=27 Score=25.86 Aligned_cols=75 Identities=11% Similarity=0.103 Sum_probs=40.9
Q ss_pred ccHHHHHhhhccchhhhhcchhhh-hhhhhhcccccCceee--eeehh---cccccchhHHHHHHhHHhhCCCCCCCCCc
Q 024138 169 PVVAEIFSLMSRDEARHAGYECAS-KSVMYVKYTFFKPKFI--FYATY---LSEKIGYWRYITIYRHLKANPDSSMTGRQ 242 (272)
Q Consensus 169 P~lae~F~lMsRDEARHAGFlNka-l~Df~rkYTfF~PKfI--fYATY---LSEKIGYwRYItIyRHLe~nPe~r~~~~~ 242 (272)
..+.++|..+-+| +-|+|+.. +..+-+.+- ..+.-+ ++..+ =.-+|.|--++.+++.+-.-++-..+|.+
T Consensus 109 ~~~~~~F~~~D~d---~dG~I~~~E~~~~l~~~g-~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~s~d~~~~~~~ 184 (191)
T 2ccm_A 109 KYMNFMFDVNDTS---GDNIIDKHEYSTVYMSYG-IPKSDCDAAFDTLSDGGKTMVTREIFARLWTEYFVSNDRGAKGNH 184 (191)
T ss_dssp HHHHHHHHHHCTT---CSSBCCHHHHHHHHHTTT-CCHHHHHHHHHHHTTTTTSCCBHHHHHHHHHHHHHCCCTTCGGGG
T ss_pred HHHHHHHHHhCCC---CCCcCcHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhcCCCCCCCcce
Confidence 4578888887766 45666643 222211111 111100 00111 13467788888888887766666666777
Q ss_pred ccccc
Q 024138 243 SCGPD 247 (272)
Q Consensus 243 ~~~PI 247 (272)
.+.|+
T Consensus 185 ~~g~~ 189 (191)
T 2ccm_A 185 LFGTL 189 (191)
T ss_dssp TTSCC
T ss_pred eccCC
Confidence 77765
No 213
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=35.11 E-value=1.3e+02 Score=21.98 Aligned_cols=63 Identities=13% Similarity=0.057 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhccCCCCcccChhHHHHHhcCCh-----------HHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQG-----------PLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~-----------~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
+++.+++.+ |.|..-.+--+||...+..+.. +..+.+++.+-+.+-..=+|+|-..|+.+=++
T Consensus 67 ~~~~l~~~~--D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 140 (195)
T 1qv0_A 67 CVEAFFRGC--GMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGK 140 (195)
T ss_dssp HHHHHHHHT--TCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHH
T ss_pred HHHHHHHHc--CCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 455566554 4455555555666554432211 11222222333444555677777777766554
No 214
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=34.88 E-value=1.3e+02 Score=22.02 Aligned_cols=78 Identities=10% Similarity=0.045 Sum_probs=49.1
Q ss_pred hccCCCCcccChhHHHHHhcCC---------hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC---ccHHHHHhhh
Q 024138 111 TDYNQTHFVRNKEFKEAADKMQ---------GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN---PVVAEIFSLM 178 (272)
Q Consensus 111 ~DyNr~HFvR~~eF~~~~d~l~---------~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N---P~lae~F~lM 178 (272)
.|.|..-.+--+||...+..+. ++..+..+.-+-+.+-..=+|.|-+.|+.+=++.-+ ..+.++|..+
T Consensus 73 ~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~ 152 (191)
T 2ccm_A 73 ADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTL 152 (191)
T ss_dssp HCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred cCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHh
Confidence 3566666677778866655431 122333445555566677789999999988775432 3567778777
Q ss_pred ccchhhhhcchhh
Q 024138 179 SRDEARHAGYECA 191 (272)
Q Consensus 179 sRDEARHAGFlNk 191 (272)
-.| +-|.|+.
T Consensus 153 D~d---~dG~i~~ 162 (191)
T 2ccm_A 153 SDG---GKTMVTR 162 (191)
T ss_dssp TTT---TTSCCBH
T ss_pred CCC---CCCCcCH
Confidence 665 4566653
No 215
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=34.68 E-value=58 Score=23.74 Aligned_cols=86 Identities=13% Similarity=0.160 Sum_probs=42.4
Q ss_pred HHHHHHHHHhhccCCCCcccChhHH-----HHHhcCChHHHHH-----HHHHHHhhhhccchhhHHHHHHhhhhh-----
Q 024138 101 EFEALLQEFKTDYNQTHFVRNKEFK-----EAADKMQGPLRQI-----FVEFLERSCTAEFSGFLLYKELGRRLK----- 165 (272)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~-----~~~d~l~~~~R~~-----FveFLerScTAEFSGfLLYKEl~rrlk----- 165 (272)
++..+...| |.|..-.+--+||. ..+..+....... -++-|.+.+-..=+|.|-|.|...-+.
T Consensus 17 ~l~~~F~~~--D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~ 94 (191)
T 1uhk_A 17 RHKHMFNFL--DVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATD 94 (191)
T ss_dssp HHHHHHHHH--CTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHhhc--cCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcc
Confidence 334444433 55555555555665 4444332111111 344444455444556666665543221
Q ss_pred ------ccC-ccHH----HHHhhhccchhhhhcchhh
Q 024138 166 ------KTN-PVVA----EIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 166 ------~~N-P~la----e~F~lMsRDEARHAGFlNk 191 (272)
... ..+. ++|..+-+| +-|+|+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~F~~~D~d---~~G~Is~ 128 (191)
T 1uhk_A 95 ELEKYAKNEPTLIRIWGDALFDIVDKD---QNGAITL 128 (191)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHCTT---CSSEECH
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhcCC---CCCcCcH
Confidence 111 2233 889888776 5688876
No 216
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=34.51 E-value=69 Score=21.70 Aligned_cols=83 Identities=19% Similarity=0.235 Sum_probs=46.9
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC---ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-----
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----- 167 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~----- 167 (272)
.+..+|++.|+.++- . .--+--+||...+..- ..++++.|-.| -..=+|+|-..|+.+-++.-
T Consensus 6 ~~t~~e~~~~~~~~d--~--~g~i~~~ef~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~~~~~~g~ 76 (110)
T 1pva_A 6 LLKADDIKKALDAVK--A--EGSFNHKKFFALVGLKAMSANDVKKVFKAI-----DADASGFIEEEELKFVLKSFAADGR 76 (110)
T ss_dssp HSCHHHHHHHHHHTC--S--TTCCCHHHHHHHHTCTTSCHHHHHHHHHHH-----CTTCSSSBCHHHHHTGGGGTCTTCC
T ss_pred cCCHHHHHHHHHhcC--C--CCcCcHHHHHHHHccCcchHHHHHHHHHHh-----CCCCCCcCcHHHHHHHHHHHhhcCC
Confidence 456678888888764 1 1123345676655311 22344555433 45567888888888777643
Q ss_pred ---CccHHHHHhhhccchhhhhcchh
Q 024138 168 ---NPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 168 ---NP~lae~F~lMsRDEARHAGFlN 190 (272)
...+.++|..+-.| +-|.|+
T Consensus 77 ~~~~~~~~~~~~~~d~~---~dg~i~ 99 (110)
T 1pva_A 77 DLTDAETKAFLKAADKD---GDGKIG 99 (110)
T ss_dssp CCCHHHHHHHHHHHCTT---CSSSBC
T ss_pred CCCHHHHHHHHHHhCCC---CCCeEc
Confidence 23456666665544 445554
No 217
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=34.43 E-value=46 Score=22.69 Aligned_cols=85 Identities=18% Similarity=0.176 Sum_probs=49.0
Q ss_pred cccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC---ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc---
Q 024138 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT--- 167 (272)
Q Consensus 94 d~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~--- 167 (272)
..++.++|+++|++++- ..-.+-=+||...+..- ..++++.|-.| -..=+|.|-..|+.+-++.-
T Consensus 4 g~~~~~~e~~~~~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~~~~~~ 74 (109)
T 1bu3_A 4 SGILADADVAAALKACE----AADSFNYKAFFAKVGLTAKSADDIKKAFFVI-----DQDKSGFIEEDELKLFLQVFSAG 74 (109)
T ss_dssp SCSSCHHHHHHHHHHTC----STTCCCHHHHHHHHTGGGSCHHHHHHHHHHH-----CTTCSSSEEHHHHHTHHHHHSTT
T ss_pred cccCCHHHHHHHHHHhC----CCCcCcHHHHHHHHHcChhhHHHHHHHHHHH-----CCCCCCcCcHHHHHHHHHHHccc
Confidence 34566778888888763 22235555676554321 23455555444 45567888888887766532
Q ss_pred -----CccHHHHHhhhccchhhhhcchh
Q 024138 168 -----NPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 168 -----NP~lae~F~lMsRDEARHAGFlN 190 (272)
...+.++|..+-.| +-|.|+
T Consensus 75 g~~~~~~~~~~~~~~~D~~---~dg~i~ 99 (109)
T 1bu3_A 75 ARALTDAETKAFLKAGDSD---GDGAIG 99 (109)
T ss_dssp CCCCCHHHHHHHHHHHCTT---CSSEEC
T ss_pred CCCCCHHHHHHHHHHhCCC---CCCcEe
Confidence 23566666665444 345554
No 218
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=34.40 E-value=31 Score=24.01 Aligned_cols=63 Identities=14% Similarity=0.154 Sum_probs=33.7
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHH
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEI 174 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~ 174 (272)
|.|..-++--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+... ++.++.+
T Consensus 42 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~~~~l~~i 105 (107)
T 2d58_A 42 DLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMI 105 (107)
T ss_dssp CCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSSCCHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcccHHHHHH
Confidence 66666666667776666554222112223333344444556777777776655443 4555543
No 219
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=34.22 E-value=1.1e+02 Score=21.63 Aligned_cols=19 Identities=26% Similarity=0.424 Sum_probs=11.8
