BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024139
(272 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 164/275 (59%), Positives = 191/275 (69%), Gaps = 30/275 (10%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIAS 60
M+ D LKSA + MM+ QMDK PEF G T N++AEL ++ + ++
Sbjct: 1 MDIDLLKSAPEDQMEMMMM---QMDKLPEFCG--TYNEMAEL-------PSMGFSGGGSA 48
Query: 61 STPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGG- 119
+ P DN PH V+SP+F N S S S NGT T Q + P + + S R WRG
Sbjct: 49 TMPQIFDN--PH-VASPTFIN--SPSTISFNGT--TPPQEPTAPAFLTNSAVAR-WRGTG 100
Query: 120 --AGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQS 177
+G N ST +QK+NSMAAMRE IFR+AAMQP+HIDP+SVKPPKRRNVKISKDPQS
Sbjct: 101 ELSGVCNLSTP---AQKRNSMAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKISKDPQS 157
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 237
VAARHRRERISE+IRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG
Sbjct: 158 VAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 217
Query: 238 IGFPATLTTGNYPPIIGKEYQQPAVRNGALHYGDA 272
IGFP T++ G+Y PI K+YQ HY DA
Sbjct: 218 IGFPVTMSNGSYLPIT-KQYQP---SQNLHHYPDA 248
>gi|255538274|ref|XP_002510202.1| transcription factor, putative [Ricinus communis]
gi|223550903|gb|EEF52389.1| transcription factor, putative [Ricinus communis]
Length = 274
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 167/285 (58%), Positives = 196/285 (68%), Gaps = 24/285 (8%)
Query: 1 MEFDRLKSA-ATEDQMEMMVMMMQMDKFPEFYGACTNNDVA-ELLPADHTSATITTNSNI 58
ME D+L S+ ATEDQMEM++MM DK P+F+GA NDVA +L P TT++
Sbjct: 1 MEIDQLTSSTATEDQMEMIMMM---DKLPDFFGAY--NDVAHDLAPTTEFPGASTTSTTA 55
Query: 59 ASSTPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRG 118
S+ PHF+ +SPHI SSPSF ++ S+ + N T + Q S P + S WR
Sbjct: 56 VSAIPHFM--SSPHIASSPSFMSLPSSVPFTNNNTPM---QDESTPPFTSNLAAAERWRD 110
Query: 119 GAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSV 178
++ SQK+NSMAAMRE IFR+AAMQPIHIDP+SVKPPKRRNVKISKDPQSV
Sbjct: 111 MGEFPGANAYSTPSQKRNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSV 170
Query: 179 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP--- 235
AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA A+RP
Sbjct: 171 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQASRPSTS 230
Query: 236 ---AGIGFPATLTTGNYPPIIGKEYQQPA-----VRNGALHYGDA 272
GIGFP +++G+Y P +GK YQQ HYGDA
Sbjct: 231 SSSTGIGFPIAMSSGSYFP-MGKAYQQQQNAHHHRHQNVQHYGDA 274
>gi|224137546|ref|XP_002327153.1| predicted protein [Populus trichocarpa]
gi|222835468|gb|EEE73903.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/281 (60%), Positives = 194/281 (69%), Gaps = 25/281 (8%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNNDVAELL-PADHTSATITTNSNIA 59
ME D LKSA TEDQ EMM+M+ DKFPEFYGAC NDVA+ L P D A ++S
Sbjct: 1 MEIDLLKSA-TEDQTEMMMMI---DKFPEFYGAC--NDVADHLSPTDQFLAASVSDS--- 51
Query: 60 SSTPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRG- 118
S PHF +N PH + P F N+ S + + N T I Q S P F +P+ WRG
Sbjct: 52 -SVPHFNTDN-PHSANLPPFMNLPSTLSFNSNNTPI---QDQS-PRAFISNPSTSRWRGV 105
Query: 119 GAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSV 178
G ++ S+K+NSMAAMRE IFR+AAMQPIHIDP+SVKPPKRRNVKISKDPQSV
Sbjct: 106 GELPGTANDYATPSRKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSV 165
Query: 179 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP--- 235
AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA ANRP
Sbjct: 166 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQANRPTAT 225
Query: 236 AGIGFPATLTTGNYPPIIGK----EYQQPAVRNGALHYGDA 272
GIGFP +T+G+Y P +GK + HYGDA
Sbjct: 226 TGIGFPVAMTSGSYLP-VGKGCHQQPAHHHHHQNVQHYGDA 265
>gi|224063507|ref|XP_002301178.1| predicted protein [Populus trichocarpa]
gi|222842904|gb|EEE80451.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 167/278 (60%), Positives = 195/278 (70%), Gaps = 23/278 (8%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNNDVAELL-PADHTSATITTNSNIA 59
ME D+L+SA TEDQMEMM++M DK PEFY + NDVA+ L P + +A+ SNI+
Sbjct: 1 MEIDQLRSA-TEDQMEMMMLM---DKLPEFYDSY--NDVADHLSPTEFLAASA---SNIS 51
Query: 60 SSTPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGG 119
S HF +N PH SSP F N L ++ +S + ++ T Q P F SP+ WRG
Sbjct: 52 IS--HFNTDN-PHNASSPPFMN-LQSTLSSNSNSTPTQDQS---PQDFFPSPSSSRWRGL 104
Query: 120 AGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVA 179
++ SQK+NSMA MRE IFR+AAMQPI IDP+SVKPPKRRNVKISKDPQSVA
Sbjct: 105 GELPEANDYATPSQKKNSMATMREMIFRIAAMQPIQIDPESVKPPKRRNVKISKDPQSVA 164
Query: 180 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP---A 236
ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER ANRP
Sbjct: 165 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERFQANRPTTTT 224
Query: 237 GIGFPATLTTGNYPPIIGKEYQQPAV--RNGALHYGDA 272
GIGFP +T+G+Y +GK Y QP R +YGDA
Sbjct: 225 GIGFPVAMTSGSY-LAMGKGYHQPPARRRQNVQNYGDA 261
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/267 (50%), Positives = 176/267 (65%), Gaps = 23/267 (8%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNND-VAELLPADHTSATITTNSNIA 59
M+ ++LKS+++ + ++ +M+M M + PEF + NN+ + + P+D + SN
Sbjct: 1 MDCNQLKSSSSSSEEQIDMMLMMMMQLPEFSSSNGNNNTINQFPPSDQQFYGTSNASNNT 60
Query: 60 SSTPHFVDNNSPHI--VSSPSFSNMLSNSNTSLN--------GTSITAAQGTSIPTYFSY 109
+DN I SS SF+++ S S T+ N T + Q + P FS
Sbjct: 61 RPLADLIDNPPNQIPWSSSSSFTHLPSQSTTNTNTIYFTNNNSTPLMFQQQQTTPLMFSN 120
Query: 110 SPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNV 169
S NE A ++N S+K+NSMAAMRE IFR+AAMQPI+IDP+SVKPPKRRNV
Sbjct: 121 SSNE-----IAPNTNHYGTASPSEKRNSMAAMREMIFRIAAMQPIYIDPESVKPPKRRNV 175
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL-E 228
KISKDPQS+AARHRRERISE+IRILQR+VPGGTKMDTASMLDEAIHYVKFLKTQ++SL E
Sbjct: 176 KISKDPQSIAARHRRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLKSLQE 235
Query: 229 RAA---ANRP---AGIGFPATLTTGNY 249
RA+ +NR +G+GFP +L NY
Sbjct: 236 RASGANSNRTVAGSGLGFPVSLPKPNY 262
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/247 (51%), Positives = 154/247 (62%), Gaps = 46/247 (18%)
Query: 1 MEFDRLKSAATED-QMEMMVMMMQMDKFPEF----YGACTNNDVAELLPADHTSATITTN 55
M+ D LK++ +++ M+MM+ MMQM+KFPEF Y N A L P + TT
Sbjct: 1 MDVDILKTSTSDNISMDMMMTMMQMEKFPEFCEPFYNNNNNTSTAPLYPENELLINSTT- 59
Query: 56 SNIASSTPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERY 115
+ P FSN+++N N IT +S + P +
Sbjct: 60 -------------------TLPVFSNVINNPNV------ITPPPSSS--NFIQQQPMTPH 92
Query: 116 WRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDP 175
P +K+NS+AAMRE IFRVA MQPIHIDP+S+KPPKRRNVKISKDP
Sbjct: 93 LE------------PNLEKRNSVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDP 140
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
QSVAARHRRERISERI+ILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ+LE+A A+RP
Sbjct: 141 QSVAARHRRERISERIKILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRP 200
Query: 236 AG-IGFP 241
+GFP
Sbjct: 201 LNVVGFP 207
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/242 (51%), Positives = 155/242 (64%), Gaps = 18/242 (7%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIAS 60
M+ D +KS++ E+ M+MM +MMQM+K P+F +N + ++I +
Sbjct: 1 MDVDMMKSSSGEENMDMMTVMMQMEKLPDFCSEPFHNTTNTSTILQEIQFSNGNPTSIVA 60
Query: 61 STPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAA-----QGTSIPTYFSYSPNERY 115
S P + +N+PH SSP F N S GT I Q + F YS
Sbjct: 61 SPP--IYHNNPH-ASSPPFINPPPCS-MPFMGTPIQEPMTPPLQHNMMANKFKYS----- 111
Query: 116 WRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDP 175
SN+++ + +K+N A +R+ FR+AAMQPIHIDP+SVKPPKRRNVKISKDP
Sbjct: 112 ----TPFSNANSFLSSIEKKNPTAEIRDMTFRIAAMQPIHIDPESVKPPKRRNVKISKDP 167
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
QSVAARHRRERISER+RILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSLE+A AN P
Sbjct: 168 QSVAARHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEQAGANTP 227
Query: 236 AG 237
G
Sbjct: 228 NG 229
>gi|225438732|ref|XP_002277850.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|296082413|emb|CBI21418.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/118 (86%), Positives = 109/118 (92%), Gaps = 1/118 (0%)
Query: 130 PLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISE 189
P S+K+NSMAAMRE IF +A MQPIHIDP+SVKPPKRRNVKISKDPQSVAARHRRERISE
Sbjct: 109 PPSEKKNSMAAMREMIFSIAVMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISE 168
Query: 190 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG-IGFPATLTT 246
RIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSLERA A+RP G +GFPAT T+
Sbjct: 169 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKNQVQSLERAGAHRPMGVVGFPATTTS 226
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/113 (80%), Positives = 99/113 (87%), Gaps = 6/113 (5%)
Query: 116 WRGG---AGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKIS 172
WRG +G N ST +QK+NSMAAMRE IFR+AAMQP+HIDP+SVKPPKRRNVKIS
Sbjct: 49 WRGTGELSGVCNLSTP---AQKRNSMAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKIS 105
Query: 173 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
KDPQSVAARHRRERISE+IRILQRLVPGGTKMDTASMLDEAIHYV FLKTQ +
Sbjct: 106 KDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVXFLKTQTE 158
>gi|356496900|ref|XP_003517303.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 251
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/255 (50%), Positives = 161/255 (63%), Gaps = 39/255 (15%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNNDVAE------LLPADHTSATITT 54
M+ D+LK++ ++ M+MM+MMMQM+KFPEF NN+ L P + TT
Sbjct: 1 MDVDKLKTSTSDSSMDMMMMMMQMEKFPEFCEPFYNNNTTTTTTTTLLYPENEYFLNSTT 60
Query: 55 NSNIASSTPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNER 114
++ P F + N+P++++ P T +N ++ P PN
Sbjct: 61 -----TTLPVFPNVNNPNVITPPP--------TTLINPPPPSSNFVLQQPMTPHLEPN-- 105
Query: 115 YWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKD 174
+K+NS+AAMRE IFRVA MQP+HIDP+S+KPPKRRNVKISKD
Sbjct: 106 -----------------PEKKNSVAAMREMIFRVAVMQPVHIDPESIKPPKRRNVKISKD 148
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR 234
PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ+LE+A A R
Sbjct: 149 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGATR 208
Query: 235 PAG-IGFPATLTTGN 248
P +GFP T++ N
Sbjct: 209 PLNVVGFPTTVSNAN 223
>gi|356518097|ref|XP_003527719.1| PREDICTED: uncharacterized protein LOC100788158 [Glycine max]
gi|83853832|gb|ABC47864.1| bhelix-loop-helix transcription factor [Glycine max]
Length = 258
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 143/208 (68%), Gaps = 18/208 (8%)
Query: 65 FVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGGAGDSN 124
+DNN+P +S +S+ S ++ + T I+ + + T +E+ + G ++N
Sbjct: 55 LIDNNNP--LSPIPWSSSYSFTHLPASTTEISFSNNSHPTTPIMLQEHEQQYEGA--NAN 110
Query: 125 SSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRR 184
G +K+NSMAAMRE IFR+AAMQPIHIDP+SVK PKRRNVKISKDPQSVAARHRR
Sbjct: 111 PYGG----EKRNSMAAMREMIFRMAAMQPIHIDPESVKAPKRRNVKISKDPQSVAARHRR 166
Query: 185 ERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA--------NRPA 236
ERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA++ N
Sbjct: 167 ERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERASSANNNIRPLNAAG 226
Query: 237 GIGFPATLTTGNYPPIIGKEYQQPAVRN 264
IGFP T Y P+ K YQ P + N
Sbjct: 227 QIGFPVASTP--YFPLPSKPYQAPNMDN 252
>gi|356509739|ref|XP_003523603.1| PREDICTED: transcription factor HEC1-like [Glycine max]
gi|83853819|gb|ABC47852.1| bHelix-loop-helix transcription factor [Glycine max]
Length = 264
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/266 (51%), Positives = 162/266 (60%), Gaps = 40/266 (15%)
Query: 12 EDQMEMMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIASSTPHFVDNNSP 71
E QM++M MM+Q + P+ T+ P DH N +DNN+P
Sbjct: 8 EYQMDVMTMMLQ--QLPQLSEPYTHTMEGFHPPEDHFYG------NNTMPLADLIDNNNP 59
Query: 72 HIVSSPS----FSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGGAGDSNSST 127
H S F+++ S++ + N I + +SP+E Y A N
Sbjct: 60 HSSMPWSSSYSFTHLPSSTISFSNNNPIMLQEQQQ------HSPSETYEDANA---NPYG 110
Query: 128 GVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERI 187
G +K++SMAAMRE IFR+AAMQPIHIDP+SVK PKRRNVKISKDPQSVAARHRRERI
Sbjct: 111 G----EKRSSMAAMREMIFRMAAMQPIHIDPESVKQPKRRNVKISKDPQSVAARHRRERI 166
Query: 188 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA-AAN---RP-------- 235
SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL+RA +AN RP
Sbjct: 167 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRASSANNNIRPLGTSTVNA 226
Query: 236 AGIGFPATL-TTGNYPPI--IGKEYQ 258
GIGFP + TT N P + K YQ
Sbjct: 227 TGIGFPVAMSTTSNSTPYFPLPKPYQ 252
>gi|449447251|ref|XP_004141382.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524104|ref|XP_004169063.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 238
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 125/163 (76%), Gaps = 18/163 (11%)
Query: 99 QGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDP 158
Q +++P F + + R+ G+ ++ S QKQ S+AAMRE IFR+A MQPIHIDP
Sbjct: 77 QQSTVP--FPGTSSSRWRNSGSCETESL------QKQRSVAAMREMIFRIAVMQPIHIDP 128
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 218
++VKPPKRRNVKIS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK
Sbjct: 129 EAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 188
Query: 219 FLKTQVQSLERA---AANR-------PAGIGFPATLTTGNYPP 251
FLKTQVQSLERA A NR P+ +GFP ++TG+Y P
Sbjct: 189 FLKTQVQSLERAAVSAGNRPITGVGAPSSVGFPLEMSTGSYIP 231
>gi|255565212|ref|XP_002523598.1| DNA binding protein, putative [Ricinus communis]
gi|223537160|gb|EEF38793.1| DNA binding protein, putative [Ricinus communis]
Length = 278
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 108/119 (90%)
Query: 123 SNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARH 182
SN+++ + +K+NS AA+RE IFR+AAMQPIHIDP+S+KPPKRRNVKISKDPQSVAARH
Sbjct: 127 SNANSFLSSMEKKNSTAAIREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARH 186
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGFP 241
RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSLE+A ANR G GFP
Sbjct: 187 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEQAGANRSMGAGFP 245
>gi|356541813|ref|XP_003539367.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 242
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/247 (51%), Positives = 154/247 (62%), Gaps = 46/247 (18%)
Query: 1 MEFDRLKSAATED-QMEMMVMMMQMDKFPEF----YGACTNNDVAELLPADHTSATITTN 55
M+ D LK++ +++ M+MM+ MMQM+KFPEF Y N A L P + TT
Sbjct: 1 MDVDILKTSTSDNISMDMMMTMMQMEKFPEFCEPFYNNNNNTSTAPLYPENELLINSTT- 59
Query: 56 SNIASSTPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERY 115
+ P FSN+++N N IT +S + P +
Sbjct: 60 -------------------TLPVFSNVINNPNV------ITPPPSSS--NFIQQQPMTPH 92
Query: 116 WRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDP 175
P +K+NS+AAMRE IFRVA MQPIHIDP+S+KPPKRRNVKISKDP
Sbjct: 93 LE------------PNLEKRNSVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDP 140
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ+LE+A A+RP
Sbjct: 141 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRP 200
Query: 236 AG-IGFP 241
+GFP
Sbjct: 201 LNVVGFP 207
>gi|357482887|ref|XP_003611730.1| Transcription factor HEC2 [Medicago truncatula]
gi|355513065|gb|AES94688.1| Transcription factor HEC2 [Medicago truncatula]
Length = 247
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 112/129 (86%), Gaps = 3/129 (2%)
Query: 122 DSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAAR 181
++NSS P +K+NSM+AMRE IFR+A MQPI+IDP+++KPPKR+NVKISKDPQSVAAR
Sbjct: 96 NNNSSLSYP--EKKNSMSAMREMIFRMAVMQPINIDPETIKPPKRKNVKISKDPQSVAAR 153
Query: 182 HRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG-IGF 240
HRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ+LE+ ANRP +GF
Sbjct: 154 HRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGANRPLNVVGF 213
Query: 241 PATLTTGNY 249
P ++ N+
Sbjct: 214 PGVVSNANF 222
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 117/182 (64%), Gaps = 27/182 (14%)
Query: 49 SATITTNSNIASSTPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFS 108
S+T N+ + TPH + P I FS+ TSL T+ PT
Sbjct: 17 SSTFFPNNTAPNCTPHVL----PIIPPPAYFSDYSPPPGTSLFQTT---------PTIIP 63
Query: 109 YSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRN 168
+P + G +G MAAMRE IFR+AAMQP+ IDP+++K PKRRN
Sbjct: 64 ETPARQRRSGVSG--------------GGMAAMREMIFRIAAMQPVEIDPEAIKAPKRRN 109
Query: 169 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
V+ISKDPQSVAARHRRERIS++IRILQRLVPGGTKMDTASMLDEA+HYVKFLK QVQ+LE
Sbjct: 110 VRISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLE 169
Query: 229 RA 230
++
Sbjct: 170 QS 171
>gi|224084350|ref|XP_002307268.1| predicted protein [Populus trichocarpa]
gi|222856717|gb|EEE94264.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/258 (50%), Positives = 164/258 (63%), Gaps = 21/258 (8%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIAS 60
M+ D +KS++ E+ M+MM MMMQM+K P+F C+ P +T+ T T I
Sbjct: 1 MDVDMMKSSSGEEHMDMMTMMMQMEKLPDF---CSE-------PFYNTTNTSTLLQEIQF 50
Query: 61 STPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNE----RYW 116
S + N + S P + N ++S +N GT I + S + +
Sbjct: 51 SNGNPTANT---VASPPIWHNPHASSPPLINPPCSMPFMGTPIQEPVTPSLQHDMMAKKF 107
Query: 117 RGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQ 176
G SN+++ + +K+NS +RE IFR+AAMQP HIDP+SVKPPKR+NVKISKDPQ
Sbjct: 108 EYGTPFSNANSFLSSIEKKNSTTTIREMIFRIAAMQPAHIDPESVKPPKRKNVKISKDPQ 167
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPA 236
SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSLE+ ANRP
Sbjct: 168 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKMQVQSLEQTGANRPM 227
Query: 237 GIGFPATLTTGNYPPIIG 254
G GF + TG P +G
Sbjct: 228 G-GF---VITGVTMPSVG 241
>gi|356511883|ref|XP_003524651.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 273
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/102 (88%), Positives = 98/102 (96%)
Query: 132 SQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERI 191
S+K+NSMAAMRE IFR+A MQP+HIDP+S+KPPKRRNVKISKDPQSVAARHRRERISERI
Sbjct: 112 SEKKNSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERI 171
Query: 192 RILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
RILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ+LE+A AN
Sbjct: 172 RILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGAN 213
>gi|413921862|gb|AFW61794.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 153/242 (63%), Gaps = 21/242 (8%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATI---TTNSN 57
M+FD L S E Q+E+M M+Q+++ F ++ ++P+ S + TT+ +
Sbjct: 1 MDFDMLNSH-PEAQLELMKAMLQLEQLTAF--PLPDHGAMMMVPSTPPSPGMPQATTHHH 57
Query: 58 IASSTPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWR 117
SS PH H+ + + + + + GT+ Y +++
Sbjct: 58 YFSSVPH-------HMSAGANGRGVYDDDHQYSQGTAAPCNGSARSSEYVAHAQGPVAGG 110
Query: 118 GGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQS 177
G +G+S ++T V +S +AMRE IFRVAA+QP++IDP+ V+PPKRRNV+IS DPQS
Sbjct: 111 GNSGESTAATSV-----GSSSSAMREMIFRVAALQPVNIDPEMVRPPKRRNVRISTDPQS 165
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA---NR 234
VAAR RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA R
Sbjct: 166 VAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAASGRR 225
Query: 235 PA 236
PA
Sbjct: 226 PA 227
>gi|356565592|ref|XP_003551023.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 299
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/97 (89%), Positives = 93/97 (95%)
Query: 136 NSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
NSMAAMRE IFR+A MQP+HIDP+S+KPPKRRNVKISKDPQSVAARHRRERISERIRILQ
Sbjct: 119 NSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 178
Query: 196 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
RLVPGGTKMDTASMLDEAIHYVKFLK QVQ+LE+A A
Sbjct: 179 RLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGA 215
>gi|297819712|ref|XP_002877739.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
gi|297323577|gb|EFH53998.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 114/169 (67%), Gaps = 24/169 (14%)
Query: 82 MLSNSNTS---LNGTSITAAQGTSIPTY-----FSYSPNERY----WRGGAGDSNSSTGV 129
MLS SNT + T +IP + F Y+P+ RGG D+ +
Sbjct: 29 MLSESNTHPFFFDPTHTHLPFDQTIPHHQPGLSFRYAPSTSSSLPDKRGGCSDNAN---- 84
Query: 130 PLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISE 189
MAAMRE IFR+A MQPIHIDP+SVKPPKR+NV+ISKDPQSVAARHRRERISE
Sbjct: 85 --------MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISE 136
Query: 190 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
RIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSLE A G+
Sbjct: 137 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGM 185
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/101 (70%), Positives = 85/101 (84%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++R+AAMQP+ IDP +VK P+RRNV+IS+DPQSVAARHRRERISER+R+LQRL
Sbjct: 126 LGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQRL 185
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
VPGGTKMDTASMLDEAI Y+KFLK QVQ L A G+
Sbjct: 186 VPGGTKMDTASMLDEAIRYIKFLKRQVQELHSAGGQSSHGM 226
>gi|15240189|ref|NP_201507.1| transcription factor HEC1 [Arabidopsis thaliana]
gi|75309085|sp|Q9FHA7.1|HEC1_ARATH RecName: Full=Transcription factor HEC1; AltName: Full=Basic
helix-loop-helix protein 88; Short=AtbHLH88; Short=bHLH
88; AltName: Full=Protein HECATE 1; AltName:
Full=Transcription factor EN 118; AltName: Full=bHLH
transcription factor bHLH088
gi|20127097|gb|AAM10961.1|AF488618_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|10177593|dbj|BAB10940.1| unnamed protein product [Arabidopsis thaliana]
gi|110737755|dbj|BAF00816.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332010913|gb|AED98296.1| transcription factor HEC1 [Arabidopsis thaliana]
Length = 241
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 135/219 (61%), Gaps = 38/219 (17%)
Query: 17 MMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIASSTPHFVDNNSPHIVSS 76
M +MM QM+K PEF C N + DH + T + +ST H+ ++S + +
Sbjct: 6 MNMMMHQMEKLPEF---CNPN--SSFFSPDHNN----TYPFLFNST-HYQSDHS--MTNE 53
Query: 77 PSF---SNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQ 133
P F S +L+N + S SPN Y + + +
Sbjct: 54 PGFRYGSGLLTNPS--------------------SISPNTAY---SSVFLDKRNNSNNNN 90
Query: 134 KQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRI 193
+MAAMRE IFR+A MQPIHIDP++VKPPKRRNV+ISKDPQSVAARHRRERISERIRI
Sbjct: 91 NGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRI 150
Query: 194 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
LQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSLE A
Sbjct: 151 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEQAV 189
>gi|51970182|dbj|BAD43783.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
Length = 231
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/226 (48%), Positives = 130/226 (57%), Gaps = 45/226 (19%)
Query: 17 MMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIASSTPHFVDNNSPHIVSS 76
M +MM QM+K PE + N + + + SN + P F + H+
Sbjct: 8 MNMMMQQMEKLPEHFSNSNPNPNPHNI-------MMLSESN---THPFFFNPTHSHL--- 54
Query: 77 PSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNER----YWRGGAGDSNSSTGVPLS 132
F + + LN F Y+P+ RGG D+
Sbjct: 55 -PFDQTMPHHQPGLN---------------FRYAPSPSSPLPEKRGGCSDN--------- 89
Query: 133 QKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIR 192
+MAAMRE IFR+A MQPIHIDP+SVKPPKR+NV+ISKDPQSVAARHRRERISERIR
Sbjct: 90 ---ANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIR 146
Query: 193 ILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
ILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSLE A G+
Sbjct: 147 ILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGM 192
>gi|15229725|ref|NP_190602.1| transcription factor HEC2 [Arabidopsis thaliana]
gi|75313649|sp|Q9SND4.1|HEC2_ARATH RecName: Full=Transcription factor HEC2; AltName: Full=Basic
helix-loop-helix protein 37; Short=AtbHLH37; Short=bHLH
37; AltName: Full=Protein HECATE 2; AltName:
Full=Transcription factor EN 117; AltName: Full=bHLH
transcription factor bHLH037
gi|6523044|emb|CAB62312.1| putative protein [Arabidopsis thaliana]
gi|37202028|gb|AAQ89629.1| At3g50330 [Arabidopsis thaliana]
gi|51969500|dbj|BAD43442.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|51969966|dbj|BAD43675.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|332645132|gb|AEE78653.1| transcription factor HEC2 [Arabidopsis thaliana]
Length = 231
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/226 (48%), Positives = 130/226 (57%), Gaps = 45/226 (19%)
Query: 17 MMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIASSTPHFVDNNSPHIVSS 76
M +MM QM+K PE + N + + + SN + P F + H+
Sbjct: 8 MNMMMQQMEKLPEHFSNSNPNPNPHNI-------MMLSESN---THPFFFNPTHSHL--- 54
Query: 77 PSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNER----YWRGGAGDSNSSTGVPLS 132
F + + LN F Y+P+ RGG D+
Sbjct: 55 -PFDQTMPHHQPGLN---------------FRYAPSPSSSLPEKRGGCSDN--------- 89
Query: 133 QKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIR 192
+MAAMRE IFR+A MQPIHIDP+SVKPPKR+NV+ISKDPQSVAARHRRERISERIR
Sbjct: 90 ---ANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIR 146
Query: 193 ILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
ILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSLE A G+
Sbjct: 147 ILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGM 192
>gi|297797671|ref|XP_002866720.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
gi|297312555|gb|EFH42979.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/95 (89%), Positives = 89/95 (93%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
MAAMRE IFR+A MQPIHIDP++VKPPKRRNV+ISKDPQSVAARHRRERISERIRILQRL
Sbjct: 95 MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 154
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
VPGGTKMDTASMLDEAIHYVKFLK QVQSLE A
Sbjct: 155 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEQAV 189
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 89/108 (82%), Gaps = 2/108 (1%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++++AAMQP+ IDP +++ PKRRNV+IS DPQSVAARHRRERISE+IRILQRL
Sbjct: 110 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 169
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA--ANRPAGIGFPAT 243
VPGGTKMDTASMLDEAI YVKFLK Q++ L+ + + P IGF T
Sbjct: 170 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSISHPSQPPQCIGFATT 217
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 83/91 (91%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++R+AAMQP+ IDP +VK P+RRNV+IS+DPQSVAARHRRERISER+R+LQRL
Sbjct: 126 LGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQRL 185
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGGTKMDTASMLDEAI Y+KFLK QVQ L+
Sbjct: 186 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 216
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 83/91 (91%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++R+AAMQP+ IDP +VK P+RRNV+IS+DPQSVAARHRRERISER+R+LQRL
Sbjct: 125 LGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQRL 184
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGGTKMDTASMLDEAI Y+KFLK QVQ L+
Sbjct: 185 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 215
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 89/108 (82%), Gaps = 2/108 (1%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++++AAMQP+ IDP +++ PKRRNV+IS DPQSVAARHRRERISE+IRILQRL
Sbjct: 97 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 156
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLER--AAANRPAGIGFPAT 243
VPGGTKMDTASMLDEAI YVKFLK Q++ L+ ++N P IG T
Sbjct: 157 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSIPQSSNPPQCIGVATT 204
>gi|42408644|dbj|BAD09865.1| bHLH protein family-like [Oryza sativa Japonica Group]
gi|125561863|gb|EAZ07311.1| hypothetical protein OsI_29558 [Oryza sativa Indica Group]
gi|125603724|gb|EAZ43049.1| hypothetical protein OsJ_27638 [Oryza sativa Japonica Group]
Length = 246
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 139/246 (56%), Gaps = 42/246 (17%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDK---FPEFYGACTNNDVAELLPADHTSATITTNSN 57
MEFD L S E Q+E+M M+Q+++ FP+ +G ++P TS +
Sbjct: 1 MEFDMLNSNP-EAQLELMNTMLQLEQLSAFPDHHGM--------VVPCSPTSPCMGAQGG 51
Query: 58 IASSTPHF--VDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERY 115
HF V++ H V S +N G Y P Y
Sbjct: 52 HH----HFSSVNHQPAHGVVSSGGAN---------------TGDGYRDQYYTQLLPAAAY 92
Query: 116 WRGGAGDSNS-----STGVPLSQKQNSM----AAMRETIFRVAAMQPIHIDPDSVKPPKR 166
G S +T P S AAMRE IF +AA+QP++IDP++V+PPKR
Sbjct: 93 SNAAGGGRGSEYHTTTTTRPASGGGGDGGVGPAAMREMIFHIAALQPVNIDPETVRPPKR 152
Query: 167 RNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQS 226
RNV+IS DPQSVAAR RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQS
Sbjct: 153 RNVRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQS 212
Query: 227 LERAAA 232
LERAAA
Sbjct: 213 LERAAA 218
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 82/91 (90%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++R+AAMQP+ IDP +VK P+RRNV+IS+DPQSV ARHRRERISER+R+LQRL
Sbjct: 126 LGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVVARHRRERISERVRVLQRL 185
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGGTKMDTASMLDEAI Y+KFLK QVQ L+
Sbjct: 186 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 216
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/109 (66%), Positives = 89/109 (81%), Gaps = 3/109 (2%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++++AAMQP+ IDP +++ PKRRNV+IS DPQSVAARHRRERISE+IRILQRL
Sbjct: 102 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 161
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQV---QSLERAAANRPAGIGFPAT 243
VPGGTKMDTASMLDEAI YVKFLK Q+ QS+ + + P IG +T
Sbjct: 162 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSIPQPSRQPPQCIGVAST 210
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 83/91 (91%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++++AAMQP+ IDP +++ PKRRNV+IS+DPQSVAARHRRERISE+IRILQRL
Sbjct: 87 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISEDPQSVAARHRRERISEKIRILQRL 146
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 147 VPGGTKMDTASMLDEAIRYVKFLKRQIKLLQ 177
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 90/113 (79%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++++A MQP+ IDP +++ PKR+NV+IS DPQSVAARHRRERISE+IRILQRL
Sbjct: 98 LGAMKEMMYKIAVMQPVDIDPAAIRKPKRKNVRISDDPQSVAARHRRERISEKIRILQRL 157
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGFPATLTTGNYP 250
VPGGTKMDTASMLDEAIHYVKFLK Q++ L+ ++ P T T+ N P
Sbjct: 158 VPGGTKMDTASMLDEAIHYVKFLKRQIRLLQSTPNSQHHQQHPPPTPTSCNVP 210
>gi|242081721|ref|XP_002445629.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
gi|241941979|gb|EES15124.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
Length = 269
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 154/254 (60%), Gaps = 26/254 (10%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKF-----PEFYGACTNNDVAELLPADHTSATITTN 55
M+FD L S E Q+E+M M+Q+++ P+ +GA V P+ ++
Sbjct: 1 MDFDMLNSH-PEAQLELMNAMLQLEQLTAFPLPDHHGAMMM--VPSSPPSPPGMQQAASH 57
Query: 56 SNIASSTPHFVD---NNSPHIVSSP-------SFSNMLSNSNTSLNGTSITAAQGTSIPT 105
+ SS PH + NNS +S +++ +S NG++ S
Sbjct: 58 HHHFSSVPHHMSSGANNSGRGGGGGVYNDHHHQYSQVVTADVSSCNGSA-----RRSDSE 112
Query: 106 YFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPK 165
Y +++ + + GG G + SS +AMRE IFRVAA+QP++IDP+ V+PPK
Sbjct: 113 YVAHAQQDDHAAGGGGGNYSSGESGGGTAAVGSSAMREMIFRVAALQPVNIDPEMVRPPK 172
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
RRNV+IS DPQSVAAR RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ
Sbjct: 173 RRNVRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 232
Query: 226 SLERAAA---NRPA 236
SLERAAA RPA
Sbjct: 233 SLERAAAASGRRPA 246
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 90/111 (81%), Gaps = 2/111 (1%)
Query: 139 AAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLV 198
AM+E ++++AAMQP+ IDP +++ PKRRNV+IS DPQSVAARHRRERISE+IRILQRLV
Sbjct: 62 GAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLV 121
Query: 199 PGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGFPATLTTGNY 249
PGGTKMDTASMLDEAI YVKFLK Q++ L+ + + P A L+T ++
Sbjct: 122 PGGTKMDTASMLDEAIRYVKFLKRQIRQLQ--SNHHPLPTDVTACLSTPDW 170
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 82/91 (90%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E +F++AAMQP++IDP ++ PKRRNV+IS DPQSVAARHRRERISE+IRILQRL
Sbjct: 71 LGAMKEMMFKIAAMQPVNIDPATIYKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 130
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 131 VPGGTKMDTASMLDEAIRYVKFLKKQIRLLQ 161
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 101/152 (66%), Gaps = 21/152 (13%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++++A MQP+ IDP SV+ PKRRNV+IS DPQSVAARHRRERISE+IRILQRL
Sbjct: 82 LGAMKEMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 141
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIG--------------FPAT 243
VPGGTKMDTASMLDEAI YVKFLK Q++ L+ ++ G F ++
Sbjct: 142 VPGGTKMDTASMLDEAILYVKFLKRQIRLLQSTSSPLINCTGAAPNSDYWPFAPNIFHSS 201
Query: 244 LTTGNYP---PIIGKEYQQPAVRNGALHYGDA 272
+T N P+IG E+ G H GDA
Sbjct: 202 ITNTNASMDIPVIGMEFNT----RGHGHAGDA 229
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 89/109 (81%), Gaps = 2/109 (1%)
Query: 141 MRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPG 200
M+E ++++AAMQP+ IDP +++ PKRRNV+IS DPQSVAARHRRERISE+IRILQRLVPG
Sbjct: 1 MKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPG 60
Query: 201 GTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGFPATLTTGNY 249
GTKMDTASMLDEAI YVKFLK Q++ L+ + + P A L+T ++
Sbjct: 61 GTKMDTASMLDEAIRYVKFLKRQIRQLQ--SNHHPLPTDVTACLSTPDW 107
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 81/91 (89%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++++A MQP+ IDP SV+ PKRRNV+IS DPQSVAARHRRERISE+IRILQRL
Sbjct: 91 LGAMKEMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 150
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 151 VPGGTKMDTASMLDEAIRYVKFLKRQIRFLQ 181
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 81/91 (89%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++++AAMQP+ IDP +++ PKRRNV+IS DP SVAARHRRERISE+IRILQRL
Sbjct: 66 LGAMKEMMYKIAAMQPVDIDPATIRRPKRRNVRISDDPASVAARHRRERISEKIRILQRL 125
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 126 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 156
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 87/109 (79%)
Query: 119 GAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSV 178
G +S TG + + + AM+E ++++AAMQP+ IDP +++ PKRRNV+IS DPQS+
Sbjct: 63 GYSTPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSI 122
Query: 179 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
AAR RRERISE+IRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L
Sbjct: 123 AARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
>gi|357141633|ref|XP_003572294.1| PREDICTED: uncharacterized protein LOC100835736 [Brachypodium
distachyon]
Length = 252
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/91 (87%), Positives = 88/91 (96%)
Query: 139 AAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLV 198
AAMRE IFR+AA+QP++IDP++V+PPKRRNV+IS DPQSVAAR RRERISERIRILQRLV
Sbjct: 133 AAMREMIFRIAALQPVNIDPETVRPPKRRNVRISTDPQSVAARVRRERISERIRILQRLV 192
Query: 199 PGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
PGGTKMDTASMLDEAIHYVKFLKTQVQSLER
Sbjct: 193 PGGTKMDTASMLDEAIHYVKFLKTQVQSLER 223
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 81/94 (86%)
Query: 135 QNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRIL 194
+ + AM+E ++RVAAMQP+ IDP ++ PKR+NV+IS DPQSVAAR RRERISE+IRIL
Sbjct: 4 EEELGAMKEMMYRVAAMQPVDIDPATIHKPKRKNVRISDDPQSVAARLRRERISEKIRIL 63
Query: 195 QRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
QRLVPGG KMDTASMLDEAI YVKFLK Q++SL+
Sbjct: 64 QRLVPGGRKMDTASMLDEAIRYVKFLKRQIRSLQ 97
>gi|226497552|ref|NP_001147658.1| LOC100281267 [Zea mays]
gi|195612888|gb|ACG28274.1| DNA binding protein [Zea mays]
gi|414885734|tpg|DAA61748.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 85/90 (94%)
Query: 140 AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 199
AMRE IF +AA+QP+ IDP++V+PPKRRNV+ISKDPQSVAAR RRERISERIR LQRLVP
Sbjct: 124 AMREAIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRTLQRLVP 183
Query: 200 GGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
GGTKMDTASMLDEAIHYVKFLK+QVQSLER
Sbjct: 184 GGTKMDTASMLDEAIHYVKFLKSQVQSLER 213
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 80/91 (87%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++R+AAMQP+ IDP +++ PKRRNV+IS DPQSVAAR RRERISE+IRILQRL
Sbjct: 77 LGAMKEMMYRIAAMQPVEIDPATIRKPKRRNVRISDDPQSVAARLRRERISEKIRILQRL 136
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGG KMDTASML+EAI YVKFLK Q++ L+
Sbjct: 137 VPGGRKMDTASMLEEAIRYVKFLKRQIRLLQ 167
>gi|242044912|ref|XP_002460327.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
gi|241923704|gb|EER96848.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
Length = 261
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/97 (80%), Positives = 86/97 (88%)
Query: 132 SQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERI 191
S S AMRE IF +AA+QP+ IDP++V+PPKRRNV+ISKDPQSVAAR RRERISERI
Sbjct: 133 SSSPTSADAMREAIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERI 192
Query: 192 RILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
R LQRLVPGGTKMDTASMLDEAIHYVKFLK+QVQSLE
