Your job contains 1 sequence.
>024139
MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIAS
STPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGGA
GDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAA
RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGF
PATLTTGNYPPIIGKEYQQPAVRNGALHYGDA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024139
(272 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 345 2.0e-31 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 343 3.3e-31 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 334 3.0e-30 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 331 6.2e-30 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 256 5.5e-22 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 237 8.7e-20 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 223 1.9e-19 2
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 228 5.1e-19 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 229 9.8e-19 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 191 4.2e-15 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 195 7.2e-15 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 164 3.1e-12 1
TAIR|locus:2179122 - symbol:APTX "APRATAXIN-like" species... 139 5.1e-07 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 123 4.5e-06 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 120 1.7e-05 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 119 3.2e-05 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 117 7.9e-05 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 112 0.00024 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 112 0.00024 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 112 0.00025 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 112 0.00025 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 111 0.00033 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 111 0.00042 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 109 0.00059 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 109 0.00059 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 106 0.00082 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 106 0.00095 2
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 77/136 (56%), Positives = 91/136 (66%)
Query: 125 SSTGVPL-SQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAAXXX 183
S +G P S +S AMRE IF +AA+QP+ IDP++V+PPKRRNV+ISKDPQSVAA
Sbjct: 100 SDSGAPQGSSSSSSSEAMREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLR 159
Query: 184 XXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA------NRPAG 237
VPGGTKMDTASMLDEAIHYVKFLK+QVQSLERAAA +R A
Sbjct: 160 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAAAATGAAAHRAAA 219
Query: 238 IG--FPATLTTGNYPP 251
G +PA L ++ P
Sbjct: 220 FGAAYPAALPMQHHAP 235
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 77/132 (58%), Positives = 84/132 (63%)
Query: 108 SYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRR 167
S SPN Y N+S + +MAAMRE IFR+A MQPIHIDP++VKPPKRR
Sbjct: 68 SISPNTAYSSVFLDKRNNSNN---NNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRR 124
Query: 168 NVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
NV+ISKDPQSVAA VPGGTKMDTASMLDEAIHYVKFLK QVQSL
Sbjct: 125 NVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184
Query: 228 ERAAANRPAGIG 239
E A G G
Sbjct: 185 EEQAVVTGGGGG 196
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 69/102 (67%), Positives = 75/102 (73%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXX 196
+MAAMRE IFR+A MQPIHIDP+SVKPPKR+NV+ISKDPQSVAA
Sbjct: 91 NMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQR 150
Query: 197 XVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
VPGGTKMDTASMLDEAIHYVKFLK QVQSLE A G+
Sbjct: 151 LVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGM 192
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 73/121 (60%), Positives = 84/121 (69%)
Query: 139 AAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXV 198
AAMRE IF +AA+QP++IDP++V+PPKRRNV+IS DPQSVAA V
Sbjct: 125 AAMREMIFHIAALQPVNIDPETVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLV 184
Query: 199 PGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA---NRPAG-IGFPATLTTGNYPPIIG 254
PGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA +RP A T YP + G
Sbjct: 185 PGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAANGHRPPPPTATSAAAATVAYPGLNG 244
Query: 255 K 255
+
Sbjct: 245 Q 245
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 53/98 (54%), Positives = 64/98 (65%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXX 197
+ AM+E ++++AAMQ + IDP +VK PKRRNV+IS DPQSVAA
Sbjct: 92 LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
VPGGTKMDTASMLDEAI YVKFLK Q++ L P
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTP 189
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 237 (88.5 bits), Expect = 8.7e-20, P = 8.7e-20