Q ss_pred ccHHHHHhhhccchhhhhcchh
Q 024138 169 PVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 169 P~lae~F~lMsRDEARHAGFlN 190 (272)
..+.++|..+-+| +-|+|+
T Consensus 83 ~~l~~~F~~~D~d---~~G~I~ 101 (148)
T 1exr_A 83 EELIEAFKVFDRD---GNGLIS 101 (148)
T ss_dssp HHHHHHHHHHSTT---CSSCBC
T ss_pred HHHHHHHHHhCCC---CCCcCC
Confidence 4566778776555 456655
No 220
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=34.03 E-value=47 Score=29.40 Aligned_cols=75 Identities=19% Similarity=0.330 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcC-----ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC---ccH
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN---PVV 171 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-----~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N---P~l 171 (272)
++++.+++++ |-|..-.+--+||...+... ..+.++.|-. +-..=+|.|-..|+.+-++..+ ..+
T Consensus 399 ~~~~~~~~~~--D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~-----~D~d~dG~Is~~El~~~l~~~~~~~~~~ 471 (504)
T 3q5i_A 399 EEVDNILKEV--DFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNL-----FDTDKSGKITKEELANLFGLTSISEKTW 471 (504)
T ss_dssp HHHHHHHHHH--CTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHH-----HCTTCCSEECHHHHHHHTTCSCCCHHHH
T ss_pred HHHHHHHHHh--CCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHH-----hcCCCCCcCcHHHHHHHHhhCCCCHHHH
Confidence 3444444444 44555556666776655433 2344455543 3556689999999988775422 345
Q ss_pred HHHHhhhccc
Q 024138 172 AEIFSLMSRD 181 (272)
Q Consensus 172 ae~F~lMsRD 181 (272)
.++|..+-.|
T Consensus 472 ~~~~~~~D~d 481 (504)
T 3q5i_A 472 NDVLGEADQN 481 (504)
T ss_dssp HHHHHTTCSS
T ss_pred HHHHHHhCCC
Confidence 6666665544
No 221
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=33.85 E-value=32 Score=25.17 Aligned_cols=56 Identities=16% Similarity=0.087 Sum_probs=44.7
Q ss_pred HHHHHhhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhh
Q 024138 140 VEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSV 195 (272)
Q Consensus 140 veFLerScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~D 195 (272)
.+-|+.....|-...-.|+++.+...+ ..|..++++.-+..||-+|+-+|...+.+
T Consensus 87 ~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~ 143 (149)
T 2qqy_A 87 REMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADETNHMEELDRLLND 143 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 455666677777778889998877653 57999999999999999999999887654
No 222
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=33.61 E-value=58 Score=22.64 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=39.0
Q ss_pred ccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCC--------hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc
Q 024138 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ--------GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (272)
Q Consensus 95 ~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~--------~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~ 166 (272)
..+..+++..++. |..--+-=+||...+..+. ..+++.|- .+-..=+|+|-..|+.+=++.
T Consensus 36 ~~~~~~~~~~~~~------~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~-----~~D~d~~G~i~~~el~~~l~~ 104 (140)
T 1ggw_A 36 QNPTLAEITEIES------TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQ-----VFDKDATGMIGVGELRYVLTS 104 (140)
T ss_dssp CCCCHHHHHHHHT------TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHH-----TTCSSCSSCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHh------CCCCcCcHHHHHHHHHHHhcccCcccHHHHHHHHH-----HhCCCCCCcEeHHHHHHHHHH
Confidence 3444555555554 3334455556665555442 33444443 334556788888888776643
Q ss_pred c-----CccHHHHHhhh
Q 024138 167 T-----NPVVAEIFSLM 178 (272)
Q Consensus 167 ~-----NP~lae~F~lM 178 (272)
- ...+.++|..+
T Consensus 105 ~g~~~~~~~~~~~~~~~ 121 (140)
T 1ggw_A 105 LGEKLSNEEMDELLKGV 121 (140)
T ss_dssp HHSCSCHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHHHhc
Confidence 2 23455555554
No 223
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=33.57 E-value=51 Score=21.41 Aligned_cols=65 Identities=9% Similarity=0.087 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhh-ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhh
Q 024138 100 AEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (272)
Q Consensus 100 ~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrl 164 (272)
++.+.+.+-|+. |.|..-++--+||...+..+....-..-++-|.+.+-..=+|.|-|.|..+-+
T Consensus 11 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~ 76 (85)
T 2ktg_A 11 EEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIM 76 (85)
T ss_dssp HHHHHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 344444444432 67777777777887777665333333334445555555556777777655433
No 224
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=33.46 E-value=33 Score=26.45 Aligned_cols=59 Identities=20% Similarity=0.162 Sum_probs=49.9
Q ss_pred HHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 138 ~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
.-|+.|-+-...|+.....|-=.++-.++. -+.+++.|.--|.+|-.||--|=+-+.+.
T Consensus 6 kvi~~LN~~l~~El~A~~~Y~~~a~~~~~~g~~~~a~~f~~~a~eE~~HA~~l~~~i~~l 65 (159)
T 4am5_A 6 KVIEYLNRGLRSELTAVSQYWLHYRMLEDWGYKDLAKKWRAESIEEMAHADKFVERILFL 65 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999888888654 58999999999999999997665544444
No 225
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=33.37 E-value=22 Score=25.32 Aligned_cols=75 Identities=16% Similarity=0.234 Sum_probs=36.2
Q ss_pred cccccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc--
Q 024138 90 NTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-- 167 (272)
Q Consensus 90 ~~eid~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-- 167 (272)
+.+-|-...-+||-+++......... + ......++..|-.| -..=+|+|-..|+.+-++.-
T Consensus 60 D~~~~g~i~~~eF~~~~~~~~~~~~~------~------~~~~~~~~~~F~~~-----D~d~~G~I~~~el~~~l~~~g~ 122 (158)
T 2jnf_A 60 DPFGNGDIDFDSFKIIGARFLGEEVN------P------EQMQQELREAFRLY-----DKEGNGYISTDVMREILAELDE 122 (158)
T ss_dssp CTTCCSEECHHHHHHHHHHHCCCCCC------T------TTTSSTHHHHHHHH-----CSSSSSSEEHHHHHHHHHHHCT
T ss_pred CCCCCCcCcHHHHHHHHHHHhccccc------h------hhHHHHHHHHHHHh-----CCCCCCeEcHHHHHHHHHHhCC
Confidence 33334456778888888765432110 0 01122334444322 33446666666665554432
Q ss_pred ---CccHHHHHhhhccc
Q 024138 168 ---NPVVAEIFSLMSRD 181 (272)
Q Consensus 168 ---NP~lae~F~lMsRD 181 (272)
...+.++|..+-.|
T Consensus 123 ~~~~~~~~~~~~~~D~d 139 (158)
T 2jnf_A 123 TLSSEDLDAMIDEIDAD 139 (158)
T ss_dssp TCCHHHHHHHHHHHCSS
T ss_pred cCCHHHHHHHHHHhCCC
Confidence 23456666665444
No 226
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=33.17 E-value=52 Score=30.95 Aligned_cols=75 Identities=20% Similarity=0.302 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhhccCCCCcccChhHHHHHhcCC------hHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-----C
Q 024138 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ------GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-----N 168 (272)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~------~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-----N 168 (272)
++++.|++++ |.|..-.+-=+||...|..+. .+.+++| +.+-..=+|+|-..||.+=|+.. +
T Consensus 348 eel~~Lf~~~--D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aF-----k~fD~D~dG~Is~eELr~~L~~lG~~ls~ 420 (450)
T 3sg6_A 348 AELQDMINEV--DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF-----RVFDKDGNGYISAAELRHVMTNLGEKLTD 420 (450)
T ss_dssp HHHHHHHHTT--CTTSSSSEEHHHHHHHHHC------CHHHHHHHH-----HHHCTTCSSEECHHHHHHHHHHHTCCCCH
T ss_pred HHHHHHHHHh--ccCCCCcccHHHHHHHHHhhccccchhhHHHHHH-----HHhCCCCCCeEeHHHHHHHHHHhCCCCCH
Confidence 3334444333 344444444556666655432 1233333 33345557888777777766533 2
Q ss_pred ccHHHHHhhhccc
Q 024138 169 PVVAEIFSLMSRD 181 (272)
Q Consensus 169 P~lae~F~lMsRD 181 (272)
.++.++|..+..|
T Consensus 421 eei~~Lf~~~D~D 433 (450)
T 3sg6_A 421 EEVDEMIREADID 433 (450)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCC
Confidence 3455666655544
No 227
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=33.00 E-value=28 Score=26.02 Aligned_cols=31 Identities=13% Similarity=0.164 Sum_probs=12.8
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccChhHHHHHh
Q 024138 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD 129 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d 129 (272)
...+|++.|+.++ |.|..-.+-=+||...+.