Sbjct: 193 RTLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLE 229
>gi|115479527|ref|NP_001063357.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|51535231|dbj|BAD38280.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|51536285|dbj|BAD38453.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|113631590|dbj|BAF25271.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|125563981|gb|EAZ09361.1| hypothetical protein OsI_31634 [Oryza sativa Indica Group]
gi|215697773|dbj|BAG91966.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765762|dbj|BAG87459.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 236
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/89 (86%), Positives = 85/89 (95%)
Query: 140 AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 199
AMRE IF +AA+QP+ IDP++V+PPKRRNV+ISKDPQSVAAR RRERISERIRILQRLVP
Sbjct: 116 AMREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRLVP 175
Query: 200 GGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
GGTKMDTASMLDEAIHYVKFLK+QVQSLE
Sbjct: 176 GGTKMDTASMLDEAIHYVKFLKSQVQSLE 204
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 95/131 (72%), Gaps = 12/131 (9%)
Query: 117 RGGAGDSNSSTGVPLSQKQNS--------MAAMRETIFRVAAMQPI-HIDPDSVKPPKRR 167
+GG+ ++S+ P Q Q MA MRET++R+A +PI D PKRR
Sbjct: 226 QGGSDMEHASSQAPNEQHQGGGGAGAGAGMANMRETLYRMAVWRPITATDCLGGSKPKRR 285
Query: 168 NVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQS- 226
NV+IS DPQ+VAARHRRERIS +IRILQRLVPGGTKMDTASMLDEAIHYVK+LK+QVQ+
Sbjct: 286 NVRISSDPQTVAARHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAM 345
Query: 227 --LERAAANRP 235
LE+++ ++P
Sbjct: 346 EMLEQSSGDQP 356
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 103/143 (72%), Gaps = 8/143 (5%)
Query: 92 GTSITAAQGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAM 151
G + T + +IP+ SP + + R +G+ +++ V L + A+MR +FR A+
Sbjct: 365 GLTATYSDSLTIPSLMQPSP-QPFLRS-SGNCGAASPVDLDE----FASMRAILFRHAS- 417
Query: 152 QPI-HIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASML 210
QP+ ++ + PKRRNV+ISKDPQSVAARHRRERIS+RIR+LQRLVPGGTKMDTASML
Sbjct: 418 QPVPSLEEIASSRPKRRNVRISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASML 477
Query: 211 DEAIHYVKFLKTQVQSLERAAAN 233
DEAIHYVKFLK Q+Q+LE+ N
Sbjct: 478 DEAIHYVKFLKLQLQTLEQIGNN 500
>gi|326530726|dbj|BAK01161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 238
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 133/230 (57%), Gaps = 20/230 (8%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIAS 60
M+FD L S++ E Q+ +M M+Q+++ N+ + A + T S+ S
Sbjct: 1 MDFDLLMSSSPEAQLALMNTMLQLEQ-------ALNDQSLMMAEASPPISPAQTPSHSLS 53
Query: 61 STPHFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGGA 120
PH +P +M + A + + SP GA
Sbjct: 54 PPPHVSTACAPTDAGYFYHQDM----HAQAAAAGYADAGTGGVHQEYVVSP-------GA 102
Query: 121 GDSNSSTGVP--LSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSV 178
+ TG P S +S AMRE IF +AA+QP+ IDP++V+PPKRRNV+ SKDPQSV
Sbjct: 103 VVFDGPTGAPQGYSSSPSSSDAMREMIFHIAALQPVDIDPEAVRPPKRRNVRTSKDPQSV 162
Query: 179 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
AAR RRERISERIR+LQRLVPGGTKMDTASMLDEAIHYVKFLK+QVQSLE
Sbjct: 163 AARLRRERISERIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLE 212
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 83/102 (81%), Gaps = 4/102 (3%)
Query: 138 MAAMRETIFRVAAMQPI-HIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
M MRET++R+A +PI D PKRRNV+IS DPQ+VAARHRRERIS +IRILQR
Sbjct: 256 MENMRETLYRMAVWRPITATDCLGGSKPKRRNVRISSDPQTVAARHRRERISTKIRILQR 315
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQS---LERAAANRP 235
LVPGGTKMDTASMLDEAIHYVK+LK+QVQ+ LE+++ ++P
Sbjct: 316 LVPGGTKMDTASMLDEAIHYVKYLKSQVQAMEMLEQSSGDQP 357
>gi|414869866|tpg|DAA48423.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/88 (84%), Positives = 83/88 (94%)
Query: 141 MRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPG 200
MRE +FRVAA+QP++I+P+ V+PPKRRN +IS DPQSVAAR RRERISERIR+LQRLVPG
Sbjct: 135 MREMVFRVAALQPVNIEPEMVRPPKRRNARISTDPQSVAARVRRERISERIRVLQRLVPG 194
Query: 201 GTKMDTASMLDEAIHYVKFLKTQVQSLE 228
GTKMDTASMLDEAIHYVKFLKTQVQSLE
Sbjct: 195 GTKMDTASMLDEAIHYVKFLKTQVQSLE 222
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 82/97 (84%), Gaps = 5/97 (5%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSV-----KPPKRRNVKISKDPQSVAARHRRERISERI 191
+MA ++E I+R AAM+P+++ P+ + + P+R+NV+IS DPQ+VAAR RRER+SER+
Sbjct: 253 AMAQVKEMIYRAAAMRPVNLGPEVIAAAAAEKPRRKNVRISSDPQTVAARLRRERVSERL 312
Query: 192 RILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
R+LQ+LVPGG+KMDTASMLDEA Y+KFLK+QVQ+LE
Sbjct: 313 RVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALE 349
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
++A M+E I+R AA +P++ + + PKR+NVKIS DPQ+VAARHRRERI+E+IR+LQ+
Sbjct: 306 AIAQMKEMIYRAAAFRPVNFGLEVAEKPKRKNVKISTDPQTVAARHRRERINEKIRVLQK 365
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGFPATLTTGNYPP 251
LVPGG+KMDTASMLDEA +Y+KFL++QV++LE + N+ + P T ++ P
Sbjct: 366 LVPGGSKMDTASMLDEAANYLKFLRSQVKALE-SLGNKVDAMNCPPTSIAFSFNP 419
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
++A M+E I+R AA +P++ + V+ KR+NVKIS DPQ+VAARHRRERISE+IR+LQ+
Sbjct: 304 AIAQMKEMIYRAAAFRPVNFGLEVVEKLKRKNVKISTDPQTVAARHRRERISEKIRVLQK 363
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGFPATLTTGNYPP 251
LVPGG+KMDTASMLDEA +Y+KFL++QV++LE + N+ + P T ++ P
Sbjct: 364 LVPGGSKMDTASMLDEAANYLKFLRSQVKALE-SLGNKVDAMNCPPTSIAFSFNP 417
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 81/103 (78%), Gaps = 9/103 (8%)
Query: 137 SMAAMRETIFRVAAMQPIHI---------DPDSVKPPKRRNVKISKDPQSVAARHRRERI 187
++A ++E I+R AAM+P+H P S P+R+NV+IS DPQ+VAAR RRER+
Sbjct: 247 ALAQVKEMIYRAAAMRPVHQLVCGAGTEPAPSSQSKPRRKNVRISSDPQTVAARLRRERV 306
Query: 188 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
SER+R+LQRLVPGG++MDTASMLDEA Y+KFLKTQV++LERA
Sbjct: 307 SERLRVLQRLVPGGSRMDTASMLDEAASYLKFLKTQVKALERA 349
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 83/99 (83%), Gaps = 7/99 (7%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSV-------KPPKRRNVKISKDPQSVAARHRRERISE 189
+MA ++E I+R AAM+P+++ P++V + P+R+NV+IS DPQ+VAAR RRER+SE
Sbjct: 250 AMAQVKEMIYRAAAMRPVNLGPEAVGAAGAGAERPRRKNVRISSDPQTVAARLRRERVSE 309
Query: 190 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
R+R+LQ+LVPGG+KMDTASMLDEA Y+KFLK+QVQ+LE
Sbjct: 310 RLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALE 348
>gi|255644404|gb|ACU22707.1| unknown [Glycine max]
Length = 185
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 65/67 (97%)
Query: 136 NSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
NSMAAMRE IFR+A MQP+HIDP+S+KPPKRRNVKISKDPQSVAARHRRERISERI+ILQ
Sbjct: 119 NSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIKILQ 178
Query: 196 RLVPGGT 202
RLVPGGT
Sbjct: 179 RLVPGGT 185
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSV-KPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
+MA ++E I+R AAM+P+H+ ++ P+R+NV+IS DPQ+VAAR RRER+S+R+R+LQ
Sbjct: 247 AMAQVKEMIYRAAAMRPVHLGTEAAADKPRRKNVRISSDPQTVAARLRRERVSDRLRVLQ 306
Query: 196 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+LVPGG KMDTASMLDEA Y+KFLK+QVQ LE
Sbjct: 307 KLVPGGNKMDTASMLDEAASYLKFLKSQVQKLE 339
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSV-KPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
+MA ++E I+R AAM+P+H+ ++ P+R+NV+IS DPQ+VAAR RRER+S+R+R+LQ
Sbjct: 246 AMAQVKEMIYRAAAMRPVHLGTEAAADKPRRKNVRISSDPQTVAARLRRERVSDRLRVLQ 305
Query: 196 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+LVPGG KMDTASMLDEA Y+KFLK+QVQ LE
Sbjct: 306 KLVPGGNKMDTASMLDEAASYLKFLKSQVQKLE 338
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 88/125 (70%), Gaps = 4/125 (3%)
Query: 108 SYSPNERYWRGGAGDSNSSTGVPLSQK----QNSMAAMRETIFRVAAMQPIHIDPDSVKP 163
S P RGG+ + + LS ++A M+E I+R AA +P++ + V+
Sbjct: 210 SKKPRTEKERGGSSNISFQHSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEK 269
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
PKR+NVKIS DPQ+VAAR RRERISE+IR+LQ LVPGGTKMDTASMLDEA +Y+KFL+ Q
Sbjct: 270 PKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQ 329
Query: 224 VQSLE 228
V++LE
Sbjct: 330 VKALE 334
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 88/125 (70%), Gaps = 4/125 (3%)
Query: 108 SYSPNERYWRGGAGDSNSSTGVPLSQK----QNSMAAMRETIFRVAAMQPIHIDPDSVKP 163
S P RGG+ + + LS ++A M+E I+R AA +P++ + V+
Sbjct: 237 SKKPRTEKERGGSSNISFQHSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEK 296
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
PKR+NVKIS DPQ+VAAR RRERISE+IR+LQ LVPGGTKMDTASMLDEA +Y+KFL+ Q
Sbjct: 297 PKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQ 356
Query: 224 VQSLE 228
V++LE
Sbjct: 357 VKALE 361
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 88/125 (70%), Gaps = 4/125 (3%)
Query: 108 SYSPNERYWRGGAGDSNSSTGVPLSQK----QNSMAAMRETIFRVAAMQPIHIDPDSVKP 163
S P RGG+ + + LS ++A M+E I+R AA +P++ + V+
Sbjct: 208 SKKPRTEKERGGSSNISFQHSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEK 267
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
PKR+NVKIS DPQ+VAAR RRERISE+IR+LQ LVPGGTKMDTASMLDEA +Y+KFL+ Q
Sbjct: 268 PKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQ 327
Query: 224 VQSLE 228
V++LE
Sbjct: 328 VKALE 332
>gi|242080237|ref|XP_002444887.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
gi|241941237|gb|EES14382.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
Length = 348
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 94/120 (78%), Gaps = 2/120 (1%)
Query: 135 QNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRIL 194
+ + AM+E ++R+AAMQP+ IDP ++K P+RRNV+IS+DPQSVAARHRRERISERIRIL
Sbjct: 163 EEELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRIL 222
Query: 195 QRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGFPATLTTGNYPPIIG 254
QRLVPGGTKMDTASMLDEAI Y+KFLK QVQ L+ + P +PA+ G ++G
Sbjct: 223 QRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQHQPS--PTQQQYPASAGAGPSTSVVG 280
>gi|242080239|ref|XP_002444888.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
gi|241941238|gb|EES14383.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
Length = 331
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 94/120 (78%), Gaps = 2/120 (1%)
Query: 135 QNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRIL 194
+ + AM+E ++R+AAMQP+ IDP ++K P+RRNV+IS+DPQSVAARHRRERISERIRIL
Sbjct: 146 EEELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRIL 205
Query: 195 QRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGFPATLTTGNYPPIIG 254
QRLVPGGTKMDTASMLDEAI Y+KFLK QVQ L+ + P +PA+ G ++G
Sbjct: 206 QRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQHQPS--PTQQQYPASAGAGPSTSVVG 263
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 87/125 (69%), Gaps = 4/125 (3%)
Query: 108 SYSPNERYWRGGAGDSNSSTGVPLSQK----QNSMAAMRETIFRVAAMQPIHIDPDSVKP 163
S P RGG+ + + LS ++A M+E I+R AA +P++ + V+
Sbjct: 208 SKKPRTEKERGGSSNISFQHSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEK 267
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
PKR+NVKIS DPQ+VAAR RRERISE+IR+LQ LVPGGTKMDTASMLDEA +Y KFL+ Q
Sbjct: 268 PKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYFKFLRAQ 327
Query: 224 VQSLE 228
V++LE
Sbjct: 328 VKALE 332
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 101/158 (63%), Gaps = 8/158 (5%)
Query: 72 HIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPL 131
H V SF + S+++ G ++T +IP+ + P +R G S V L
Sbjct: 278 HAVFQDSFGGCIEASSSA--GFTVTCFDRVTIPS--ATHPPTPPFRQRKGSVGGSPAVDL 333
Query: 132 SQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERI 191
++ A M+ +FR A+ ++ + PKRRNV+IS D QSVAARHRRERIS+RI
Sbjct: 334 ----DNFARMQAILFRQASQLIPTLEDIASSRPKRRNVRISIDTQSVAARHRRERISDRI 389
Query: 192 RILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
R+LQRLVPGGTKMDTASMLDEAIHY+KFLK Q+Q+LE+
Sbjct: 390 RVLQRLVPGGTKMDTASMLDEAIHYIKFLKQQLQTLEQ 427
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 82/104 (78%), Gaps = 10/104 (9%)
Query: 137 SMAAMRETIFRVAAMQPIHI--------DP--DSVKPPKRRNVKISKDPQSVAARHRRER 186
++A ++E I+R AAM+P+H +P S P+RRNV+IS DPQ+VAAR RRER
Sbjct: 242 AIAQVKEMIYRAAAMRPVHQLVCGAAGGEPPSSSQNKPRRRNVRISSDPQTVAARLRRER 301
Query: 187 ISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
+SER+R+LQRLVPGG++MDTASMLDEA Y+KFLK+QV++LERA
Sbjct: 302 VSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKALERA 345
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 82/104 (78%), Gaps = 10/104 (9%)
Query: 137 SMAAMRETIFRVAAMQPIHI--------DP--DSVKPPKRRNVKISKDPQSVAARHRRER 186
++A ++E I+R AAM+P+H +P S P+RRNV+IS DPQ+VAAR RRER
Sbjct: 241 AIAQVKEMIYRAAAMRPVHQLVCGAAGGEPPSSSQNKPRRRNVRISSDPQTVAARLRRER 300
Query: 187 ISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
+SER+R+LQRLVPGG++MDTASMLDEA Y+KFLK+QV++LERA
Sbjct: 301 VSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKALERA 344
>gi|342298424|emb|CBY05402.1| INDEHISCENT-like protein [Lepidium appelianum]
Length = 172
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 79/107 (73%)
Query: 122 DSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAAR 181
D T + L ++ M AM+E + +AAMQP+ IDP +V P RRNV+IS DPQ+ AR
Sbjct: 42 DPTPETLIHLEEEDEDMDAMKEMQYMIAAMQPVDIDPATVPKPYRRNVRISDDPQTGVAR 101
Query: 182 HRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
RRERISE+IRIL+R+VPGG KMD+ASMLDEAI Y KFLK QV+ L+
Sbjct: 102 RRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLKRQVRMLQ 148
>gi|293333080|ref|NP_001168866.1| uncharacterized protein LOC100382671 [Zea mays]
gi|223973413|gb|ACN30894.1| unknown [Zea mays]
Length = 335
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/93 (75%), Positives = 83/93 (89%)
Query: 135 QNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRIL 194
+ + AM+E ++R+AAMQP+ IDP ++K P+RRNV+IS+DPQSVAARHRRERISERIRIL
Sbjct: 148 EEELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRIL 207
Query: 195 QRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
QRLVPGGTKMDTASMLDEAI Y+KFLK QVQ L
Sbjct: 208 QRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 240
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 80/96 (83%), Gaps = 4/96 (4%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDS----VKPPKRRNVKISKDPQSVAARHRRERISERIR 192
+MA ++E I+R AAM+P+ + +S + P+R+NV+IS DPQ+VAAR RRER+S+R+R
Sbjct: 243 AMAQVKEMIYRAAAMRPVSLVTESPAAGISKPRRKNVRISSDPQTVAARLRRERVSDRLR 302
Query: 193 ILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+LQ+LVPGG+KMDTASMLDEA Y+KFLK+QVQ+LE
Sbjct: 303 VLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALE 338
>gi|297810171|ref|XP_002872969.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
gi|297318806|gb|EFH49228.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 72/89 (80%)
Query: 140 AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 199
AM+E + +A MQP+ IDP +V P RRNVKIS DPQ+V AR RRERISE+IRIL+R+VP
Sbjct: 86 AMKEMQYMIAVMQPVDIDPATVPKPNRRNVKISDDPQTVVARRRRERISEKIRILKRIVP 145
Query: 200 GGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
GG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 146 GGAKMDTASMLDEAIRYTKFLKRQVRILQ 174
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 79/92 (85%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
++A M+E I+R AA +P+++ + + PKR+NV+IS DPQ+VAAR RRERIS+RIR+LQ
Sbjct: 170 AIAQMKEMIYRAAAFRPVNLGLEVAEKPKRKNVRISTDPQTVAARQRRERISDRIRVLQG 229
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+VPGG+KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 230 MVPGGSKMDTASMLDEAANYLKFLRSQVKALE 261
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Query: 137 SMAAMRETIFRVAAMQPIHI-DPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
++A ++E I+R AAM+P+ + D+ + P+RRNV+IS DPQ+VAAR RRERISER+R+LQ
Sbjct: 318 ALAQVKEMIYRAAAMRPVSLGSEDAGERPRRRNVRISSDPQTVAARQRRERISERLRVLQ 377
Query: 196 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+LVPGG KMDTASMLDEA +Y++FLK+QV+ L+
Sbjct: 378 KLVPGGAKMDTASMLDEAANYLRFLKSQVRELQ 410
>gi|15236714|ref|NP_191923.1| transcription factor IND [Arabidopsis thaliana]
gi|209572742|sp|O81313.3|IND_ARATH RecName: Full=Transcription factor IND; AltName: Full=Basic
helix-loop-helix protein 40; Short=AtbHLH40; Short=bHLH
40; AltName: Full=Protein INDEHISCENT; AltName:
Full=Transcription factor EN 120; AltName: Full=bHLH
transcription factor bHLH040
gi|3193315|gb|AAC19297.1| contains similarity to transcriptional activator Ra [Arabidopsis
thaliana]
gi|7267099|emb|CAB80770.1| hypothetical protein [Arabidopsis thaliana]
gi|117958473|gb|ABK59672.1| At4g00120 [Arabidopsis thaliana]
gi|332656425|gb|AEE81825.1| transcription factor IND [Arabidopsis thaliana]
Length = 198
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 140 AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 199
AM+E + +A MQP+ IDP +V P RRNV+IS DPQ+V AR RRERISE+IRIL+R+VP
Sbjct: 87 AMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVP 146
Query: 200 GGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
GG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 147 GGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 103/161 (63%), Gaps = 13/161 (8%)
Query: 114 RYWRGGAGDSNSSTGVPLSQKQ------NSMAAMRETIFRVAAMQPIHID--PDSVKPPK 165
R+ +G SN + P S ++A M+E I+R AA +P+ + + + PK
Sbjct: 326 RWEKGSCSSSNINFQQPNSSSSIEEPDPEAIAQMKEMIYRAAAFRPVSLLGLEEVAEKPK 385
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R+NVKIS DPQ+VAAR RRERIS+RIR+LQ++VPGG+KMDTASMLDEA +Y+KFL++QV+
Sbjct: 386 RKNVKISSDPQTVAARQRRERISDRIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVK 445
Query: 226 SLERAAANRPAGIGF--PATLTTG---NYPPIIGKEYQQPA 261
+LE + + P+++ ++P + +YQ P+
Sbjct: 446 ALESLGNKVSTAMDYCSPSSIAFSFNPSFPMQMKDDYQLPS 486
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Query: 137 SMAAMRETIFRVAAMQPIHIDP-DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
++A ++E I+R AAM+P+ + D+ + P+RRNV+IS DPQ+VAAR RRERISER+R+LQ
Sbjct: 331 ALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERISERLRVLQ 390
Query: 196 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+LVPGG KMDTASMLDEA +Y++FLK+Q++ L+
Sbjct: 391 KLVPGGAKMDTASMLDEAANYLRFLKSQIRELQ 423
>gi|297725985|ref|NP_001175356.1| Os08g0108500 [Oryza sativa Japonica Group]
gi|255678100|dbj|BAH94084.1| Os08g0108500 [Oryza sativa Japonica Group]
Length = 306
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 82/92 (89%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
+ AM+E ++R+AAMQP+ IDP ++K P+RRNV+IS DPQSVAARHRRERISERIRILQR
Sbjct: 129 ELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQR 188
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
LVPGGTKMDTASMLDEAI Y+KFLK QVQ L+
Sbjct: 189 LVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 220
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 79/95 (83%), Gaps = 2/95 (2%)
Query: 136 NSMAAMRETIFRVAAMQPIHI--DPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRI 193
++A ++E I+R AAM+P+ + + D+ + P+RRNV+IS DPQ+VAAR RRERISER+R+
Sbjct: 283 EALAQVKEMIYRAAAMRPVSLGSEEDAGERPRRRNVRISSDPQTVAARQRRERISERLRV 342
Query: 194 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
LQ+LVPGG KMDTASMLDEA Y++FL++QV+ L+
Sbjct: 343 LQKLVPGGAKMDTASMLDEAASYLRFLQSQVRELQ 377
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Query: 137 SMAAMRETIFRVAAMQPIHIDP-DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
++A ++E I+R AAM+P+ + D+ + P+RRNV+IS DPQ+VAAR RRERISER+R+LQ
Sbjct: 347 ALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERISERLRVLQ 406
Query: 196 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+LVPGG KMDTASMLDEA +Y++FLK+Q++ L+
Sbjct: 407 KLVPGGAKMDTASMLDEAANYLRFLKSQIRELQ 439
>gi|125601936|gb|EAZ41261.1| hypothetical protein OsJ_25770 [Oryza sativa Japonica Group]
Length = 303
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 82/92 (89%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
+ AM+E ++R+AAMQP+ IDP ++K P+RRNV+IS DPQSVAARHRRERISERIRILQR
Sbjct: 126 ELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQR 185
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
LVPGGTKMDTASMLDEAI Y+KFLK QVQ L+
Sbjct: 186 LVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 217
>gi|125559887|gb|EAZ05335.1| hypothetical protein OsI_27539 [Oryza sativa Indica Group]
Length = 303
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 82/92 (89%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
+ AM+E ++R+AAMQP+ IDP ++K P+RRNV+IS DPQSVAARHRRERISERIRILQR
Sbjct: 126 ELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQR 185
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
LVPGGTKMDTASMLDEAI Y+KFLK QVQ L+
Sbjct: 186 LVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 217
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/66 (84%), Positives = 63/66 (95%)
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
PKRRNV+ISKDPQSVAARHRRERIS+R+R+LQ VPGGTKMDTASMLDEAIHYVKFL+ Q
Sbjct: 381 PKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQQ 440
Query: 224 VQSLER 229
+Q+LER
Sbjct: 441 LQTLER 446
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Query: 137 SMAAMRETIFRVAAMQPIHIDP-DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
++A ++E I+R AAM+P+ + D+ + P+RRNV+IS DPQ+VAAR RRERISER+R+LQ
Sbjct: 335 ALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERISERLRVLQ 394
Query: 196 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+LVPGG KMDTASMLDEA +Y++FLK+Q++ L+
Sbjct: 395 KLVPGGAKMDTASMLDEAANYLRFLKSQIRELQ 427
>gi|357158743|ref|XP_003578226.1| PREDICTED: uncharacterized protein LOC100844721 [Brachypodium
distachyon]
Length = 247
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 139/255 (54%), Gaps = 61/255 (23%)
Query: 1 MEFDRLKSAATEDQMEMMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIAS 60
M+FD L S++ E Q+ +M M+Q+++ A I S +AS
Sbjct: 1 MDFDLLLSSSPEAQLALMNTMLQLEQ-----------------------ALIADQSPMAS 37
Query: 61 STPHFVDNNSPHI--VSSPSFSNMLSN----SNTSLNGTSITAAQGTSIPTYFSY----- 109
S VD +SP I V +P S+ LS S+ S T +A + YFS
Sbjct: 38 S----VDTSSPPISPVQTPPHSHSLSPPPHVSSLSCTTTDASAIGYNNQDMYFSMPVAYG 93
Query: 110 --------SPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPD-- 159
+ Y+ G + P +++ AMRE IF +AA+QP+ D D
Sbjct: 94 GAGIGIGIGAQQEYYMPPGG----TRAAPQPPQRD---AMREMIFHIAALQPVMNDDDDV 146
Query: 160 ----SVKPPK--RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 213
+V+P K RRNV+ SKDPQSVAAR RRERISERIR+LQRLVPGGTKMDTASMLDEA
Sbjct: 147 EAAGAVRPAKKQRRNVRTSKDPQSVAARLRRERISERIRVLQRLVPGGTKMDTASMLDEA 206
Query: 214 IHYVKFLKTQVQSLE 228
IHYVKFLK+QVQSLE
Sbjct: 207 IHYVKFLKSQVQSLE 221
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 78/97 (80%), Gaps = 5/97 (5%)
Query: 137 SMAAMRETIFRVAAMQPIHI-----DPDSVKPPKRRNVKISKDPQSVAARHRRERISERI 191
+MA ++E I+R AAM+P+ + + P+R+NV+IS DPQ+VAAR RRER+S+R+
Sbjct: 245 AMAQVKEMIYRAAAMRPVSLVTAEAGAAASAKPRRKNVRISSDPQTVAARLRRERVSDRL 304
Query: 192 RILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
R+LQ+LVPGG+KMDTASMLDEA Y+KFL++QVQ+LE
Sbjct: 305 RVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQALE 341
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Query: 137 SMAAMRETIFRVAAMQPIHIDP-DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
++A ++E I+R AAM+P+ + D+ + P+RRNV+IS DPQ+VAAR RRERISER+R+LQ
Sbjct: 335 AIAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERISERLRVLQ 394
Query: 196 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+LVPGG KMDTASMLDEA +Y++FLK+Q++ L+
Sbjct: 395 KLVPGGAKMDTASMLDEAANYLRFLKSQIRELQ 427
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 79/99 (79%), Gaps = 6/99 (6%)
Query: 136 NSMAAMRETIFRVAAMQPIHIDPD------SVKPPKRRNVKISKDPQSVAARHRRERISE 189
++A ++E I+R AAM+P+ + + + +PP+RRNV+IS DPQ+VAAR RRERIS+
Sbjct: 331 EALAQVKEMIYRAAAMRPVSLGSEDDAGAGAERPPRRRNVRISSDPQTVAARQRRERISD 390
Query: 190 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
R+R+LQ+LVPGG KMDTASMLDEA Y++FLK+QV+ L+
Sbjct: 391 RLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRDLQ 429
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 2/87 (2%)
Query: 140 AMRETIFRVAAMQPI-HIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLV 198
++R +FR A+ QPI ++ + PKRRNV+ISKDPQSVAARHRRERIS+RIR+LQRLV
Sbjct: 1 SVRAILFRHAS-QPIPTLEEIASSRPKRRNVRISKDPQSVAARHRRERISDRIRVLQRLV 59
Query: 199 PGGTKMDTASMLDEAIHYVKFLKTQVQ 225
PGGTKMDTASMLDEAIHYVKFLK Q+Q
Sbjct: 60 PGGTKMDTASMLDEAIHYVKFLKLQLQ 86
>gi|237692500|gb|ACR15952.1| INDEHISCENT [Lepidium campestre]
gi|342298436|emb|CBY05408.1| INDEHISCENT-like protein [Lepidium campestre]
Length = 176
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 71/87 (81%)
Query: 142 RETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGG 201
+E + +AAMQP+ IDP +V P RRNV+IS DPQ+V AR RRERISE+IRIL+R+VPGG
Sbjct: 66 KEMQYMIAAMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPGG 125
Query: 202 TKMDTASMLDEAIHYVKFLKTQVQSLE 228
KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 126 AKMDTASMLDEAIRYTKFLKRQVRILQ 152
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 75/99 (75%), Gaps = 7/99 (7%)
Query: 137 SMAAMRETIFRVAAMQPIHI-------DPDSVKPPKRRNVKISKDPQSVAARHRRERISE 189
++A ++E I+R AAM+P+ + D + P RRNV+IS DPQ+VAAR RRERISE
Sbjct: 297 ALAQVKEMIYRAAAMRPVTLGCNGGDEDTERAPAPGRRNVRISSDPQTVAARQRRERISE 356
Query: 190 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
R+R+LQRLVPGG KMDTASMLDEA Y++FLK Q++ L+
Sbjct: 357 RLRVLQRLVPGGAKMDTASMLDEAASYLRFLKAQIRDLQ 395
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 80/104 (76%), Gaps = 12/104 (11%)
Query: 137 SMAAMRETIFRVAAMQPIHI-------DPDSVKP-----PKRRNVKISKDPQSVAARHRR 184
++A ++E I+R AAM+P+ + DP P P+R+NV+IS DPQ+VAAR RR
Sbjct: 229 AIAQVKEMIYRAAAMRPVTLGGAASASDPSFAAPQPPQRPRRKNVRISSDPQTVAARLRR 288
Query: 185 ERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
ER+SER+R+LQRLVPGG+KMDTA+MLDEA Y+KFLK+Q+++LE
Sbjct: 289 ERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 332
>gi|288901043|gb|ADC68234.1| bHLH transcription factor [Brassica oleracea]
Length = 180
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 70/83 (84%)
Query: 146 FRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMD 205
+ +AAMQP+ IDP +V P RRNV++S+DPQ+V AR RRERISE+IRIL+R+VPGG KMD
Sbjct: 75 YAIAAMQPVDIDPATVPKPNRRNVRVSEDPQTVVARRRRERISEKIRILKRMVPGGAKMD 134
Query: 206 TASMLDEAIHYVKFLKTQVQSLE 228
TASMLDEAI Y KFLK QV+ L+
Sbjct: 135 TASMLDEAIRYTKFLKRQVRLLQ 157
>gi|219363295|ref|NP_001136892.1| uncharacterized protein LOC100217048 [Zea mays]
gi|194697492|gb|ACF82830.1| unknown [Zea mays]
gi|414589607|tpg|DAA40178.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 92/121 (76%), Gaps = 8/121 (6%)
Query: 122 DSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIH------IDPDSV--KPPKRRNVKISK 173
D + P S S AMRE IFR+AA+QP+ +P++ + PKRRNV++SK
Sbjct: 107 DGGALQAGPSSAAAASADAMREAIFRIAALQPVEDQTTTGPEPEAAVRRAPKRRNVRVSK 166
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
DPQSVAAR RRERISERIR LQRLVPGGTKMDTASMLDEAI YVKFLK+Q+QSL+RAAA+
Sbjct: 167 DPQSVAARLRRERISERIRALQRLVPGGTKMDTASMLDEAIQYVKFLKSQLQSLQRAAAS 226
Query: 234 R 234
R
Sbjct: 227 R 227
>gi|288901045|gb|ADC68235.1| bHLH transcription factor [Brassica rapa subsp. pekinensis]
Length = 171
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 71/88 (80%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
M M++ + +AAMQP+ +DP +V P RRNV++S DPQ+V AR RRERISE+IRIL+R+
Sbjct: 70 MDPMKKMQYAIAAMQPVDLDPATVPKPNRRNVRVSDDPQTVVARRRRERISEKIRILKRM 129
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
VPGG KMDTASMLDEAI Y KFLK QV+
Sbjct: 130 VPGGAKMDTASMLDEAIRYTKFLKRQVR 157
>gi|15242494|ref|NP_196537.1| transcription factor HEC3 [Arabidopsis thaliana]
gi|75311668|sp|Q9LXD8.1|HEC3_ARATH RecName: Full=Transcription factor HEC3; AltName: Full=Basic
helix-loop-helix protein 43; Short=AtbHLH43; Short=bHLH
43; AltName: Full=Protein HECATE 3; AltName:
Full=Transcription factor EN 119; AltName: Full=bHLH
transcription factor bHLH043
gi|7671414|emb|CAB89355.1| putative protein [Arabidopsis thaliana]
gi|9759006|dbj|BAB09533.1| unnamed protein product [Arabidopsis thaliana]
gi|332004059|gb|AED91442.1| transcription factor HEC3 [Arabidopsis thaliana]
Length = 224
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 81/98 (82%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++++AAMQ + IDP +VK PKRRNV+IS DPQSVAARHRRERISERIRILQRL
Sbjct: 92 LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
VPGGTKMDTASMLDEAI YVKFLK Q++ L P
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTP 189
>gi|297811073|ref|XP_002873420.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
gi|297319257|gb|EFH49679.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/89 (77%), Positives = 79/89 (88%)
Query: 139 AAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLV 198
AM+E ++++AAMQ + IDP +VK PKRRNV+IS DPQSVAARHRRERISERIRILQRLV
Sbjct: 86 GAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLV 145
Query: 199 PGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
PGGTKMDTASMLDEAI YVKFLK Q++ L
Sbjct: 146 PGGTKMDTASMLDEAIRYVKFLKRQIRLL 174
>gi|342298444|emb|CBY05412.1| INDEHISCENT-like protein [Aethionema carneum]
Length = 176
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 70/87 (80%)
Query: 142 RETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGG 201
+E + +AAMQP+ IDP +V P RRNV+IS DPQ+V A RRERISE+IRIL+R+VPGG
Sbjct: 66 KEMQYMIAAMQPVDIDPATVPKPYRRNVRISDDPQTVVAXRRRERISEKIRILKRIVPGG 125
Query: 202 TKMDTASMLDEAIHYVKFLKTQVQSLE 228
KMD+ASMLDEAI Y KFLK QV+ L+
Sbjct: 126 AKMDSASMLDEAIRYTKFLKRQVRMLQ 152
>gi|449458249|ref|XP_004146860.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 75/91 (82%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
++ M+E I+ A +P+++ ++V+ +R+NVK+SK+PQ+VAAR RRE+ISE+IR+LQRL
Sbjct: 155 VSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRL 214
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGG+KMD SMLDEA Y+KFL+ Q+++LE
Sbjct: 215 VPGGSKMDIGSMLDEAASYLKFLRAQIKALE 245
>gi|449476926|ref|XP_004154878.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 75/91 (82%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
++ M+E I+ A +P+++ ++V+ +R+NVK+SK+PQ+VAAR RRE+ISE+IR+LQRL
Sbjct: 155 VSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRL 214
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
VPGG+KMD SMLDEA Y+KFL+ Q+++LE
Sbjct: 215 VPGGSKMDIGSMLDEAASYLKFLRAQIKALE 245
>gi|359482873|ref|XP_003632856.1| PREDICTED: transcription factor bHLH87-like [Vitis vinifera]
Length = 471
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 80/92 (86%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
++A M+E I+R AA +P++ D+V+ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 334 AIAQMKEIIYRAAAFRPVNFGMDAVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 393
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
LVPGG KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 394 LVPGGNKMDTASMLDEAANYLKFLRSQVKALE 425
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 74/100 (74%), Gaps = 13/100 (13%)
Query: 136 NSMAAMRETIFRVAAMQPI------------HIDPDSVKPPKRRNVKISKDPQSVAARHR 183
++A ++E I+R AAM+P+ H +P KP +R+NV+IS DPQ+VAAR R
Sbjct: 254 EAIAQVKEMIYRAAAMRPLPSLTGASAGDPTH-EPSPSKPRRRKNVRISSDPQTVAARLR 312
Query: 184 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
RE++SER+R LQRLVPGG+KMDTASMLDEA Y+KFLK+Q
Sbjct: 313 REKVSERLRALQRLVPGGSKMDTASMLDEAASYLKFLKSQ 352
>gi|147797615|emb|CAN65002.1| hypothetical protein VITISV_023488 [Vitis vinifera]
Length = 447
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 80/92 (86%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
++A M+E I+R AA +P++ D+V+ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 310 AIAQMKEIIYRAAAFRPVNFGMDAVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 369
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
LVPGG KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 370 LVPGGNKMDTASMLDEAANYLKFLRSQVKALE 401
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 79/104 (75%), Gaps = 12/104 (11%)
Query: 137 SMAAMRETIFRVAAMQPIHID------------PDSVKPPKRRNVKISKDPQSVAARHRR 184
++A ++E I+R AAM+P+ + P + P+R+NV+IS DPQ+VAAR RR
Sbjct: 185 AIAQVKEMIYRAAAMRPVTLGGAASASDPSSAAPPPPQRPRRKNVRISSDPQTVAARLRR 244
Query: 185 ERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
ER+SER+R+LQRLVPGG+KMDTA+MLDEA Y+KFLK+Q+++LE
Sbjct: 245 ERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 288
>gi|449448090|ref|XP_004141799.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 393
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 81/92 (88%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
++A M+E I+R AA +P+++ + ++ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 252 AIAQMKEMIYRAAAFRPVNLGLEMIEKPKRKNVRISSDPQTVAARQRRERISERIRVLQR 311
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
LVPGG+KMDTASMLDEA +Y+KFLK+Q+++LE
Sbjct: 312 LVPGGSKMDTASMLDEAANYLKFLKSQIKALE 343
>gi|255549698|ref|XP_002515900.1| DNA binding protein, putative [Ricinus communis]
gi|223544805|gb|EEF46320.1| DNA binding protein, putative [Ricinus communis]
Length = 395
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 81/92 (88%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
++A M+E I+R AA +P+++ + V+ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 256 AIAQMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 315
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
LVPGG+KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 316 LVPGGSKMDTASMLDEAANYLKFLRSQVKALE 347
>gi|168017686|ref|XP_001761378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687384|gb|EDQ73767.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 54/56 (96%)
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
PKRRNV+ISKDPQSVAARHRRERIS+R+R+LQ VPGGTKMDTASMLDEAIHYVKF
Sbjct: 361 PKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 416
>gi|168042091|ref|XP_001773523.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675225|gb|EDQ61723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 706
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
PKRRNV+IS DPQSVAARHRRERIS+R+R+LQ VPGGTKMDTASMLDEAIHYVKF
Sbjct: 503 PKRRNVRISSDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 558
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/56 (91%), Positives = 55/56 (98%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+ISKDPQSVAARHRRERIS+RIR+LQRLVPGGTKMDTASMLDEAIHYVKFLK Q+Q
Sbjct: 1 RISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQ 56
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 78/104 (75%), Gaps = 12/104 (11%)
Query: 137 SMAAMRETIFRVAAMQPIHID------------PDSVKPPKRRNVKISKDPQSVAARHRR 184
++A ++E ++R A M+P+ + P + P+R+NV+IS DPQ+VAAR RR
Sbjct: 255 AIAQVKEMVYRAAPMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLRR 314
Query: 185 ERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
ER+SER+R+LQRLVPGG+KMDTA+MLDEA Y+KFLK+Q+++LE
Sbjct: 315 ERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 358
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 78/104 (75%), Gaps = 12/104 (11%)
Query: 137 SMAAMRETIFRVAAMQPIHID------------PDSVKPPKRRNVKISKDPQSVAARHRR 184
++A ++E ++R A M+P+ + P + P+R+NV+IS DPQ+VAAR RR
Sbjct: 257 AIAQVKEMVYRAAPMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLRR 316
Query: 185 ERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
ER+SER+R+LQRLVPGG+KMDTA+MLDEA Y+KFLK+Q+++LE
Sbjct: 317 ERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 360
>gi|357454723|ref|XP_003597642.1| Transcription factor bHLH87 [Medicago truncatula]
gi|355486690|gb|AES67893.1| Transcription factor bHLH87 [Medicago truncatula]
Length = 392
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 80/93 (86%), Gaps = 1/93 (1%)
Query: 137 SMAAMRETIFRVAAMQPI-HIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
++A M+E I+R AA +P+ ++ + ++ PKR+NVKISKDPQ+VAAR RRERISERIR+LQ
Sbjct: 261 AIAQMKEMIYRAAAFRPVTNLGLEVMEKPKRKNVKISKDPQTVAARQRRERISERIRVLQ 320
Query: 196 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
++VPGGTKMDTASMLDEA +Y+KFL+ QV+ LE
Sbjct: 321 KIVPGGTKMDTASMLDEAANYLKFLRAQVKELE 353
>gi|449480726|ref|XP_004155978.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH87-like
[Cucumis sativus]
Length = 383
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 77/92 (83%)
Query: 137 SMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 196
++A M+E I+R AA +P+++ + ++ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 252 AIAQMKEMIYRAAAFRPVNLGLEMIEKPKRKNVRISSDPQTVAARQRRERISERIRVLQR 311
Query: 197 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
LVPGG+KMDTASMLDEA K LK+Q+++LE
Sbjct: 312 LVPGGSKMDTASMLDEAAXLSKVLKSQIKALE 343
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 56/62 (90%)
Query: 167 RNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQS 226
RNV+IS DPQ+VAAR RRERIS+R+R+LQ+LVPGG KMDTASMLDEA Y++FLK+QV+
Sbjct: 314 RNVRISSDPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRD 373
Query: 227 LE 228
L+
Sbjct: 374 LQ 375
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 55/62 (88%)
Query: 171 ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
+S +PQSVAAR RRER+S+R+R LQRLVPGG ++DTASML+EAI YVKFLK VQSLERA
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLERA 179
Query: 231 AA 232
AA
Sbjct: 180 AA 181
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
