BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024139
(272 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1
Length = 241
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 135/219 (61%), Gaps = 38/219 (17%)
Query: 17 MMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIASSTPHFVDNNSPHIVSS 76
M +MM QM+K PEF C N + DH + T + +ST H+ ++S + +
Sbjct: 6 MNMMMHQMEKLPEF---CNPN--SSFFSPDHNN----TYPFLFNST-HYQSDHS--MTNE 53
Query: 77 PSF---SNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQ 133
P F S +L+N + S SPN Y + + +
Sbjct: 54 PGFRYGSGLLTNPS--------------------SISPNTAY---SSVFLDKRNNSNNNN 90
Query: 134 KQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRI 193
+MAAMRE IFR+A MQPIHIDP++VKPPKRRNV+ISKDPQSVAARHRRERISERIRI
Sbjct: 91 NGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRI 150
Query: 194 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 232
LQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSLE A
Sbjct: 151 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEQAV 189
>sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1
Length = 231
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/226 (48%), Positives = 130/226 (57%), Gaps = 45/226 (19%)
Query: 17 MMVMMMQMDKFPEFYGACTNNDVAELLPADHTSATITTNSNIASSTPHFVDNNSPHIVSS 76
M +MM QM+K PE + N + + + SN + P F + H+
Sbjct: 8 MNMMMQQMEKLPEHFSNSNPNPNPHNI-------MMLSESN---THPFFFNPTHSHL--- 54
Query: 77 PSFSNMLSNSNTSLNGTSITAAQGTSIPTYFSYSPNER----YWRGGAGDSNSSTGVPLS 132
F + + LN F Y+P+ RGG D+
Sbjct: 55 -PFDQTMPHHQPGLN---------------FRYAPSPSSSLPEKRGGCSDN--------- 89
Query: 133 QKQNSMAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIR 192
+MAAMRE IFR+A MQPIHIDP+SVKPPKR+NV+ISKDPQSVAARHRRERISERIR
Sbjct: 90 ---ANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIR 146
Query: 193 ILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGI 238
ILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSLE A G+
Sbjct: 147 ILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGM 192
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 88/125 (70%), Gaps = 4/125 (3%)
Query: 108 SYSPNERYWRGGAGDSNSSTGVPLSQK----QNSMAAMRETIFRVAAMQPIHIDPDSVKP 163
S P RGG+ + + LS ++A M+E I+R AA +P++ + V+
Sbjct: 208 SKKPRTEKERGGSSNISFQHSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEK 267
Query: 164 PKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQ 223
PKR+NVKIS DPQ+VAAR RRERISE+IR+LQ LVPGGTKMDTASMLDEA +Y+KFL+ Q
Sbjct: 268 PKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQ 327
Query: 224 VQSLE 228
V++LE
Sbjct: 328 VKALE 332
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 140 AMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 199
AM+E + +A MQP+ IDP +V P RRNV+IS DPQ+V AR RRERISE+IRIL+R+VP
Sbjct: 87 AMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVP 146
Query: 200 GGTKMDTASMLDEAIHYVKFLKTQVQSLE 228
GG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 147 GGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>sp|Q9LXD8|HEC3_ARATH Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1
Length = 224
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 81/98 (82%)
Query: 138 MAAMRETIFRVAAMQPIHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 197
+ AM+E ++++AAMQ + IDP +VK PKRRNV+IS DPQSVAARHRRERISERIRILQRL
Sbjct: 92 LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151
Query: 198 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 235
VPGGTKMDTASMLDEAI YVKFLK Q++ L P
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTP 189
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 170 KISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
K+S DPQSVAAR RR RIS+R R+L+ LVPGG+KMDT SML++AIHYVKFLK QV +L +
Sbjct: 39 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLHQ 97
Query: 230 AA 231
AA
Sbjct: 98 AA 99
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 171 ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQV 224
+S DPQSVAAR RR RIS+R +ILQ +VPGG KMDT SMLDEAI YVKFLK Q+
Sbjct: 43 LSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQI 96
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+HYVKFL+ Q++ L
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
Query: 160 SVKPPKRRNVKIS-------KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 212
S KP N KI KDPQS+AA++RRERISER+++LQ LVP GTK+D +ML++
Sbjct: 189 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 248
Query: 213 AIHYVKFLKTQVQSL 227
AI YVKFL+ QV+ L
Sbjct: 249 AIGYVKFLQVQVKVL 263
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 48/55 (87%)
Query: 173 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
KDPQS+AA++RRERISER++ILQ LVP GTK+D +ML++AI YVKFL+ QV+ L
Sbjct: 203 KDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVL 257
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 53/68 (77%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
S+K + N I+ DPQS+ AR RRERI++R++ LQ LVP GTK+D ++ML++A+HYVKF
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKF 186
Query: 220 LKTQVQSL 227
L+ Q++ L
Sbjct: 187 LQLQIKLL 194
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 160 SVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 219
SVK R + DPQS+ AR RRE+I+ER++ LQ LVP GTK+D ++ML+EA+HYVKF
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 221
Query: 220 LKTQVQSL 227
L+ Q++ L
Sbjct: 222 LQLQIKLL 229
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
DPQS+ AR RRERI+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%)
Query: 161 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KP R + DP S+A R RRERI+ER++ LQ LVP G K D ASMLDE I YVKFL
Sbjct: 126 TKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFL 185
Query: 221 KTQVQSL 227
+ QV+ L
Sbjct: 186 QLQVKVL 192
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 7/71 (9%)
Query: 163 PPKRRNVKI------SKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY 216
PP+ R KI + DP S+A R RRERI+ER++ LQ LVP G K D ASMLDE I Y
Sbjct: 131 PPQSR-TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDY 189