T Consensus 81 ~~~~~~~~l~~~~--D~d~dg~I~~~eF~~~~~ 111 (147)
T 1wy9_A 81 KTHLELKRLIREV--SSGSEETFSYSDFLRMML 111 (147)
T ss_dssp CCHHHHHHHHHHH--CSSCTTEECHHHHHHHHC
T ss_pred CCHHHHHHHHHHh--CCCCCCcEeHHHHHHHHH
Confidence 3344444444443 333333343344444433
No 228
>1cg5_A Protein (hemoglobin); oxygen transport; HET: HEM; 1.60A {Dasyatis akajei} SCOP: a.1.1.2 PDB: 1cg8_A*
Probab=32.38 E-value=19 Score=27.50 Aligned_cols=38 Identities=16% Similarity=0.187 Sum_probs=26.0
Q ss_pred HhHHhhCCCCCCCCCccccccchhhhhhh--------hhhhhhhHHHhhhcccC
Q 024138 227 YRHLKANPDSSMTGRQSCGPDFSASRCMS--------QCISMTASVLLSMRALD 272 (272)
Q Consensus 227 yRHLe~nPe~r~~~~~~~~PIF~~Fe~~~--------~~~~~~~~~~~~~~~~~ 272 (272)
.|=++.||+.+ ++|.-|.+++ |......++......||
T Consensus 30 ~rlF~~~P~~k--------~~F~~f~~~~~~n~~~~~h~~~v~~al~~~v~~ld 75 (141)
T 1cg5_A 30 ARLFELHPQTK--------TYFSKFSGFEACNEQVKKHGKRVMNALADATHHLD 75 (141)
T ss_dssp HHHHHHCGGGG--------GGGTTCSCCSTTSHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHCchHH--------HHhHHhCCCCCCCHhHHHHHHHHHHHHHHHHHhHH
Confidence 35568899998 7888888886 66665555554444443
No 229
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=32.18 E-value=43 Score=22.82 Aligned_cols=83 Identities=19% Similarity=0.248 Sum_probs=47.2
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC---ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-----
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----- 167 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~----- 167 (272)
.+..+|++.|++++-. .-.+-=+||...+... ..++++.|-- +-..=+|+|-..|+.+=++.-
T Consensus 5 ~~s~~ei~~~~~~~d~----~g~i~~~eF~~~~~~~~~~~~~l~~~F~~-----~D~d~~G~i~~~el~~~l~~~~~~g~ 75 (109)
T 5pal_A 5 VLKADDINKAISAFKD----PGTFDYKRFFHLVGLKGKTDAQVKEVFEI-----LDKDQSGFIEEEELKGVLKGFSAHGR 75 (109)
T ss_dssp TSCHHHHHHHHHHTCS----TTCCCHHHHHHHHTCTTCCHHHHHHHHHH-----HCTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred cCCHHHHHHHHHHhCC----CCcCcHHHHHHHHhhccCcHHHHHHHHHH-----HCCCCCCcCcHHHHHHHHHHHHHcCC
Confidence 3556777777777743 2233345666655432 2234444433 355667888888887666532
Q ss_pred ---CccHHHHHhhhccchhhhhcchh
Q 024138 168 ---NPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 168 ---NP~lae~F~lMsRDEARHAGFlN 190 (272)
...+.++|..+-.| +-|.|+
T Consensus 76 ~~~~~~~~~~~~~~D~~---~dg~i~ 98 (109)
T 5pal_A 76 DLNDTETKALLAAGDSD---HDGKIG 98 (109)
T ss_dssp CCCHHHHHHHHHHHCTT---CSSSEE
T ss_pred CCCHHHHHHHHHHhCCC---CCCcCc
Confidence 33567777766554 445554
No 230
>1utg_A Uteroglobin; steroid binding; 1.34A {Oryctolagus cuniculus} SCOP: a.101.1.1 PDB: 2utg_A
Probab=31.39 E-value=39 Score=24.34 Aligned_cols=48 Identities=19% Similarity=0.413 Sum_probs=33.9
Q ss_pred cHHHHHHHHHHHhhccCCCCcccC--hhHHHHHhcCChHHHHHHHHHHHhhhhc
Q 024138 98 NQAEFEALLQEFKTDYNQTHFVRN--KEFKEAADKMQGPLRQIFVEFLERSCTA 149 (272)
Q Consensus 98 ~~~E~~Aml~Efr~DyNr~HFvR~--~eF~~~~d~l~~~~R~~FveFLerScTA 149 (272)
..+|..+-|++|..|.. ..+ .++|+..|+|+.++|..+..+|++=-.|
T Consensus 17 s~~~Y~~~l~~y~~~~~----~~~A~~~lK~C~d~ls~e~~~~i~~~l~kI~~S 66 (70)
T 1utg_A 17 TPSSYETSLKEFEPDDT----MKDAGMQMKKVLDSLPQTTRENIMKLTEKIVKS 66 (70)
T ss_dssp CHHHHHHHHHTTCCCHH----HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHhcCCCHH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHcC
Confidence 44567776666544432 222 2789999999999999999999864433
No 231
>2a9g_A Arginine deiminase; arginine degradation pathway, catalyti mechanism, hydrolase; HET: ARG; 2.30A {Pseudomonas aeruginosa} SCOP: d.126.1.4 PDB: 1rxx_A 2abr_A* 2aci_A 2aaf_A*
Probab=31.28 E-value=62 Score=29.51 Aligned_cols=70 Identities=10% Similarity=0.030 Sum_probs=49.4
Q ss_pred cccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 92 EINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 92 eid~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
.++++..++|++++.+-+|.-.=.-|... +-..+.++ +++.|+.|+|....... + |-.+.+++..-|..-
T Consensus 45 ~~~~~~A~~Ehd~f~~~Lr~~GV~V~~l~-~ll~e~l~--~~~~r~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~ 114 (418)
T 2a9g_A 45 VIWVNQAKRDHFDFVTKMRERGIDVLEMH-NLLTETIQ--NPEALKWILDRKITADS--V-GLGLTSELRSWLESL 114 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTTCEEEEHH-HHHHHHHT--SHHHHHHHHHHHSSTTT--T-CTTTHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEch-HHHHHHhc--CHHHHHHHHHHHhhhcc--c-chHHHHHHHHHHHcC
Confidence 35888899999999999997654444444 23455566 58999999998765433 3 666667777666543
No 232
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=30.61 E-value=70 Score=22.87 Aligned_cols=76 Identities=17% Similarity=0.233 Sum_probs=40.9
Q ss_pred HHHHHHhhccCCCCcccChhHHHHHhcC---ChH-----HHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc---CccHH
Q 024138 104 ALLQEFKTDYNQTHFVRNKEFKEAADKM---QGP-----LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVA 172 (272)
Q Consensus 104 Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~-----~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~---NP~la 172 (272)
.+++.+ |-|..-.+--+||...+..+ ++. ..+..+.-+-+.+-..=+|.|-..|+.+=++.- ...+.
T Consensus 62 ~lf~~~--D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~ 139 (176)
T 1nya_A 62 YLAKEA--GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAA 139 (176)
T ss_dssp HHHHHH--TSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHh--CCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHH
Confidence 444444 55555666667776554432 111 112333344445556668888888887766532 23455
Q ss_pred HHHhhhccc
Q 024138 173 EIFSLMSRD 181 (272)
Q Consensus 173 e~F~lMsRD 181 (272)
++|..+-.|
T Consensus 140 ~~~~~~D~d 148 (176)
T 1nya_A 140 EAFNQVDTN 148 (176)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHhCCC
Confidence 566555443
No 233
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=30.53 E-value=45 Score=23.89 Aligned_cols=86 Identities=15% Similarity=0.312 Sum_probs=46.9
Q ss_pred HHHHHHHHHhhccCCCCcccChhHHH----HHhcC----C-hHHHH------HHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 101 EFEALLQEFKTDYNQTHFVRNKEFKE----AADKM----Q-GPLRQ------IFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~----~~d~l----~-~~~R~------~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
++..+...+ |.|+.-.+--+||.. .+..+ + .+.++ .+++-+-+.+-..-+|.|-+.|...-+.
T Consensus 8 ~l~~~F~~~--D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~ 85 (176)
T 1nya_A 8 RLKKRFDRW--DFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE 85 (176)
T ss_dssp HHHHHHHHC--CSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHH--cCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 344444433 667777777777766 33322 1 12221 1222344455555678888887665443
Q ss_pred cc---C----------ccHHHHHhhhccchhhhhcchhh
Q 024138 166 KT---N----------PVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 166 ~~---N----------P~lae~F~lMsRDEARHAGFlNk 191 (272)
.. . ..+.++|..+-.| +-|+|+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d---~~G~I~~ 121 (176)
T 1nya_A 86 NLIFEQGEASFNRVLGPVVKGIVGMCDKN---ADGQINA 121 (176)
T ss_dssp HHHSSSCHHHHHHHHHHHHHHHHHHTCSS---CCSEEEH
T ss_pred HHhcCCchhhHHHHHHHHHHHHHHHhcCC---CCCCCCH
Confidence 21 2 2378888887666 5677664
No 234
>1hlm_A Hemoglobin (cyano Met); oxygen transport; HET: HEM; 2.90A {Caudina arenicola} SCOP: a.1.1.2
Probab=30.38 E-value=30 Score=26.49 Aligned_cols=20 Identities=20% Similarity=0.396 Sum_probs=15.6
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS 255 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~ 255 (272)
|-++.||+.+ ++|..|.+++
T Consensus 42 rlf~~~P~~~--------~~F~~~~d~~ 61 (159)
T 1hlm_A 42 RIFHNDPTAQ--------RKFPQMAGLS 61 (159)
T ss_dssp HHTTTCSTTT--------TSSTTTTTSC
T ss_pred HHHHHCHHHH--------HhcccccCCC
Confidence 4456999999 7888887764
No 235
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=30.35 E-value=49 Score=23.66 Aligned_cols=62 Identities=18% Similarity=0.155 Sum_probs=34.1
Q ss_pred HHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhh
Q 024138 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (272)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrl 164 (272)
++..+...| |.|..-++--+||...+..+-...-..=++-+.+.+-..=.|.|-|.|..+-+
T Consensus 80 ~l~~~F~~~--D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~ 141 (143)
T 2obh_A 80 EILKAFKLF--DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (143)
T ss_dssp HHHHHHHHH--CTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHHh--CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 344443333 77777888888998776654211111112222233344457888888876544
No 236
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=30.05 E-value=39 Score=25.18 Aligned_cols=58 Identities=24% Similarity=0.261 Sum_probs=47.5
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-.+-|+.....|-...-.|+++.+...+ ..|.++.++.-+..+|-.|+-++..-+..+
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l 141 (161)
T 1jgc_A 83 PRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNIFESLITDEEGHVDFLETQISLY 141 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667777787788889998877654 589999999999999999999999877655
No 237
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=29.95 E-value=56 Score=24.40 Aligned_cols=61 Identities=15% Similarity=0.194 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhhccCCCCcccChhHHHHHhcC------------ChHHHHHHHHHHHhhhhccchhhHHHHHHh
Q 024138 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------------QGPLRQIFVEFLERSCTAEFSGFLLYKELG 161 (272)
Q Consensus 99 ~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------------~~~~R~~FveFLerScTAEFSGfLLYKEl~ 161 (272)
++++..+.+.| |.|..-++--+||...+..+ +++.-+..++-+-+.+-..=.|.|-|.|..