S +PQSVAARHRR++ISERIR+L++L+PGG KMDTA+MLDEAI YVKFL+ QVQ LE
Sbjct: 387 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQILESDT 446
Query: 232 ANRPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGALHYG 270
+ P T + G P+ G +Q R G G
Sbjct: 447 LD-----NAPLTASNGQNLPLQGSRAKQGLKRKGDTSLG 480
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/56 (82%), Positives = 50/56 (89%)
Query: 169 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
VK+S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAIHYVKFLKTQ+
Sbjct: 46 VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 101
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 55/62 (88%)
Query: 171 ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
+S +PQSVAAR RRER+S+R+R LQRLVPGG ++DTASML+EAI YVKFLK VQSLERA
Sbjct: 121 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLERA 180
Query: 231 AA 232
AA
Sbjct: 181 AA 182
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 53/60 (88%)
Query: 169 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
V S +PQSVAARHRR++ISERIR+L++L+PGG KMDTA+MLDEAI YVKFL+ QVQ LE
Sbjct: 12 VATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQILE 71
>gi|224091579|ref|XP_002334947.1| predicted protein [Populus trichocarpa]
gi|222875273|gb|EEF12404.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 50/56 (89%)
Query: 169 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
VK+S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SML+EAI+YVKFLKTQV
Sbjct: 35 VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKTQV 90
>gi|227016421|gb|ACP18672.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 52/70 (74%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 111
Query: 230 AAANRPAGIG 239
A G G
Sbjct: 112 ALVQHEEGCG 121
>gi|227016419|gb|ACP18671.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 52/70 (74%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 111
Query: 230 AAANRPAGIG 239
A G G
Sbjct: 112 ALVQHEEGCG 121
>gi|162459126|ref|NP_001105271.1| barren stalk1 [Zea mays]
gi|56384213|gb|AAV85767.1| barren stalk1 [Zea mays]
gi|56384215|gb|AAV85768.1| barren stalk1 [Zea mays]
gi|223946525|gb|ACN27346.1| unknown [Zea mays]
gi|414879869|tpg|DAA57000.1| TPA: barren stalk1 [Zea mays]
Length = 219
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 54/62 (87%), Gaps = 1/62 (1%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLKTQ+ SL +
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQI-SLHQ 109
Query: 230 AA 231
AA
Sbjct: 110 AA 111
>gi|357131240|ref|XP_003567247.1| PREDICTED: transcription factor LAX PANICLE-like [Brachypodium
distachyon]
Length = 228
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 165 KRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+R K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV
Sbjct: 55 RRPGTKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 114
Query: 225 QSLERAA 231
+L +AA
Sbjct: 115 -TLHQAA 120
>gi|147838921|emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinifera]
gi|297735648|emb|CBI18142.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 48/54 (88%)
Query: 171 ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SML+EAIHYVK+LKTQ+
Sbjct: 36 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKYLKTQI 89
>gi|227016424|gb|ACP18673.1| barren stalk1-like protein [Leymus triticoides]
Length = 158
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 52/70 (74%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 110
Query: 230 AAANRPAGIG 239
A G G
Sbjct: 111 ALVQHEEGCG 120
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 169 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
VK+S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SML+EAI+YVKFLK Q+
Sbjct: 35 VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKNQI 90
>gi|227016415|gb|ACP18669.1| barren stalk1-like protein [Leymus cinereus]
Length = 149
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 52/70 (74%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 111
Query: 230 AAANRPAGIG 239
A G G
Sbjct: 112 ALVQHEEGCG 121
>gi|242059137|ref|XP_002458714.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
gi|241930689|gb|EES03834.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
Length = 232
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Query: 168 NVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK Q+ SL
Sbjct: 54 GAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI-SL 112
Query: 228 ERAA 231
+AA
Sbjct: 113 HQAA 116
>gi|62466473|gb|AAX83562.1| LAX [Oryza barthii]
gi|62466475|gb|AAX83563.1| LAX [Oryza meridionalis]
gi|62466477|gb|AAX83564.1| LAX [Oryza longistaminata]
gi|62466479|gb|AAX83565.1| LAX [Oryza glumipatula]
gi|62466481|gb|AAX83566.1| LAX [Oryza nivara]
gi|62466483|gb|AAX83567.1| LAX [Oryza rufipogon]
gi|62466485|gb|AAX83568.1| LAX [Oryza sativa Japonica Group]
gi|62466487|gb|AAX83569.1| LAX [Oryza sativa Japonica Group]
gi|62466489|gb|AAX83570.1| LAX [Oryza sativa Japonica Group]
gi|62466493|gb|AAX83572.1| LAX [Oryza sativa Japonica Group]
gi|62466495|gb|AAX83573.1| LAX [Oryza sativa Indica Group]
gi|62466497|gb|AAX83574.1| LAX [Oryza sativa Indica Group]
gi|62466501|gb|AAX83576.1| LAX [Oryza sativa Indica Group]
gi|62466511|gb|AAX83581.1| LAX [Oryza sativa Indica Group]
gi|62466517|gb|AAX83584.1| LAX [Oryza rufipogon]
Length = 189
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +L +
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLHQ 81
Query: 230 AA 231
AA
Sbjct: 82 AA 83
>gi|62466521|gb|AAX83586.1| LAX [Oryza rufipogon]
Length = 190
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +L +
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLHQ 81
Query: 230 AA 231
AA
Sbjct: 82 AA 83
>gi|62466519|gb|AAX83585.1| LAX [Oryza rufipogon]
Length = 189
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +L +
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLHQ 81
Query: 230 AA 231
AA
Sbjct: 82 AA 83
>gi|115440839|ref|NP_001044699.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|68565366|sp|Q7XAQ6.1|LAX_ORYSJ RecName: Full=Transcription factor LAX PANICLE
gi|33342172|dbj|BAC80247.1| transcription factor [Oryza sativa Japonica Group]
gi|56785174|dbj|BAD81850.1| transcription factor [Oryza sativa Japonica Group]
gi|113534230|dbj|BAF06613.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|342674132|gb|AEL31274.1| LAX protein [Oryza sativa Japonica Group]
Length = 215
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +L +
Sbjct: 39 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLHQ 97
Query: 230 AA 231
AA
Sbjct: 98 AA 99
>gi|62466491|gb|AAX83571.1| LAX [Oryza sativa Japonica Group]
gi|62466499|gb|AAX83575.1| LAX [Oryza sativa Indica Group]
gi|62466503|gb|AAX83577.1| LAX [Oryza sativa Indica Group]
gi|62466505|gb|AAX83578.1| LAX [Oryza sativa Indica Group]
gi|62466507|gb|AAX83579.1| LAX [Oryza sativa Indica Group]
gi|62466509|gb|AAX83580.1| LAX [Oryza sativa Indica Group]
gi|62466513|gb|AAX83582.1| LAX [Oryza rufipogon]
gi|62466515|gb|AAX83583.1| LAX [Oryza rufipogon]
Length = 189
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +L +
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLHQ 81
Query: 230 AA 231
AA
Sbjct: 82 AA 83
>gi|62466523|gb|AAX83587.1| LAX [Oryza rufipogon]
Length = 189
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +L +
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLHQ 81
Query: 230 AA 231
AA
Sbjct: 82 AA 83
>gi|326527333|dbj|BAK04608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMD SML++AIHYVKFLK QV SL +
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDNVSMLEQAIHYVKFLKAQV-SLHQ 110
Query: 230 A 230
A
Sbjct: 111 A 111
>gi|125528258|gb|EAY76372.1| hypothetical protein OsI_04303 [Oryza sativa Indica Group]
Length = 223
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KM+T SML++AIHYVKFLK QV +L +
Sbjct: 47 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMETVSMLEQAIHYVKFLKAQV-TLHQ 105
Query: 230 AA 231
AA
Sbjct: 106 AA 107
>gi|357506069|ref|XP_003623323.1| LAX [Medicago truncatula]
gi|355498338|gb|AES79541.1| LAX [Medicago truncatula]
Length = 153
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 171 ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
+S DPQSVAAR RR RIS+R +ILQ ++PGG+K+DT SML+EAIHYVKFLK Q+ L
Sbjct: 32 LSTDPQSVAARERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLKKQIW-LHET 90
Query: 231 AANRPAGIGFPATLTTGNY 249
N IG L +Y
Sbjct: 91 LINFVDDIGESHMLLPQDY 109
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 51/59 (86%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
K + +PQS+AAR RR++ISER+R L++LVPGG K+DTASMLDEAI +VKFL+ QVQ LE
Sbjct: 383 KETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLE 441
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 51/59 (86%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
K + +PQS+AAR RR++ISER+R L++LVPGG K+DTASMLDEAI +VKFL+ QVQ LE
Sbjct: 383 KETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLE 441
>gi|297810265|ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318853|gb|EFH49275.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 898
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 171 ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+S DPQSVAAR RR RISER +ILQ +VPGG KMDT SML+EAI YVKFLK Q+
Sbjct: 43 LSTDPQSVAARERRHRISERFKILQSMVPGGAKMDTVSMLEEAIRYVKFLKAQI 96
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DPQS+ AR RRERI+ER+RILQ+LVP GTK+D ++ML+EA+HYVKFL+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 222 TQVQSL 227
Q++ L
Sbjct: 294 LQIKLL 299
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 171 ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+S DPQSVAAR RR RIS+R +ILQ +VPGG KMDT SMLDEAI YVKFLK Q+
Sbjct: 43 LSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQI 96
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
S KP R + DPQS+ AR RRERI+ER+RILQ+LVP GTK+D ++ML+EA+HYVKF
Sbjct: 232 SPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKF 291
Query: 220 LKTQVQSL 227
L+ Q++ L
Sbjct: 292 LQLQIKLL 299
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 150 AMQPIHIDPDS-VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTAS 208
+MQ + DS K PK ++ +KDPQS+AA++RRERISER+++LQ LVP G+K+D +
Sbjct: 211 SMQALKKQRDSATKKPKPKSAGPAKDPQSIAAKNRRERISERLKMLQDLVPNGSKVDLVT 270
Query: 209 MLDEAIHYVKFLKTQVQSL 227
ML++AI YVKFL+ QV+ L
Sbjct: 271 MLEKAISYVKFLQLQVKVL 289
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP +R + DPQSV ARHRRE+I+ER++ LQ LVP G K+D +MLDEAIHYVKFL+
Sbjct: 441 KPRAKRGS--ATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQ 498
Query: 222 TQVQSLE 228
TQV+ L+
Sbjct: 499 TQVELLK 505
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 48/54 (88%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ+LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 246 DPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 299
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 49/56 (87%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+KDPQS+AA++RRERISER+RILQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 188 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 243
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 49/56 (87%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+KDPQS+AA++RRERISER+RILQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 204 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 259
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 49/56 (87%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+KDPQS+AA++RRERISER+RILQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 204 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 259
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 49/56 (87%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+KDPQS+AA++RRERISER+RILQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 206 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 261
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 216 DPQSIYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 269
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 144 TIFRVAAMQPIHIDP---DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPG 200
+I AM+ I P + KP RR + DPQSV ARHRRE+I+ER++ LQ LVP
Sbjct: 420 SILTSQAMEIYAIGPALNTNGKPRARRGS--ATDPQSVYARHRREKINERLKTLQHLVPN 477
Query: 201 GTKMDTASMLDEAIHYVKFLKTQVQSLE 228
G K+D +MLDEAIHYV+FL+ QV L+
Sbjct: 478 GAKVDIVTMLDEAIHYVQFLQLQVTLLK 505
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 274 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 327
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 272 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 325
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%)
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+ N SKDPQSVAA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+
Sbjct: 240 KHNSSPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVK 299
Query: 226 SL 227
L
Sbjct: 300 VL 301
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P S K R N + DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YV
Sbjct: 180 PSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 239
Query: 218 KFLKTQVQSL 227
KFL+ Q++ L
Sbjct: 240 KFLQLQIKLL 249
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P S K R N + DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YV
Sbjct: 180 PSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 239
Query: 218 KFLKTQVQSL 227
KFL+ Q++ L
Sbjct: 240 KFLQLQIKLL 249
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 49/56 (87%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
SKDPQSVAA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 246 SKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 301
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 48/55 (87%)
Query: 173 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
KDPQSVAA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 210 KDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 264
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 17/112 (15%)
Query: 116 WRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDP 175
WR G SN ++ S +N++ + T S+K + N I+ DP
Sbjct: 101 WRDGQSLSNYNS----SDDENALGLVSNT-------------SKSLKRKAKSNKGIASDP 143
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
QS+ AR RRERI++R++ LQ LVP GTK+D ++ML++A+HYVKFL+ Q++ L
Sbjct: 144 QSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLL 195
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 296 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 349
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 296 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 349
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 49/56 (87%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
SKDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 232 SKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 287
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 102 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 155
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
Query: 160 SVKPPKRRNVKIS-------KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 212
S KP N KI KDPQS+AA++RRERISER+++LQ LVP GTK+D +ML++
Sbjct: 189 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 248
Query: 213 AIHYVKFLKTQVQSL 227
AI YVKFL+ QV+ L
Sbjct: 249 AIGYVKFLQVQVKVL 263
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 58/86 (67%), Gaps = 12/86 (13%)
Query: 154 IHIDPDSVKPPK-----RRNVKI-------SKDPQSVAARHRRERISERIRILQRLVPGG 201
+ +P +V P K R+ K +KDPQS+AA++RRERISER+R LQ LVP G
Sbjct: 184 VSAEPQAVSPKKHCGAGRKASKAKSPSTTPTKDPQSLAAKNRRERISERLRTLQELVPNG 243
Query: 202 TKMDTASMLDEAIHYVKFLKTQVQSL 227
TK+D +ML++AI YVKFL+ QV+ L
Sbjct: 244 TKVDLVTMLEKAISYVKFLQLQVKVL 269
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 44/54 (81%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQSV ARHRRERI+ER++ LQ LVP G K+D +ML+EAIHYVKFL+ QV L
Sbjct: 220 DPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQLQVNML 273
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/57 (66%), Positives = 48/57 (84%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+ DPQSV ARHRRE+I+ER++ LQ LVP G K+D +MLDEAIHYVKFL+TQV+ L+
Sbjct: 3 ATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELLK 59
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
Query: 160 SVKPPKRRNVKIS-------KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 212
S KP N KI KDPQS+AA++RRERISER+++LQ LVP GTK+D +ML++
Sbjct: 121 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 180
Query: 213 AIHYVKFLKTQVQSL 227
AI YVKFL+ QV+ L
Sbjct: 181 AIGYVKFLQVQVKVL 195
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%), Gaps = 11/80 (13%)
Query: 159 DSVKPPKRRNVKIS-----------KDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 207
+S +P K+ N ++ KDPQS+AA++RRERISER++ILQ LVP GTK+D
Sbjct: 176 ESTQPSKKPNSGVTGKAKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLV 235
Query: 208 SMLDEAIHYVKFLKTQVQSL 227
+ML++AI YVKFL+ QV+ L
Sbjct: 236 TMLEKAISYVKFLQVQVKVL 255
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 173 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
KDPQS+AA++RRERISER+++LQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 209 KDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 263
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 48/55 (87%)
Query: 173 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
KDPQS+AA++RRERISER++ILQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 203 KDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVL 257
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 2/66 (3%)
Query: 164 PKRRNVK--ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
PK++ K +KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+
Sbjct: 178 PKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQ 237
Query: 222 TQVQSL 227
QV+ L
Sbjct: 238 LQVKIL 243
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 110
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 49/56 (87%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
S+DPQSVAA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 24 SQDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 79
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 53/68 (77%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
S+K + N I+ DPQS+ AR RRERI++R++ LQ LVP GTK+D ++ML++A+HYVKF
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKF 186
Query: 220 LKTQVQSL 227
L+ Q++ L
Sbjct: 187 LQLQIKLL 194
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 51/62 (82%)
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R + + SKD QS+ A+ RRERI+ER+RILQ+LVP GTK+D ++ML+EA+ YVKFL+ Q++
Sbjct: 168 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 227
Query: 226 SL 227
L
Sbjct: 228 LL 229
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 48/56 (85%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+KDPQS+AA++RRERISER+R LQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 201 TKDPQSLAAKNRRERISERLRALQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 256
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 51/62 (82%)
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R + + SKD QS+ A+ RRERI+ER+RILQ+LVP GTK+D ++ML+EA+ YVKFL+ Q++
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 215
Query: 226 SL 227
L
Sbjct: 216 LL 217
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P ++ R + DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YV
Sbjct: 257 PPNLDRKSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 316
Query: 218 KFLKTQVQSL 227
KFL+ Q++ L
Sbjct: 317 KFLQLQIKLL 326
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 47/52 (90%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
DPQS+ AR RRERI+ER+R+LQ LVP GTK+D ++ML+EA++YVKFL+TQ++
Sbjct: 283 DPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFLQTQIK 334
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ L+P GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLL 294
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P ++ R + DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YV
Sbjct: 257 PPNLHRKSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 316
Query: 218 KFLKTQVQSL 227
KFL+ Q++ L
Sbjct: 317 KFLQLQIKLL 326
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ L+P GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLL 294
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ L+P GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLL 294
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+ DPQSV ARHRRE+I+ER++ LQ LVP G K+D +MLDEAIHYVKFL+ QV+ L+
Sbjct: 3 ATDPQSVYARHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQNQVELLK 59
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 230 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLL 283
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 230 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLL 283
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+ DPQS+AARHRRERIS+R++ILQ LVP TK+D +ML++AI+YVKFL+ QV+ L
Sbjct: 365 ANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKVL 420
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA++YVKFL+ Q++ L
Sbjct: 273 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLL 326
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
SVK R + DPQS+ AR RRE+I+ER++ LQ LVP GTK+D ++ML+EA+HYVKF
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 221
Query: 220 LKTQVQSL 227
L+ Q++ L
Sbjct: 222 LQLQIKLL 229
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 157 DPDSVKPPK--RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI 214
D D+ +P R + +PQS+ AR RRERI+ER++ILQ LVP GTK+D ++ML+EA+
Sbjct: 216 DADARRPKGKGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVDISTMLEEAV 275
Query: 215 HYVKFLKTQVQSL 227
HYVKFL+ Q++ L
Sbjct: 276 HYVKFLQLQIRLL 288
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 158 PD-SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY 216
PD +K R N + DPQ V A+ RRERI+ER++ILQ LVP GTK+D ++ML+EA+ Y
Sbjct: 230 PDLKLKGKSRCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQY 289
Query: 217 VKFLKTQVQSL 227
VKFL+ Q++ L
Sbjct: 290 VKFLQVQIKLL 300
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 256 DPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 309
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
S DPQS+ AR RRERI+ER++ LQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 222 STDPQSLYARKRRERINERLKTLQTLVPNGTKVDMSTMLEEAVHYVKFLQLQIKVL 277
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 273 DPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 326
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 233 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
SVK R + DPQS+ AR RRE+I+ER++ LQ LVP GTK+D ++ML+EA+HYVKF
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 221
Query: 220 LKTQVQSL 227
L+ Q++ L
Sbjct: 222 LQLQIKLL 229
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 246 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 46/52 (88%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
DPQS+ AR RRERI+ER++ILQ +VP GTK+D ++ML+EA+HYVKFL+ Q++
Sbjct: 279 DPQSLYARKRRERINERLKILQHIVPNGTKVDISTMLEEAVHYVKFLQLQIK 330
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA++YVKFL+ Q++ L
Sbjct: 270 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLL 323
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 193 DPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 246
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
SVK R + DPQS+ AR RRE+I+ER++ LQ LVP GTK+D ++ML+EA+HYVKF
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 221
Query: 220 LKTQVQ 225
L+ Q++
Sbjct: 222 LQLQIK 227
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 268 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 321
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 264 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 317
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ+LVP GTK+D ++ML+EA YVKFL+ Q++ L
Sbjct: 199 DPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAAQYVKFLQLQIKLL 252
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 173 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 255 KDPQSLAAKNRRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 309
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 263 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 316
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 233 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
+K R + DPQS+ AR RRE+I+ER++ILQ LVP GTK+D ++ML+EA+ YVKFL
Sbjct: 242 LKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFL 301
Query: 221 KTQVQSL 227
+ Q++ L
Sbjct: 302 QLQIKLL 308
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ LVP GTK+D ++ML+EA+HYV FL+ Q++ L
Sbjct: 281 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVNFLQLQIKLL 334
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
K R + DPQS+ AR RRERI+ER++ LQ LVP GTK+D ++ML+EA+HYVKFL+
Sbjct: 213 KGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQ 272
Query: 222 TQVQSL 227
Q++ L
Sbjct: 273 LQIKLL 278
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R N + DPQS+ AR RRE+I+ER+R LQ LVP GTK+D ++ML++AIHYVKFL+ Q++
Sbjct: 199 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIK 258
Query: 226 SL 227
L
Sbjct: 259 LL 260
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%)
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
P + + + DPQS+ AR RRERI+ER+++LQ LVP GTK+D ++ML+EA+ YVKFL+ Q
Sbjct: 217 PSGKGRQSTTDPQSLYARKRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 276
Query: 224 VQSL 227
++ L
Sbjct: 277 IKLL 280
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQSV ARHRRE+I+ER++ LQRLVP G ++D +ML+EAIH+VKFL+ Q++ L
Sbjct: 479 DPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELL 532
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+ DPQS+AARHRRERIS+R++ILQ LVP TK+D +ML++AI+YVKFL+ QV+
Sbjct: 365 ANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVK 418
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R N + DPQS+ AR RRE+I+ER+R LQ LVP GTK+D ++ML++AIHYVKFL+ Q++
Sbjct: 185 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIK 244
Query: 226 SL 227
L
Sbjct: 245 LL 246
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
+KP R + DPQS+AAR RRERIS+R++ILQ L+P G+K+D +ML++AI+YVKFL
Sbjct: 406 LKP--RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFL 463
Query: 221 KTQVQSLERAAANRPAGIG 239
+ QV+ L P G G
Sbjct: 464 QLQVKVLMNDEYWPPKGDG 482
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
+KP R + DPQS+AAR RRERIS+R++ILQ L+P G+K+D +ML++AI+YVKFL
Sbjct: 406 LKP--RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFL 463
Query: 221 KTQVQSLERAAANRPAGIG 239
+ QV+ L P G G
Sbjct: 464 QLQVKVLMNDEYWPPKGDG 482
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+ DPQSV ARHRRE+I+ER++ LQ LVP G K+D +MLDEAIHYV+FL+ QV L+
Sbjct: 3 ATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLLK 59
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+PQS+ AR RRERI+ER+++LQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLL 275
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
+KP R+ + DPQS+AAR RRERIS+R++ILQ LVP G+K+D +ML++AI+YVKF+
Sbjct: 231 LKPRSRQGT--ANDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFM 288
Query: 221 KTQVQS 226
+ Q+Q+
Sbjct: 289 QLQLQA 294
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
+KP R+ + DPQS+AAR RRERIS+R++ILQ LVP G+K+D +ML++AI+YVKF+
Sbjct: 231 LKPRSRQGT--ANDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFM 288
Query: 221 KTQVQS 226
+ Q+Q+
Sbjct: 289 QLQLQA 294
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRE+I+ER+++LQ LVP GTK+D ++ML+EA+HY+KF++ Q++ L
Sbjct: 255 DPQSLYARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLL 308
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 51/66 (77%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP + +KD QS+AA++RRERISER+++LQ LVP G+K+D +ML++AI YVKFL+
Sbjct: 228 KPKPKSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKVDLVTMLEKAISYVKFLQ 287
Query: 222 TQVQSL 227
QV+ L
Sbjct: 288 LQVKVL 293
>gi|227016417|gb|ACP18670.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 99
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 218
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVK
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVK 99
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA YVKFL+ Q++ L
Sbjct: 205 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIKLL 258
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
D QS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 205 DAQSIYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 258
>gi|140084384|gb|ABO84936.1| Rhd6-like 7 [Physcomitrella patens]
Length = 67
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 47/56 (83%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+ DPQSV ARHRRE+I+ER++ LQRLVP G ++D +ML+EAIH+VKFL+ Q++ L
Sbjct: 3 ATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELL 58
>gi|125605938|gb|EAZ44974.1| hypothetical protein OsJ_29617 [Oryza sativa Japonica Group]
Length = 287
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 55/61 (90%)
Query: 140 AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 199
AMRE IF +AA+QP+ IDP++V+PPKRRNV+ISKDPQSVAAR RRERISERIRILQR P
Sbjct: 116 AMREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRPRP 175
Query: 200 G 200
G
Sbjct: 176 G 176
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+ ++ML+EA+ YVKFL+ Q++ L
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVHISTMLEEAVQYVKFLQLQIKLL 299
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 50/68 (73%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
S K R + + +PQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA YVKF
Sbjct: 189 SKKTCARASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKF 248
Query: 220 LKTQVQSL 227
L+ Q++ L
Sbjct: 249 LQLQIKLL 256
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 46/52 (88%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+PQS+ AR RRERI+ER+++LQ LVP GTK+D ++ML+EA+HYVKFL+ Q++
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIR 273
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
DPQSV AR RRE+I+ER+R LQ L+P G K+D +MLDEA+HYV+FLK QV
Sbjct: 456 DPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQV 506
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 48/56 (85%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+KDPQSVAA+ RRE+I+E++++LQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 235 TKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVL 290
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI +R+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q + L
Sbjct: 249 DPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQNKLL 302
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 48/56 (85%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+KDPQSVAA+ RRE+I+E++++LQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 201 TKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVL 256
>gi|357492173|ref|XP_003616375.1| Transcription factor bHLH83 [Medicago truncatula]
gi|355517710|gb|AES99333.1| Transcription factor bHLH83 [Medicago truncatula]
Length = 325
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 16/93 (17%)
Query: 151 MQPIHIDPDSVKPPKRRNVKI--SKDPQSVAARHRRERISERIRILQRLVPGGTK----- 203
MQP + K+ K SKDPQSVAA++RRERISER++ILQ LVP G+K
Sbjct: 202 MQPTNAKKPCTAASKKEKHKSNPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDFQI 261
Query: 204 ---------MDTASMLDEAIHYVKFLKTQVQSL 227
+D +ML++AI YVKFL+ QV+ L
Sbjct: 262 SPQSYVAFFVDLVTMLEKAISYVKFLQLQVKVL 294
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 160 SVKPPKRRNVKISK----DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
+V P R V+ + DP S+A R RRERI+ER++ LQ LVP G K D ASMLDE I
Sbjct: 129 AVPPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIID 188
Query: 216 YVKFLKTQVQSL 227
YVKFL+ QV+ L
Sbjct: 189 YVKFLQLQVKVL 200
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 46/55 (83%)
Query: 173 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
KD QS+ A+ RRERI+ER+R LQ+L+P GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 159 KDLQSLYAKRRRERINERLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLL 213
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 47/56 (83%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
SKD QS+ A+ RRERI+E++R LQ+L+P GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 174 SKDSQSLYAKRRRERINEKLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLL 229
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 15/125 (12%)
Query: 114 RYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIH-----------IDPDSVK 162
++ R G N G+ SQ A+R ++ V +QP P S++
Sbjct: 83 KHERDGMNIGNLYAGLEHSQSH----AVRHSLPSVHHVQPFQGPPTTSTTVTVPQPPSIR 138
Query: 163 PPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKT 222
P R + DP S+A R RRERISERI+ LQ LVP K D A+MLDE + YVKFL+
Sbjct: 139 PRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRL 198
Query: 223 QVQSL 227
QV+ L
Sbjct: 199 QVKVL 203
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KP R + DP S+A R RRERI+ER++ LQ LVP G K D ASMLDE I YVKFL
Sbjct: 126 TKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFL 185
Query: 221 KTQVQSL 227
+ QV+ L
Sbjct: 186 QLQVKVL 192
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KP R + DP S+A R RRERI+ER++ LQ LVP G K D ASMLDE I YVKFL
Sbjct: 126 TKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFL 185
Query: 221 KTQVQSL 227
+ QV+ L
Sbjct: 186 QLQVKVL 192
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+ DPQSV AR RRE+I+ER+R LQ L+P G K+D +MLDEA+HYV+FLK QV L+
Sbjct: 3 ATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVTLLK 59
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 155 HIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI 214
H + S KP R + DP S+A R RRE+ISER++ LQ LVP K D +SMLDE I
Sbjct: 311 HGNSVSAKPRSRARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDEII 370
Query: 215 HYVKFLKTQVQSLERAAANRPAGI 238
YVKFL+ QV+ L + P +
Sbjct: 371 DYVKFLQLQVKVLSMSRLGAPGAV 394
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 48/56 (85%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
SK+ QS+ A+ RRERI+E++R+LQ+L+P GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 170 SKNMQSLYAKKRRERINEKLRVLQQLIPNGTKVDISTMLEEAVQYVKFLQLQIKVL 225
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KP R + DP S+A R RRERI+ER++ LQ LVP G K D ASMLDE I YVKFL
Sbjct: 183 TKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFL 242
Query: 221 KTQVQSL 227
+ QV+ L
Sbjct: 243 QLQVKVL 249
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 7/71 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY 216
PP+ R KI + DP S+A R RRERI+ER++ LQ LVP G K D ASMLDE I Y
Sbjct: 131 PPQSR-TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDY 189
Query: 217 VKFLKTQVQSL 227
VKFL+ QV+ L
Sbjct: 190 VKFLQLQVKVL 200
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 45/66 (68%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRERI+ER++ LQ LVP G K D ASMLDE I YVKFL+
Sbjct: 125 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 184
Query: 222 TQVQSL 227
QV+ L
Sbjct: 185 LQVKVL 190
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 7/71 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY 216
PP+ R KI + DP S+A R RRERI+ER++ LQ LVP G K D ASMLDE I Y
Sbjct: 131 PPQSR-TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDY 189
Query: 217 VKFLKTQVQSL 227
VKFL+ QV+ L
Sbjct: 190 VKFLQLQVKVL 200
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 47/70 (67%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P S++P R + DP S+A R RRERISERI+ LQ LVP K D A+MLDE + YV
Sbjct: 135 PPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYV 194
Query: 218 KFLKTQVQSL 227
KFL+ QV+ L
Sbjct: 195 KFLRLQVKVL 204
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS A+ RRERISER+++LQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 171 DPQSAVAKVRRERISERLKVLQDLVPNGTKVDMVTMLEKAITYVKFLQLQVKVL 224
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
PQS AA+ RRERISER+++LQ LVP GTK+D +ML++AI+YVKFL+ QV+ L
Sbjct: 209 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 261
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
PQS AA+ RRERISER+++LQ LVP GTK+D +ML++AI+YVKFL+ QV+ L
Sbjct: 208 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 260
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 18/119 (15%)
Query: 124 NSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPD---------------SVKPPKRRN 168
NSST V + +S + ET + + + +D + SV + +
Sbjct: 55 NSSTNVCFDYQDDSFVSAEETT--IGNKRKVQMDTENELMTNRSKEVRTKMSVSKACKHS 112
Query: 169 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
V ++ QS A++RR+RI+ER+RILQ L+P GTK+D ++ML+EAI YVKFL Q++ L
Sbjct: 113 VS-AESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLL 170
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 218
D++ + + + + + QS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVK
Sbjct: 204 DNLGGKAKADRRSATESQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVK 263