Identities = 54/125 (43%), Positives = 73/125 (58%)
Query: 108 SYSPNERYWRGGAGDSNSSTGVPLSQK----QNSMAAMRETIFRVAAMQPIHIDPDSVKP 163
S P RGG+ + + LS ++A M+E I+R AA +P++ + V+
Sbjct: 208 SKKPRTEKERGGSSNISFQHSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEK 267
Query: 164 PKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQ 223
PKR+NVKIS DPQ+VAA VPGGTKMDTASMLDEA +Y+KFL+ Q
Sbjct: 268 PKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQ 327
Query: 224 VQSLE 228
V++LE
Sbjct: 328 VKALE 332
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 223 (83.6 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 58/154 (37%), Positives = 82/154 (53%)
Query: 117 RGGAGDSNSSTGV-PLSQKQN-SMAAMRETIFRVAAMQPIHIDP-DSVKPPKRRNVKISK 173
RG G+ G PL + ++A ++E I+R AAM+P+ + D+ + P+RRNV+IS
Sbjct: 313 RGPGGNCGGGGGDDPLYEPDTEALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISS 372
Query: 174 DPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE----R 229
DPQ+VAA VPGG KMDTASMLDEA +Y++FLK+Q++ L+ R
Sbjct: 373 DPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRR 432
Query: 230 AAANRPAGIGFPA--TLTTGNYPPIIGKEYQQPA 261
N I A T+ T + P PA
Sbjct: 433 NYPNAAMSINTAAATTMATSSSPTYNNSNAAMPA 466
Score = 37 (18.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 112 NERYWRGGAGDSNSSTG 128
+E W GG G + G
Sbjct: 29 SESVWNGGGGGGDGDGG 45
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 48/91 (52%), Positives = 57/91 (62%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXX 197
M AM+E + +A MQP+ IDP +V P RRNV+IS DPQ+V A
Sbjct: 85 MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRI 144
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 145 VPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 229 (85.7 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKP-PKRRNVKISKDPQSVAAXXXXXXXXXXXXXXX 195
+MA ++E I+R AAM+P+H+ ++ P+R+NV+IS DPQ+VAA
Sbjct: 246 AMAQVKEMIYRAAAMRPVHLGTEAAADKPRRKNVRISSDPQTVAARLRRERVSDRLRVLQ 305
Query: 196 XXVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGG KMDTASMLDEA Y+KFLK+QVQ LE
Sbjct: 306 KLVPGGNKMDTASMLDEAASYLKFLKSQVQKLE 338
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 43/98 (43%), Positives = 55/98 (56%)
Query: 135 QNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAAXXXXXXXXXXXXXX 194
Q+S + T R + + + P+RRN ++S +PQSVAA
Sbjct: 84 QSSSRGIMYTTTRQGVIDAAEEEEAAAPRPRRRNARVSSEPQSVAARLRRERVSQRMRAL 143
Query: 195 XXXVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
VPGG ++DTASML+EAI YVKFLK VQSLERAAA
Sbjct: 144 QRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLERAAA 181
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 195 (73.7 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 48/124 (38%), Positives = 72/124 (58%)
Query: 119 GAGDSNSSTGVPLSQKQNS--MAAMRETIFRVAAMQPIHI-------DPDSVKPP----- 164
GAG + + G + ++ +A ++E ++R A M+P+ + DP S PP
Sbjct: 237 GAGAAAALLGYGRGYEPDTEAIAQVKEMVYRAAPMRPVTLGGPASASDPSSRPPPPPQRP 296
Query: 165 KRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+R+NV+IS DPQ+VAA VPGG+KMDTA+MLDEA Y+KFLK+Q+
Sbjct: 297 RRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQL 356
Query: 225 QSLE 228
++LE
Sbjct: 357 EALE 360
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/67 (53%), Positives = 43/67 (64%)
Query: 165 KRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+R K+S DPQSVAA VPGG+KMDT SML++AIHYVKFLKTQ+
Sbjct: 46 RRPGAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQI 105
Query: 225 QSLERAA 231
SL +AA
Sbjct: 106 -SLHQAA 111
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 139 (54.0 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 31/59 (52%), Positives = 33/59 (55%)
Query: 166 RRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQV 224
R +S DPQSVAA VPGG KMDT SMLDEAI YVKFLK Q+
Sbjct: 38 RSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQI 96
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 123 (48.4 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 160 SVKPPKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKF 219
S+K + N I+ DPQS+ A VP GTK+D ++ML++A+HYVKF
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKF 186
Query: 220 LKTQVQSL 227
L+ Q++ L
Sbjct: 187 LQLQIKLL 194
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 120 (47.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 160 SVKPPKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKF 219
SVK R + DPQS+ A VP GTK+D ++ML+EA+HYVKF
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 221
Query: 220 LKTQVQSL 227
L+ Q++ L
Sbjct: 222 LQLQIKLL 229
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 37/128 (28%), Positives = 56/128 (43%)
Query: 104 PTYFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKP 163
PT + SP+ + GG+GDS G+ + +A R A P + +
Sbjct: 132 PTAATSSPSSCFSSGGSGDS----GMVMVTTTTPRSAAASGSQRRARPPPSPLQGSELHE 187
Query: 164 PKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQ 223