T Consensus 67 ~~~l~~~F~~~--D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~ 139 (143)
T 3a4u_B 67 QELQLHYFKMH--DYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFA 139 (143)
T ss_dssp HHHHHHHHHHT--CTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred HHHHHHHHHHh--CCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHH
Confidence 45566666655 66666677667776655443 333322333333344444445555555554
No 238
>1sct_A Hemoglobin II (carbonmonoxy) (alpha chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=29.92 E-value=25 Score=26.92 Aligned_cols=35 Identities=14% Similarity=0.202 Sum_probs=23.6
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh----------hhhhhhhHHHhhhcc
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS----------QCISMTASVLLSMRA 270 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~----------~~~~~~~~~~~~~~~ 270 (272)
|-++.||+.+ ++|..|.+|+ |+.....++...+..
T Consensus 40 rlF~~~P~~k--------~~F~~~~d~~~~~~n~~~~~h~~~v~~al~~~v~~ 84 (150)
T 1sct_A 40 NLFTLRPDTK--------TYFTRLGDVQKGKANSKLRGHAITLTYALNNFVDS 84 (150)
T ss_dssp HHHHHCGGGG--------GGGCTTCCGGGGGGSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHChhHH--------HHHHHhCCCCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence 4568899988 7888888885 555555444444433
No 239
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=29.84 E-value=67 Score=24.92 Aligned_cols=63 Identities=16% Similarity=0.269 Sum_probs=45.7
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~ 167 (272)
.+..+|++.|++++- .|..-.+-=+||...+..+ .++++.|--| - .=+|+|-.+||..=++.-
T Consensus 42 ~~~~~~~~~l~~~~D--~d~~G~I~f~EF~~~~~~~-~~l~~aF~~f-----D-d~~G~I~~~El~~~l~~l 104 (174)
T 2i7a_A 42 MFSLDECRSLVALME--LKVNGRLDQEEFARLWKRL-VHYQHVFQKV-----Q-TSPGVLLSSDLWKAIENT 104 (174)
T ss_dssp CCCHHHHHHHHHHHC--SSCSSEECHHHHHHHHHHH-HHHHHHHHHH-----C-SBTTBEEGGGHHHHHHTC
T ss_pred CCCHHHHHHHHHHHC--CCCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----c-CCCCcCCHHHHHHHHHHh
Confidence 445678999999874 4555567778998887765 4677777655 4 568999999888776543
No 240
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=29.30 E-value=71 Score=24.02 Aligned_cols=18 Identities=22% Similarity=0.233 Sum_probs=10.3
Q ss_pred hccchhhHHHHHHhhhhh
Q 024138 148 TAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 148 TAEFSGfLLYKEl~rrlk 165 (272)
-..=+|++-..||.+=|+
T Consensus 95 D~d~~G~I~~~el~~~l~ 112 (153)
T 3i5g_B 95 DEDGQGFIPEDYLKDLLE 112 (153)
T ss_dssp CSSCSSCCCHHHHHHHHH
T ss_pred ccCCCCeEeHHHHHHHHH
Confidence 344466666666665554
No 241
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=28.89 E-value=56 Score=20.67 Aligned_cols=53 Identities=17% Similarity=0.159 Sum_probs=29.2
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrl 164 (272)
|.|..-++--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-+
T Consensus 17 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~ 69 (77)
T 2joj_A 17 DTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIM 69 (77)
T ss_dssp CCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 56666666666676655544322222334444445555556777777765544
No 242
>2dc3_A Cytoglobin; myoglobin, heme, oxygen transport, oxygen storage, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.68A {Homo sapiens} PDB: 1v5h_A* 3ag0_A* 1urv_A* 1umo_A* 1ury_A* 1ut0_A* 1ux9_A*
Probab=28.71 E-value=24 Score=28.66 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=25.3
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh-------------hhhhhhhHHHhhhccc
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS-------------QCISMTASVLLSMRAL 271 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~-------------~~~~~~~~~~~~~~~~ 271 (272)
|-++.||+.+ ++|..|++|+ |+.....++...+..|
T Consensus 51 rlF~~~P~~k--------~~F~~f~d~~~~~~l~~n~~~~~h~~~v~~al~~~v~~L 99 (193)
T 2dc3_A 51 RFFVNFPSAK--------QYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENL 99 (193)
T ss_dssp HHHHHCGGGG--------GGCTTTTTCCCHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCHHHH--------HHHHhccCCCcHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 4568899988 7899998884 6666665555544444
No 243
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=28.61 E-value=1.4e+02 Score=20.21 Aligned_cols=65 Identities=9% Similarity=0.135 Sum_probs=40.8
Q ss_pred cHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC---ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhh
Q 024138 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (272)
Q Consensus 98 ~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~~R~~FveFLerScTAEFSGfLLYKEl~rrl 164 (272)
..+++..+...| |-|+.-++--+||...+..+ ....-..-++-+.+.+-..=+|.|-|.|..+-+
T Consensus 40 ~~~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~ 107 (109)
T 3fs7_A 40 TPDQIKKVFGIL--DQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLV 107 (109)
T ss_dssp CHHHHHHHHHHH--STTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred cHHHHHHHHHHH--CCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 345555555555 66777778888888877766 222223334555555656667888888876554
No 244
>1ash_A Hemoglobin (OXY); oxygen storage; HET: HEM; 2.15A {Ascaris suum} SCOP: a.1.1.2
Probab=28.45 E-value=33 Score=27.68 Aligned_cols=40 Identities=15% Similarity=0.242 Sum_probs=28.5
Q ss_pred HHHhH-HhhCCCCCCCCCccccccchhhhhh------------hhhhhhhhHHHhhhcccC
Q 024138 225 TIYRH-LKANPDSSMTGRQSCGPDFSASRCM------------SQCISMTASVLLSMRALD 272 (272)
Q Consensus 225 tIyRH-Le~nPe~r~~~~~~~~PIF~~Fe~~------------~~~~~~~~~~~~~~~~~~ 272 (272)
.+|++ .+.|||.+ |.|+-++.+ .||+....++..-+..||
T Consensus 29 ~fy~~LF~~~Pe~r--------~~F~~~~~~~~~d~~~s~~f~~q~~rl~~aL~~~i~~lD 81 (150)
T 1ash_A 29 DLYKHMFENYPPLR--------KYFKSREEYTAEDVQNDPFFAKQGQKILLACHVLCATYD 81 (150)
T ss_dssp HHHHHHHHHCGGGG--------GGSTTTTTCCHHHHHHCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHChhHH--------HHhhhcccCChhhhhcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 45666 47899988 888888743 578887777766555544
No 245
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=27.89 E-value=45 Score=20.50 Aligned_cols=22 Identities=18% Similarity=0.149 Sum_probs=12.1
Q ss_pred HHhhhhccchhhHHHHHHhhhh
Q 024138 143 LERSCTAEFSGFLLYKELGRRL 164 (272)
Q Consensus 143 LerScTAEFSGfLLYKEl~rrl 164 (272)
+.+.+-..=+|.|-|.|...-+
T Consensus 41 ~~~~~D~~~~g~i~~~ef~~~~ 62 (66)
T 3li6_A 41 IFKSIDADGNGEIDQNEFAKFY 62 (66)
T ss_dssp HHHHHCTTCSSSCCHHHHHHHH
T ss_pred HHHHHCCCCCCCCCHHHHHHHH
Confidence 3344444556666666665544
No 246
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=27.80 E-value=41 Score=27.68 Aligned_cols=55 Identities=18% Similarity=0.120 Sum_probs=46.5
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASK 193 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal 193 (272)
-++.|......|+..--+|--+++..++. -|.++.+|.-.|.+|..||.-+=+-|
T Consensus 9 t~~~Ln~a~~~E~~A~~~Yl~~A~~a~~~G~~~iA~~f~~~A~eE~~HA~~~~~~l 64 (191)
T 1lko_A 9 TEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFL 64 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788889999999999999888888766 69999999999999999996544433
No 247
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=27.72 E-value=53 Score=25.83 Aligned_cols=108 Identities=16% Similarity=0.070 Sum_probs=72.7
Q ss_pred HHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhhhhcccc---cCce-------
Q 024138 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVMYVKYTF---FKPK------- 206 (272)
Q Consensus 138 ~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df~rkYTf---F~PK------- 206 (272)
..++-|-+-...|+...-.|--+++-.++. -|-+++.|.-.|-+|-.||--+=+-+.+.--.-++ =+|.