Query: 219 FLKTQVQSL 227
FL+ Q++ L
Sbjct: 264 FLQLQIKLL 272
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
PQS AA+ RRERISER+++LQ LVP GTK+D +ML++AI+YVKFL+ QV+ L
Sbjct: 202 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 254
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R N + DPQS+ A+ RRERI+ R+R LQ LVP GTK+D ++ML+EA+ YVKFL+ Q++
Sbjct: 205 RSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTKVDISTMLEEAVRYVKFLQLQIK 264
Query: 226 SL 227
L
Sbjct: 265 LL 266
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQS 226
DPQS+ AR RRERI+ER+R LQ LVP G K+D +ML+EAI+YVKFL+ Q+ S
Sbjct: 246 DPQSIYARQRRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQLQLLS 298
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 154 IHIDPDSV------KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 207
+ I P+SV KP R + DP S+A R RRE+IS+R++ LQ LVP K D A
Sbjct: 303 VQIQPNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKA 362
Query: 208 SMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
SMLDE I YVKFL+ QV+ L + P +
Sbjct: 363 SMLDEIIDYVKFLQLQVKVLSMSRLGAPGAV 393
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
S KP R + DP S+A R RRE+ISER++ LQ LVP K D +SMLDE I YVKF
Sbjct: 315 SAKPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKF 374
Query: 220 LKTQVQSLERAAANRPAGI 238
L+ QV+ L + P +
Sbjct: 375 LQLQVKVLSMSRLGAPGAV 393
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 154 IHIDPDSV------KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 207
+ I P+SV KP R + DP S+A R RRE+IS+R++ LQ LVP K D A
Sbjct: 303 VQIQPNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKA 362
Query: 208 SMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
SMLDE I YVKFL+ QV+ L + P +
Sbjct: 363 SMLDEIIDYVKFLQLQVKVLSMSRLGAPGAV 393
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 163 PPKRRNVKISK----DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 218
PP+++ V+ + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVK
Sbjct: 198 PPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVK 257
Query: 219 FLKTQVQSLERAAANRPAGI 238
FL+ QV+ L + AG+
Sbjct: 258 FLQLQVKVLSMSRLGGAAGM 277
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 163 PPKRRNVKISK----DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 218
PP+++ V+ + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVK
Sbjct: 198 PPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVK 257
Query: 219 FLKTQVQSLERAAANRPAGI 238
FL+ QV+ L + AG+
Sbjct: 258 FLQLQVKVLSMSRLGGAAGM 277
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 163 PPKRRNVKISK----DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 218
PP++ V+ + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVK
Sbjct: 177 PPRQTRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVK 236
Query: 219 FLKTQVQSLERAAANRPAGI 238
FL+ QV+ L + AG+
Sbjct: 237 FLQLQVKVLSMSRLGGAAGM 256
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
Query: 166 RRNVKIS---KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKT 222
R+N K S KD QS A+ RR+RI+ER+RILQ+L+P GTK+D ++ML+EA+ YVKFL
Sbjct: 93 RKNGKKSRAAKDSQSHYAKKRRQRINERLRILQKLIPNGTKVDISTMLEEAVQYVKFLHL 152
Query: 223 QVQSL 227
Q++ L
Sbjct: 153 QIKLL 157
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 163 PPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKT 222
P +RR + DPQS+AAR RRE+ ++RIRILQ LVP G ++DT ML + YV+FL+
Sbjct: 673 PKQRRRHGTATDPQSIAARTRREKFTDRIRILQSLVPNGERLDTVHMLSQTFEYVRFLQH 732
Query: 223 QVQSL 227
+V L
Sbjct: 733 KVWDL 737
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
VKP R + DP S+A R RRE+IS+R++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFL 375
Query: 221 KTQVQSLERAAANRPAGI 238
+ QV+ L + P +
Sbjct: 376 QLQVKVLSMSRLGAPGAV 393
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
VKP R + DP S+A R RRE+IS+R++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 313 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFL 372
Query: 221 KTQVQSLERAAANRPAGI 238
+ QV+ L + P +
Sbjct: 373 QLQVKVLSMSRVGAPGAV 390
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 7/71 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY 216
PP+ R KI + DP S+A R RRERI+ER++ LQ LVP G K D ASMLDE I Y
Sbjct: 131 PPQSR-TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDY 189
Query: 217 VKFLKTQVQSL 227
V+FL+ QV+ L
Sbjct: 190 VEFLQLQVKVL 200
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 164 PKRRNVKISK----DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
PK++ V+ + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKF
Sbjct: 242 PKQQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKF 301
Query: 220 LKTQVQSL 227
L+ QV+ L
Sbjct: 302 LQLQVKVL 309
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P +++P R + DP S+A R RRERI+ER++ LQ LVP K D A+MLDE + YV
Sbjct: 162 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYV 221
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 222 KFLRLQVKVL---SMSRLGGAGAVAQLV 246
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 173 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+ PQS AA+ RRERISER+++LQ LVP GTK+D +ML++AI+YVKFL+ QV+ L
Sbjct: 222 EQPQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 276
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 163 PPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKT 222
P +RR + DPQS+AAR RRE+ ++RIRILQ LVP G ++DT ML + YV+FL+
Sbjct: 672 PKQRRRHGTATDPQSIAARTRREKFTDRIRILQGLVPNGERLDTVHMLSQTFEYVRFLQH 731
Query: 223 QVQSL 227
+V L
Sbjct: 732 KVWDL 736
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KP R + DP S+A R RRE+ISER++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 311 AKPRTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFL 370
Query: 221 KTQVQSLERAAANRPAGI 238
+ QV+ L + P +
Sbjct: 371 QLQVKVLSMSRLGAPGAV 388
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
S KP R + DP S+A R RRE+ISER++ LQ LVP K D +SMLDE I YVKF
Sbjct: 314 SAKPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKF 373
Query: 220 LKTQVQSLERAAANRPAGI 238
L+ QV+ L + P +
Sbjct: 374 LQLQVKVLCMSRLGAPGAV 392
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
VKP R + DP S+A R RRE+IS+R++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 278 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFL 337
Query: 221 KTQVQSLERAAANRPAGI 238
+ QV+ L + P +
Sbjct: 338 QLQVKVLSMSRVGAPGAV 355
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KP R + DP S+A R RRE+ISER++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 312 AKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFL 371
Query: 221 KTQVQSLERAAANRPAGI 238
+ QV+ L + P +
Sbjct: 372 QLQVKVLSMSRLGAPGAV 389
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P +++P R + DP S+A R RRERI+ER++ LQ LVP K D A+MLDE + YV
Sbjct: 92 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYV 151
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 152 KFLRLQVKVL---SMSRLGGAGAVAQLV 176
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KP R + DP S+A R RRE+ISER++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 312 AKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFL 371
Query: 221 KTQVQSLERAAANRPAGI 238
+ QV+ L + P +
Sbjct: 372 QLQVKVLSMSRLGAPGAV 389
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KP R + DP S+A R RRE+ISER++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 312 AKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFL 371
Query: 221 KTQVQSLERAAANRPAGI 238
+ QV+ L + P +
Sbjct: 372 QLQVKVLSMSRLGAPGAV 389
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L + +
Sbjct: 208 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVL---SMS 264
Query: 234 RPAGIGFPATLT 245
R G G A L
Sbjct: 265 RLGGAGAVAPLV 276
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L + +
Sbjct: 205 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVL---SMS 261
Query: 234 RPAGIGFPATLT 245
R G G A L
Sbjct: 262 RLGGAGAVAPLV 273
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 44/66 (66%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 171 KPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 230
Query: 222 TQVQSL 227
QV+ L
Sbjct: 231 LQVKVL 236
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P V+P R + DP S+A R RRERI+ER++ LQ LVP K D A+MLDE + YV
Sbjct: 51 PPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYV 110
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 111 KFLRLQVKVL---SMSRLGGAGAVAQLV 135
>gi|315175249|gb|ADT82843.1| barren stalk1/lax panicle1 [Pharus latifolius]
Length = 141
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV SL +AA
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-SLHQAA 49
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P V+P R + DP S+A R RRERI+ER++ LQ LVP K D A+MLDE + YV
Sbjct: 150 PPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYV 209
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 210 KFLRLQVKVL---SMSRLGGAGAVAQLV 234
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRE+I+ER++ LQ LVP +K+D ASMLDE I YVKFL+
Sbjct: 348 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQ 407
Query: 222 TQVQSL 227
QV+ L
Sbjct: 408 LQVKVL 413
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
+P R + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 28 ARPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFL 87
Query: 221 KTQVQSLERAAANRPAGIGFPATLTTGNYP 250
+ QV+ L + +R G G +L + P
Sbjct: 88 QLQVKVL---SMSRLGGAGALPSLVNNDLP 114
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KP R + DP S+A R RRE+ISER++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 235 AKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFL 294
Query: 221 KTQVQSLERAAANRPAGI 238
+ QV+ L + P +
Sbjct: 295 QLQVKVLSMSRLGAPGAV 312
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 41/56 (73%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV S+ R
Sbjct: 248 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLSMSR 303
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L +
Sbjct: 234 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMS--- 290
Query: 234 RPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGA 266
R G A L Y G Q NG
Sbjct: 291 RLGGAAAVAPLVADMYSEGGGDCIQANGNSNGG 323
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER---A 230
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV S+ R A
Sbjct: 259 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLSMSRLGGA 318
Query: 231 AANRPAGIGFPATLTTGNYP 250
AA P A +++ +P
Sbjct: 319 AAVAP----LVADMSSEQFP 334
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 262 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 315
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 206 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 259
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 149 AAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTAS 208
AM P P + +P +R + DP S+A R RRERI+ER+R LQ LVP K D A+
Sbjct: 110 GAMVPQPHQPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAA 169
Query: 209 MLDEAIHYVKFLKTQVQSLERAAANRPAGIGFPATLTT 246
MLDE + YVKFL+ QV+ L + +R G G A L
Sbjct: 170 MLDEILDYVKFLRLQVKVL---SMSRLGGAGAVAQLIA 204
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P ++P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YV
Sbjct: 173 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYV 232
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 233 KFLRLQVKVL---SMSRLGGAGAVAQLV 257
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P +++P R + DP S+A R RRERI+ER++ LQ LVP K D A+MLDE + YV
Sbjct: 168 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYV 227
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 228 KFLRLQVKVL---SMSRLGGAGAVAQLV 252
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 45/68 (66%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
S +P R + DP S+A R RRE+I+ER++ LQ LVP K D ASMLDE I YVKF
Sbjct: 131 SARPRVRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKF 190
Query: 220 LKTQVQSL 227
L+ QV+ L
Sbjct: 191 LQLQVKVL 198
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 46 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 99
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 213 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 266
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
+KP R+ + DPQS+AAR RRERISER+++LQ L+P G K+D +ML++AI YV+ L
Sbjct: 637 LKPRARQGS--ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCL 694
Query: 221 KTQVQSLERAAANRPAGIG-FPATL 244
+ Q++ L+ + P +G P TL
Sbjct: 695 EFQIKMLKNDSL-WPKALGPLPNTL 718
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P +++P R + DP S+A R RRERI+ER++ LQ LVP K D A+MLDE + YV
Sbjct: 144 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYV 203
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 204 KFLRLQVKVL---SMSRLGGAGAVAQLV 228
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 226 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 279
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 44/67 (65%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
+P R + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 27 ARPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFL 86
Query: 221 KTQVQSL 227
+ QV+ L
Sbjct: 87 QLQVKVL 93
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 154 IHIDPDSV------KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 207
+ I P+SV KP R + DP S+A R RRE+IS+R++ LQ LVP K D A
Sbjct: 303 VQIQPNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKA 362
Query: 208 SMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
SMLDE I +VKFL+ QV+ L + P +
Sbjct: 363 SMLDEIIDHVKFLQLQVKVLSMSRLGAPGAV 393
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P ++P R + DP S+A R RRERI+ER++ LQ LVP K D A+MLDE + YV
Sbjct: 162 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYV 221
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 222 KFLRLQVKVL---SMSRLGGAGAVAQLV 246
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L +
Sbjct: 173 DPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 232
Query: 234 RPAGIG 239
A +G
Sbjct: 233 GAAAVG 238
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
DPQS+AAR RRERISER+++LQ L+P G K+D +ML++AI YV+ L+ Q++ L+ +
Sbjct: 763 DPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIKMLKNDSI- 821
Query: 234 RPAGIG-FPATL 244
P +G P TL
Sbjct: 822 WPKALGPLPNTL 833
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L + +
Sbjct: 153 DPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQVKVL---SMS 209
Query: 234 RPAGIGFPATLTTGNYP 250
R G G A L P
Sbjct: 210 RLGGAGAVAPLVANMSP 226
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P ++P R + DP S+A R RRERI+ER++ LQ LVP K D A+MLDE + YV
Sbjct: 159 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYV 218
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLTT 246
KFL+ QV+ L + +R G G A L
Sbjct: 219 KFLRLQVKVL---SMSRLGGAGAVAQLVA 244
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 265 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 318
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 113 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 166
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
+KP R+ + DPQS+AAR RRERISER+++LQ L+P G K+D +ML++AI YV+ L
Sbjct: 820 LKPRARQGS--ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCL 877
Query: 221 KTQVQSLERAAANRPAGIG-FPATL 244
+ Q++ L+ + P +G P TL
Sbjct: 878 EFQIKMLKNDSL-WPKALGPLPNTL 901
>gi|315175251|gb|ADT82844.1| barren stalk1/lax panicle1 [Miscanthus sinensis]
Length = 162
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK Q+ SL +AA
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI-SLHQAA 49
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 173 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
K+ QS AA+ RRERISER+R LQ LVP G K+D +MLD AI YVKF++ Q++ LE
Sbjct: 197 KETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVLE 252
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 173 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
K+ QS AA+ RRERISER+R LQ LVP G K+D +MLD AI YVKF++ Q++ LE
Sbjct: 197 KETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVLE 252
>gi|315175247|gb|ADT82842.1| barren stalk1/lax panicle1 [Streptochaeta angustifolia]
Length = 125
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK Q+ SL +AA
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI-SLHQAA 49
>gi|357128639|ref|XP_003565978.1| PREDICTED: uncharacterized protein LOC100831424 [Brachypodium
distachyon]
Length = 299
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGG--TKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
+PQ+VAAR RRE++SER+R L+RLVPGG KMDTASML +A Y+ FLK Q+ + A
Sbjct: 181 EPQTVAARLRREKVSERLRALRRLVPGGGSGKMDTASMLHQAACYLSFLKAQLARFQAMA 240
Query: 232 A 232
A
Sbjct: 241 A 241
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L + +
Sbjct: 268 DPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL---SMS 324
Query: 234 RPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGA 266
R G A +T + PP ++ +NGA
Sbjct: 325 RLGNAG--AVMT--DLPPEDSNQFLAALGQNGA 353
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 18/119 (15%)
Query: 124 NSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPD---------------SVKPPKRRN 168
NSST V + +S + ET + + + +D + SV + +
Sbjct: 55 NSSTNVCFDYQDDSFVSAEETT--IGNKRKVQMDTENELMMNRSKEVRTKMSVSKACKHS 112
Query: 169 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
V ++ Q A++RR+RI+ER+RILQ L+P GTK+D ++ML+EAI YVKFL Q++ L
Sbjct: 113 VS-AESSQPYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLL 170
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 164 PKRRNVKISK----DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
P R+ V+ + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE + YVKF
Sbjct: 235 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKF 294
Query: 220 LKTQVQSL 227
L+ QV+ L
Sbjct: 295 LQLQVKVL 302
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 164 PKRRNVKISK----DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
P R+ V+ + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE + YVKF
Sbjct: 234 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKF 293
Query: 220 LKTQVQSL 227
L+ QV+ L
Sbjct: 294 LQLQVKVL 301
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRE+I+ER++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 293 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 352
Query: 222 TQVQSL 227
QV+ L
Sbjct: 353 LQVKVL 358
>gi|315175241|gb|ADT82839.1| barren stalk1/lax panicle1 [Chasmanthium latifolium]
Length = 151
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK Q+ SL +AA
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKGQI-SLHQAA 49
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YV+FL+
Sbjct: 96 KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
Query: 222 TQVQSL 227
QV+ L
Sbjct: 156 LQVKVL 161
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRE+I+ER++ LQ LVP K+D ASMLDE I YVKFL+ QV+ L
Sbjct: 249 DPHSIAERLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKVL 302
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YV+FL+
Sbjct: 96 KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
Query: 222 TQVQSL 227
QV+ L
Sbjct: 156 LQVKVL 161
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 13/67 (19%)
Query: 174 DPQSVAAR-------------HRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL
Sbjct: 246 DPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFL 305
Query: 221 KTQVQSL 227
+ Q++ L
Sbjct: 306 QLQIKLL 312
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L +
Sbjct: 222 DPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 281
Query: 234 RPAGI 238
AG+
Sbjct: 282 GAAGM 286
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 268 DPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 321
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 39 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQLQVKVL 92
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 204 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 257
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 197 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 250
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 45/55 (81%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
DPQS+AAR RRERISER+++LQ L+P G K+D +ML++AI YV+ L+ Q++ L+
Sbjct: 57 DPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIKMLK 111
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P +++P R + DP S+A R RRERI+ER++ LQ LVP K D A+M+DE + YV
Sbjct: 156 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYV 215
Query: 218 KFLKTQVQSL 227
KFL+ QV+ L
Sbjct: 216 KFLRLQVKVL 225
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P + +P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YV
Sbjct: 126 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYV 185
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 186 KFLRLQVKVL---SMSRLGGAGAVAQLV 210
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRE+I+ER++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 146 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 205
Query: 222 TQVQSL 227
QV+ L
Sbjct: 206 LQVKVL 211
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P + +P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YV
Sbjct: 17 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYV 76
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLTT 246
KFL+ QV+ L + +R G G A L
Sbjct: 77 KFLRLQVKVL---SMSRLGGAGAVAQLVA 102
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P + +P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YV
Sbjct: 126 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYV 185
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 186 KFLRLQVKVL---SMSRLGGAGAVAQLV 210
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P + +P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YV
Sbjct: 126 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYV 185
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLT 245
KFL+ QV+ L + +R G G A L
Sbjct: 186 KFLRLQVKVL---SISRLGGAGAVAQLV 210
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 164 PKRRNVKISK----DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
P R+ V+ + DP S+A R RRERI+ER++ LQ LV K D ASMLDE I YVKF
Sbjct: 140 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKF 199
Query: 220 LKTQVQSLER 229
L+ QV S+ R
Sbjct: 200 LQLQVLSMSR 209
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P + +P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YV
Sbjct: 117 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYV 176
Query: 218 KFLKTQVQSL 227
KFL+ QV+ L
Sbjct: 177 KFLRLQVKVL 186
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P + +P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YV
Sbjct: 109 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYV 168
Query: 218 KFLKTQVQSL 227
KFL+ QV+ L
Sbjct: 169 KFLRLQVKVL 178
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 40/53 (75%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQS 226
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV++
Sbjct: 168 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKA 220
>gi|315175245|gb|ADT82841.1| barren stalk1/lax panicle1 [Joinvillea ascendens]
Length = 140
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA---NRPAGIG 239
RR RIS+R R+L+ LVPGG+KMDT SML++AI YV+FLK Q++ L++ A ++ +G G
Sbjct: 1 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIDYVQFLKAQIR-LQQTALMLHDQESGHG 59
Query: 240 FPATLTT 246
F A TT
Sbjct: 60 FDADATT 66
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P + +P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YV
Sbjct: 108 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYV 167
Query: 218 KFLKTQVQSL 227
KFL+ QV+ L
Sbjct: 168 KFLRLQVKVL 177
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 164 PKRRNVKISK----DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
P R+ V+ + DP S+A R RRERI+ER++ LQ LV K D ASMLDE I YVKF
Sbjct: 112 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKF 171
Query: 220 LKTQVQSLER 229
L+ QV S+ R
Sbjct: 172 LQLQVLSMSR 181
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 39/53 (73%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
P S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 270 PHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 322
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YV+FL+ QV+ L +
Sbjct: 203 DPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFLQLQVKVLSMSRLG 262
Query: 234 RPAG 237
AG
Sbjct: 263 GAAG 266
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
++ P R + DP S+A R RRERISERI+ LQ LVP K D A+++DE + YVKF
Sbjct: 129 AIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKF 188
Query: 220 LKTQVQSLERAAANRPAGIGFPATLTT 246
L+ QV+ L + +R G A L T
Sbjct: 189 LRLQVKVL---SMSRLGGTSAVAQLVT 212
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
+P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 178 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 237
Query: 222 TQVQSLERAAANRPAGIGFPATLT 245
QV+ L + +R G G A L
Sbjct: 238 LQVKVL---SMSRLGGAGAVAQLV 258
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
+P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 129 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 188
Query: 222 TQVQSLERAAANRPAGIGFPATLTT 246
QV+ L + +R G G A L
Sbjct: 189 LQVKVL---SMSRLGGAGAVAQLVA 210
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRE+IS+R++ LQ LVP + D ASMLDE I YVKFL+
Sbjct: 295 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQ 354
Query: 222 TQVQSL 227
QV+ L
Sbjct: 355 LQVKVL 360
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE + YVKFL+ QV+ L
Sbjct: 13 DPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQLQVKVL 66
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Query: 145 IFRVAAMQP------IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLV 198
+FR A QP + P + +P R + DP S+A R RRERI+ER+R LQ LV
Sbjct: 98 VFR--AQQPKQGGAGVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELV 155
Query: 199 PGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
P K D A MLDE + YVKFL+ QV+ L
Sbjct: 156 PNTNKTDRAVMLDEILDYVKFLRLQVKVL 184
>gi|125596454|gb|EAZ36234.1| hypothetical protein OsJ_20554 [Oryza sativa Japonica Group]
Length = 189
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 39/43 (90%)
Query: 171 ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 213
+S +PQSVAAR RRER+S+R+R LQRLVPGG ++DTASML+EA
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEA 162
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P ++P R + DP S+A R RR RI+ER++ LQ LVP K D A+MLDE + YV
Sbjct: 9 PPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYV 68
Query: 218 KFLKTQVQSL 227
KFL+ Q++ L
Sbjct: 69 KFLRLQIKVL 78
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P ++P R + DP S+A R RR RI+ER++ LQ LVP K D A+MLDE + YV
Sbjct: 13 PPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYV 72
Query: 218 KFLKTQVQSL 227
KFL+ QV+ L
Sbjct: 73 KFLRLQVKVL 82
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRE+IS+R++ LQ LVP + D ASMLDE I YVKFL+
Sbjct: 295 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQ 354
Query: 222 TQVQ 225
QV+
Sbjct: 355 LQVK 358
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRE+IS+R++ LQ LVP K + ASMLDE I YVKFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 222 TQVQSL 227
QV+ L
Sbjct: 371 LQVKVL 376
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRE+IS+R++ LQ LVP K + ASMLDE I YVKFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 222 TQVQSL 227
QV+ L
Sbjct: 371 LQVKVL 376
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 87 RRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 131
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM---DTASMLDEAIHYVKFLKTQVQS 226
DP S+A R RRERI+ER++ LQ LVP K+ D ASMLDE I YVKFL+ QV++
Sbjct: 259 DPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQVKA 314
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR-PA 236
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A+ P
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPP 409
Query: 237 GIGFPATLTTGNYP 250
+ FP + G+YP
Sbjct: 410 AVMFPPGM--GHYP 421
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR-PA 236
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A+ P
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPP 409
Query: 237 GIGFPATLTTGNYP 250
+ FP + G+YP
Sbjct: 410 AVMFPPGM--GHYP 421
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 12/112 (10%)
Query: 143 ETIFRVAAMQPIHIDPDSVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQR 196
+T ++ +P+ +P S PPK+ + + + D S+A R RRE+ISER++ILQ
Sbjct: 123 KTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQD 182
Query: 197 LVPGGTK-MDTASMLDEAIHYVKFLKTQVQ----SLERAAANRPAGI-GFPA 242
LVPG K + A +LDE I+Y++ L+ QV+ LE + +GI GFP+
Sbjct: 183 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPS 234
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM---DTASMLDEAIHYVKFLKTQVQS 226
DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV++
Sbjct: 247 DPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQLQVKA 302
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 12/112 (10%)
Query: 143 ETIFRVAAMQPIHIDPDSVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQR 196
+T ++ +P+ +P S PPK+ + + + D S+A R RRE+ISER++ILQ
Sbjct: 123 KTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQD 182
Query: 197 LVPGGTK-MDTASMLDEAIHYVKFLKTQVQ----SLERAAANRPAGI-GFPA 242
LVPG K + A +LDE I+Y++ L+ QV+ LE + +GI GFP+
Sbjct: 183 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPS 234
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 237
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A+
Sbjct: 348 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYMPP 407
Query: 238 IGFPATLTTGNYP 250
+ FP + G+YP
Sbjct: 408 VMFPPGM--GHYP 418
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF--LKTQVQSLERAA 231
DP S+A R RRE+IS+R++ LQ LVP K D ASML+E I Y+KF L+T+V S+ R
Sbjct: 291 DPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQLQTKVLSMSRLG 350
Query: 232 A 232
A
Sbjct: 351 A 351
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 467 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLFM 526
Query: 236 AGIGFPATLTTGNYPPI 252
+ FP + N P I
Sbjct: 527 PPMMFPGAMAPMNTPHI 543
>gi|255586237|ref|XP_002533773.1| DNA binding protein, putative [Ricinus communis]
gi|223526310|gb|EEF28618.1| DNA binding protein, putative [Ricinus communis]
Length = 288
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
QS+AAR RR +I+ER + L +L+PGG KM+TA ML A +YVKFL+ QV LE
Sbjct: 166 QSIAARERRRKITERTQELGKLIPGGNKMNTAEMLQSASNYVKFLQAQVGILE 218
>gi|358347412|ref|XP_003637751.1| LAX [Medicago truncatula]
gi|355503686|gb|AES84889.1| LAX [Medicago truncatula]
Length = 298
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 7/75 (9%)
Query: 161 VKPPKRRNVKISKD-------PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 213
V+PP KI K QS+AAR RR +I+E+ + L +LVPGG KM+TA ML+ A
Sbjct: 146 VEPPFAATSKIEKKVTERTISSQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLNAA 205
Query: 214 IHYVKFLKTQVQSLE 228
+YVKFL+ QV L+
Sbjct: 206 ANYVKFLQAQVGMLQ 220
>gi|449493201|ref|XP_004159220.1| PREDICTED: uncharacterized protein LOC101232790 [Cucumis sativus]
Length = 312
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 41/54 (75%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
P+S AR RR+++S++ R LQ+L+P KMD A+ML+EA YVKFL+ Q+ +L+
Sbjct: 180 PRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 233
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 12/112 (10%)
Query: 143 ETIFRVAAMQPIHIDPDSVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQR 196
+T ++ +P+ +P S PPK+ + + + D S+A R RRE+ISER++ILQ
Sbjct: 54 KTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQD 113
Query: 197 LVPGGTK-MDTASMLDEAIHYVKFLKTQVQ----SLERAAANRPAGI-GFPA 242
LVPG K + A +LDE I+Y++ L+ QV+ LE + +GI GFP+
Sbjct: 114 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPS 165
>gi|17027282|gb|AAL34136.1|AC090713_23 putative transcription factor [Oryza sativa Japonica Group]
gi|108711234|gb|ABF99029.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125588017|gb|EAZ28681.1| hypothetical protein OsJ_12693 [Oryza sativa Japonica Group]
Length = 310
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 51/63 (80%), Gaps = 3/63 (4%)
Query: 163 PPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKT 222
P +RR+ I+ QS+ AR RRERI+ R+RILQ+LVP GTK+D ++ML+EA+HYVKFL+
Sbjct: 211 PARRRSATIA---QSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQL 267
Query: 223 QVQ 225
Q++
Sbjct: 268 QIK 270
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 146 FRVAAMQPIHIDP---DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGT 202
R +++ + +D DSV R + P+S+A R RR RIS+RIR LQ LVP
Sbjct: 148 LRASSLIEMEMDKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMD 207
Query: 203 KM-DTASMLDEAIHYVKFLKTQVQSL 227
K +TA MLDEA+ YVKFL+ Q+Q L
Sbjct: 208 KQTNTADMLDEALAYVKFLQRQIQEL 233
>gi|218193803|gb|EEC76230.1| hypothetical protein OsI_13645 [Oryza sativa Indica Group]
Length = 291
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 51/63 (80%), Gaps = 3/63 (4%)
Query: 163 PPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKT 222
P +RR+ I+ QS+ AR RRERI+ R+RILQ+LVP GTK+D ++ML+EA+HYVKFL+
Sbjct: 192 PARRRSATIA---QSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQL 248
Query: 223 QVQ 225
Q++
Sbjct: 249 QIK 251
>gi|224061589|ref|XP_002300555.1| predicted protein [Populus trichocarpa]
gi|222847813|gb|EEE85360.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 218
+S+ K+ + +S QS+AAR RR +I+E+ + L +L+PGG KM+TA M A YVK
Sbjct: 155 ESLMDSKKPSTGVSLSAQSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASKYVK 214
Query: 219 FLKTQVQSLE 228
FL+ Q+ LE
Sbjct: 215 FLQAQIGILE 224
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 158 PDSVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASML 210
P +PPK+ + + + D S+A R RRE+ISER++ILQ LVPG KM A +L
Sbjct: 106 PSESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVL 165
Query: 211 DEAIHYVKFLKTQVQ--SLERAAAN-----RPAGIGFPATLTTGNYPPIIGKEYQQPAVR 263
DE I+Y++ L+ QV+ S++ A N P GFP+ I G Y+ A R
Sbjct: 166 DEIINYIQSLQHQVEFLSMKLEAVNSRANMNPTNEGFPSKDVVTQPFDIAGVIYESHAAR 225
>gi|346682821|gb|AEO45564.1| abscisic acid-responsive protein bHLH2 [Populus koreana]
Length = 297
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 218
+S+ K+ + +S QS+AAR RR +I+E+ + L +L+PGG KM+TA M A YVK
Sbjct: 154 ESLMDSKKPSTGVSLSAQSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASKYVK 213
Query: 219 FLKTQVQSLE 228
FL+ Q+ LE
Sbjct: 214 FLQAQIGILE 223
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM------DTASMLDEAIHYVKFLKTQ 223
DP S+A R RRERI+ER++ LQ LVP K+ D ASMLDE I YVKFL+ Q
Sbjct: 294 DPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKFLQLQ 349
>gi|225444197|ref|XP_002270265.1| PREDICTED: transcription factor bHLH52-like [Vitis vinifera]
Length = 283
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
SV+ ++ + S QS+AAR RR +I+E+ + L +L+PGG KM+TA M A YVK+
Sbjct: 145 SVESSGKKGCRESLSAQSIAARQRRRKITEKTQELGKLIPGGNKMNTAEMFQAAFKYVKY 204
Query: 220 LKTQVQSLE 228
L+ QV L+
Sbjct: 205 LQAQVAILQ 213
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ+LVPG K+ A MLDE I+YV+FL+ QV+ L
Sbjct: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RIS+RIR LQ LVP K +TA MLDEA+ YV
Sbjct: 112 DSVPCKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYV 171
Query: 218 KFLKTQVQSL 227
KFL+ Q++ L
Sbjct: 172 KFLQNQIEEL 181
>gi|224117892|ref|XP_002317694.1| predicted protein [Populus trichocarpa]
gi|222860759|gb|EEE98306.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
SV K+ + +S QS+AAR RR +I+E+ R L + +PGG KM+TA M A YVKF
Sbjct: 157 SVMNSKKPSTGVSLSTQSIAARERRRKITEKTRELGKFIPGGHKMNTAEMFQAASKYVKF 216
Query: 220 LKTQVQSLERAAANR 234
L+ Q+ LE + +
Sbjct: 217 LQAQIGILELMGSTQ 231
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RIS+RIR LQ LVP K +TA ML+EA+ YV
Sbjct: 177 DSVLCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYV 236
Query: 218 KFLKTQVQSL 227
KFL+ Q+Q L
Sbjct: 237 KFLQKQIQEL 246
>gi|222619489|gb|EEE55621.1| hypothetical protein OsJ_03959 [Oryza sativa Japonica Group]
Length = 166
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 36/41 (87%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASML 210
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDTA+++
Sbjct: 12 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTAALV 52
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+Y
Sbjct: 244 PDYIHVRARRGQ--ATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 301
Query: 217 VKFLKTQVQ--SLERAAANRPAGIG---------FPATLTTGNYPPIIG 254
V+ L+ QV+ S++ AA N FP + T N+P + G
Sbjct: 302 VQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANFPSVGG 350
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+Y
Sbjct: 244 PDYIHVRARRGQ--ATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 301
Query: 217 VKFLKTQVQ--SLERAAANRPAGIG---------FPATLTTGNYPPIIG 254
V+ L+ QV+ S++ AA N FP + T N+P + G
Sbjct: 302 VQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANFPSVGG 350
>gi|296089224|emb|CBI38996.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