++ +K+ QS AA VP G K+D +MLD AI YVKF++ Q
Sbjct: 188 YSKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQ 247
Query: 224 VQSLERAA 231
++ LE A
Sbjct: 248 LRVLETDA 255
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 117 (46.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 42/139 (30%), Positives = 58/139 (41%)
Query: 111 PNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVK 170
PN + +G G + G +Q Q +A T VAA P P S + R +
Sbjct: 91 PNFQIPQGSGGGLMNQQGQTQTQTQPQASASTATGGTVAA--P----PQSRTKIRARRGQ 144
Query: 171 ISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
+ DP S+A VP G K D ASMLDE I YVKFL+ QV+ L +
Sbjct: 145 AT-DPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMS 203
Query: 231 AANRPAGIGFPATLTTGNY 249
A + + G++
Sbjct: 204 RLGGAASVSSQISEAGGSH 222
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 112 (44.5 bits), Expect = 0.00024, P = 0.00024
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 172 SKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+KDPQS+AA VP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 204 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 259
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 112 (44.5 bits), Expect = 0.00024, P = 0.00024
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 173 KDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
KDPQS+AA VP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 203 KDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVL 257
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 174 DPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ A VP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 225 DPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 278
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 31/75 (41%), Positives = 38/75 (50%)
Query: 160 SVKPPKRRNVKIS-------KDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDE 212
S KP N KI KDPQS+AA VP GTK+D +ML++
Sbjct: 189 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 248
Query: 213 AIHYVKFLKTQVQSL 227
AI YVKFL+ QV+ L
Sbjct: 249 AIGYVKFLQVQVKVL 263
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 111 (44.1 bits), Expect = 0.00033, P = 0.00033
Identities = 40/129 (31%), Positives = 50/129 (38%)
Query: 99 QGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDP 158
Q T IP ++ PN+ + G S S L Q + A P
Sbjct: 69 QITMIPLSHNH-PNDALFNGF---STGSLPFHLPQGSGGQTQTQSQATASATTGGATAQP 124
Query: 159 DSVKPPKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVK 218
+ KP R + DP S+A VP G K D ASMLDE I YVK
Sbjct: 125 QT-KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVK 183
Query: 219 FLKTQVQSL 227
FL+ QV+ L
Sbjct: 184 FLQLQVKVL 192
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 174 DPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ A VP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 109 (43.4 bits), Expect = 0.00059, P = 0.00059
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 174 DPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ A VP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 230 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLL 283
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 109 (43.4 bits), Expect = 0.00059, P = 0.00059
Identities = 30/89 (33%), Positives = 41/89 (46%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYV 217
P S++P R + DP S+A VP K D A+M+DE + YV
Sbjct: 139 PTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYV 198
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLTT 246
KFL+ QV+ L + +R G G A L T
Sbjct: 199 KFLRLQVKVL---SMSRLGGAGAVAPLVT 224
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 106 (42.4 bits), Expect = 0.00082, P = 0.00082
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 166 RRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R + + SKD QS+ A VP GTK+D ++ML+EA+ YVKFL+ Q++
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 215
Query: 226 SL 227
L
Sbjct: 216 LL 217
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 106 (42.4 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 163 PPKRRNVKISKDPQSVAAXXXXXXXXXXXXXXXXXVPGGTKMDTASMLDEAIHYVKFLKT 222
P +RR+ I+ QS+ A VP GTK+D ++ML+EA+HYVKFL+
Sbjct: 211 PARRRSATIA---QSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQL 267
Query: 223 QVQ 225
Q++
Sbjct: 268 QIK 270
Score = 35 (17.4 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 118 GGAGDSNSSTG 128
GG+G +S TG
Sbjct: 97 GGSGSGSSGTG 107
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 272 206 0.00097 111 3 11 23 0.39 33
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 588 (63 KB)
Total size of DFA: 158 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.61u 0.11s 15.72t Elapsed: 00:00:01
Total cpu time: 15.62u 0.11s 15.73t Elapsed: 00:00:01
Start: Tue May 21 01:28:50 2013 End: Tue May 21 01:28:51 2013