T Consensus 5 ~~~~~Ln~~i~~El~A~~~Yl~~a~~~~~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p~~~~~~~~ 84 (167)
T 1krq_A 5 EVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSLL 84 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCCCCSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCcCCHH
Confidence 467888899999999999999888877665 49999999999999999997665555444111111 0121
Q ss_pred eeeeehhcccccchhHHHHHHhHHhhCCCCCCCCCccccccchhh
Q 024138 207 FIFYATYLSEKIGYWRYITIYRHLKANPDSSMTGRQSCGPDFSAS 251 (272)
Q Consensus 207 fIfYATYLSEKIGYwRYItIyRHLe~nPe~r~~~~~~~~PIF~~F 251 (272)
=++=+..=-||.---.|-.++..-+.+-|+. ..-+|+||
T Consensus 85 e~l~~al~~E~~~~~~~~~l~~~a~~~~D~~------~~~~l~~~ 123 (167)
T 1krq_A 85 DVFEKTYEHEQFITKSINTLVEHMLTHKDYS------TFNFLQWY 123 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH------HHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChh------HHHHHHHH
Confidence 1222233346666667777777777766666 55555554
No 248
>1ccd_A Clara cell 17 KD protein; phospholipase A2 inhibitor; 3.00A {Rattus rattus} SCOP: a.101.1.1
Probab=27.24 E-value=46 Score=24.45 Aligned_cols=46 Identities=22% Similarity=0.398 Sum_probs=31.9
Q ss_pred cHHHHHHHHHHHhhccCCCCcccC--hhHHHHHhcCChHHHHHHHHHHHhhh
Q 024138 98 NQAEFEALLQEFKTDYNQTHFVRN--KEFKEAADKMQGPLRQIFVEFLERSC 147 (272)
Q Consensus 98 ~~~E~~Aml~Efr~DyNr~HFvR~--~eF~~~~d~l~~~~R~~FveFLerSc 147 (272)
..+|..+-|++|..|.. ..+ .++|+..|+|+.++|..+..+|++=-
T Consensus 19 s~~~Y~~~l~~y~~~~~----a~eA~~~lK~C~D~ls~e~r~~i~~~l~kI~ 66 (77)
T 1ccd_A 19 SESNYEAALKPFNPASD----LQNAGTQLKRLVDTLPQETRINIVKLTEKIL 66 (77)
T ss_dssp CHHHHHHHHTTTCCCHH----HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCHH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 34566666655443332 222 27899999999999999999998643
No 249
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=27.17 E-value=70 Score=28.42 Aligned_cols=63 Identities=13% Similarity=0.101 Sum_probs=40.7
Q ss_pred HHHhcCChHHHHHHHHHHHh-hhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhh
Q 024138 126 EAADKMQGPLRQIFVEFLER-SCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 126 ~~~d~l~~~~R~~FveFLer-ScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
++|.+|+++.|..+.-=|-- +.--...|-.+ -.|..-+ ++|.+.-.+...+=.|++|+=.-..
T Consensus 65 ~dw~~Lt~~Er~~~~~~l~~~~~~D~~v~~~l-~~l~~~~--~~~e~~~~~~~q~~~E~iHs~sYs~ 128 (346)
T 2rcc_A 65 KQFPTLTETEQEAFKKIIGLLAFLDSVQTDYS-MRAAEYL--TDSSLAALMSVLSFQEVVHNQSYSY 128 (346)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHHHTTTTCCCHH-HHHHTTB--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHC--CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57778888888766432221 11111223334 6667766 6799999999999999999754333
No 250
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=27.08 E-value=48 Score=22.60 Aligned_cols=65 Identities=17% Similarity=0.221 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhh
Q 024138 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (272)
Q Consensus 99 ~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk 165 (272)
.+++..+...| |.|..-++--+||...+..+....-..=++-|.+.+-..=+|.|-|.|..+-+.
T Consensus 23 ~~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~ 87 (105)
T 1wlz_A 23 YHAITQEFENF--DTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFS 87 (105)
T ss_dssp HHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC
T ss_pred HHHHHHHHHHH--CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHh
Confidence 44555555554 666666777777766655432211112233344444445567787877776664
No 251
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=27.08 E-value=53 Score=26.05 Aligned_cols=58 Identities=21% Similarity=0.250 Sum_probs=45.7
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhh-ccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLK-KTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk-~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-.+-|+.....|-...-.|+++.+--. ...|.++.++.-+..||-.|+-+|.+-+..+
T Consensus 104 ~~e~l~~~l~~E~~~~~~y~~~i~~A~~~~D~~t~~~L~~il~eEe~h~~~l~~~l~~i 162 (182)
T 3fvb_A 104 VKEVLEADLKGEYDARASYKESREICDKLGDYVSKQLFDELLADEEGHIDFLETQLDLL 162 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777778888665443 2689999999999999999999999977655
No 252
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=26.95 E-value=1.2e+02 Score=20.46 Aligned_cols=79 Identities=9% Similarity=0.118 Sum_probs=45.0
Q ss_pred ChHHHhhhhcccccccccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC---ChHHHHHHHHHHHhhhhccchhhHHH
Q 024138 81 DFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLY 157 (272)
Q Consensus 81 DFd~m~~lf~~eid~~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~~R~~FveFLerScTAEFSGfLLY 157 (272)
||++.-.++... ....+++..+...| |.|..-++--+||...+..+ ....-..-++-+.+.+-..=+|.|-|
T Consensus 26 ~~~eF~~~~~~~---~~~~~~l~~~F~~~--D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~ 100 (109)
T 1bu3_A 26 NYKAFFAKVGLT---AKSADDIKKAFFVI--DQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGV 100 (109)
T ss_dssp CHHHHHHHHTGG---GSCHHHHHHHHHHH--CTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECH
T ss_pred cHHHHHHHHHcC---hhhHHHHHHHHHHH--CCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeH
Confidence 455555553221 12345555555555 77777788888887776654 11122223444445555556788888
Q ss_pred HHHhhhh
Q 024138 158 KELGRRL 164 (272)
Q Consensus 158 KEl~rrl 164 (272)
.|..+-+
T Consensus 101 ~eF~~~~ 107 (109)
T 1bu3_A 101 DEWAALV 107 (109)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876644
No 253
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=26.74 E-value=73 Score=28.16 Aligned_cols=65 Identities=15% Similarity=0.042 Sum_probs=40.0
Q ss_pred HHHHhcCChHHHHHHHHHHHhhhhcc-chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhh
Q 024138 125 KEAADKMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 125 ~~~~d~l~~~~R~~FveFLerScTAE-FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
.++|.+|+++.|..+.--|--=..++ ..|-.+-.-+...+ .+|.....+...+-.|+.|+=.-..
T Consensus 42 ~~dw~~Lt~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~--~~pe~~~~~~~q~~~E~iHs~sYs~ 107 (319)
T 3n37_A 42 IPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDA--LTPHEEAVLSNISFMEAVHARSYSS 107 (319)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGC--SSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999887654332111111 01212222334445 5799999999999999999865443
No 254
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=26.68 E-value=71 Score=28.03 Aligned_cols=65 Identities=11% Similarity=-0.002 Sum_probs=39.0
Q ss_pred HHHHhcCChHHHHHHHHHHHhhhhcc-chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhh
Q 024138 125 KEAADKMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 125 ~~~~d~l~~~~R~~FveFLerScTAE-FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
.++|.+|+++.|..+.--|--=..++ ..|-.+-.-+...+ .+|.....+...+-.|+.|+=.-..
T Consensus 51 ~~dw~~Ls~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~--~~pe~~~~~~~q~~~E~iHs~sYs~ 116 (296)
T 3mjo_A 51 IQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDA--ETMHEEAVYTNIAFMESVHAKSYSN 116 (296)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGC--SSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788899888877654332111111 01112222334445 5799999999999999999865433
No 255
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=26.53 E-value=1.8e+02 Score=21.25 Aligned_cols=16 Identities=19% Similarity=0.478 Sum_probs=9.4
Q ss_pred HHHhhhccchhhhhcchhh
Q 024138 173 EIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 173 e~F~lMsRDEARHAGFlNk 191 (272)
++|..+-.| +-|+|+.
T Consensus 117 ~~F~~~D~d---~~G~I~~ 132 (195)
T 1qv0_A 117 AVFDIFDKD---GSGTITL 132 (195)
T ss_dssp HHHHHTC-------CEECH
T ss_pred HHHHHhcCC---CCCcCcH
Confidence 889888766 5677765
No 256
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=26.23 E-value=40 Score=25.44 Aligned_cols=58 Identities=22% Similarity=0.232 Sum_probs=46.3
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhh-ccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLK-KTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk-~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-.+-|+.....|-...-.|+++..--. ...|..+.+|.-+.+||-.|+-++.+-+..+
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~i 141 (161)
T 3gvy_A 83 LRETLDADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDLM 141 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777777778888765543 3589999999999999999999999977654
No 257
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=26.22 E-value=1.2e+02 Score=22.85 Aligned_cols=28 Identities=18% Similarity=0.278 Sum_probs=15.5
Q ss_pred hHHHhhhhcccccccccHHHHHHHHHHH
Q 024138 82 FDEMETLFNTEINKKLNQAEFEALLQEF 109 (272)
Q Consensus 82 Fd~m~~lf~~eid~~~~~~E~~Aml~Ef 109 (272)
.+.+-+.++.+-|-...-+||-+++...