SV+ ++ + S QS+AAR RR +I+E+ + L +L+PGG KM+TA M A YVK+
Sbjct: 126 SVESSGKKGCRESLSAQSIAARQRRRKITEKTQELGKLIPGGNKMNTAEMFQAAFKYVKY 185
Query: 220 LKTQVQSLE 228
L+ QV L+
Sbjct: 186 LQAQVAILQ 194
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 156 IDPDSVKPPKRRNVKISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 213
ID SVKP R+ K ++ + +++ + RR RI+E+++ LQ L+P +K D ASMLDEA
Sbjct: 121 IDEMSVKPAPPRSSKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEA 180
Query: 214 IHYVKFLKTQVQSL 227
I Y+K L+ QVQ L
Sbjct: 181 IEYLKLLQLQVQGL 194
>gi|294460878|gb|ADE76012.1| unknown [Picea sitchensis]
Length = 171
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 42/51 (82%)
Query: 171 ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
+S DPQS+AARHRR +I +R +ILQ +VPGG MDT SMLDEAI YVKFL+
Sbjct: 37 LSMDPQSIAARHRRHKIRKRFKILQSMVPGGKNMDTVSMLDEAIQYVKFLQ 87
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
R RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L + AG+
Sbjct: 152 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAGM 209
>gi|356540613|ref|XP_003538782.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 349
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 237
+A R RRE++S+R L ++PG KMD AS+L +AI YVK L+ +VQ+LE AA R AG
Sbjct: 182 IAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIKYVKQLQERVQTLEEQAAKRTAG 241
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 462 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGA 515
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 165 KRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+RR ++ +++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ Q+
Sbjct: 276 RRRAAEV----HNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQL 331
Query: 225 QSLERAAANRPAGIGFPA 242
Q + P + FPA
Sbjct: 332 QMMWMGGGMAPRAVMFPA 349
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 165 KRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+RR ++ +++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ Q+
Sbjct: 267 RRRAAEV----HNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQL 322
Query: 225 QSLERAAANRPAGIGFPA 242
Q + P + FPA
Sbjct: 323 QMMWMGGGMAPPAVMFPA 340
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
P+S+A R RR RIS+RIR LQ LVP K +TA ML+EA+ YVKFL+ Q+Q L
Sbjct: 198 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQIQEL 251
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 165 KRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+RR ++ +++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ Q+
Sbjct: 267 RRRAAEV----HNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQL 322
Query: 225 QSLERAAANRPAGIGFPA 242
Q + P + FPA
Sbjct: 323 QMMWMGGGMAPPAVMFPA 340
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAG 382
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAG 382
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 164 PKRRNVKISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
P R + K S+ + +++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+
Sbjct: 175 PSRSSTKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 234
Query: 222 TQVQSLERAAANRPAGIGFPATLTTGNYPPII 253
QVQ L + A + P L + P I
Sbjct: 235 LQVQMLSMKSGINLAPMCMPGQLQSMQLPQIC 266
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAG 382
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 464 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAG 518
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAG 382
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAG 382
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 378 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAG 432
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK--MDTASMLDEAIHY 216
D+V R + P+S+A R RR RISER+R LQ LVP K ++ A MLDEA+ Y
Sbjct: 462 DAVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEY 521
Query: 217 VKFLKTQVQSLERAAANR 234
VK L+ QVQ L A NR
Sbjct: 522 VKSLQKQVQEL---AENR 536
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P PP RR+ S D + + R RR+RI+E++R LQ L+P TK D SMLDEAI Y+
Sbjct: 8 PRRATPPTRRSR--SADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYL 65
Query: 218 KFLKTQVQSL 227
K L+ Q+Q L
Sbjct: 66 KSLQLQLQML 75
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
+++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 473 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAG 529
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 119 GAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSV 178
G G SNS PL+ + +M T +AAM+ DSV R + P+S+
Sbjct: 294 GGGHSNS----PLAHQ----LSMPNTSSEMAAMEKFLHFSDSVPMKIRAKRGCATHPRSI 345
Query: 179 AARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
A R RR +ISER+R LQ LVP K +TA MLD A+ Y+K L+ Q Q L+ A
Sbjct: 346 AERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQAQKLQDCQA 400
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 472 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAG 526
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIG 239
RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L + A +G
Sbjct: 142 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVG 198
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 296
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 154 IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDE 212
I + DSV R + P+S+A R RR RIS+RIR LQ LVP K +TA MLDE
Sbjct: 70 IFMLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDE 129
Query: 213 AIHYVKFLKTQVQSL 227
A+ YVKFL+ Q++ L
Sbjct: 130 AVAYVKFLQKQIEEL 144
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 251 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 295
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A
Sbjct: 442 LSERKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAG 496
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 12/95 (12%)
Query: 160 SVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDE 212
+ +PPK+ + + + D S+A R RRE+ISER+++LQ LVPG K + AS+LDE
Sbjct: 115 AAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDE 174
Query: 213 AIHYVKFLKTQVQ--SLERAAANRPAGIG---FPA 242
I+Y++ L+ QV+ S++ A N A G FPA
Sbjct: 175 IINYIQSLQCQVEFLSMKLEAVNAQANQGVEVFPA 209
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 148 VAAMQPIHIDP---DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM 204
++ M +++D DSV R + P+S+A R RR RIS+RIR LQ LVP K
Sbjct: 161 ISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQ 220
Query: 205 -DTASMLDEAIHYVKFLKTQVQSL 227
+TA ML+EA+ YVK L++Q+Q L
Sbjct: 221 TNTADMLEEAVEYVKALQSQIQEL 244
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ + + P
Sbjct: 271 HNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMGSGMAP 330
Query: 236 AGIGFPA 242
+ FP
Sbjct: 331 PAVMFPG 337
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
RRERI+ER++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 296
>gi|326501126|dbj|BAJ98794.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+A R RRE++SER L ++VPG KMD AS+L +AI YVK L+ QV+ +E A RP
Sbjct: 168 LAERKRREKLSERFIALSKIVPGLKKMDKASVLGDAIKYVKTLQEQVKGMEEVARRRP 225
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RIS+RIR LQ +VP K +TA ML+EA+ YV
Sbjct: 162 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYV 221
Query: 218 KFLKTQVQSL 227
KFL+ Q+Q L
Sbjct: 222 KFLQKQIQEL 231
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 80 SNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMA 139
S+ LS+ N S++ T + S P S S R AGD S +
Sbjct: 10 SSFLSSRNFSMSSWDDTNSIMFSPP---SSSKKARVAAAAAGDHGDDMVSSFSNIDSQFG 66
Query: 140 AMRETIFRVAAMQP-IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLV 198
+++ +A M + + PDSV R + P+S+A R RR RIS+R++ LQ LV
Sbjct: 67 LSKQSSLEMAGMDDFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLV 126
Query: 199 PGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
P K +T+ MLD A+ Y+K L+ QV+ L+ AN
Sbjct: 127 PNMDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQAN 162
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RIS+RIR LQ LVP K +TA ML+EA+ YV
Sbjct: 99 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYV 158
Query: 218 KFLKTQVQSL 227
KFL+ ++Q L
Sbjct: 159 KFLQQKIQEL 168
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Query: 165 KRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+RR ++ +++ R RR+RI+E++R LQ LVP K D ASMLDEAI Y+K L+ Q+
Sbjct: 235 RRRAAQV----HNLSERRRRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKSLQLQL 290
Query: 225 QSLERAAANR--PAGIGFPA 242
Q + A R PA + FPA
Sbjct: 291 QVM-WAMGGRMAPAPVMFPA 309
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ
Sbjct: 333 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQ 380
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RIS+RIR LQ LVP K +TA ML+EA+ YV
Sbjct: 169 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYV 228
Query: 218 KFLKTQVQSL 227
KFL+ ++Q L
Sbjct: 229 KFLQQKIQEL 238
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA----- 232
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ +
Sbjct: 469 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGTGLCMPP 528
Query: 233 -NRPAGIGFPATLTTGNYPP 251
P G+ G++PP
Sbjct: 529 MMLPTGMQHIHAAHMGHFPP 548
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG +K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 214
Query: 231 AAN 233
A+N
Sbjct: 215 ASN 217
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG +K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 214
Query: 231 AAN 233
A+N
Sbjct: 215 ASN 217
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
P+S+A R+RR RISER++ LQ LVP K +TA MLDEA+ YVK L+TQV+ L
Sbjct: 25 PRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQVKDL 78
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 6/68 (8%)
Query: 167 RNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ- 225
RN K+ +++ R RR++I+E+IR L+ L+P KMD ASMLD+AI Y+K LK Q+Q
Sbjct: 208 RNAKV----HNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQI 263
Query: 226 -SLERAAA 232
S+ RA
Sbjct: 264 MSMGRALC 271
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 6/68 (8%)
Query: 167 RNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ- 225
RN K+ +++ R RR++I+E+IR L+ L+P KMD ASMLD+AI Y+K LK Q+Q
Sbjct: 208 RNAKV----HNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQI 263
Query: 226 -SLERAAA 232
S+ RA
Sbjct: 264 MSMGRALC 271
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 132 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 191
Query: 232 ANRPAGIGFPATLTTGNYPPIIGKEYQQ 259
+ P GF + G + IG +Q+
Sbjct: 192 SMSPVLYGFGMD-SDGLHDQKIGGMFQE 218
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 140 AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 199
++ +T + M+ + PDSV R + P+S+A R RR RISER+R LQ LVP
Sbjct: 269 SLPKTSAEMITMEKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 328
Query: 200 GGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
K +TA MLD A+ Y+K L+ Q ++L AN
Sbjct: 329 HMDKQTNTADMLDLAVEYIKDLQKQFKTLSEKRAN 363
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 163 PPKRRNVKISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
PP R + K S+ + +++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L
Sbjct: 10 PPARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKML 69
Query: 221 KTQVQSL 227
+ Q+Q L
Sbjct: 70 QLQLQVL 76
>gi|125545578|gb|EAY91717.1| hypothetical protein OsI_13359 [Oryza sativa Indica Group]
Length = 359
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+A R RRE++S+R L ++VPG KMD AS+L +AI YVK L+ QV+ LE A RP
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRP 241
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 98 AQGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHID 157
AQ +S P + S E ++ +G + SS G +S+ A R A Q
Sbjct: 33 AQPSSPPKSTNVSSAETFFPSVSGGAVSSVGYGVSETGQDKYAFEHK--RSGAKQ----- 85
Query: 158 PDSVKPPKRRNVKISKDPQ--SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
R ++K S D Q +++ + RR +I+E+++ LQ+L+P K D ASMLDEAI
Sbjct: 86 --------RNSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIE 137
Query: 216 YVKFLKTQVQSL 227
Y+K L+ QVQ+L
Sbjct: 138 YLKQLQLQVQTL 149
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ
Sbjct: 452 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQ 501
>gi|242038015|ref|XP_002466402.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
gi|241920256|gb|EER93400.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
Length = 292
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 48/54 (88%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER++ILQ+LVP GTK+D ++ML+EA+HYV+FL+ Q++ L
Sbjct: 212 DPQSLYARRRRERINERLKILQKLVPNGTKVDISTMLEEAVHYVRFLQQQIKML 265
>gi|115455061|ref|NP_001051131.1| Os03g0725800 [Oryza sativa Japonica Group]
gi|41469283|gb|AAS07165.1| putative symbiotic ammonium transport protein [Oryza sativa
Japonica Group]
gi|50428739|gb|AAT77090.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108710844|gb|ABF98639.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549602|dbj|BAF13045.1| Os03g0725800 [Oryza sativa Japonica Group]
gi|215767830|dbj|BAH00059.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 359
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+A R RRE++S+R L ++VPG KMD AS+L +AI YVK L+ QV+ LE A RP
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRP 241
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 80 SNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMA 139
S+ LS+ N S++ T + S P S S R AGD S +
Sbjct: 73 SSFLSSRNFSMSSWDDTNSIMFSPP---SSSKKARVAAAAAGDHGDDMVSSFSNIDSQFG 129
Query: 140 AMRETIFRVAAMQP-IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLV 198
+++ +A M + + PDSV R + P+S+A R RR RIS+R++ LQ LV
Sbjct: 130 LSKQSSLEMAGMDDFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLV 189
Query: 199 PGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
P K +T+ MLD A+ Y+K L+ QV+ L+ AN
Sbjct: 190 PNMDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQAN 225
>gi|356495525|ref|XP_003516627.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 396
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 237
+A R RRE IS+R L ++PG KMD AS+L +A+ YVK L+ +VQ+LE AA R G
Sbjct: 173 IAERKRRENISKRFIALSAILPGLKKMDKASVLGDAVKYVKQLQERVQTLEEQAAKRTLG 232
Query: 238 IG 239
G
Sbjct: 233 SG 234
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ +
Sbjct: 319 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 368
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 142 RETIFRVAAMQP-IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPG 200
+++ +A M + + PDSV R + P+S+A R RR RIS+R++ LQ LVP
Sbjct: 285 KQSSLEMAGMDDFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPN 344
Query: 201 GTKM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
K +T+ MLD A+ Y+K L+ QV+ L+ AN
Sbjct: 345 MDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQAN 378
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 142 RETIFRVAAMQP-IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPG 200
+++ +A M + + PDSV R + P+S+A R RR RIS+R++ LQ LVP
Sbjct: 285 KQSSLEMAGMDDFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPN 344
Query: 201 GTKM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
K +T+ MLD A+ Y+K L+ QV+ L+ AN
Sbjct: 345 MDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQAN 378
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 163 PPKRRNVKISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
PP R + K S+ + +++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L
Sbjct: 10 PPARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKML 69
Query: 221 KTQVQSL 227
+ Q+Q L
Sbjct: 70 QLQLQVL 76
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ +
Sbjct: 391 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 440
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG +K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 162 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 221
Query: 231 AAN 233
A+N
Sbjct: 222 ASN 224
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ +
Sbjct: 359 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 408
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ +
Sbjct: 188 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 237
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ +
Sbjct: 391 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 440
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 154 IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDT-ASMLDE 212
+HI DSV R + P+S+A R RR RIS +++ LQ LVP K + A MLD
Sbjct: 197 LHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDL 256
Query: 213 AIHYVKFLKTQVQSLERAAANRPAGI 238
A+ ++K L+TQVQ L + N G
Sbjct: 257 AVQHIKGLQTQVQKLHKEMENCTCGC 282
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ +
Sbjct: 169 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 218
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG +K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 211
Query: 231 AAN 233
A+N
Sbjct: 212 ASN 214
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 134 DSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 193
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 194 SMSPVLYGF 202
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Query: 167 RNVKISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
R++K S+ + +++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QV
Sbjct: 399 RSMKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQV 458
Query: 225 QSL 227
Q +
Sbjct: 459 QMM 461
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG +K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 211
Query: 231 AAN 233
A+N
Sbjct: 212 ASN 214
>gi|449435928|ref|XP_004135746.1| PREDICTED: uncharacterized protein LOC101220022 [Cucumis sativus]
gi|449515945|ref|XP_004165008.1| PREDICTED: uncharacterized protein LOC101226994 [Cucumis sativus]
Length = 308
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
Q++AAR RR +I+ + + L LVPGG+KM+TA ML+ A YVKFL+ QV L+
Sbjct: 189 QTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ 241
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 159 DSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 218
Query: 231 AAN 233
AAN
Sbjct: 219 AAN 221
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 218
D+ KP R + + +++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K
Sbjct: 5 DTKKPATRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLK 64
Query: 219 FLKTQVQ 225
L+ Q+Q
Sbjct: 65 MLQLQLQ 71
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG +K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 211
Query: 231 AAN 233
A+N
Sbjct: 212 ASN 214
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 70 SPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSY--SPNERYWRGGAGDSNSST 127
SP + S SF + + +S + L+ S ++ P Y S+ SP + G D + +
Sbjct: 165 SPRLKSQLSFPSRIPSSLSMLSQISEIGSESIGFP-YGSWNDSPFSENFNGMKRDPDDN- 222
Query: 128 GVPLSQKQNS------------MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDP 175
G P S QN ++ + ++ VA + +H DSV R + P
Sbjct: 223 GKPFSAAQNGELGNRVHLLSHHLSLPKASVDMVAMEKFLHFQ-DSVPCKIRAKRGCATHP 281
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
+S+A R RR RISER+R LQ LVP K +TA MLD A+ Y+K L+ Q ++L AN
Sbjct: 282 RSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTLSDNRAN 340
>gi|222625712|gb|EEE59844.1| hypothetical protein OsJ_12417 [Oryza sativa Japonica Group]
Length = 201
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPA 236
+A R RRE++S+R L ++VPG KMD AS+L +AI YVK L+ QV+ LE A RP
Sbjct: 26 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRPV 84
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ +
Sbjct: 459 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 508
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ +
Sbjct: 447 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 496
>gi|356536103|ref|XP_003536579.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 352
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQSV AR RRERI+ER++ILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 269 DPQSVYARRRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 322
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 9/92 (9%)
Query: 160 SVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDE 212
+ +PPK+ + + + D S+A R RRE+ISER+++LQ LVPG K + AS+LDE
Sbjct: 113 AAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDE 172
Query: 213 AIHYVKFLKTQVQ--SLERAAANRPAGIGFPA 242
I+Y++ L+ QV+ S++ A N A G A
Sbjct: 173 IINYIQSLQCQVEFLSMKLEAVNAHANQGVEA 204
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQRLVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 181 DSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 235
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 131 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 190
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 191 SMSPVLYGF 199
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN--RP 235
++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ + +A P
Sbjct: 340 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAP 399
Query: 236 AGIGFPAT 243
+ FP
Sbjct: 400 PAVMFPGV 407
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN--RP 235
++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ + +A P
Sbjct: 340 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAP 399
Query: 236 AGIGFPAT 243
+ FP
Sbjct: 400 PAVMFPGV 407
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 163 PPKRRNVKISKDPQ--SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
PP R + K S+ + +++ + RR +I+E+++ LQ L+P K D ASMLDEAI Y+K L
Sbjct: 81 PPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQL 140
Query: 221 KTQVQSLERAAANRPAGIGFPATLTTGNYPPII 253
+ QVQ L R P +L+ G+ PP +
Sbjct: 141 QLQVQMLMV----RNGYSLHPMSLSGGSRPPTM 169
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASM-LDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ +M LDE I+YV+ L+ QV+ L R A
Sbjct: 140 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLSMRIA 199
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 200 SMSPVLYGF 208
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 118 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 177
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 178 SLSPVLYGF 186
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 232
Query: 231 AAN 233
A+N
Sbjct: 233 ASN 235
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 135 QNSMA---AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERI 191
QN +A ++ +T +AA++ D+V R + P+S+A R RR RISERI
Sbjct: 267 QNGLAHQFSLPKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERI 326
Query: 192 RILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
R LQ LVP K +TA MLD A+ Y+K L+ QV+ + + AN
Sbjct: 327 RKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESRAN 369
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 12/100 (12%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ S++
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 204
Query: 231 AANRPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGALHYG 270
A N G +PP KE+ Q A N + +G
Sbjct: 205 AVNSRMNPGIEV------FPP---KEFGQQAFENPEIQFG 235
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
R RR++I++R++ LQ+LVP +K D ASMLDE I Y+K L+ QVQ + R
Sbjct: 293 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSR 341
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 154 IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDE 212
+ + DSV R + P+S+A R RR RIS+R++ LQ LVP K +T+ MLD
Sbjct: 141 LQLQQDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDL 200
Query: 213 AIHYVKFLKTQVQSLERAAAN 233
A+ Y+K LK QV+ L+ AN
Sbjct: 201 AVEYIKELKDQVEKLKHDQAN 221
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 120 DNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 179
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 180 SLSPVLYGF 188
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 232
Query: 231 AAN 233
A+N
Sbjct: 233 ASN 235
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 120 DNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 179
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 180 SLSPVLYGF 188
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RIS+RIR LQ LVP K +TA ML+EA+ YV
Sbjct: 180 DSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYV 239
Query: 218 KFLKTQVQSL 227
K L+ Q+Q L
Sbjct: 240 KVLQRQIQEL 249
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 12/100 (12%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ S++
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 204
Query: 231 AANRPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGALHYG 270
A N G +PP KE+ Q A N + +G
Sbjct: 205 AVNSRMNPGIEV------FPP---KEFGQQAFENPEIQFG 235
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER+++LQRLVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 156 DSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLA 215
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RIS+RIR LQ LVP K +TA ML+EA+ YV
Sbjct: 178 DSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYV 237
Query: 218 KFLKTQVQSL 227
K L+ Q+Q L
Sbjct: 238 KVLQRQIQEL 247
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG +K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 214
Query: 231 AAN 233
A+N
Sbjct: 215 ASN 217
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 170 DSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 229
Query: 231 AAN 233
A+N
Sbjct: 230 ASN 232
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRERISER+R LQ LVPG +K+ A MLDE I+YV+ L+ QV+ AAA
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEVNGTAAA 214
>gi|239051052|ref|NP_001132631.2| uncharacterized protein LOC100194106 [Zea mays]
gi|238908727|gb|ACF81557.2| unknown [Zea mays]
gi|414872549|tpg|DAA51106.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 364
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+A R RRE++S+R L ++VPG KMD AS+L +AI YVK L+ QV+ LE A RP
Sbjct: 189 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRP 246
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 11/91 (12%)
Query: 165 KRRNVKISKDPQ--SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKT 222
+R ++K + D Q +++ + RR +I+E+++ LQ+L+P K D ASMLDEAI Y+K L+
Sbjct: 84 QRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQL 143
Query: 223 QVQSLERAAANRPAGIGFPATLTTGNYPPII 253
QVQ+L A N G+G L PP++
Sbjct: 144 QVQTL--AVMN---GLG----LNPMQLPPVL 165
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 22/115 (19%)
Query: 164 PKRRNVKISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
P R + K S+ + +++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+
Sbjct: 130 PLRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 189
Query: 222 TQVQSLERAAANRPAGIGFPATLTTGNYPPI--------IGKEYQQPAVRNGALH 268
QVQ L + G+ G PP+ IG+E NG+LH
Sbjct: 190 LQVQML-----SMRNGLSLHPMCLPGVLPPVQLSQMRIGIGEE-------NGSLH 232
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER+++LQRLVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 173 DSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLA 232
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-------MDTASMLD 211
DSV R + P+S+A R RR RISER+R LQ LVP K +T+ MLD
Sbjct: 410 DSVPCRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLD 469
Query: 212 EAIHYVKFLKTQVQSLERA 230
EA+ Y+KFL+ QV L+
Sbjct: 470 EAVEYMKFLQKQVDDLQEC 488
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 143 ETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGT 202
+T +AA++ D+V R + P+S+A R RR RISERIR LQ LVP
Sbjct: 300 KTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMD 359
Query: 203 KM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
K +TA MLD A+ Y+K L+ QV+ L + AN
Sbjct: 360 KQTNTADMLDLAVDYIKDLQKQVKGLNDSRAN 391
>gi|226529722|ref|NP_001147789.1| symbiotic ammonium transporter [Zea mays]
gi|195613768|gb|ACG28714.1| symbiotic ammonium transporter [Zea mays]
Length = 359
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+A R RRE++S+R L ++VPG KMD AS+L +AI YVK L+ QV+ LE A RP
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRP 241
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PDSV R + P+S+A R RR RISER+R LQ LVP K +TA MLD A+ Y
Sbjct: 293 PDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEY 352
Query: 217 VKFLKTQVQSLERAAA 232
+K L+ Q ++L A
Sbjct: 353 IKDLQKQFKTLSEKRA 368
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 98 AQGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHID 157
AQ +S P + S E ++ +G + SS G +S+ A R A Q
Sbjct: 33 AQPSSPPKSTNVSSAETFFPSVSGGAVSSVGYGVSETGQDKYAFEHK--RSGAKQ----- 85
Query: 158 PDSVKPPKRRNVKISKDPQ--SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
R ++K + D Q +++ + RR +I+E+++ LQ+L+P K D ASMLDEAI
Sbjct: 86 --------RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIE 137
Query: 216 YVKFLKTQVQSL 227
Y+K L+ QVQ+L
Sbjct: 138 YLKQLQLQVQTL 149
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER++ LQ LVPG +K M AS LDE I+YV+ L+ QV+ S++ A
Sbjct: 141 DSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFLSMKLA 200
Query: 231 AA 232
AA
Sbjct: 201 AA 202
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 11/91 (12%)
Query: 165 KRRNVKISKDPQ--SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKT 222
+R ++K + D Q +++ + RR +I+E+++ LQ+L+P K D ASMLDEAI Y+K L+
Sbjct: 81 QRNSLKRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQL 140
Query: 223 QVQSLERAAANRPAGIGFPATLTTGNYPPII 253
QVQ+L A N G+G L PP++
Sbjct: 141 QVQTL--AVMN---GLG----LNPMRLPPVL 162
>gi|226501366|ref|NP_001148121.1| symbiotic ammonium transporter [Zea mays]
gi|195615934|gb|ACG29797.1| symbiotic ammonium transporter [Zea mays]
Length = 340
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+A R RRE++S+R L ++VPG KMD AS+L +AI YVK L+ QV+ LE A RP
Sbjct: 163 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRP 220
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 605 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQMM 651
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 147 RVAAMQPIHIDPDSV--KPPKRRN--VKISKDPQ--SVAARHRRERISERIRILQRLVPG 200
++ Q +P+ V + P R VK S++ Q ++ R RR++I++R+RIL+ L+P
Sbjct: 721 KITVTQENDEEPEDVVKEKPAREGTGVKRSRNAQVHNLCERKRRDKINKRMRILKELIPN 780
Query: 201 GTKMDTASMLDEAIHYVKFLKTQVQ 225
K D ASMLD+AI Y+K LK Q+Q
Sbjct: 781 CNKTDKASMLDDAIEYLKTLKLQIQ 805
>gi|357453543|ref|XP_003597049.1| Transcription factor bHLH117 [Medicago truncatula]
gi|355486097|gb|AES67300.1| Transcription factor bHLH117 [Medicago truncatula]
Length = 285
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
PQS AR RR+++SE+ R LQ+L+P +MD A++ +EA YVKFL+ Q+ L+
Sbjct: 146 PQSNLARQRRQKLSEKTRCLQKLMPWDKRMDQATLYEEAYKYVKFLQAQLSVLQ 199
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ---SLERAAA 232
+++ R RR+RI+E++R LQ L+P K+D ASML+EAI Y+K L+ QVQ S+ AAA
Sbjct: 274 HNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSSMGPAAA 333
Query: 233 NRPAGIGFPATLT 245
AG+ P L
Sbjct: 334 A--AGLCVPPMLA 344
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 98 AQGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHID 157
AQ +S P + S E ++ +G + SS G +S+ A R A Q
Sbjct: 33 AQPSSPPKSTNVSSAETFFPSVSGGAVSSVGYGVSETGQDKYAFEHK--RSGAKQ----- 85
Query: 158 PDSVKPPKRRNVKISKDPQ--SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
R ++K + D Q +++ + RR +I+E+++ LQ+L+P K D ASMLDEAI
Sbjct: 86 --------RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIE 137
Query: 216 YVKFLKTQVQSL 227
Y+K L+ QVQ+L
Sbjct: 138 YLKQLQLQVQTL 149
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 159 DSVKPPKRRNVKI---SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
D +P KR K + + +++ R RR+RI+E++R LQ LVP K D AS+LDEAI
Sbjct: 213 DETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIE 272
Query: 216 YVKFLKTQVQSLERAAANRPAGIGFPAT 243
Y+K L+ QVQ + P + FP T
Sbjct: 273 YLKSLQMQVQIMWMTTGIVP--MMFPGT 298
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 148 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 207
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 208 SMSPVLYGF 216
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 148 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 207
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 208 SMSPVLYGF 216
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 159 DSVKPPKRRNVKI---SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
D +P KR K + + +++ R RR+RI+E++R LQ LVP K D AS+LDEAI
Sbjct: 210 DETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIE 269
Query: 216 YVKFLKTQVQSLERAAANRPAGIGFPAT 243
Y+K L+ QVQ + P + FP T
Sbjct: 270 YLKSLQMQVQIMWMTTGIVP--MMFPGT 295
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 8/84 (9%)
Query: 165 KRRNVKISKDPQ--SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKT 222
+R ++K + D Q +++ + RR +I+E+++ LQ+L+P K D ASMLDEAI Y+K L+
Sbjct: 84 QRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQLQL 143
Query: 223 QVQSLERAAANRPAGIGF-PATLT 245
QVQ+L A N G+G P LT
Sbjct: 144 QVQTL--AVMN---GLGLNPMQLT 162
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 148 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 207
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 208 SMSPVLYGF 216
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 179 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
+ R RR++I++R++ LQ+LVP +K D ASMLDE I Y+K L+ QVQ + R
Sbjct: 278 SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMNR 328
>gi|413933203|gb|AFW67754.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 341
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+A R RRE++S+R L ++VPG KMD AS+L +AI YVK L+ QV+ LE A RP
Sbjct: 165 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRP 222
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASM-LDEAIHYVKFLKTQVQSL-ERAA 231
D S+A R RRE+ISER+++LQ LVPG K+ ++ LDE I+YVK L+ QV+ L + A
Sbjct: 117 DSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQNQVEFLVGKLA 176
Query: 232 ANRPAGIGFPATLTT 246
+ P IG A L +
Sbjct: 177 SISPMLIGHEANLDS 191
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+Y
Sbjct: 229 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 286
Query: 217 VKFLKTQVQ--SLERAAANRPAGIGFPATLTTGNYPPI 252
V+ L+ QV+ S++ AA N + +PP
Sbjct: 287 VQSLQRQVEFLSMKLAAVNPRLDFNIDNLIAKETFPPC 324
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 148 VAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DT 206
+AA++ D+V R + P+S+A R RR RISERIR LQ LVP K +T
Sbjct: 301 MAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNT 360
Query: 207 ASMLDEAIHYVKFLKTQVQSLERAAAN 233
A MLD A+ Y+K L+ QV+ L + AN
Sbjct: 361 ADMLDLAVDYIKDLQKQVKGLNDSRAN 387
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 116 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 175
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 176 SLSPVLYGF 184
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+R LQ LVPG K+ A MLDE I+YV+ L+TQV+ L
Sbjct: 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFL 199
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 163 PPKRRNVKISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
PP R + K S+ + +++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L
Sbjct: 115 PPPRSSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQL 174
Query: 221 KTQVQSL 227
+ QVQ L
Sbjct: 175 QLQVQYL 181
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 31/168 (18%)
Query: 122 DSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDS-------VKPPKRRNVKI--- 171
D +S+ GV S N+M + H +PPK+ + +
Sbjct: 88 DDDSAKGVSTSNDANAMNEGDNKRLKTGGSNENHESKAEGEETAKPAEPPKQDYIHVRAR 147
Query: 172 ---SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ-- 225
+ D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+
Sbjct: 148 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 207
Query: 226 SLERAAAN---RPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGALHYG 270
S++ A N P GFP+ KE+ QP + +G
Sbjct: 208 SMKLEAVNSRLSPGIEGFPS------------KEFGQPPYDPSGMAFG 243
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 159 DSVKPPKRRNVKI---SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
D +P KR K + + +++ R RR+RI+E++R LQ LVP K D AS+LDEAI
Sbjct: 214 DETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIE 273
Query: 216 YVKFLKTQVQSLERAAANRPAGIGFPAT 243
Y+K L+ QVQ + P + FP T
Sbjct: 274 YLKSLQMQVQIMWMTTGIVP--MMFPGT 299
>gi|10998404|gb|AAG25927.1|AF260918_1 anthocyanin 1 [Petunia x hybrida]
gi|10998406|gb|AAG25928.1|AF260919_1 anthocyanin 1 [Petunia x hybrida]
Length = 668
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 166 RRNVKISKDPQS----VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
R+ I+++ S +A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+
Sbjct: 462 RKGCSITQEEPSGNHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 521
Query: 222 TQVQSLERAAANRPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGALHYGDA 272
+VQ LE A A + T TG + G+ ++ + G++ G A
Sbjct: 522 KKVQDLEARANQTEATL---QTKDTGTVKVLQGRGKRRMKIVEGSVGGGQA 569
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 144 TIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK 203
T +AA++ DSV R + P+S+A R RR +ISER+R LQ LVP K
Sbjct: 319 TSAEMAAIEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDK 378
Query: 204 M-DTASMLDEAIHYVKFLKTQVQSL 227