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~ 90 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHF 90 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGG
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 4444444444444446667777776554
No 258
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=26.15 E-value=44 Score=22.31 Aligned_cols=20 Identities=30% Similarity=0.697 Sum_probs=14.1
Q ss_pred chhhHHH-HHHhhhhhccCcc
Q 024138 151 FSGFLLY-KELGRRLKKTNPV 170 (272)
Q Consensus 151 FSGfLLY-KEl~rrlk~~NP~ 170 (272)
-|+|+|| +|....++..||.
T Consensus 7 ~~af~lf~~~~r~~~~~~~p~ 27 (71)
T 4a3n_A 7 MNAFMVWAKDERKRLAQQNPD 27 (71)
T ss_dssp CCHHHHHHHHHHHHHHTTCTT
T ss_pred CCHHHHHHHHHHHHHHHHCCC
Confidence 3677777 4667778878886
No 259
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=25.77 E-value=58 Score=23.90 Aligned_cols=58 Identities=16% Similarity=0.098 Sum_probs=46.9
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhc-cCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~-~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-.|-|+.....|-..--.|+++.+...+ ..|..+.++.-...+|-.|+-++..-+..+
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i 141 (155)
T 2fkz_A 83 TKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASRELLEDILESEEDHIDWLETQLDLI 141 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666667777777889998887765 589999999999999999999998877654
No 260
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=24.81 E-value=99 Score=20.35 Aligned_cols=53 Identities=17% Similarity=0.257 Sum_probs=24.2
Q ss_pred ccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhh
Q 024138 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrl 164 (272)
|.|..-++--+||...+..+....-..=++-|.+.+-..=+|.|-|.|...-+
T Consensus 19 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~ 71 (92)
T 2kn2_A 19 DKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71 (92)
T ss_dssp CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHH
T ss_pred CCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 44555555555665555444221111122333333444445666666654433
No 261
>1sct_B Hemoglobin II (carbonmonoxy) (beta chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=24.75 E-value=17 Score=27.84 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=24.8
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh----------hhhhhhhHHHhhhccc
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS----------QCISMTASVLLSMRAL 271 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~----------~~~~~~~~~~~~~~~~ 271 (272)
|-++.||+.+ ++|..|.+|+ |+.....++...+..|
T Consensus 41 rlF~~~P~~k--------~~F~~f~~~~~~~~n~~~~~h~~~v~~al~~~v~~l 86 (151)
T 1sct_B 41 NLFKTSPSAK--------GKFARLGDVSAGKDNSKLRGHSITLMYALQNFVDAL 86 (151)
T ss_dssp HHHHHCHHHH--------HHTGGGCCGGGGGGCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCHHHH--------HHHHHhCCCCCccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 4568899988 7888888885 6666555554444443
No 262
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=24.60 E-value=70 Score=28.47 Aligned_cols=65 Identities=11% Similarity=-0.002 Sum_probs=39.4
Q ss_pred HHHHhcCChHHHHHHHHHHHhhhhcc-chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhh
Q 024138 125 KEAADKMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 125 ~~~~d~l~~~~R~~FveFLerScTAE-FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
.++|.+|+++.|..+.--|--=..++ ..|-.+-.-+...+ .+|.....+...+-.|+.|+=.-..
T Consensus 52 ~~dw~~Lt~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~--~~pE~~~~~~~q~~~E~iHs~sYs~ 117 (329)
T 3dhz_A 52 IQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDA--ETMHEEAVYTNIAFMESVHAKSYSN 117 (329)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHTGGGC--SSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999998887654332111111 01212222234444 5699999999999999999865433
No 263
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=24.31 E-value=67 Score=24.18 Aligned_cols=58 Identities=16% Similarity=0.179 Sum_probs=46.4
Q ss_pred HHHHHHhhhhccchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 139 FveFLerScTAEFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
-.+-|+.....|-...-.|+++.+...+..|.++.+|.-..+||-.|.-.+..-+..+
T Consensus 103 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l 160 (170)
T 2vzb_A 103 SVSLLNQNVSSERCAILRYQEIANFTNGKDYTTCDIAKHILAEEEEHEQDLQDYLTDI 160 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666677777889998888765589999999999999999999888876655
No 264
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=23.84 E-value=80 Score=28.08 Aligned_cols=64 Identities=20% Similarity=0.137 Sum_probs=38.5
Q ss_pred HHHh--cCChHHHHHHHHHHHhhhhcc-chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhh
Q 024138 126 EAAD--KMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 126 ~~~d--~l~~~~R~~FveFLerScTAE-FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
++|. +|+++.|..+.-=|--=..++ .-|-.+-..|..-+ ++|.+...+...+-.|++|+=.-..
T Consensus 63 ~dw~~~~Lt~~Er~~~~~~l~~~~~~D~iv~~~~~~~l~~~v--~~~E~~~~l~~q~~~EaiHs~sYs~ 129 (346)
T 1syy_A 63 ELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHV--TNPEARQYLLRQAFEEAVHTHTFLY 129 (346)
T ss_dssp HHHHSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677 889888877654332111111 11222222344445 5899999999999999999754433
No 265
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=23.79 E-value=32 Score=21.42 Aligned_cols=17 Identities=18% Similarity=0.282 Sum_probs=6.6
Q ss_pred ccCCCCcccChhHHHHH
Q 024138 112 DYNQTHFVRNKEFKEAA 128 (272)
Q Consensus 112 DyNr~HFvR~~eF~~~~ 128 (272)
|.|..-++--+||...+
T Consensus 16 D~d~~G~i~~~el~~~l 32 (71)
T 2b1u_A 16 DQDGDGHITVDELRRAM 32 (71)
T ss_dssp CCSSSSEEEHHHHHHHG
T ss_pred CCCCCCcCcHHHHHHHH
Confidence 33333333334444333
No 266
>2lhb_A Hemoglobin V (cyano Met); oxygen transport; HET: HEM; 2.00A {Petromyzon marinus} SCOP: a.1.1.2 PDB: 3lhb_A* 1f5o_A* 1f5p_A* 1uc3_A*
Probab=23.42 E-value=42 Score=25.61 Aligned_cols=20 Identities=10% Similarity=0.320 Sum_probs=15.7
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS 255 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~ 255 (272)
|=++.||+.+ ++|.-|.+++
T Consensus 40 rlF~~~P~~k--------~~F~~~~~~~ 59 (149)
T 2lhb_A 40 KFFTSTPAAQ--------EFFPKFKGLT 59 (149)
T ss_dssp HHHHHCGGGG--------GGCGGGTTCC
T ss_pred HHHHHCHhHH--------HHhhhhcCCC
Confidence 4568899988 7888887773
No 267
>1gcv_B Hemoglobin; oxygen storage/transport complex; HET: HEM; 2.00A {Mustelus griseus} SCOP: a.1.1.2 PDB: 1gcw_B*
Probab=23.24 E-value=36 Score=26.20 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=25.2
Q ss_pred HhHHhhCCCCCCCCCccccccchhhhhh---hhhhhhhhHHHhhhccc
Q 024138 227 YRHLKANPDSSMTGRQSCGPDFSASRCM---SQCISMTASVLLSMRAL 271 (272)
Q Consensus 227 yRHLe~nPe~r~~~~~~~~PIF~~Fe~~---~~~~~~~~~~~~~~~~~ 271 (272)
.|=++.||+.+ ++|+-|.++ .|......++......|
T Consensus 29 ~rlF~~~P~~k--------~~F~~f~d~~~~~h~~~v~~al~~~v~~l 68 (136)
T 1gcv_B 29 DRMFKVYPWTN--------RYFQKRTDFRSSIHAGIVVGALQDAVKHM 68 (136)
T ss_dssp HHHHHHSGGGG--------GGTTTCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHChHHH--------HHhhcccCCCccHHHHHHHHHHHHHHHhH
Confidence 35678999998 788888888 56665555555444443
No 268
>1yhu_C Hemoglobin B1A chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=23.15 E-value=44 Score=25.56 Aligned_cols=34 Identities=9% Similarity=0.175 Sum_probs=22.1
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh--------hhhhhhhHHHhhhc
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS--------QCISMTASVLLSMR 269 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~--------~~~~~~~~~~~~~~ 269 (272)
|=++.||+.+ ++|..|.+++ |+.....++...+.
T Consensus 39 rlF~~~P~~k--------~~F~~~~~~~~~~~~~~~h~~~v~~al~~~v~ 80 (148)
T 1yhu_C 39 ALFKMVPAAK--------NLFTRVNVADINSPEFQGHVVRVMGGLDILIN 80 (148)
T ss_dssp HHHHHCGGGG--------GGSGGGTGGGTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHChhHH--------HhccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4467899988 7888887764 55555444444333
No 269
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=22.86 E-value=51 Score=27.65 Aligned_cols=59 Identities=17% Similarity=0.153 Sum_probs=43.7
Q ss_pred HHHHhhhhcc-chhhHHHHHHhhhhhcc-CccHHHHHhhhccchhhhhcchhhhhhhhhhc
Q 024138 141 EFLERSCTAE-FSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGYECASKSVMYVK 199 (272)
Q Consensus 141 eFLerScTAE-FSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDEARHAGFlNkal~Df~rk 199 (272)
|=|+.+.-.| .----.|.++.+.-+.. +..++..|..++++|.+|+--+.+.|..+...
T Consensus 106 enL~~a~~gE~~E~t~my~~~a~~A~eEgd~~~a~~f~~i~~~E~~H~~~~~~ll~~l~~~ 166 (202)
T 1yuz_A 106 LNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAYNDIDAP 166 (202)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3344444555 44445677776666544 88999999999999999999999999888443
No 270
>2w72_B Human hemoglobin A; iron, heme, glycation, transport, acetylation, phosphoprotein, packing defects, disease mutation, distal site point mutation; HET: HEM SO4; 1.07A {Homo sapiens} PDB: 1j7w_B* 1qi8_B* 1j7y_B* 1dxu_B* 1a0u_B* 1a0z_B* 1gli_B* 1j7s_B* 1o1l_B* 1o1n_B* 1y0t_B* 1y0w_B* 1o1o_B* 1ye2_B* 1y35_B* 1y22_B* 1ye0_B* 1dxt_B* 1y5f_B* 1ird_B* ...
Probab=22.67 E-value=38 Score=25.82 Aligned_cols=20 Identities=25% Similarity=0.149 Sum_probs=16.0
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS 255 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~ 255 (272)
|=++.||+.+ ++|.-|.+++
T Consensus 30 rlF~~~P~~k--------~~F~~f~~~~ 49 (146)
T 2w72_B 30 RLLVVYPWTQ--------RFFESFGDLS 49 (146)
T ss_dssp HHHHHSGGGG--------GGCTTSCCCS
T ss_pred HHHHcChhHH--------HHhHhhcCCC
Confidence 4567899988 7888888874
No 271
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=22.63 E-value=1.9e+02 Score=22.21 Aligned_cols=47 Identities=11% Similarity=0.133 Sum_probs=32.0
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcCChHHHHHHHHHHHhhhhc
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTA 149 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~R~~FveFLerScTA 149 (272)
....+|.+.+++.++.. ...++-....+++++.|+.++++|.+=.-|
T Consensus 51 gl~~~e~~~l~~~~~~~-------~~~~~~~~~~~~~~e~r~~ll~~L~~IA~A 97 (133)
T 2h5n_A 51 GILQDQVDLLLKASDSI-------EASQAVALIARMDEERKKYVASYLGVIMAS 97 (133)
T ss_dssp TCCHHHHHHHHHHHTTS-------CHHHHHHHHHTSCHHHHHHHHHHHHHHSCB
T ss_pred CcCHHHHHHHHHHHHhc-------cHHHHHHHHHcCCHHHHHHHHHHHHHHhhc
Confidence 33446788888877511 123344456778999999999999986555
No 272
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=22.57 E-value=65 Score=23.14 Aligned_cols=45 Identities=13% Similarity=0.077 Sum_probs=27.0
Q ss_pred HhhhhccchhhHHHHHHhhhhhcc--------------CccHHHHHhhhccchhhhhcchhh
Q 024138 144 ERSCTAEFSGFLLYKELGRRLKKT--------------NPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 144 erScTAEFSGfLLYKEl~rrlk~~--------------NP~lae~F~lMsRDEARHAGFlNk 191 (272)
-+.+-..-+|.|-+.|+..-+... ...+.++|..+-.| +-|.|+.
T Consensus 66 f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d---~dG~Is~ 124 (185)
T 2sas_A 66 KGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVS---GDGIVDL 124 (185)
T ss_dssp HHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTT---SSSCCCH
T ss_pred HHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCC---CCCeEcH
Confidence 344444456666666654433221 15678889888776 5688776
No 273
>1xq5_A Hemoglobin alpha-1 chain; FISH hemoglobin, rapid oxidation, structural genomics, protein structure initiative, PSI, CESG; HET: HEM; 1.90A {Perca flavescens} SCOP: a.1.1.2 PDB: 3bj1_A* 3bj2_A* 3bj3_A* 3bcq_A*
Probab=22.56 E-value=37 Score=25.89 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=23.9
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh--------hhhhhhhHHHhhhccc
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS--------QCISMTASVLLSMRAL 271 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~--------~~~~~~~~~~~~~~~~ 271 (272)
|=++.||+.+ ++|.-|.+++ |......++......|
T Consensus 32 rlF~~~P~~k--------~~F~~~~d~~~~n~~~~~h~~~v~~al~~~v~~l 75 (143)
T 1xq5_A 32 RMLAVYPQTK--------TYFSHWKDLSPGSAPVNKHGKTIMGGIVDAVASI 75 (143)
T ss_dssp HHHHHCGGGG--------GGGTTCSCCSTTSHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHChHHH--------HHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhH
Confidence 4568899988 7888888884 6655555554444333
No 274
>1utr_A Uteroglobin; clara cell 17 kDa protein (CC10), phospholipase A2 inhibitor, clara cell phospholipid-binding protein, progesterone binding; HET: PCB; NMR {Rattus norvegicus} SCOP: a.101.1.1
Probab=22.44 E-value=63 Score=24.40 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=23.8
Q ss_pred hhHHHHHhcCChHHHHHHHHHHHhhhhc
Q 024138 122 KEFKEAADKMQGPLRQIFVEFLERSCTA 149 (272)
Q Consensus 122 ~eF~~~~d~l~~~~R~~FveFLerScTA 149 (272)
.++|+..|+|+++.|..+..+|+.=..|
T Consensus 60 ~~lK~Cvd~ls~e~r~~i~~ll~~I~~S 87 (96)
T 1utr_A 60 TQLKRLVDTLPQETRINIVKLTEKILTS 87 (96)
T ss_dssp HHHHHHHTTSCSHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999864443
No 275
>1yqf_A Hypothetical protein LMAJ011689; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.30A {Leishmania major} SCOP: d.25.1.1
Probab=22.33 E-value=43 Score=28.04 Aligned_cols=28 Identities=18% Similarity=0.395 Sum_probs=22.9
Q ss_pred HhcCChHHHHHHHHHHH-hhhhccchhhH
Q 024138 128 ADKMQGPLRQIFVEFLE-RSCTAEFSGFL 155 (272)
Q Consensus 128 ~d~l~~~~R~~FveFLe-rScTAEFSGfL 155 (272)
.+.||++++..|.+||+ |-.+.||.-||
T Consensus 151 F~~LDe~Lq~~l~~YLeeRGI~~~la~fl 179 (203)
T 1yqf_A 151 VHELDYDLLNCVMTYLEKRGVDEKLGEFV 179 (203)
T ss_dssp GGGSBHHHHHHHHHHHHHTTCSHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 36899999999999997 55777777665
No 276
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=22.31 E-value=84 Score=22.02 Aligned_cols=39 Identities=18% Similarity=0.120 Sum_probs=21.7
Q ss_pred hccchhhHHHHHHhhhhhcc-----CccHHHHHhhhccchhhhhcchh
Q 024138 148 TAEFSGFLLYKELGRRLKKT-----NPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 148 TAEFSGfLLYKEl~rrlk~~-----NP~lae~F~lMsRDEARHAGFlN 190 (272)
-..=+|+|-..|+.+=++.- ...+.++|..+- .+-|-|+
T Consensus 97 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d----~~dg~i~ 140 (151)
T 1w7j_B 97 DKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE----DSNGCIN 140 (151)
T ss_dssp CTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC----CTTSEEE
T ss_pred CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc----CCCCeEe
Confidence 34456777777776665432 234566666553 3455554
No 277
>4a64_A Cullin-4B, CUL4B, CUL-4B; cell cycle; 2.57A {Homo sapiens}
Probab=21.87 E-value=1.2e+02 Score=26.67 Aligned_cols=60 Identities=17% Similarity=0.203 Sum_probs=49.1
Q ss_pred hHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhcc-CccHHHHHhhhccch
Q 024138 123 EFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDE 182 (272)
Q Consensus 123 eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~-NP~lae~F~lMsRDE 182 (272)
|-+.+..-|++.+++..++=+++-...+....||-.++..=|.+. ..+|+.+|+|++|-.
T Consensus 221 E~~R~~~yL~~~T~~~l~~~~e~~LI~~h~~~ll~~~~~~lL~~~~~~dL~~mY~L~~rv~ 281 (354)
T 4a64_A 221 EADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVR 281 (354)
T ss_dssp HHHHHHHTSCGGGHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTST
T ss_pred HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHcccc
Confidence 445555668889999999999999999999988877777766544 578999999999975
No 278
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=21.73 E-value=1.2e+02 Score=26.70 Aligned_cols=76 Identities=18% Similarity=0.289 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhhccCCCCcccChhHHHHHhcC-----ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc---cCcc
Q 024138 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---TNPV 170 (272)
Q Consensus 99 ~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-----~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~---~NP~ 170 (272)
.++++.+++++ |.|..-.+--+||...+... ..++++.|-. .-..=+|+|-..|+.+=++. ...+
T Consensus 389 ~~~~~~~~~~~--D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~-----~D~d~~G~Is~~El~~~l~~~~~~~~~ 461 (494)
T 3lij_A 389 ESEVDAILGAA--DFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQK-----FDQDGNGKISVDELASVFGLDHLESKT 461 (494)
T ss_dssp HHHHHHHHHHH--CTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHH-----HCTTCSSEECHHHHHHHC-CCSCCCHH
T ss_pred HHHHHHHHHHh--CCCCCCcCcHHHHHHHHHhhhccccHHHHHHHHHH-----HCCCCCCcCCHHHHHHHHHhcCCCHHH
Confidence 44555555544 44555556666776554332 2233444433 34455788888887776643 1234
Q ss_pred HHHHHhhhccc
Q 024138 171 VAEIFSLMSRD 181 (272)
Q Consensus 171 lae~F~lMsRD 181 (272)
+.++|..+-.|
T Consensus 462 ~~~~~~~~D~d 472 (494)
T 3lij_A 462 WKEMISGIDSN 472 (494)
T ss_dssp HHHHHHTTCSS
T ss_pred HHHHHHHhCCC
Confidence 55555554433
No 279
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=21.71 E-value=53 Score=27.10 Aligned_cols=45 Identities=20% Similarity=0.330 Sum_probs=26.0
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccChhHHHHHhcC------ChHHHHHHHHHHHhh
Q 024138 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERS 146 (272)
Q Consensus 97 ~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~R~~FveFLerS 146 (272)
...++++++.+.++.=|.+. ..++++++.| +.+..+.|++||..|
T Consensus 209 ~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 259 (265)
T 4e6u_A 209 WSKNTIQGLREAYKLIFKSG-----LTSVQAIDQIKSEILPSVPEAQLLIDSLEQS 259 (265)
T ss_dssp CCHHHHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHTTTTCGGGHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHhcC-----CCHHHHHHHHHhhhcCCCHHHHHHHHHHhhc
Confidence 44567777777777665443 3343333222 124567889999765
No 280
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=21.60 E-value=87 Score=27.27 Aligned_cols=62 Identities=8% Similarity=0.080 Sum_probs=35.3
Q ss_pred HHHhcCChHHHHHHHHHHHhhhh-cc-chhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchh
Q 024138 126 EAADKMQGPLRQIFVEFLERSCT-AE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYEC 190 (272)
Q Consensus 126 ~~~d~l~~~~R~~FveFLerScT-AE-FSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlN 190 (272)
++|.+|+++.|. |+..+-.--| ++ ..|--+...+..-+ ++|++.-.++..+=.|+.|+=.-.