+TA MLD A+ Y+K L+ QVQ+L
Sbjct: 379 QTNTADMLDLAVEYIKDLQNQVQTL 403
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRERISER+R LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 232
Query: 231 AAN 233
A+N
Sbjct: 233 ASN 235
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ--SLERAAANRPAGI 238
R RR+RI+E++R LQ L+P K+D ASML+EAI Y+K L+ QVQ S+ PA +
Sbjct: 271 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGLCMPPAAM 330
Query: 239 GFPA 242
PA
Sbjct: 331 LLPA 334
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
P RR+ S D + + R RR+RI+E++R LQ L+P TK D SMLDEAI Y+K L+ Q
Sbjct: 15 PTRRSR--SADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQ 72
Query: 224 VQSL 227
+Q L
Sbjct: 73 LQML 76
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 110 SPNERYWRGG--------------AGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIH 155
SP E ++ GG A +S GV + ++ E VA
Sbjct: 55 SPAELFFGGGGSSSLNYSDQGGYFAKESAERRGVSMENDLGDLSCDSEKGAEVA-----E 109
Query: 156 IDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
+ ++V+P + + +++ + RR RI+E+++ LQ L+P K D ASMLDEAI
Sbjct: 110 VPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIE 169
Query: 216 YVKFLKTQVQSL 227
Y+K L+ QVQ L
Sbjct: 170 YLKQLQLQVQML 181
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ----SLE 228
D S+A R RRE+ISER++ILQ LVPG K + AS+LDE I+Y++ L+ QV+ LE
Sbjct: 68 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLE 127
Query: 229 RAAANRPAGI-GFP 241
+ +GI GFP
Sbjct: 128 AVNSRTNSGIEGFP 141
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 161 VKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
V+PPK R + D S+A R RRERIS+R+++LQ LVPG K + A MLDE I
Sbjct: 195 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 215 HYVKFLKTQVQSL 227
+YV+ L+ QV+ L
Sbjct: 255 NYVQSLQRQVEFL 267
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 154 IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDE 212
+ + DSV R + P+S+A R RR RIS+R+R LQ LVP K +T+ MLD
Sbjct: 284 LQLQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDI 343
Query: 213 AIHYVKFLKTQVQSLERAAAN 233
A+ Y+K L+ Q++ L++ N
Sbjct: 344 AVDYIKVLQDQIEKLKQDQGN 364
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
R RR++I++R++ILQ+LVP +K D ASMLDE I Y+K L+ QV + R
Sbjct: 225 RKRRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSR 273
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 161 VKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
V+PPK R + D S+A R RRERIS+R+++LQ LVPG K + A MLDE I
Sbjct: 195 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 215 HYVKFLKTQVQSL 227
+YV+ L+ QV+ L
Sbjct: 255 NYVQSLQRQVEFL 267
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 161 VKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
V+PPK R + D S+A R RRERIS+R+++LQ LVPG K + A MLDE I
Sbjct: 195 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 215 HYVKFLKTQVQSL 227
+YV+ L+ QV+ L
Sbjct: 255 NYVQSLQRQVEFL 267
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S++ R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L R A
Sbjct: 114 DSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFLSMRIA 173
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 174 SLSPVVYGF 182
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPG-GTKMDTASMLDEAIHYV 217
DS+ R + P+S+A R RR +ISER+R LQ LVP T+ +TA MLD A+ Y+
Sbjct: 298 DSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYI 357
Query: 218 KFLKTQVQSLERAAA 232
K L+ QV++LE + A
Sbjct: 358 KDLQEQVKALEESRA 372
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 162 KPPKRRNV---KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 218
KPP++ + + +++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K
Sbjct: 303 KPPQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLK 362
Query: 219 FLKTQVQSL 227
L+ QVQ +
Sbjct: 363 TLQMQVQMM 371
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRERISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 246 SLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 297
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 148 VAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DT 206
+AA++ DSV R + P+S+A R RR +ISER+R LQ LVP K +T
Sbjct: 313 IAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNT 372
Query: 207 ASMLDEAIHYVKFLKTQVQSLERAAA 232
A MLD A+ Y+K L+ QVQ+L A
Sbjct: 373 ADMLDLAVDYIKDLQKQVQTLSDCHA 398
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERAAAN 233
S+A R RRE+ISER+++LQ LVPG TK+ A MLDE I+YV+ L+ QV+ S++ AA N
Sbjct: 186 SLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 245
Query: 234 RPAGIGFPATLT 245
G+ L+
Sbjct: 246 PQLGLNIKQLLS 257
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 154 IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDE 212
+ + DSV R + P+S+A R RR RIS+R++ LQ LVP K +T+ MLD
Sbjct: 269 LQLQQDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDL 328
Query: 213 AIHYVKFLKTQVQSLERAAAN 233
A+ Y+K LK QV+ L+ AN
Sbjct: 329 AVDYIKELKDQVEKLKHDQAN 349
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 162 KPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
+PPK+ + + + D S+A R RRE+ISER++ILQ LVPG K + AS+LDE I
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 215 HYVKFLKTQVQSL 227
+Y++ L+ QV+ L
Sbjct: 179 NYIQSLQHQVEFL 191
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 79 FSNMLSNSNTSL--NGTSITAAQGTSIPTYF-----------SYSPNERYWRGGAGDSNS 125
FS+ +S SL N TS+T Q T T +P +R + G NS
Sbjct: 68 FSHHDHSSKVSLSDNETSLTKKQSTGSSTVVDKLETGEQVTQEVTPVDRKRKTTNGSLNS 127
Query: 126 STG-----VPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAA 180
+ V +++ M++ R A++ + +P + R + D S+A
Sbjct: 128 AQSKDVKEVKSKRQKKCRGDMKQEEKRPKAVKKVPEEPPTGYVHVRARRGQATDSHSLAE 187
Query: 181 RHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLERAAAN 233
R RRE+ISER+++LQRLVPG K+ A MLDE I+YV+ L+ QV+ L A+
Sbjct: 188 RVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 241
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA-NR 234
+++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ + +
Sbjct: 333 HNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSGIAA 392
Query: 235 PAGIGFPAT 243
P + FP
Sbjct: 393 PPAVMFPGV 401
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASM-LDEAIHYVKFLKTQVQSL-ERAA 231
D S+A R RRE+ISER+++LQ LVPG K+ ++ LDE I+YVK L+ QV+ L + A
Sbjct: 117 DSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFLVGKLA 176
Query: 232 ANRPAGIGFPATLTT 246
+ P IG A L +
Sbjct: 177 SISPMLIGHEANLDS 191
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L + A
Sbjct: 173 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLA 232
Query: 232 ANRPA----GIGFPATLTTGNYPPIIGKEYQQPAVRNGA 266
+ P G+ A + + + G E Q P ++ +
Sbjct: 233 SLNPMYYDFGMDLDALMVRPDDQNLSGLETQLPNIQQAS 271
>gi|3127045|gb|AAC39455.1| bHLH transcription factor JAF13 [Petunia x hybrida]
Length = 628
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 237
++ R RRE+I+ER +L ++P G K+D S+LDE I Y+K L+ +VQ LE + RP
Sbjct: 441 ISERRRREKINERFMLLASMLPAGGKVDKISLLDETIEYLKELERRVQDLEAKSGRRPND 500
Query: 238 I 238
+
Sbjct: 501 V 501
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 148 VAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DT 206
VAA++ D+V R + P+S+A R RR +ISERIR LQ LVP K +T
Sbjct: 177 VAAIEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNT 236
Query: 207 ASMLDEAIHYVKFLKTQVQSL--ERAAANRPA 236
+ MLD A+ Y+K L+ QV++L RA+ PA
Sbjct: 237 SDMLDLAVDYIKDLQKQVKALNESRASCTCPA 268
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 17/88 (19%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA-------- 232
+ RR +I+ER++ LQ+LVPG +K + AS LD+ IHY+K L+ QVQ++ A
Sbjct: 202 KRRRHKINERLKTLQKLVPGCSKSNQASTLDQTIHYMKSLQQQVQAMSVGLAAPAVYPVV 261
Query: 233 -------NRPAGIGFPAT--LTTGNYPP 251
P + FPA + G +PP
Sbjct: 262 QPQCVPPGTPVAMPFPAAHPMVLGGHPP 289
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPG-GTKMDTASMLDEAIHYV 217
DS+ R + P+S+A R RR +ISER+R LQ LVP T+ +TA MLD A+ Y+
Sbjct: 297 DSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYI 356
Query: 218 KFLKTQVQSLERAAA 232
K L+ QV++LE A
Sbjct: 357 KDLQEQVKTLEETRA 371
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 374 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 423
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 164 PKRRNVKISKDPQ--SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
PK + K + PQ S++ R RR++I++++R LQ L+P K+D ASMLD+AI Y+K L+
Sbjct: 371 PKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQ 430
Query: 222 TQVQ 225
Q+Q
Sbjct: 431 LQLQ 434
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Query: 159 DSVKPPKRRN-VKISKDPQ--SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
D VK + N VK S++P+ +++ + RRE+I++++R L+ L+P K+D ASMLD+AI
Sbjct: 321 DMVKQDREGNRVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAID 380
Query: 216 YVKFLKTQVQS 226
Y+K LK Q+Q+
Sbjct: 381 YLKTLKLQLQA 391
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+++ R RR+RI+E++R LQ L+P K+D ASML+EAI Y+K L+ QVQ
Sbjct: 340 HNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQ 389
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+++ R RR+RI+E++R LQ L+P K+D ASML+EAI Y+K L+ QVQ
Sbjct: 340 HNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQ 389
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
R RR+RI+++++ LQ+LVP +K D ASMLDE I Y+K L+ QVQ++
Sbjct: 257 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAM 303
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRERISER++ILQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 183 DSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVEFLSMKLA 242
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+IS+R+++LQ LVPG K + A MLDE I+YV+ L+ QV+ L A
Sbjct: 279 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLA 338
Query: 233 NRPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGALHY 269
+ F N P ++ K+ QQ + + H+
Sbjct: 339 TVNPQLDF------NNLPNLLAKDMQQSCGQLQSSHF 369
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 126 STGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRE 185
+T PL+ + +M T +AA++ DSV R + P+S+A R RR
Sbjct: 320 TTSAPLAHQM----SMPNTTAELAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRT 375
Query: 186 RISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
+ISER+R LQ LVP K +T+ MLD A+ Y+K L+ QV++L
Sbjct: 376 KISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQVETL 418
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+++ + RRE+I++++R L+ L+P K+D ASMLD+AI Y+K LK Q+Q + P
Sbjct: 331 HNLSEKKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQLQIMSMGNGLWP 390
Query: 236 AGIGFPATLTTGNYPPIIGKEYQQPAV 262
+ PA T + P +G ++ P +
Sbjct: 391 L-MMLPAATTAHHMNPQLGMGFRPPQL 416
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR+RI+E+++ LQ+LVP +K D ASMLDE I Y+K L+ QVQ
Sbjct: 271 RRRRDRINEKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQ 315
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 367 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 416
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER+ ILQ LVPG K + AS+LDE I+Y++ L+ QV+ S++
Sbjct: 140 DSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLE 199
Query: 231 AAN---RPAGIGFP 241
A N P GFP
Sbjct: 200 AVNSQMNPGIEGFP 213
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 161 VKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
V+PPK R + D S+A R RRERIS+R+++LQ LVPG K + A MLDE I
Sbjct: 184 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 243
Query: 215 HYVKFLKTQVQSL 227
+YV+ L+ QV+ L
Sbjct: 244 NYVQSLQRQVEFL 256
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 162 DSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 216
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
P+S+A R RR RISERIR LQ LVP K +TA MLD A+ Y+K L+ QV+ L + AN
Sbjct: 79 PRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSRAN 138
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 159 DSVKPPKRRNVKI---SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
D +P KR K + + +++ R RR+RI+E++R LQ LVP K D AS+LDEAI
Sbjct: 389 DETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIE 448
Query: 216 YVKFLKTQVQ 225
Y+K L+ QVQ
Sbjct: 449 YLKSLQMQVQ 458
>gi|357117240|ref|XP_003560380.1| PREDICTED: transcription factor bHLH25-like [Brachypodium
distachyon]
Length = 349
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR 234
+A R RRE++SER L ++VPG KMD AS+L +AI YVK L+ QV+ +E +A R
Sbjct: 170 LAERKRREKLSERFIALSKIVPGLKKMDKASVLGDAIKYVKTLQDQVKGMEESARLR 226
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+Y
Sbjct: 251 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 308
Query: 217 VKFLKTQVQ--SLERAAAN 233
V+ L+ QV+ S++ AA N
Sbjct: 309 VQSLQRQVEFLSMKLAAVN 327
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 159 DSVKPPKRRNVKI---SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
D +P KR K + + +++ R RR+RI+E++R LQ LVP K D AS+LDEAI
Sbjct: 313 DETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIE 372
Query: 216 YVKFLKTQVQ 225
Y+K L+ QVQ
Sbjct: 373 YLKSLQMQVQ 382
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 42 NLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM 92
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ S++
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 204
Query: 231 AANRPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGALHYG 270
A N G +PP KE+ Q N + +G
Sbjct: 205 AVNSRMNPGIEV------FPP---KEFGQQTFENPEMQFG 235
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 140 AMRETIFRVAAMQPI-HIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLV 198
+M +T +A M+ + +I DSV R + P+S+A R RR RIS +++ LQ LV
Sbjct: 205 SMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELV 264
Query: 199 PGGTKMDT-ASMLDEAIHYVKFLKTQVQSLERA 230
P K + A MLD A+ ++K L+ QV+SLE+
Sbjct: 265 PNMDKQTSYADMLDLAVEHIKGLQHQVESLEKG 297
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGF 240
+ RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + +G+
Sbjct: 10 QRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMG-----SGLCI 64
Query: 241 PATL 244
P L
Sbjct: 65 PPML 68
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ R RR+RI+E++R LQ L+P K+D ASML+EAI Y+K L+ QVQ +
Sbjct: 125 NLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 175
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQRLVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 189 DSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLA 248
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 161 VKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
V+PPK R + D S+A R RRERIS+R++ LQ LVPG K + A MLDE I
Sbjct: 181 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEII 240
Query: 215 HYVKFLKTQVQSL 227
+YV+ L+ QV+ L
Sbjct: 241 NYVQSLQRQVEFL 253
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 154 IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDE 212
+ + DSV R + P+S+A R RR RIS+R+R LQ LVP K +T+ MLD
Sbjct: 289 LQLQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDI 348
Query: 213 AIHYVKFLKTQVQSLERAAAN 233
A+ Y+K L+ Q++ L++ N
Sbjct: 349 AVDYIKVLQDQIEKLKQDQGN 369
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
S + S++ + RR+RI++++R LQ L+P K+D S+LDEAI Y+K L+ QVQ + A
Sbjct: 384 SAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVMSMGA 443
Query: 232 ANRPAGIGFPATL 244
A + PA L
Sbjct: 444 GMCMAPVMIPAVL 456
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQRLVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 157 DSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLA 216
Query: 233 N 233
+
Sbjct: 217 S 217
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 148 VAAMQPIHIDP---DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM 204
V+ M +++D SV R + P+S+A R RR RIS+RIR LQ LVP K
Sbjct: 158 VSGMMDMNMDKLIEGSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQ 217
Query: 205 -DTASMLDEAIHYVKFLKTQVQSL 227
+TA ML+EA+ YVK L+ Q+Q L
Sbjct: 218 TNTADMLEEAVEYVKALQGQIQEL 241
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 9/93 (9%)
Query: 162 KPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAI 214
+PPK+ + + + D S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I
Sbjct: 7 EPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 66
Query: 215 HYVKFLKTQVQ--SLERAAANRPAGIGFPATLT 245
+YV+ L+ QV+ S++ AA N I LT
Sbjct: 67 NYVQSLQRQVEFLSMKLAAVNPRLDINLDGLLT 99
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 131 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVEFLSMKLA 190
Query: 231 AAN 233
A N
Sbjct: 191 AVN 193
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 394 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 453
Query: 233 NRPAGIGF-------------------PATLTTGNYPPIIGKEYQ-QPAVRN 264
+ + F P L + PP G+ Q PAV N
Sbjct: 454 SVNTRLDFSIESLISKDIFQSNNSLAHPIFLIDSSAPPFYGQHPQPNPAVHN 505
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 276 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 333
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ Q+Q
Sbjct: 744 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQ 788
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 144 TIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK 203
T +AA++ DSV R + P+S+A R RR +ISER+R LQ LVP K
Sbjct: 312 TSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDK 371
Query: 204 M-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
+TA MLD A+ Y+K L+ QVQ+L A
Sbjct: 372 QTNTADMLDLAVDYIKDLQKQVQTLSDCHA 401
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ LQ L+PG K+ A MLDE I+Y
Sbjct: 187 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINY 244
Query: 217 VKFLKTQVQSLERAAANRPAGIGF 240
V+ L+ QV+ L A G+ F
Sbjct: 245 VQSLQRQVEFLSMKLAAVNPGLDF 268
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ Q+Q
Sbjct: 33 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQ 77
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ ++
Sbjct: 264 NLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQRVQ 315
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASM-LDEAIHYVKFLKTQVQSL-ERAA 231
D S+A R RRE+ISER++ LQ LVPG K+ ++ LDE I+YVK L+ QV+ L + A
Sbjct: 117 DSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFLVGKLA 176
Query: 232 ANRPAGIGFPATLTT 246
+ P IG A L +
Sbjct: 177 SISPMLIGHEANLDS 191
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 148 VAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DT 206
VAA++ D+V R + P+S+A R RR +ISERIR LQ LVP K +T
Sbjct: 280 VAAIEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNT 339
Query: 207 ASMLDEAIHYVKFLKTQVQSL--ERAAANRPA 236
+ MLD A+ Y+K L+ QV++L RA+ PA
Sbjct: 340 SDMLDLAVDYIKDLQKQVKALNESRASCTCPA 371
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 140 AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 199
++ +T +AAM+ DSV R + P+S+A R RR RISER+R LQ LVP
Sbjct: 285 SLPKTSAEMAAMEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 344
Query: 200 GGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
K +TA MLD A+ Y+K L+ Q +L
Sbjct: 345 NMDKQTNTADMLDLAVEYIKDLQKQYNTL 373
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 162 KPPKRRNVKISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
KP R + K S+ + +++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K
Sbjct: 163 KPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQ 222
Query: 220 LKTQVQSL 227
L+ QVQ L
Sbjct: 223 LQLQVQML 230
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 140 AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 199
++ +T +AAM+ DSV R + P+S+A R RR RISER+R LQ LVP
Sbjct: 296 SLPKTSAEMAAMEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 355
Query: 200 GGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
K +TA MLD A+ Y+K L+ Q +L
Sbjct: 356 NMDKQTNTADMLDLAVEYIKDLQKQYNTL 384
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRE+ISER++ILQ+LVPG ++ A +LDE I+YV+ L+ QV+ L + A
Sbjct: 154 DSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQVEFLSMKLA 213
Query: 232 ANRPAGIGFPATLTT 246
+ P F L T
Sbjct: 214 SVNPIFFDFAMDLDT 228
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 148 VAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DT 206
VAA++ D+V R + P+S+A R RR +ISERIR LQ LVP K +T
Sbjct: 280 VAAIEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNT 339
Query: 207 ASMLDEAIHYVKFLKTQVQSL--ERAAANRPA 236
+ MLD A+ Y+K L+ QV++L RA+ PA
Sbjct: 340 SDMLDLAVDYIKDLQKQVKALNESRASCTCPA 371
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASM-LDEAIHYVKFLKTQVQSL-ERAA 231
D S+A R RRE+ISER++ LQ LVPG K+ ++ LDE I+YVK L+ QV+ L + A
Sbjct: 51 DSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFLVGKLA 110
Query: 232 ANRPAGIGFPATLTT 246
+ P IG A L +
Sbjct: 111 SISPMLIGHEANLDS 125
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+Y
Sbjct: 232 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 289
Query: 217 VKFLKTQVQ--SLERAAAN 233
V+ L+ QV+ S++ AA N
Sbjct: 290 VQSLQRQVEFLSMKLAAVN 308
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ +
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 326
Query: 231 AANRPAGIGFPATLTTGNYP 250
+ N A L+ +P
Sbjct: 327 SVNTRLDFNMDALLSKDIFP 346
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 7/71 (9%)
Query: 162 KPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
+PPK+ + + + D S+A R RRE+ISER++ILQ LVPG K + AS+LDE I
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 215 HYVKFLKTQVQ 225
+Y++ L+ QV+
Sbjct: 179 NYIQSLQHQVE 189
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ +
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 326
Query: 231 AANRPAGIGFPATLTTGNYP 250
+ N A L+ +P
Sbjct: 327 SVNTRLDFNMDALLSKDIFP 346
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
R RR+RI+E++R LQ L+P K+D ASML+EAI Y+K L+ QVQ +
Sbjct: 334 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 380
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
S + S++ + RR+RI++++R LQ L+P K+D S+LDEAI Y+K L+ QVQ + A
Sbjct: 15 SAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVMSMGA 74
Query: 232 ANRPAGIGFPATL 244
A + PA L
Sbjct: 75 GMCMAPVMIPAVL 87
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 17/88 (19%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA-------- 232
+ RR +I+ER++ LQ+LVPG +K + AS LD+ IHY+K L+ QVQ++ A
Sbjct: 180 KRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQQQVQAMSVGLAAPAVYPIV 239
Query: 233 -------NRPAGIGFPAT--LTTGNYPP 251
P + FPA + G +PP
Sbjct: 240 QPQCMPPGMPVAMPFPAAHPMVLGGHPP 267
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ +
Sbjct: 261 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 320
Query: 231 AANRPAGIGFPATLTTGNYP 250
+ N A L+ +P
Sbjct: 321 SVNTRLDFNMDALLSKDIFP 340
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 244 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 300
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPA 236
+++ + RR +I+E+++ LQ+L+P K D ASMLDEAI Y+K L+ QVQ+L A N
Sbjct: 110 NLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQAL--AVMN--- 164
Query: 237 GIGFPATLTTGNYPPII 253
G+G L PP++
Sbjct: 165 GLG----LNPMRLPPVM 177
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 135 QNSMA---AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERI 191
QN +A ++ +T +AA++ D+V R + P+S+A R RR RISERI
Sbjct: 274 QNGLAHQFSLPKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERI 333
Query: 192 RILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
R LQ LVP K +TA MLD A+ Y+K L+ QV+ + + A+
Sbjct: 334 RKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESRAS 376
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+Y
Sbjct: 138 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINY 195
Query: 217 VKFLKTQVQ--SLERAAAN 233
V+ L+ QV+ S++ AA N
Sbjct: 196 VQSLQRQVEFLSMKLAAVN 214
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPA 236
+++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ + P
Sbjct: 322 NLSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMMSMGCGMMP- 380
Query: 237 GIGFPA 242
+ FP
Sbjct: 381 -MMFPG 385
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 220 DSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLA 279
Query: 231 AAN 233
A N
Sbjct: 280 AVN 282
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 109 YSPNERYWRGGAGDSNSSTGVPLSQ-------KQNSMAAMRETIFRVAAMQPIHIDPDSV 161
+ PN+ S +S+ +P Q +QN+ A +R A + H S
Sbjct: 177 FDPNKNAEEMHKDPSGNSSDIPKEQDEKKSRTEQNTAANLRGKQAAKQAKENSH----SG 232
Query: 162 KPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAI 214
+ PK + + + + S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I
Sbjct: 233 EAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 292
Query: 215 HYVKFLKTQVQSL 227
+YV+ L+ QV+ L
Sbjct: 293 NYVQSLQQQVEFL 305
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 237
++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ + P
Sbjct: 312 LSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMGCGMVP-- 369
Query: 238 IGFPA 242
+ FP
Sbjct: 370 MMFPG 374
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
R RR+RI+E++R LQ L+P K+D ASML+EAI Y+K L+ QVQ +
Sbjct: 334 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 380
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ +
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 326
Query: 231 AANRPAGIGFPATLTTGNYP 250
+ N A L+ +P
Sbjct: 327 SVNTRLDFNMDALLSKDIFP 346
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 315 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 364
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 40 NLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 90
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRERISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 120 DSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLA 179
Query: 233 NRPAGIGF 240
+ F
Sbjct: 180 TMNPQLDF 187
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 237
++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ + P
Sbjct: 308 LSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMGCGMVP-- 365
Query: 238 IGFPA 242
+ FP
Sbjct: 366 MMFPG 370
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RIS+RIR LQ LVP K +TA ML+EA+ YV
Sbjct: 78 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYV 137
Query: 218 KFLKTQVQSL 227
K L+ Q++ L
Sbjct: 138 KGLQKQIEEL 147
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
R RR+RI+E++R LQ L+P K+D ASML+EAI Y+K L+ QVQ +
Sbjct: 338 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 384
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ R RR+RI+ER++ LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 299 NLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQVM 349
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 280 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 332
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 179 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
+ R RR+RI+E++R LQ+L+P K D ASML+EAI Y+K L+ Q+Q + + P +
Sbjct: 368 SERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVMWMGSGMTP--V 425
Query: 239 GFPA 242
FP
Sbjct: 426 MFPG 429
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRERISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 90 DSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLA 149
Query: 233 NRPAGIGF 240
+ F
Sbjct: 150 TMNPQLDF 157
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 162 KPPKRRNVKISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
KP R + K S+ + +++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K
Sbjct: 163 KPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQ 222
Query: 220 LKTQVQSL 227
L+ QVQ L
Sbjct: 223 LQLQVQML 230
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 7/78 (8%)
Query: 157 DPDSVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASM 209
+P +PPK+ + + + D S+A R RRE+ISER+++LQ LVPG K + AS+
Sbjct: 98 NPTPPEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASV 157
Query: 210 LDEAIHYVKFLKTQVQSL 227
LDE I+Y++ L+ QV+ L
Sbjct: 158 LDEIINYIQALQRQVEFL 175
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+Y
Sbjct: 180 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINY 237
Query: 217 VKFLKTQVQ--SLERAAAN 233
V+ L+ QV+ S++ AA N
Sbjct: 238 VQSLQRQVEFLSMKLAAVN 256
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Query: 162 KPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
+PPK+ + + + D S+A R RRERISER++ILQ LVPG K + A +LDE I
Sbjct: 84 EPPKQDYIHVRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEII 143
Query: 215 HYVKFLKTQVQSL 227
+Y++ L+ QV+ L
Sbjct: 144 NYIQSLQQQVEFL 156
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 143 ETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGT 202
+T + AM+ DSV R + P+S+A R RR RISER+R LQ LVP
Sbjct: 249 KTAMEMVAMEKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMD 308
Query: 203 KM-DTASMLDEAIHYVKFLKTQVQSLERAAAN 233
K +TA MLD A+ Y+K L+ Q ++L AN
Sbjct: 309 KQTNTADMLDLAVVYIKDLQKQYKTLSDNRAN 340
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+ER++ LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+ER++ LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 269
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 274 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 326
>gi|47232560|dbj|BAD18983.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
gi|47232562|dbj|BAD18984.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
Length = 670
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ +VQ LE A N
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRVQELEAARGN 530
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L + A
Sbjct: 130 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIA 189
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 190 SLSPVLYGF 198
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+ER++ LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 269
>gi|356503537|ref|XP_003520564.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 577
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 116 WRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDP 175
W GA D V ++ S ++ +F V + + P + +V
Sbjct: 367 WNSGADDYQHHFHVSVASV-TSQWLLKYILFSVPYLHTNWLKGKGTSPYETSHV------ 419
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A RHRRE+++ER IL+ +VP T+MD AS+L + I Y+K L+ +++SLE
Sbjct: 420 --MAERHRREKLNERFLILRSMVPSVTRMDKASILGDTIEYIKQLRDKIESLE 470
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 277 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 326
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Query: 157 DPDSVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASM 209
+P S + PK + + + + S+A R RRE+ISER+R+LQ LVPG K+ A M
Sbjct: 226 NPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVM 285
Query: 210 LDEAIHYVKFLKTQVQSL 227
LDE I+YV+ L+ QV+ L
Sbjct: 286 LDEIINYVQSLQQQVEFL 303
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + AS+LDE I+Y++ L+ QV+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 199
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + AS+LDE I+Y++ L+ QV+ L
Sbjct: 143 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 197
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+ER++ LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + AS+LDE I+Y++ L+ QV+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 199
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 179 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
+ R RR++I++R++ LQ+LVP +K D ASMLDE I Y+K L+ Q+Q + R
Sbjct: 278 SERKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQLQMINR 328
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 325 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 374
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRERISER+R+LQ LVPG K+ A +LDE I+YV+ L+ QV+ L + A
Sbjct: 120 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIA 179
Query: 232 ANRPAGIGF 240
+ P GF
Sbjct: 180 SLSPVLYGF 188
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR+RI+++++ LQ+LVP +K D ASMLDE I Y+K L+ QVQ
Sbjct: 195 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 239
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 161 VKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
V+PP+ R + D S+A R RRERIS+R+++LQ LVPG K + A MLDE I
Sbjct: 185 VEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 244
Query: 215 HYVKFLKTQVQSL 227
+YV+ L+ QV+ L
Sbjct: 245 NYVQSLQRQVEFL 257
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+++ R RR+RI+E++R LQ L+P K+D ASML+EAI Y+K L+ QVQ
Sbjct: 219 HNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQ 268
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RISER+R LQ LVP K +T+ MLDEA+ Y+
Sbjct: 19 DSVPCRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYM 78
Query: 218 KFLKTQV 224
KFL+ QV
Sbjct: 79 KFLQKQV 85
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR+RI+++++ LQ+LVP +K D ASMLDE I Y+K L+ QVQ
Sbjct: 233 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 277
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRE+I++R+++LQ LVPG K+ TA +LDE I++V+FL+ QV+ L R A
Sbjct: 191 DSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQVEILSMRLA 250
Query: 232 ANRP 235
A P
Sbjct: 251 AVNP 254
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 64/125 (51%), Gaps = 21/125 (16%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+Y
Sbjct: 140 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 197
Query: 217 VKFLKTQVQSLE-RAAANRP----------AGIGFPATLTTGNYPPI-IGKEYQQPAVRN 264
V+ L+ QV+ L + AA P A FPA N+P I + E P+
Sbjct: 198 VQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPA--CAANFPTIGMSSEMTNPSY-- 253
Query: 265 GALHY 269
LHY
Sbjct: 254 --LHY 256
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ
Sbjct: 9 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQ 58
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
+++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ + P
Sbjct: 313 HNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMMSMGCGMVP 372
Query: 236 AGIGFPA 242
+ FP
Sbjct: 373 --VMFPG 377
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 325 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 374
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L + A
Sbjct: 42 DSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQVEFLSMKLA 101
Query: 232 ANRPA 236
A +PA
Sbjct: 102 AVKPA 106
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 179 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
+ R RR+RI+E++R LQ+L+P K D ASML+EAI Y+K L+ Q+Q + P +
Sbjct: 368 SERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVMWMGGGMTP--V 425
Query: 239 GFPA 242
FP
Sbjct: 426 MFPG 429
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 156 IDPDSVKPPKRRNVKISK----DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASML 210
++ D +P +V+ + D S+A R RRERISER+R+LQ LVPG K+ A +L
Sbjct: 107 VEDDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVL 166
Query: 211 DEAIHYVKFLKTQVQSLE-RAAANRPAGIGF 240
DE I+YV+ L+ QV+ L + A+ P GF
Sbjct: 167 DEIINYVQSLQNQVEFLSMKIASLSPVLYGF 197
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPA 236
+++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ + P
Sbjct: 264 NLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQMMSMGCGMVP- 322
Query: 237 GIGFPA 242
+ FP
Sbjct: 323 -MMFPG 327
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
S + +++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 197 SAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 252
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 300 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 354
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQV 224
R N + P+S+A R RR +ISER++ LQ LVP + +TA MLD+A+ YVK L+ QV
Sbjct: 380 RANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQV 439
Query: 225 QSLERAAA 232
Q L A
Sbjct: 440 QELTNTVA 447
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
++ R RR+RI+E++R LQ L+P K D AS+LDEAI Y+K L+ QVQ
Sbjct: 227 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQ 274
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
++ R RR+RI+E++R LQ L+P K D AS+LDEAI Y+K L+ QVQ
Sbjct: 238 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQ 285
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 353 SLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 404
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 353 SLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 404
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + AS+LDE I+Y++ L+ QV+ L
Sbjct: 104 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 158
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
R RR++I++R++ LQ+LVP +K D ASMLDE I Y+K L+ QV + R
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSR 271
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
D+V R + P+S+A R RR +ISERIR LQ LVP K +T+ MLD A+ Y+
Sbjct: 279 DAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYI 338
Query: 218 KFLKTQVQSLERAAAN 233
K L+ QV+ L+ AN
Sbjct: 339 KELQKQVKVLKETQAN 354
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 192 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 243
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
S D + + R RR+RI+E+++ LQ L+P TK D SMLDEAI Y+K L+ Q+Q L
Sbjct: 21 SADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 179
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+YV+ L+ QV++L
Sbjct: 450 DSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENL 504
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+SL
Sbjct: 63 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVESL 117
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 150 AMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTAS 208
A++ I DSV R + P+S+A R RR +ISER+R LQ LVP K +T+
Sbjct: 344 AIEKILQFSDSVPCKLRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSD 403
Query: 209 MLDEAIHYVKFLKTQVQSL 227
MLD A+ Y+K L+ QVQ+L
Sbjct: 404 MLDLAVEYIKGLQKQVQTL 422
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ--SLERAAANRP 235
++ R RR+RI+E++R LQ L+P K+D +SML+EAI Y+K L+ QVQ S+ P
Sbjct: 329 LSERRRRDRINEKMRALQELIPNCNKVDKSSMLEEAIEYLKTLQLQVQMMSMGTGLCMPP 388
Query: 236 AGIGFPA 242
A + PA
Sbjct: 389 AAMLLPA 395
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+YV+ L+ Q++ S++ A
Sbjct: 82 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLA 141
Query: 231 AANRPAGIGF 240
A N GF
Sbjct: 142 AVNPRLDYGF 151
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 119 GAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDP-DSVKPPKRRNVKISKDPQS 177
GA D+N +T +Q + R+ + +A +P P D + RR + D S
Sbjct: 235 GAEDNNPTTKGKAAQSSSENGGGRKQQGKESATKPPAEAPKDYIHVRARRGE--ATDSHS 292
Query: 178 VAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
+A R RRE+IS+R+++LQ LVPG K + A MLDE I+YV+ L+ QV+ L
Sbjct: 293 LAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 343
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 161 VKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
V+PP+ R + D S+A R RRERIS+R+++LQ LVPG K + A MLDE I
Sbjct: 185 VEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 244
Query: 215 HYVKFLKTQVQSL 227
+YV+ L+ QV+ L
Sbjct: 245 NYVQSLQRQVEFL 257
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 150 AMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTAS 208
A++ I DSV R + P+S+A R RR +ISER+R LQ LVP K +T+
Sbjct: 344 AIEKILQFSDSVPCKLRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSD 403
Query: 209 MLDEAIHYVKFLKTQVQSL 227
MLD A+ Y+K L+ QVQ+L
Sbjct: 404 MLDLAVEYIKGLQKQVQTL 422
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 281 HNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 332
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 161 VKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
V+PPK R + D S+A R RRERIS+R++ LQ LVPG K + A MLDE I
Sbjct: 176 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEII 235
Query: 215 HYVKFLKTQVQSL 227
+YV+ L+ QV+ L
Sbjct: 236 NYVQSLQRQVEFL 248
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
R RR++I++R++ LQ+LVP +K D ASMLDE I Y+K L+ QV + R
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSR 271
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 161 VKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
V+PP+ R + D S+A R RRERIS+R+++LQ LVPG K + A MLDE I
Sbjct: 185 VEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 244
Query: 215 HYVKFLKTQVQSL 227
+YV+ L+ QV+ L
Sbjct: 245 NYVQSLQRQVEFL 257
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+++ R RR+RI+E++R LQ L+P K D AS+LDEAI Y+K L+ QVQ
Sbjct: 341 HNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQ 390
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 118 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 167
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 193 LSERRRRDRINEKMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVM 242
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 16/87 (18%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN------- 233
+ RR +I+ER++ LQ+LVPG +K + AS LD+ IHY+K L+ QVQ++ A+
Sbjct: 174 KRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMSVGLASPAVYPVV 233
Query: 234 --------RPAGIGFPAT-LTTGNYPP 251
P + FPA + G +PP
Sbjct: 234 QPQCVPPATPVAMPFPAAPMFLGGHPP 260
>gi|255576033|ref|XP_002528912.1| DNA binding protein, putative [Ricinus communis]
gi|223531666|gb|EEF33492.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR 234
+A R RRE++S+R L +VPG KMD AS+L +AI Y+K L+ +V++LE AA +
Sbjct: 181 IAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKHLQERVKTLEEQAAKK 237
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
++ R RR+RI+E++R LQ L+P K D AS+LDEAI Y+K L+ QVQ
Sbjct: 327 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQ 374
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 151 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 200
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 395 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 449
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 268 HNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 319
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 22/120 (18%)
Query: 162 KPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
+PPK+ + + + D S+A R RRE+ISER++ILQ LVPG K + A +LDE I
Sbjct: 137 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 196
Query: 215 HYVKFLKTQVQ--SLERAAANRPAGI-----GF--------PATLTTGNYPPIIGKEYQQ 259
+Y++ L+ QV+ S++ A N G+ GF P T + P + ++Y Q
Sbjct: 197 NYIQSLQRQVEFLSMKLEAVNSRMGMNPTVEGFHPKDADAQPFDATGMIFGPQVARDYAQ 256
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 15 DSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEFLSMKVA 74
Query: 231 AAN-RPAGIGFPATLTTGNYPPI 252
A N R I L +P I
Sbjct: 75 ALNHRVDFINVDDLLAKQMFPTI 97
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 150 NLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 200
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 304 HNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 355
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 299 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEFL 353
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 348 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 402
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 148 VAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DT 206
+AA++ DSV R + P+S+A R RR +ISER+R LQ LVP K +T
Sbjct: 320 MAAIEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNT 379
Query: 207 ASMLDEAIHYVKFLKTQVQSL 227
A MLD A+ Y+K L+ QV++L
Sbjct: 380 ADMLDLAVEYIKDLQNQVEAL 400
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 143 ETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGT 202
+T +AA++ D+V R + P+S+A R RR +ISERIR LQ LVP
Sbjct: 295 KTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMD 354
Query: 203 KM-DTASMLDEAIHYVKFLKTQVQSL--ERAAANRPA 236
K +T+ MLD A+ Y+K L+ QV++L RA+ PA
Sbjct: 355 KQTNTSDMLDLAVDYIKDLQKQVKALNESRASCTCPA 391
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 137 SMAAMRETIFRVAAMQPI-HIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 195
S ++ +T +AA++ + I DSV R + P+S+A R RR RIS +++ LQ
Sbjct: 263 SQFSLPQTTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQ 322
Query: 196 RLVPGGTKMDTAS-MLDEAIHYVKFLKTQVQSLERAAANRPAG 237
LVP K + S MLD A+ ++K L+ Q+Q L + N G
Sbjct: 323 ELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTCG 365
>gi|163311848|gb|ABY26937.1| putative anthocyanin transcriptional regulator [Ipomoea
hochstetteri]
Length = 683
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE A N
Sbjct: 488 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGN 543
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 140 AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 199
++ +T +AAM+ DSV R + P+S+A R RR RISER+R LQ LVP
Sbjct: 171 SLPKTSAEMAAMEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 230
Query: 200 GGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
K +TA MLD A+ Y+K L+ Q +L
Sbjct: 231 NMDKQTNTADMLDLAVEYIKDLQKQYNTL 259
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 18/90 (20%)
Query: 180 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN------ 233
A+ RR +I+ER++ LQ+LVPG +K + AS LD+ IHY+K L+ QVQ++ A+
Sbjct: 222 AQRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMSVGLASPAVYPV 281
Query: 234 ---------RPAGIGFPAT---LTTGNYPP 251
P + FPA + G +PP
Sbjct: 282 VQPQGMPLGTPVAMPFPAAHPPVVLGGHPP 311
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+++ R RR+RI+E++R LQ LVP K D AS+LDEAI Y+K L+ QVQ
Sbjct: 253 HNMSERRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 302
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 367 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 421
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ Q++ L A
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLA 240
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR++I++R++ LQ+LVP +K D ASMLDE I Y+K L+ QVQ
Sbjct: 292 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 336
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ Q++ L A
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLA 240
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P PP R + S + + + R RR+RI+E+++ LQ L+P TK D SMLDEAI Y+
Sbjct: 7 PRRSTPPTTRRSR-SAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYL 65
Query: 218 KFLKTQVQSL 227
K L+ Q+Q L
Sbjct: 66 KSLQLQLQML 75
>gi|224081405|ref|XP_002306398.1| predicted protein [Populus trichocarpa]
gi|222855847|gb|EEE93394.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 172 SKDP-QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
SK P ++ R+RRE++S+R L +VPG KMD AS+L +AI Y+K+L+ +V++LE
Sbjct: 1 SKSPSHAIEERNRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKYLQERVKTLEEQ 60
Query: 231 AANR 234
AA +
Sbjct: 61 AAKK 64
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ Q++ L A
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLA 240
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ LQ L+PG K+ A MLDE I+Y
Sbjct: 187 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINY 244
Query: 217 VKFLKTQVQ--SLERAAAN 233
V+ L+ QV+ S++ AA N
Sbjct: 245 VQSLQRQVEFLSMKLAAVN 263
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 15/91 (16%)
Query: 158 PDSVK-------PPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM- 204
P SVK PPK R + D S+A R RRE+ISER++ LQ LVPG K+
Sbjct: 354 PKSVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 413
Query: 205 DTASMLDEAIHYVKFLKTQVQ--SLERAAAN 233
A MLDE I+YV+ L+ QV+ S++ AA N
Sbjct: 414 GKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 444
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
PKRR + + +++ R RR+RI+E++R LQ L+P K D AS+LDE I Y+K L+ Q
Sbjct: 225 PKRRTR--AAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQ 282
Query: 224 VQ 225
VQ
Sbjct: 283 VQ 284
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+SL A
Sbjct: 397 DSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQVESLSMKVA 456
Query: 233 N 233
+
Sbjct: 457 S 457
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ Q++ L A
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLA 240
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ Q++ L A
Sbjct: 178 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLA 237
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 287 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFL 341
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+R LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 146 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFL 200
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 359 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 413
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+I+ R+++LQ LVPG K+ TA +LDE I++V+ L+ QV+ S+ A
Sbjct: 210 DSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLA 269
Query: 231 AANRPAGIGFPATLTTGNYP 250
A N + L T N P
Sbjct: 270 AVNPRVDFNIESILATENEP 289
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 165 KRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+RR ++ +++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ Q+
Sbjct: 249 RRRAAQV----HNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQLQL 304
Query: 225 QSLERAAANRPAGIGFPATLTTGNYPPII 253
Q + AG+ + PP +
Sbjct: 305 QVVWMGGGIAAAGVHQRTMVAAPGRPPHV 333
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 218 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 269
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 381 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 435
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 91 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 142
>gi|242037067|ref|XP_002465928.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
gi|241919782|gb|EER92926.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
Length = 287
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ--SLERAAAN 233
Q AAR RR+RISE+ L RL+PG K++TA ML+EA +VK L+ QV +L RAA +
Sbjct: 155 QKSAARQRRKRISEKTAELARLIPGAHKLNTAEMLEEAARHVKLLQAQVGVLALMRAAGS 214
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+YV+ L+ Q++ S++ A
Sbjct: 85 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLA 144
Query: 231 AANRP 235
A N P
Sbjct: 145 AVNPP 149
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
Query: 160 SVKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEA 213
+V+PPK R + D S+A R RRE+IS+R++ LQ LVPG K + A MLDE
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 214 IHYVKFLKTQVQSLERAAANRPAGIGFPATLTTGNYPPIIGKE-YQQPA 261
I+YV+ L+ QV+ L A + F N ++ K+ YQQP
Sbjct: 206 INYVQSLQQQVEFLSMKLATVNPELDF------SNLSTLLHKDMYQQPC 248
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 216 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 267
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFL 321
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 163 LSEKRRRNRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKKLQLQVQML 212
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR++I++R++ LQ+LVP K D ASMLDE I Y+K L+ QVQ
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR++I++R++ LQ+LVP K D ASMLDE I Y+K L+ QVQ
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|356574313|ref|XP_003555293.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 353
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQSV AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 270 DPQSVYARRRRERINERLRILQHLVPNGTKVDISTMLEEAVKYVKFLQLQIKLL 323
>gi|329750801|gb|AEC03343.1| bHLH transcription factor MYC1 [Diospyros kaki]
Length = 719
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L++++Q LE +A
Sbjct: 502 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRSKIQDLEASA 555
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 200 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLA 259
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query: 165 KRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+RR ++ +++ R RR+RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ Q+
Sbjct: 312 RRRAAEV----HNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQL 367
Query: 225 Q 225
Q
Sbjct: 368 Q 368
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 164 PKRRNVKISK--DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
P R + K S+ + +++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+
Sbjct: 152 PPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 211
Query: 222 TQVQSL 227
QVQ L
Sbjct: 212 LQVQML 217
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 166 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 217
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 200 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLA 259
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 154 IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDE 212
+ + DSV R + P+S+A R RR RIS+R++ LQ LVP K +T+ MLD
Sbjct: 270 LQMQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDL 329
Query: 213 AIHYVKFLKTQVQSLERAAAN 233
A+ Y+K LK +V+ L+ AN
Sbjct: 330 AVDYIKELKDRVEKLKHDQAN 350
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPG-GTKMDTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG K A MLDE I+YV+ L+ QV+ L
Sbjct: 243 SLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFL 294
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
Query: 160 SVKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEA 213
+V+PPK R + D S+A R RRE+IS+R++ LQ LVPG K + A MLDE
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 214 IHYVKFLKTQVQSLERAAANRPAGIGFPATLTTGNYPPIIGKE-YQQPA 261
I+YV+ L+ QV+ L A + F N ++ K+ YQQP
Sbjct: 206 INYVQSLQQQVEFLSMKLATVNPELDF------SNLSTLLHKDMYQQPC 248
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RISER+R LQ L P K +TA MLD A+ Y+
Sbjct: 327 DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYI 386
Query: 218 KFLKTQVQSL 227
K L+ QV++L
Sbjct: 387 KDLQKQVKTL 396
>gi|297834858|ref|XP_002885311.1| hypothetical protein ARALYDRAFT_342085 [Arabidopsis lyrata subsp.
lyrata]
gi|297331151|gb|EFH61570.1| hypothetical protein ARALYDRAFT_342085 [Arabidopsis lyrata subsp.
lyrata]
Length = 270
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 157 DPDSVKPPKRRNVKISKDPQSVA-ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
+PD + P ++ K ++D SV A+ R+ER+ ERI LQ+LV K D AS+L EA+
Sbjct: 130 EPDQNRKPDKK-CKRNQDKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMG 188
Query: 216 YVKFLKTQVQSL 227
Y+KFL+ Q+Q L
Sbjct: 189 YIKFLQDQIQVL 200
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 165 MSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 214
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 151 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 202
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RISER+R LQ LVP K +T+ MLD A+ Y+
Sbjct: 213 DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYI 272
Query: 218 KFLKTQVQSL 227
K L+ QV++L
Sbjct: 273 KDLQKQVKTL 282
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 179 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+ R RR++I++R++ LQ+LVP +K D ASMLDE I Y+K L+ QVQ +
Sbjct: 242 SERRRRDKINQRMKELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMM 290
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 12/89 (13%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ S++
Sbjct: 160 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 219
Query: 231 AANRPAGIGFPATLTTGNYPPIIGKEYQQ 259
A N G A +PP K+Y Q
Sbjct: 220 AVNSRLNTGIEA------FPP---KDYGQ 239
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 175 SLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 226
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+ R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ + R AA
Sbjct: 141 DSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYVQSLQRQVE-VARKAA 199
Query: 233 NRPAGIGFPATLTTGNYPPIIGKEYQQ 259
G+ P Y P I K YQ+
Sbjct: 200 KTTGGVKKP-----NGYRPRIHK-YQK 220
>gi|125544694|gb|EAY90833.1| hypothetical protein OsI_12438 [Oryza sativa Indica Group]
Length = 263
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R + + P++ ++ER+ + +R L+ ++PGG +MDT ++LDEA+ Y+K LK +V+
Sbjct: 195 RSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVK 254
Query: 226 SL 227
L
Sbjct: 255 KL 256
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 148 VAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DT 206
VA+++ + D+V R + P+S+A R RR RISER+R LQ LVP K +T
Sbjct: 265 VASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNT 324
Query: 207 ASMLDEAIHYVKFLKTQVQSLERAAAN 233
A MLD A+ Y+K L+ Q ++L AN
Sbjct: 325 ADMLDLAVDYIKELQKQFKTLSDNRAN 351
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 196
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 18/118 (15%)
Query: 162 KPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
+PPK+ + + + D S+A R RRE+ISER++ILQ LVPG K + A +LDE I
Sbjct: 137 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 196
Query: 215 HYVKFLKTQVQ--SLERAAANRPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGALHYG 270
+Y++ L+ QV+ S++ A N G A +PP K++ Q A + +G
Sbjct: 197 NYIQSLQRQVEFLSMKLEAVNSRLNSGIEA------FPP---KDFGQQAFDPAGIPFG 245
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE-RAAANR 234
+++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L R N
Sbjct: 181 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINL 240
Query: 235 PAGIGFPAT 243
+ P T
Sbjct: 241 HHPLCLPGT 249
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 107 FSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKR 166
FS +PN+R A + N LS + + + ++ A + + + DSV R
Sbjct: 279 FSTTPNKR-----AKNINGDILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVR 333
Query: 167 RNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDT-ASMLDEAIHYVKFLKTQVQ 225
+ P+S+A R RR RIS +++ LQ LVP K + A MLD A+ ++K L+ +VQ
Sbjct: 334 AKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQ 393
Query: 226 SLERAAANRPAGI 238
L + N G
Sbjct: 394 KLNKELENCTCGC 406
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIH 215
PPK + + + + S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+
Sbjct: 361 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIIN 420
Query: 216 YVKFLKTQVQSL 227
YV+ L+ QV+ L
Sbjct: 421 YVQSLQRQVEFL 432
>gi|414864593|tpg|DAA43150.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 290
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ--SLERAAAN 233
Q+ AAR RR+RISE+ L RL+PG K++TA ML+EA +VK L+ QV +L RAA +
Sbjct: 159 QNSAARQRRKRISEKTAELARLIPGANKLNTAEMLEEASRHVKLLQAQVGMLALMRAAGS 218
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 160 SVKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEA 213
+ +PPK R + D S+A R RRE+IS+R+++LQ LVPG K + A MLDE
Sbjct: 164 AAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEI 223
Query: 214 IHYVKFLKTQVQSL 227
I+YV+ L+ QV+ L
Sbjct: 224 INYVQSLQQQVEFL 237
>gi|108709600|gb|ABF97395.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125544695|gb|EAY90834.1| hypothetical protein OsI_12439 [Oryza sativa Indica Group]
gi|125586994|gb|EAZ27658.1| hypothetical protein OsJ_11606 [Oryza sativa Japonica Group]
gi|215678773|dbj|BAG95210.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 263
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R + + P++ ++ER+ + +R L+ ++PGG +MDT ++LDEA+ Y+K LK +V+
Sbjct: 195 RSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVK 254
Query: 226 SL 227
L
Sbjct: 255 KL 256
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
S+A R RR++ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 152 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 211
Query: 236 AGIGF 240
+GF
Sbjct: 212 PELGF 216
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 160 SVKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEA 213
+ +PPK R + D S+A R RRE+IS+R+++LQ LVPG K + A MLDE
Sbjct: 164 AAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEI 223
Query: 214 IHYVKFLKTQVQSL 227
I+YV+ L+ QV+ L
Sbjct: 224 INYVQSLQQQVEFL 237
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
R RR+RI+E++R LQ L+P K D AS+LDEAI Y+K L+ QVQ +
Sbjct: 216 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 262
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
D+V R + P+S+A R RR +ISERIR LQ LVP K +TA MLD A+ Y+
Sbjct: 154 DAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYI 213
Query: 218 KFLKTQVQSLERAAAN 233
K L+ QV+ L AN
Sbjct: 214 KDLQKQVKVLNDGRAN 229
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
S+A R RR++ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 158 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 217
Query: 236 AGIGF 240
+GF
Sbjct: 218 PELGF 222
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIH 215
PPK + + + + S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+
Sbjct: 317 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIIN 376
Query: 216 YVKFLKTQVQSLERAAA 232
YV+ L+ QV+ L A
Sbjct: 377 YVQSLQRQVEFLSMKLA 393
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 355 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 409
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RR+RISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 256 DSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 310
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIH 215
PPK + + + + S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+
Sbjct: 363 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 422
Query: 216 YVKFLKTQVQSL 227
YV+ L+ QV+ L
Sbjct: 423 YVQSLQRQVEFL 434
>gi|163311834|gb|ABY26930.1| putative anthocyanin transcriptional regulator [Ipomoea alba]
Length = 671
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE A A+
Sbjct: 476 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARAS 531
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR+RI+++++ LQ+LVP +K D ASMLDE I Y+K L+ QVQ
Sbjct: 285 RKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQ 329
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 162 KPPKRRNVKISKDPQSVAA------RHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
+PP R IS AA R RR+RI+++++ LQ+LVP +K D ASMLDE I
Sbjct: 245 EPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIE 304
Query: 216 YVKFLKTQVQ 225
++K L+ QVQ
Sbjct: 305 HLKQLQAQVQ 314
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQ 225
+ D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+FL+ QV+
Sbjct: 13 ATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQVE 67
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 8/77 (10%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ S++
Sbjct: 148 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 207
Query: 231 AAN-----RPAGIGFPA 242
A N P GFP+
Sbjct: 208 AVNSRMNMNPTIDGFPS 224
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 147 RVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-D 205
RVA M+ + SV R + P+S+A R RR RIS RI+ LQ L P K
Sbjct: 338 RVATMEKFYQIQGSVPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTS 397
Query: 206 TASMLDEAIHYVKFLKTQVQSL 227
TA MLD A+ Y+K L+ QV+ L
Sbjct: 398 TADMLDLAVEYIKDLQKQVKML 419
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
S + +++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 197 SAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 252
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 263 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFL 317
>gi|37991892|gb|AAR06338.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 166 RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R + + P++ ++ER+ + +R L+ ++PGG +MDT ++LDEA+ Y+K LK +V+
Sbjct: 195 RSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVK 254
Query: 226 SL 227
L
Sbjct: 255 KL 256
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+I+ER++ILQ LVPG K + AS+LDE I+YV+ L+ QV+ L
Sbjct: 123 DSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEFL 177
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 176 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 230
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
S + +++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 197 SAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 252
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ S++
Sbjct: 180 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 239
Query: 231 AANRPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGALHYG 270
A N G G +PP K+Y Q + +G
Sbjct: 240 AVNSRIGPGIEV------FPP---KDYGQQTFDTTGVAFG 270
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 162 KPPKRRNVKISKDPQSVAA------RHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
+PP R IS AA R RR+RI+++++ LQ+LVP +K D ASMLDE I
Sbjct: 245 EPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIE 304
Query: 216 YVKFLKTQVQ 225
++K L+ QVQ
Sbjct: 305 HLKQLQAQVQ 314
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 413 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 467
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 107 FSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKR 166
FS +PN+R A + N LS + + + ++ A + + + DSV R
Sbjct: 226 FSTTPNKR-----AKNINGDILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVR 280
Query: 167 RNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDT-ASMLDEAIHYVKFLKTQVQ 225
+ P+S+A R RR RIS +++ LQ LVP K + A MLD A+ ++K L+ +VQ
Sbjct: 281 AKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQ 340
Query: 226 SLERAAANRPAGI 238
L + N G
Sbjct: 341 KLNKELENCTCGC 353
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 381 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 435
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 140 AMRETIFRVAAMQPI-HIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLV 198
++ +T +A ++ + +I DSV R + P+S+A R RR RIS R++ LQ LV
Sbjct: 273 SLPQTSLEMATVEKLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGRLKKLQDLV 332
Query: 199 PGGTKMDT-ASMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
P K + A MLD A+ ++K L+ +VQ L + N G
Sbjct: 333 PNMDKQTSYADMLDLAVQHIKGLQGEVQKLHKELENCTCGC 373
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 381 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 435
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Query: 159 DSVKPPK--------RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASM 209
DS KPP+ R + D S+A R RRE+IS+R++ LQ LVPG K+ A M
Sbjct: 339 DSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVM 398
Query: 210 LDEAIHYVKFLKTQVQSL 227
LDE I+YV+ L+ QV+ L
Sbjct: 399 LDEIINYVQSLQRQVEFL 416
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER+ LQ LVPG K+ A MLDE I+Y
Sbjct: 189 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINY 246
Query: 217 VKFLKTQVQ--SLERAAAN 233
V+ L+ QV+ S++ AA N
Sbjct: 247 VQSLQRQVEFLSMKLAAVN 265
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
R RR+RI+E++R LQ L+P K D AS+LDEAI Y+K L+ QVQ +
Sbjct: 207 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 253
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 225 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFL 279
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Query: 160 SVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDE 212
S +PPK+ + + + D S+A R RRE+ISER++ILQ +VPG K + A +LDE
Sbjct: 89 SEQPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDE 148
Query: 213 AIHYVKFLKTQVQSL 227
I+Y++ L+ QV+ L
Sbjct: 149 IINYIQSLQHQVEFL 163
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 112 NLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 162
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+IS+R+++LQ LVPG K + A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 286 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLA 345
Query: 231 AANRPAGIGFPATLTTGNYPPIIGKEYQQ 259
N L N P ++ K+ Q
Sbjct: 346 TVN--------PQLDFNNLPNLLAKDMHQ 366
>gi|441433511|gb|AGC31677.1| basic helix loop helix [Solanum tuberosum]
Length = 689
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ +VQ LE
Sbjct: 497 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKVQDLE 547
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR++I++R++ LQ+LVP +K D ASMLDE I Y+K L+ QVQ
Sbjct: 38 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 82
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 378 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 73 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 132
Query: 231 AANRP 235
N P
Sbjct: 133 TVNVP 137
>gi|451953538|dbj|BAM84238.1| bHLH transcription factor [Dahlia pinnata]
Length = 652
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ +VQ LE
Sbjct: 483 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLE 533
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 179 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
+ R RR+RI+E++R LQ L+P K D ASML+EAI Y+K L+ Q+Q
Sbjct: 31 SERRRRDRINEKMRALQELIPNSNKTDKASMLEEAIEYLKMLQLQLQ 77
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 147 RVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-D 205
R+A M+ ++ SV R + P+S+A R RR RIS RI+ LQ L P K
Sbjct: 342 RMATMEKLYQIQGSVPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTS 401
Query: 206 TASMLDEAIHYVKFLKTQVQSL 227
TA MLD A+ Y+K L+ QV+ L
Sbjct: 402 TADMLDLAVEYIKDLQKQVKIL 423
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RISER+R LQ LVP K +T+ MLD A+ Y+
Sbjct: 356 DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYI 415
Query: 218 KFLKTQVQSLERAAA 232
K L+ QV+ + AA
Sbjct: 416 KDLQKQVKRNRKKAA 430
>gi|297742516|emb|CBI34665.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 25/180 (13%)
Query: 64 HFVDNNSPHIVSSPSFSNMLSNSNTSLNGTSITAAQGTSI---PTYFSYSPNERY--W-- 116
+F+D N V FSN + NS S + S T + P + + + + W
Sbjct: 228 NFLDTNLNPAVLEDEFSNCVHNSMNSSDCISQTIMNPEKLILGPCFRNSNKESSFVSWKK 287
Query: 117 RGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHI--------DPDSVKPPKRRN 168
RG G +TG QK +++ +F VA M + D D + P+
Sbjct: 288 RGLMGTQKLNTGT--QQK-----LLKKVLFEVAQMHGGCLMSSRDNNGDNDEIWRPEADE 340
Query: 169 VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+ ++ ++ R RRE+I+ER +L+ LVP +++ S+LD+ I Y+K LK +V+ LE
Sbjct: 341 ITLN---HVLSERKRREKINERFSVLRSLVPSINQVNKVSVLDDTIEYLKELKRRVEELE 397
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Query: 160 SVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDE 212
S +PPK+ + + + D S+A R RRE+ISER++ILQ +VPG K + A +LDE
Sbjct: 89 SEQPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDE 148
Query: 213 AIHYVKFLKTQVQSL 227
I+Y++ L+ QV+ L
Sbjct: 149 IINYIQSLQHQVEFL 163
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLER---- 229
P+S+A R RR RISE++R LQ LVP K TA MLD A+ +++ L+ ++Q+L++
Sbjct: 153 PRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNELQALKKDKEK 212
Query: 230 --AAANRPAG 237
NRPAG
Sbjct: 213 CSCRGNRPAG 222
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+ + R RR+RI+E+++ LQ L+P TK D SMLDEAI Y+K L+ Q+Q L
Sbjct: 19 NFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 69
>gi|356565449|ref|XP_003550952.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 324
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR 234
+A R RRE++S+R L +VPG KMD A++L++AI YVK L+ +V++LE A ++
Sbjct: 156 IAERKRREKLSQRFIALSAIVPGLKKMDKATVLEDAIKYVKQLQERVKTLEEQAVDK 212
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
V+ + RR+RI+E+++ LQ L+P TK D SMLDEAI Y+K L+ Q+Q L
Sbjct: 146 VSRKRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 195
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
S +P +R + + + + + R RR+RI+E+++ LQ LVP K D AS+LDEAI Y+K
Sbjct: 133 SRRPAGKRRAR-AAEVHNQSERRRRDRINEKMKALQELVPHCNKSDKASILDEAIEYLKS 191
Query: 220 LKTQVQ 225
L+ QVQ
Sbjct: 192 LQLQVQ 197
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ S++
Sbjct: 56 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 115
Query: 231 AANRPAGIGFPATLTTGNYPPIIGKEYQQPAVRNGALHYG 270
A N G G +PP K+Y Q + +G
Sbjct: 116 AVNSRIGPGIEV------FPP---KDYGQQTFDTTGVAFG 146
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 160 SVKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEA 213
+V+PPK R + D S+A R RRE+IS+R++ LQ LVPG K + A MLDE
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 214 IHYVKFLKTQVQSL 227
I+YV+ L+ QV+ L
Sbjct: 207 INYVQSLQQQVEFL 220
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIH 215
PPK + + + + S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+
Sbjct: 350 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 409
Query: 216 YVKFLKTQVQSL 227
YV+ L+ QV+ L
Sbjct: 410 YVQSLQRQVEFL 421
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 169 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 218
>gi|312222653|dbj|BAJ33515.1| bHLH transcriptional factor [Dahlia pinnata]
gi|312222663|dbj|BAJ33520.1| bHLH transcriptional factor [Dahlia pinnata]
Length = 649
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ +VQ LE
Sbjct: 480 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLE 530
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 160 SVKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEA 213
+V+PPK R + D S+A R RRE+IS+R++ LQ LVPG K + A MLDE
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 214 IHYVKFLKTQVQSLERAAANRPAGIGFPATLTTGNYPPIIGKEYQQPA 261
I+YV+ L+ QV+ L A + F N ++ K+ QP
Sbjct: 207 INYVQSLQQQVEFLSMKLATVNPQLDF------SNLSTLLHKDMHQPC 248
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIH 215
PPK + + + + S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+
Sbjct: 399 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 458
Query: 216 YVKFLKTQVQSL 227
YV+ L+ QV+ L
Sbjct: 459 YVQSLQRQVEFL 470
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 248 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 302
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RISER+R LQ L P K +TA MLD A+ Y+
Sbjct: 165 DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYI 224
Query: 218 KFLKTQVQSL 227
K L+ QV++L
Sbjct: 225 KDLQKQVKTL 234
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 160 SVKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEA 213
+V+PPK R + D S+A R RRE+IS+R++ LQ LVPG K + A MLDE
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 214 IHYVKFLKTQVQSL 227
I+YV+ L+ QV+ L
Sbjct: 207 INYVQSLQQQVEFL 220
>gi|451953542|dbj|BAM84240.1| bHLH transcription factor [Dahlia pinnata]
Length = 649
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ +VQ LE
Sbjct: 480 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLE 530
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+ + R RR+RI+E+++ LQ L+P TK D SMLDEAI Y+K L+ Q+Q L
Sbjct: 23 NFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQML 73
>gi|451953544|dbj|BAM84241.1| bHLH transcription factor [Dahlia pinnata]
Length = 658
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ +VQ LE