T Consensus 50 ~dw~~L~~~Er~-~~~~~l~~~~~~D~iv~~~l~~~~~~~v--~~pE~~~~~~~q~~~E~iHs~sYs 113 (286)
T 3olj_A 50 QHWESLKPEERY-FISHVLAFFAASDGIVNENLVERFSQEV--QITEARCFYGFQIAMENIHSEMYS 113 (286)
T ss_dssp HHHHHSCHHHHH-HHHHHHHHHHHHHHHHHHHHHHTHHHHC--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778887777 3333321111 00 01112222333334 689999889999999999986533
No 281
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=20.98 E-value=94 Score=27.50 Aligned_cols=64 Identities=9% Similarity=0.037 Sum_probs=37.2
Q ss_pred HHHhcCChHHHHHHHHHHHhhhhc-cchhhHHHHHHhhhhhccCccHHHHHhhhccchhhhhcchhh
Q 024138 126 EAADKMQGPLRQIFVEFLERSCTA-EFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGYECA 191 (272)
Q Consensus 126 ~~~d~l~~~~R~~FveFLerScTA-EFSGfLLYKEl~rrlk~~NP~lae~F~lMsRDEARHAGFlNk 191 (272)
++|.+|+++.|..+.-=|--=..+ ...|-.+--.+.+-+ ++|.+.-+++..+=+|++|+=.-..
T Consensus 74 ~dw~~Lt~~Er~~~~~~l~~~~~~D~iv~~~l~~~l~~~v--~~~E~~~~~~~q~~~E~iHs~sYs~ 138 (311)
T 2o1z_A 74 KDFEKLNDNEKHFIKHVLAFFAASDGIVLENLASKFLRQV--KITEAKKFYAFQIAVENIHSETYSL 138 (311)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHC-------CHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788888877664432211111 112222333455555 6799998899999999999754433
No 282
>2c0k_A Hemoglobin; oxygen transport, heme, iron, metal-binding; HET: HEM; 2.6A {Gasterophilus intestinalis}
Probab=20.82 E-value=45 Score=25.59 Aligned_cols=20 Identities=20% Similarity=0.265 Sum_probs=16.0
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS 255 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~ 255 (272)
|=++.||+.+ ++|.-|.+++
T Consensus 30 rlF~~~P~~k--------~~F~~f~~~~ 49 (151)
T 2c0k_A 30 RYFKKYPHNL--------NHFPWFKEIP 49 (151)
T ss_dssp HHHHHCGGGG--------GGCHHHHTSC
T ss_pred HHHHHCHHHH--------HHHHHhCCCC
Confidence 5578899988 7888887775
No 283
>2o8x_A Probable RNA polymerase sigma-C factor; promoter recognition, transcription regulation, helix-turn-H motif, transcription; 3.00A {Mycobacterium tuberculosis}
Probab=20.79 E-value=67 Score=20.61 Aligned_cols=36 Identities=14% Similarity=0.090 Sum_probs=26.4
Q ss_pred hHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc
Q 024138 123 EFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (272)
Q Consensus 123 eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~ 166 (272)
...++++.||+..|++|.-.... | +-++||+..+.-
T Consensus 8 ~l~~~l~~L~~~~r~il~l~~~~-------g-~s~~eIA~~lgi 43 (70)
T 2o8x_A 8 EVTTMIADLTTDQREALLLTQLL-------G-LSYADAAAVCGC 43 (70)
T ss_dssp HHHTTTTSSCHHHHHHHHHHHTS-------C-CCHHHHHHHHTS
T ss_pred HHHHHHHhCCHHHHHHHHHHHHc-------C-CCHHHHHHHHCc
Confidence 35667889999999999874322 3 458899888853
No 284
>1hlb_A Hemoglobin (deoxy); oxygen transport; HET: HEM; 2.50A {Caudina arenicola} SCOP: a.1.1.2
Probab=20.64 E-value=31 Score=26.40 Aligned_cols=20 Identities=25% Similarity=0.381 Sum_probs=15.7
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhhh
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCMS 255 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~~ 255 (272)
|-++.||+.+ ++|..|++++
T Consensus 42 rlF~~~P~~k--------~~F~~~~~~~ 61 (158)
T 1hlb_A 42 RIFAYDPSAQ--------NKFPQMAGMS 61 (158)
T ss_dssp HHHHHCTHHH--------HTSGGGTTCC
T ss_pred HHHHHCHHHH--------HHhhhhcCCC
Confidence 4568899988 7888887764
No 285
>1lhs_A Myoglobin; oxygen storage; HET: HEM; 2.00A {Caretta caretta} SCOP: a.1.1.2 PDB: 1lht_A*
Probab=20.54 E-value=29 Score=26.83 Aligned_cols=19 Identities=16% Similarity=0.459 Sum_probs=15.7
Q ss_pred hHHhhCCCCCCCCCccccccchhhhhh
Q 024138 228 RHLKANPDSSMTGRQSCGPDFSASRCM 254 (272)
Q Consensus 228 RHLe~nPe~r~~~~~~~~PIF~~Fe~~ 254 (272)
|=++.||+.+ ++|..|.++
T Consensus 31 rlF~~~P~~k--------~~F~~f~~~ 49 (153)
T 1lhs_A 31 RLFQLHPETQ--------ERFAKFKNL 49 (153)
T ss_dssp HHHHHCHHHH--------TTCGGGTTC
T ss_pred HHHHHChhHH--------HHhHhhcCC
Confidence 4578899988 788888888
No 286
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=20.51 E-value=1.2e+02 Score=22.77 Aligned_cols=65 Identities=11% Similarity=0.144 Sum_probs=53.6
Q ss_pred ChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhccC-ccHHHHHhhhccchhhhhcchhhhhhhh
Q 024138 132 QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGYECASKSVM 196 (272)
Q Consensus 132 ~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~~N-P~lae~F~lMsRDEARHAGFlNkal~Df 196 (272)
..+.++.-++-|-.-...|++..+.|+-..-.++..+ ..+++.|.-.+-+|..||-=|-.-+.++
T Consensus 2 ~~~~~~~v~~~LN~~la~e~~~~~~~~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~laeri~~l 67 (149)
T 1n1q_A 2 KTSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSI 67 (149)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHhccchheeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3467788899999999999999999999988886554 5689999999999999997766655444
No 287
>3hug_A RNA polymerase sigma factor; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=20.33 E-value=1e+02 Score=21.51 Aligned_cols=36 Identities=14% Similarity=0.164 Sum_probs=26.8
Q ss_pred hHHHHHhcCChHHHHHHHHHHHhhhhccchhhHHHHHHhhhhhc
Q 024138 123 EFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (272)
Q Consensus 123 eF~~~~d~l~~~~R~~FveFLerScTAEFSGfLLYKEl~rrlk~ 166 (272)
....+++.||+..|++|+-.... | +-|+||+..+.-
T Consensus 30 ~l~~~l~~L~~~~r~vl~l~~~~-------g-~s~~eIA~~lgi 65 (92)
T 3hug_A 30 LIADALAQLSAEHRAVIQRSYYR-------G-WSTAQIATDLGI 65 (92)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHTS-------C-CCHHHHHHHHTS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHc-------C-CCHHHHHHHHCc
Confidence 46678899999999999874322 2 358899988853
No 288
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=20.16 E-value=49 Score=22.96 Aligned_cols=29 Identities=17% Similarity=0.182 Sum_probs=14.0
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccChhHHH
Q 024138 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKE 126 (272)
Q Consensus 96 ~~~~~E~~Aml~Efr~DyNr~HFvR~~eF~~ 126 (272)
....++++.|++++ |-|..-.+-=+||..
T Consensus 48 ~~~~~~v~~~~~~~--D~d~dG~I~f~EF~~ 76 (92)
T 3rm1_A 48 IKEQEVVDKVMETL--DSNGDGECDFQEFMA 76 (92)
T ss_dssp CCSHHHHHHHHHHH--CTTSSSSBCHHHHHH
T ss_pred cccHHHHHHHHHHH--cCCCCCCCcHHHHHH
Confidence 34455666666665 334433444444433
Done!