Sbjct: 489 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLE 539
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+IS+R+++LQ LVPG K + A MLDE I+YV+ L+ QV+ L A
Sbjct: 83 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLA 142
Query: 233 NRPAGIGFPATLTTGNYPPIIGKEYQQ 259
+ F N P ++ K+ Q
Sbjct: 143 TVNPQLDF------NNLPNLLAKDMHQ 163
>gi|451953540|dbj|BAM84239.1| bHLH transcription factor [Dahlia pinnata]
Length = 651
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ +VQ LE
Sbjct: 482 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLE 532
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+YV+ L+ Q++ S++ A
Sbjct: 78 DSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFLSMKLA 137
Query: 231 AAN 233
A N
Sbjct: 138 AVN 140
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 160 SVKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEA 213
+V+PPK R + D S+A R RRE+IS+R++ LQ LVPG K + A MLDE
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 214 IHYVKFLKTQVQSL 227
I+YV+ L+ QV+ L
Sbjct: 207 INYVQSLQQQVEFL 220
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 144 DSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFL 198
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
D+V R + P+S+A R RR RISERIR LQ LVP K +TA MLD A+ Y+
Sbjct: 313 DAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYI 372
Query: 218 KFLKTQVQSL 227
K L+ QV+ L
Sbjct: 373 KELQKQVKVL 382
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 159 DSVKPPKRRNVKI---SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
+ KP +R K + + +++ R RR+RI+E++R LQ L+P K D AS+LDE I
Sbjct: 309 EETKPSRRYGTKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIE 368
Query: 216 YVKFLKTQVQ 225
Y+K L+ QVQ
Sbjct: 369 YLKSLQMQVQ 378
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
S+A R RR++ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 118 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 177
Query: 236 AGIGF 240
+GF
Sbjct: 178 PELGF 182
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>gi|332801235|gb|AEE99259.1| anthocyanin 1-like protein [Nicotiana sylvestris]
Length = 671
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ +VQ LE A
Sbjct: 478 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKVQDLEARA 531
>gi|332801231|gb|AEE99257.1| anthocyanin 1a [Nicotiana tabacum]
Length = 671
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ +VQ LE A
Sbjct: 478 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKVQDLEARA 531
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG TK+ A MLDE I+YV+ L+ QV+ L
Sbjct: 270 HSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFL 322
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
D+V R + P+S+A R RR RISERIR LQ LVP K +TA MLD A+ Y+
Sbjct: 312 DAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYI 371
Query: 218 KFLKTQVQSL 227
K L+ QV+ L
Sbjct: 372 KELQKQVKVL 381
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 272 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 326
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 180 DSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLA 239
Query: 233 N 233
+
Sbjct: 240 S 240
>gi|224066515|ref|XP_002302118.1| predicted protein [Populus trichocarpa]
gi|222843844|gb|EEE81391.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA-----AA 232
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L ++Q LE +
Sbjct: 463 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLLKKIQDLEACNKQMESE 522
Query: 233 NRPAGIGFPATLTT 246
R + P T+TT
Sbjct: 523 QRSRSVDPPQTITT 536
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 149 AAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARH---RRERISERIRILQRLVPGGTKM- 204
A+M+ + D+ K+R + +D S+ + H RRERISER+R+LQ LVPG K+
Sbjct: 43 ASMETSSVVLDTSPQDKKRKPR-EEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVT 101
Query: 205 DTASMLDEAIHYVKFLKTQVQSLE-RAAANRPAGIGF 240
A +LDE I+YV+ L+ QV+ L R A+ P GF
Sbjct: 102 GKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGF 138
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE-RAAANRPA 236
++ + RR RI+E+++ LQ L+P +K D ASMLD+AI Y+K L+ QVQ L R P
Sbjct: 52 LSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSMRNGLYLPP 111
Query: 237 G--IGFPATL 244
G G P TL
Sbjct: 112 GNLSGAPETL 121
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 124 NSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHR 183
N+ VP + Q S+ +T +AA++ D+V R + P+S+A R R
Sbjct: 286 NNGASVPPIKHQLSLPPSGKTSPEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVR 345
Query: 184 RERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ 225
R +ISERIR LQ LVP K +T+ MLD A+ Y+K L+ QV+
Sbjct: 346 RTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQVK 388
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
PK + + +++ R RR+RI+ER++ LQ L+P K D ASMLDEAI Y+K L+ Q
Sbjct: 1 PKGSKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQ 60
Query: 224 VQ 225
+Q
Sbjct: 61 LQ 62
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
D+V R + P+S+A R RR RISERIR LQ LVP K +TA MLD A+ Y+
Sbjct: 291 DAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYI 350
Query: 218 KFLKTQVQSL 227
K L+ QV+ L
Sbjct: 351 KELQKQVKVL 360
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE-RAAANRPA 236
++ + RR RI+E+++ LQ L+P +K D ASMLD+AI Y+K L+ QVQ L R P
Sbjct: 52 LSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSMRNGLYLPP 111
Query: 237 G--IGFPATL 244
G G P TL
Sbjct: 112 GNLSGAPETL 121
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 268 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE-RAAANRPA 236
++ + RR RI+E+++ LQ L+P +K D ASMLD+AI Y+K L+ QVQ L R P
Sbjct: 54 LSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSMRNGLYLPP 113
Query: 237 G--IGFPATL 244
G G P TL
Sbjct: 114 GNLSGAPETL 123
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 159 DSVKPPK--------RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASM 209
D KPP+ R + D S+A R RRE+ISER+ +LQ LVPG ++ A M
Sbjct: 180 DDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVM 239
Query: 210 LDEAIHYVKFLKTQVQSL 227
LDE I+YV+ L+ QV+ L
Sbjct: 240 LDEIINYVQSLQRQVEFL 257
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P PP RR+ S + + + R RR++I+E+++ LQ L+P K D SMLDEAI Y+
Sbjct: 7 PRRSTPPTRRSR--SAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYL 64
Query: 218 KFLKTQVQSL 227
K L+ Q+Q L
Sbjct: 65 KSLQLQLQML 74
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 205
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P PP RR+ S + + + R RR++I+E+++ LQ L+P K D SMLDEAI Y+
Sbjct: 7 PRRSTPPARRSR--SAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYL 64
Query: 218 KFLKTQVQSL 227
K L+ Q+Q L
Sbjct: 65 KSLQLQLQML 74
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RISER+R LQ LVP K +T+ MLD A+ Y+
Sbjct: 333 DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYI 392
Query: 218 KFLKTQVQSL 227
K L+ QV++L
Sbjct: 393 KDLQRQVETL 402
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 166 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 220
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D SVA R RR +I+ER+R LQ +VPG K M A MLDE I+YV+ L+ QV+ L
Sbjct: 162 DSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFL 216
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIH 215
PPK + + + + S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+
Sbjct: 294 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 353
Query: 216 YVKFLKTQVQSL 227
YV+ L+ QV+ L
Sbjct: 354 YVQSLQRQVEFL 365
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ +VPG K + AS+LDE I+Y++ L+ QV+ L
Sbjct: 59 DSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFL 113
>gi|255559476|ref|XP_002520758.1| conserved hypothetical protein [Ricinus communis]
gi|223540143|gb|EEF41720.1| conserved hypothetical protein [Ricinus communis]
Length = 668
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR 234
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE A NR
Sbjct: 483 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE--ARNR 537
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 160 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 214
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
PK + + +++ R RR+RI+ER++ LQ L+P K D ASMLDEAI Y+K L+ Q
Sbjct: 1 PKGSKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQ 60
Query: 224 VQ 225
+Q
Sbjct: 61 LQ 62
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 260 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 311
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 265 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 316
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 172 SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERA 230
++D S+A R RRE+ISE++ +LQ LVPG K+ A MLDE I YV+ L+ QV+ L
Sbjct: 164 ARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYVQSLQNQVEFLSMK 223
Query: 231 AANRPAGIGFPATLTTGNYP 250
A+ + + + G YP
Sbjct: 224 LASLNPMMMYEFGVDIGMYP 243
>gi|355320016|emb|CBY88797.1| basic helix-loop-helix transcription factor [Humulus lupulus]
Length = 695
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ +VQ LE
Sbjct: 479 MAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKVQDLE 529
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 178 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 232
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 260 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 311
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 188 SLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFL 239
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
S+A R RR++ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 209
Query: 236 AGIGF 240
+GF
Sbjct: 210 PELGF 214
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 159 DSVKPPK--------RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASM 209
D KPP+ R + D S+A R RRE+ISER+ +LQ LVPG ++ A M
Sbjct: 177 DDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVM 236
Query: 210 LDEAIHYVKFLKTQVQSL 227
LDE I+YV+ L+ QV+ L
Sbjct: 237 LDEIINYVQSLQRQVEFL 254
>gi|356536767|ref|XP_003536906.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 654
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR 234
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE A NR
Sbjct: 466 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELE--ARNR 520
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
D+V R + P+S+A R RR +ISERIR LQ LVP K +T+ MLD A+ Y+
Sbjct: 286 DAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYI 345
Query: 218 KFLKTQVQSLERAAAN 233
K L+ QV+ L+ + N
Sbjct: 346 KDLQKQVKVLKESQDN 361
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 253 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 304
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 640 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 692
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 162 KPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIH 215
+PPK R + D S+A R RRE+IS+R+++LQ LVPG K + A MLDE I+
Sbjct: 244 EPPKDYIHFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 303
Query: 216 YVKFLKTQVQSL 227
YV+ L+ QV+ L
Sbjct: 304 YVQSLQRQVEFL 315
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+IS+R+++LQ LVPG K + A MLDE I+YV+ L+ QV+ L A
Sbjct: 289 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLA 348
Query: 233 NRPAGIGFPATLTTGNYPPIIGKEYQQ 259
+ F N P ++ K+ Q
Sbjct: 349 TVNPQLDF------NNLPNLLPKDIHQ 369
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+++LQ +VPG K + AS+LDE I+Y++ L+ QV+ L
Sbjct: 132 DSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFL 186
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
S+A R RR++ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 209
Query: 236 AGIGF 240
+GF
Sbjct: 210 PELGF 214
>gi|327194899|gb|AEA34965.1| putative transcription factor BHLH2 [Ipomoea batatas]
Length = 667
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE A
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAA 527
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRERISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 257 HSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFL 309
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 253 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 304
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+Y++ L+ QV+ L
Sbjct: 60 SLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFL 111
>gi|223702418|gb|ACN21640.1| putative basic helix-loop-helix protein BHLH19 [Lotus japonicus]
Length = 307
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 237
+A R RRE++S+ L ++PG KMD AS+L AI VK L+ QVQ+LE AA + G
Sbjct: 128 IAERKRREKLSQSFVALSAILPGLKKMDKASILGGAIRSVKQLQEQVQTLEEQAAKKRTG 187
Query: 238 IG 239
G
Sbjct: 188 SG 189
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 139 AAMRETIFRVAAM-QPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
AM T +A M + + + D V R + P+S+A R RR RISE++R LQ L
Sbjct: 235 GAMAGTALEMAGMDRYMQLQQDQVPFKVRAKRGCATHPRSIAERERRTRISEKLRKLQDL 294
Query: 198 VPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE 228
VP K TA MLD A+ ++K L++++Q+L+
Sbjct: 295 VPNMDKQTSTADMLDLAVEHIKGLQSELQALK 326
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 162 KPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIH 215
+PPK R + D S+A R RRE+IS+R+++LQ LVPG K + A MLDE I+
Sbjct: 244 EPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 303
Query: 216 YVKFLKTQVQSLERAAANRPAGIGFPATLTTGNYPPIIGKEYQQ 259
YV+ L+ QV+ L A + F N P ++ K+ Q
Sbjct: 304 YVQSLQRQVEFLSMKLATVNPQLDF------NNLPNLLPKDMHQ 341
>gi|163311838|gb|ABY26932.1| putative anthocyanin transcriptional regulator [Ipomoea coccinea]
Length = 661
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE A
Sbjct: 466 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAA 518
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 268 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 139 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 193
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG +K + A MLDE I+YV+ L+ QV+ L
Sbjct: 277 SLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 328
>gi|163311840|gb|ABY26933.1| putative anthocyanin transcriptional regulator [Ipomoea trifida]
Length = 676
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE A
Sbjct: 484 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAA 536
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query: 165 KRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+RR +I +++ R RR+RI++++R LQ L+P K+D ASML EAI Y+K L+ QV
Sbjct: 379 RRRATEI----HNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQV 434
Query: 225 Q 225
Q
Sbjct: 435 Q 435
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RISERIR LQ LVP K TA MLD A+ Y+
Sbjct: 297 DSVPCKIRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYI 356
Query: 218 KFLKTQVQSL 227
K L+ Q ++L
Sbjct: 357 KDLQKQFKTL 366
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+IS+R+++LQ LVPG K + A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 288 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLA 347
Query: 231 AANRPAGIGFPATLTTGNYPPIIGKEYQQ 259
N L N P ++ K+ Q
Sbjct: 348 TVN--------PQLDFNNLPNLLAKDMHQ 368
>gi|168041399|ref|XP_001773179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675538|gb|EDQ62032.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 550
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP-- 235
VA R RR++++ER+ L+ LVP TKMD AS+L +AI YVK L+ QV+ L+ +
Sbjct: 319 VAERKRRKKLNERLYSLRALVPKITKMDRASILGDAIEYVKELQQQVKELQEELLDSKEN 378
Query: 236 ----AGIGF 240
AG+GF
Sbjct: 379 DMGTAGLGF 387
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 162 KPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIH 215
+PPK R + D S+A R RRE+IS+R+++LQ LVPG K + A MLDE I+
Sbjct: 256 EPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 315
Query: 216 YVKFLKTQVQSL 227
YV+ L+ QV+ L
Sbjct: 316 YVQSLQRQVEFL 327
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 147 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 201
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ + RR +I+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 33 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 82
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 258 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 309
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIH 215
PPK + + + + S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+
Sbjct: 213 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 272
Query: 216 YVKFLKTQVQSL 227
YV+ L+ QV+ L
Sbjct: 273 YVQSLQRQVEFL 284
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RR +I+ER+R LQ +VPG K M A+MLDE I+YV+ L+ QV+ L
Sbjct: 1037 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 1091
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query: 165 KRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+RR +I +++ R RR+RI++++R LQ L+P K+D ASML EAI Y+K L+ QV
Sbjct: 373 RRRATEI----HNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQV 428
Query: 225 Q 225
Q
Sbjct: 429 Q 429
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 162 KPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIH 215
+PPK R + D S+A R RRE+IS+R+++LQ LVPG K + A MLDE I+
Sbjct: 256 EPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 315
Query: 216 YVKFLKTQVQSL 227
YV+ L+ QV+ L
Sbjct: 316 YVQSLQRQVEFL 327
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RR +I+ER+R LQ +VPG K M A+MLDE I+YV+ L+ QV+ L
Sbjct: 154 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 208
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 160 SVKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEA 213
+V+PPK R + D S+A R RRE+IS+R++ LQ LVPG K + A MLDE
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 214 IHYVKFLKTQVQSL 227
I+YV+ L+ QV+ L
Sbjct: 206 INYVQSLQQQVEFL 219
>gi|356502813|ref|XP_003520210.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 646
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR 234
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE A NR
Sbjct: 458 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELE--ARNR 512
>gi|338192055|gb|AEI84807.1| bHLH transcription factor [Malus x domestica]
Length = 709
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 483 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRNKIQDLE 533
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 160 SVKPPK-----RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEA 213
+V+PPK R + D S+A R RRE+IS+R++ LQ LVPG K + A MLDE
Sbjct: 148 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 207
Query: 214 IHYVKFLKTQVQSL 227
I+YV+ L+ QV+ L
Sbjct: 208 INYVQSLQQQVEFL 221
>gi|163311842|gb|ABY26934.1| putative anthocyanin transcriptional regulator [Ipomoea lacunosa]
Length = 669
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERA 230
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE A
Sbjct: 477 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAA 529
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+I ER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 310 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERAAAN 233
S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+YV+ L+ QV+ S++ AA N
Sbjct: 88 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVN 147
>gi|302398605|gb|ADL36597.1| BHLH domain class transcription factor [Malus x domestica]
Length = 709
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 483 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRNKIQDLE 533
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 269 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 320
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
D+V R + P+S+A R RR +ISERIR LQ LVP K +TA MLD A+ Y+
Sbjct: 319 DAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYI 378
Query: 218 KFLKTQVQSLE--RAAANRPAG 237
K L+ QV+ L RA+ AG
Sbjct: 379 KDLQKQVKVLNDGRASCTCSAG 400
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ L PG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 218 SLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFL 269
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG +K + A MLDE I+YV+ L+ QV+ L
Sbjct: 274 HSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 326
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG +K + A MLDE I+YV+ L+ QV+ L
Sbjct: 274 HSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 326
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
P+S+A R RR RISER+R LQ L P K +TA MLD A+ Y+K L+ QV++L+ A
Sbjct: 360 PRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQVKTLKDTKA 418
>gi|163311844|gb|ABY26935.1| putative anthocyanin transcriptional regulator [Ipomoea violacea]
Length = 684
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 237
+A R RRE++++R IL+ LVP TKMD AS+L + I YVK L+ ++Q LE AA PA
Sbjct: 489 LAERRRREKLNKRFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELE-AARGSPAE 547
Query: 238 IGFPATLTTGN 248
+ T+T G+
Sbjct: 548 V-HRQTITGGD 557
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRE+I++R+++LQ LVPG K+ TA +LDE I++V+ L+ QV+ L R A
Sbjct: 186 DSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQCQVEFLSMRLA 245
Query: 232 ANRPAGIGF---------PATLTTGNYPPIIGKEYQQPAVRNGALH 268
A P I F +L N+P ++ A NG H
Sbjct: 246 AVNPR-IDFNLDSMLSAESGSLIDSNFPGMVMPLMWPEAEVNGNRH 290
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 36 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 90
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 15/139 (10%)
Query: 104 PTYFSYSPNERYWRGGAGDSNSSTG---VPLSQKQNSMAAMRETIFRV-----AAMQPIH 155
P+ +P +R G GDS+ +TG +P +++ + ++ + A+ +
Sbjct: 230 PSIKGLNPKKRKRNGQDGDSDKATGTLELPSETAKDNCESRKKGKQQTSSTAKASGKNAK 289
Query: 156 IDPDSVKPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTAS 208
+ PP V + + + S+A R RRE+ISER++ LQ LVPG K+ A
Sbjct: 290 QGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 349
Query: 209 MLDEAIHYVKFLKTQVQSL 227
MLDE I+YV+ L+ QV+ L
Sbjct: 350 MLDEIINYVQSLQQQVEFL 368
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 381 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 12/89 (13%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D +A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ S++
Sbjct: 160 DSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 219
Query: 231 AANRPAGIGFPATLTTGNYPPIIGKEYQQ 259
A N G A +PP K+Y Q
Sbjct: 220 AVNSRLNTGIEA------FPP---KDYGQ 239
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+I ER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 308 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 362
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHY 216
PD + RR + D S+A R RRE+ISER++ILQ L PG K + A +LDE I+Y
Sbjct: 109 PDYIHVRARRGQ--ATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINY 166
Query: 217 VKFLKTQVQ--SLERAAAN-----RPAGIGFPA 242
++ L+ QV+ S++ A N P GFP+
Sbjct: 167 IQSLQRQVEFLSMKLEAVNSRMNTNPTIDGFPS 199
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
R RR+RI+E++R LQ L+P K D AS+LDEAI Y+K L+ Q+Q
Sbjct: 245 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQLQ 289
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+I+ ++R LQ LVPG K M A ML+E I+YV L+ QV+ S+E A
Sbjct: 158 DSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQVEFLSMELA 217
Query: 231 AA 232
AA
Sbjct: 218 AA 219
>gi|224994136|dbj|BAH28881.1| bHLH transcription factor LjTT8 [Lotus japonicus]
Length = 678
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELE 525
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+ RR +I+ER++ LQ++VPG +K + AS LD+ IHY+K L+ QVQ++
Sbjct: 186 KRRRHKINERLKTLQQIVPGCSKSNQASTLDQTIHYMKSLQHQVQAM 232
>gi|401782370|dbj|BAM36702.1| bHLH transcriptional factor AN1 homolog [Rosa hybrid cultivar]
Length = 702
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 480 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 530
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I YV+ L+ QV+ L A
Sbjct: 189 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLA 248
Query: 233 N 233
+
Sbjct: 249 S 249
>gi|3193326|gb|AAC19308.1| contains similarity to transcriptional activators such as Ra-like
and myc-like regulatory R proteins [Arabidopsis
thaliana]
gi|7267092|emb|CAB80763.1| putative transcriptional regulator [Arabidopsis thaliana]
Length = 329
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
RR++I++R++ LQ+LVP +K D ASMLDE I Y+K L+ QV + R
Sbjct: 155 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSR 201
>gi|332801237|gb|AEE99260.1| anthocyanin 1-like protein [Nicotiana tomentosiformis]
Length = 683
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L +VQ LE A
Sbjct: 489 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLHKKVQDLEARA 542
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
S+A R RR++ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L +
Sbjct: 43 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVN 102
Query: 236 AGIGF 240
+GF
Sbjct: 103 PELGF 107
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RR +I+ER+R LQ +VPG K M A+MLDE I+YV+ L+ QV+ L
Sbjct: 1048 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 1102
>gi|332801233|gb|AEE99258.1| anthocyanin 1b [Nicotiana tabacum]
Length = 683
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAA 231
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L +VQ LE A
Sbjct: 489 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLHKKVQDLEARA 542
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
P+S+A R RR +ISER++ LQ LVP K +T+ MLDE + YVK L+ QVQ L
Sbjct: 393 PRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQRQVQEL 446
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 67 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 126
Query: 231 AAN 233
A N
Sbjct: 127 AVN 129
>gi|356514380|ref|XP_003525884.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 347
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 41/57 (71%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR 234
++ R RRE++S+R L ++PG KMD A++L++AI YVK L+ +V++LE A ++
Sbjct: 179 ISERKRREKLSQRFIALSAIIPGLKKMDKATVLEDAIKYVKQLQERVKTLEEQAVDK 235
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I YV+ L+ QV+ L A
Sbjct: 189 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLA 248
Query: 233 N 233
+
Sbjct: 249 S 249
>gi|184161316|gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]
Length = 701
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 497 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 547
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 175 PQSVAARHRRERISERIRILQRLVPG-GTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 233
P+S+A R RR +ISER++ LQ LVP + +TA MLD+A+ YVK L+ QVQ L + A
Sbjct: 73 PRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQVQELSKTVAE 132
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+I ER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 310 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 138 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFL 192
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 314 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 365
>gi|225436998|ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis vinifera]
Length = 696
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 492 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 542
>gi|324022722|gb|ADY15317.1| transparent testa 8 [Prunus avium]
Length = 565
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 423 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 473
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Query: 162 KPPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAI 214
+PPK+ + + + D S+A R RRE+ISER++ILQ LVPG K + A +LDE I
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 178
Query: 215 HYVKFLKTQVQSL 227
+Y++ L+ QV+ L
Sbjct: 179 NYIQSLQRQVEFL 191
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>gi|296086734|emb|CBI32369.3| unnamed protein product [Vitis vinifera]
Length = 620
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 416 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 466
>gi|3757520|gb|AAC64222.1| bHLH transcription factor [Arabidopsis thaliana]
Length = 467
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE--------- 228
+A R RR+++++R+ L+ LVP TK+D AS+L +AI+YVK L+ + + L+
Sbjct: 213 MAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSET 272
Query: 229 RAAANRP-AGIGFPATLTTGNYPPI 252
+NRP G+ T+ TG +P +
Sbjct: 273 EDGSNRPQGGMSLNGTVVTGFHPGL 297
>gi|302820581|ref|XP_002991957.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
gi|300140199|gb|EFJ06925.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
Length = 551
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 7/66 (10%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE-------RA 230
VA R RR++++ER+ L+ LVP TKMD AS+L +AI YVK L+ QV+ L+ +A
Sbjct: 338 VAERKRRKKLNERLYSLRALVPKITKMDRASILGDAIEYVKELQQQVKELQDELEDDSQA 397
Query: 231 AANRPA 236
A N PA
Sbjct: 398 ANNIPA 403
>gi|223702440|gb|ACN21651.1| putative basic helix-loop-helix protein BHLH15 [Lotus japonicus]
Length = 274
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 162 KPPKRRNVKISKDPQSVA-ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KPP ++ +++P S A+ R+E++ ERI LQ+LV K DTAS+L EA Y+KFL
Sbjct: 146 KPPYKKTK--AENPTSTGHAKKRKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIKFL 203
Query: 221 KTQVQSL 227
+ QVQ L
Sbjct: 204 QDQVQVL 210
>gi|73760266|dbj|BAE20058.1| bHLH transcription factor [Lilium hybrid division I]
Length = 680
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAG 237
+A R RRE+++ER IL+ LVP TKMD AS+L + I YV L+ ++Q LE A NR G
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVNQLRRRIQDLE--ARNRQMG 532
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
S+A R RR++ISER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L +
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVN 209
Query: 236 AGIGF 240
+GF
Sbjct: 210 PELGF 214
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 23/110 (20%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+I+ R+++LQ LVPG K+ TA +LD+ I++V+ L+ +V+ S++ A
Sbjct: 201 DSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNEVEILSMKLA 260
Query: 231 AANRPAGIGFPATLTT-------GNYPPIIG-------------KEYQQP 260
A N + L T N+PP + ++YQQP
Sbjct: 261 AVNPVIDFNLDSLLATEGVTPMDCNFPPTVAPVMWPEIPQNGNRQQYQQP 310
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ + RR RI+E+++ LQ L+P +K D ASMLD+AI Y+K L+ QVQ L
Sbjct: 53 LSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 102
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 131 LSQKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISER 190
LS ++ + A RE +Q H D V R + P+S+A R RR RISE+
Sbjct: 254 LSNYESQLVAPREMAGVEKYLQMQH---DQVPFRVRAKRGCATHPRSIAERERRTRISEK 310
Query: 191 IRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL-----------ERAAANRPA 236
+R LQ LVP K T+ MLD A+ ++K L++Q+Q+L ++A+ NRPA
Sbjct: 311 LRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKEDKEKCTCSCKQASRNRPA 368
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 100 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFL 154
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHY 216
PD V + R + + D S+A R RRE+I R+R LQ LVPG K A MLDE I+Y
Sbjct: 196 PDEVIHVRARRGQ-ATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINY 254
Query: 217 VKFLKTQVQSLERAAA 232
V L+ QV+ L R A
Sbjct: 255 VHSLQNQVEFLSRELA 270
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQ 225
D S+A R RRE+IS R+++LQ LVPG K+ A +LDE I YV+FLK +VQ
Sbjct: 170 DSHSLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQFLKDRVQ 222
>gi|115453363|ref|NP_001050282.1| Os03g0391700 [Oryza sativa Japonica Group]
gi|40539023|gb|AAR87280.1| expressed protein (with alternative splicing) [Oryza sativa
Japonica Group]
gi|108708576|gb|ABF96371.1| expressed protein [Oryza sativa Japonica Group]
gi|108708577|gb|ABF96372.1| expressed protein [Oryza sativa Japonica Group]
gi|113548753|dbj|BAF12196.1| Os03g0391700 [Oryza sativa Japonica Group]
gi|215686766|dbj|BAG89616.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 315
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+ RRERI E + L+++VPGG D ++LDEAI Y+K+LK +V++L
Sbjct: 264 KRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTL 310
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 152 QPIH-IDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTAS-M 209
Q +H I DSV R + P+S+A R RR RIS +++ LQ LVP K + S M
Sbjct: 251 QLMHNIPQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDM 310
Query: 210 LDEAIHYVKFLKTQVQSLERAAANRPAGI 238
LD A+ ++K L+TQVQ L N G
Sbjct: 311 LDLAVQHIKGLQTQVQKLHEDLENCTCGC 339
>gi|45735905|dbj|BAD12937.1| bHLH transcription factor (bHLH123)-like protein [Oryza sativa
Japonica Group]
Length = 418
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
P S+AA+ R+E++ +R+ LQ+LV K DTAS+L E I Y+KFL QV +L
Sbjct: 294 PASLAAKVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGAL 346
>gi|255549295|ref|XP_002515701.1| DNA binding protein, putative [Ricinus communis]
gi|223545138|gb|EEF46648.1| DNA binding protein, putative [Ricinus communis]
Length = 244
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 171 ISKDPQSVAARHR-RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+S +P R R R+ + ++ RILQ+L+P +MDTA+ML EA +Y+ FL+ QV++L+
Sbjct: 100 LSSNPSQKNKRQRCRQTMGDKFRILQKLMPWDKRMDTATMLAEAYNYINFLQAQVKALQ 158
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+I ER+++LQ LVPG +K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 265 DSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|147772652|emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]
Length = 668
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 464 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 514
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+ RR +I+ER + LQ++VPG +K + AS LD+ IHY+K L+ QVQ++
Sbjct: 189 KRRRHKINERFKTLQQIVPGCSKSNQASTLDQTIHYMKSLQHQVQAM 235
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRERI ER++ILQ LVPG K + A LDE I+Y++ L+ QV+ L
Sbjct: 152 DSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFL 206
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 12/74 (16%)
Query: 175 PQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL------ 227
P+S+A R RR RISE++R LQ LVP K T+ MLD A+ ++K L++Q+Q+L
Sbjct: 144 PRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKEDKEK 203
Query: 228 -----ERAAANRPA 236
++A+ NRPA
Sbjct: 204 CTCSCKQASRNRPA 217
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+IS++++ LQ +VPG TK+ A MLDE I+Y
Sbjct: 136 PDYIHVRARRGE--ATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINY 193
Query: 217 VKFLKTQVQSL 227
V+ L+ QV+ L
Sbjct: 194 VQSLQQQVEFL 204
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+IS++++ LQ LVPG K+ A MLDE I+Y
Sbjct: 185 PDYIHVRARRGQ--ATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINY 242
Query: 217 VKFLKTQVQSLERAAANRPAGIGFPATLTTGNYPPIIGKEY 257
V+ L+ QV+ L A F N +GKE+
Sbjct: 243 VQSLQRQVEFLSLKLATMNPRTDF-------NLDTFLGKEF 276
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ + RR RI+E+++ LQ L+P +K D ASMLD+AI Y+K L+ QVQ L
Sbjct: 39 LSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 88
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 135 QNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRIL 194
Q S+ A + +AA++ DSV R + P+S+A R RR +ISERIR L
Sbjct: 294 QFSLPAGSKPSPEIAAIEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTKISERIRKL 353
Query: 195 QRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGFP 241
Q LVP K +T+ MLD A+ Y+K L+ QV+ + A G P
Sbjct: 354 QELVPNMEKQTNTSDMLDLAVDYIKELQMQVKVMNDGRAGCTCSAGRP 401
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ + RR +I+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 112 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 161
>gi|163311836|gb|ABY26931.1| putative anthocyanin transcriptional regulator [Ipomoea quamoclit]
Length = 659
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 464 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELE 514
>gi|47232558|dbj|BAD18982.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
gi|125659425|dbj|BAF46858.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
Length = 665
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 473 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELE 523
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.127 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,203,960,621
Number of Sequences: 23463169
Number of extensions: 166400011
Number of successful extensions: 560506
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2575
Number of HSP's successfully gapped in prelim test: 642
Number of HSP's that attempted gapping in prelim test: 556600
Number of HSP's gapped (non-prelim): 3791
length of query: 272
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 132
effective length of database: 9,074,351,707
effective search space: 1197814425324
effective search space used: 1197814425324
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)