Query: 217 VKFLKTQVQSL 227
VKFL+ QV+ L
Sbjct: 190 VKFLQLQVKVL 200
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 162 KPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 221
KP R + DP S+A R RRERI+ER++ LQ LVP K D ASMLDE I YV+FL+
Sbjct: 96 KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
Query: 222 TQVQSL 227
QV+ L
Sbjct: 156 LQVKVL 161
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR-PA 236
++ R RR+RI+E++R LQ L+P K+D ASMLDEAI Y+K L+ QVQ + A+ P
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPP 409
Query: 237 GIGFPATLTTGNYP 250
+ FP + G+YP
Sbjct: 410 AVMFPPGM--GHYP 421
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 148 VAAMQPIHIDP---DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM 204
++ M +++D DSV R + P+S+A R RR RIS+RIR LQ LVP K
Sbjct: 161 ISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQ 220
Query: 205 -DTASMLDEAIHYVKFLKTQVQSL 227
+TA ML+EA+ YVK L++Q+Q L
Sbjct: 221 TNTADMLEEAVEYVKALQSQIQEL 244
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RIS+RIR LQ LVP K +TA ML+EA+ YV
Sbjct: 178 DSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYV 237
Query: 218 KFLKTQVQSL 227
K L+ Q+Q L
Sbjct: 238 KVLQRQIQEL 247
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 98 AQGTSIPTYFSYSPNERYWRGGAGDSNSSTGVPLSQKQNSMAAMRETIFRVAAMQPIHID 157
AQ +S P + S E ++ +G + SS G +S+ A R A Q
Sbjct: 33 AQPSSPPKSTNVSSAETFFPSVSGGAVSSVGYGVSETGQDKYAFEHK--RSGAKQ----- 85
Query: 158 PDSVKPPKRRNVKISKDPQ--SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 215
R ++K + D Q +++ + RR +I+E+++ LQ+L+P K D ASMLDEAI
Sbjct: 86 --------RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIE 137
Query: 216 YVKFLKTQVQSL 227
Y+K L+ QVQ+L
Sbjct: 138 YLKQLQLQVQTL 149
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER+R LQ LVPG K+ A MLDE I+YV+ L+TQV+ L
Sbjct: 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFL 199
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPG-GTKMDTASMLDEAIHYV 217
DS+ R + P+S+A R RR +ISER+R LQ LVP T+ +TA MLD A+ Y+
Sbjct: 298 DSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYI 357
Query: 218 KFLKTQVQSLERAAA 232
K L+ QV++LE + A
Sbjct: 358 KDLQEQVKALEESRA 372
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 230
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ +
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 326
Query: 231 AANRPAGIGFPATLTTGNYP 250
+ N A L+ +P
Sbjct: 327 SVNTRLDFNMDALLSKDIFP 346
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
++ R RR+RI+ER++ LQ L+P K D ASMLDEAI Y+K L+ Q+Q +
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 181 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLER 229
R RR++I++R++ LQ+LVP +K D ASMLDE I Y+K L+ QV + R
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSR 271
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLERAAA 232
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ Q++ L A
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLA 240
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER+R+LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 218 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 269
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+++ + RR RI+E+++ LQ L+P K D ASMLDEAI Y+K L+ QVQ L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 159 DSVKPPK--------RRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASM 209
D KPP+ R + D S+A R RRE+ISER+ +LQ LVPG ++ A M
Sbjct: 177 DDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVM 236
Query: 210 LDEAIHYVKFLKTQVQSL 227
LDE I+YV+ L+ QV+ L
Sbjct: 237 LDEIINYVQSLQRQVEFL 254
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+ISER++ILQ LVPG K + A +LDE I+Y++ L+ QV+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RR +I+ER+R LQ +VPG K M A+MLDE I+YV+ L+ QV+ L
Sbjct: 154 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 208
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+I ER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 310 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 177 SVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RR +I+ER++ LQ +VPG K M A+MLDE I+YV+ L+ QV+ L
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110
PE=2 SV=2
Length = 453
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Query: 183 RRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE----RAAANRPA 236
R+E++ +RI LQ+LV K DTAS+L EAI Y+KFL++Q+++L RA+ NRP
Sbjct: 334 RKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPG 391
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE--------- 228
+A R RR+++++R+ L+ LVP TK+D AS+L +AI+YVK L+ + + L+
Sbjct: 317 MAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSET 376
Query: 229 RAAANRP-AGIGFPATLTTGNYPPI 252
+NRP G+ T+ TG +P +
Sbjct: 377 EDGSNRPQGGMSLNGTVVTGFHPGL 401
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 176 QSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ Q++ L
Sbjct: 234 HSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 286
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 159 DSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYV 217
DSV R + P+S+A R RR RISER+R LQ LVP K +T+ MLD A+ Y+
Sbjct: 273 DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYI 332
Query: 218 KFLKTQVQSLERAAAN 233
K L+ Q + L AN
Sbjct: 333 KDLQRQYKILNDNRAN 348
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+I+ER++ LQ LVPG K M A MLD I YV+ L+ Q++ L
Sbjct: 113 DSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFL 167
>sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128
PE=1 SV=1
Length = 362
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 154 IHIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTAS-MLDE 212
+ + DSV R + P+S+A R RR RIS +++ LQ LVP K + S MLD
Sbjct: 272 MQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDL 331
Query: 213 AIHYVKFLKTQVQSLERAAANRPAGI 238
A+ ++K L+ Q+Q+L++ N G
Sbjct: 332 AVQHIKGLQHQLQNLKKDQENCTCGC 357
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 227
+A R RRE+I+E+++ LQ+L+P K S LD+AI YVK L++Q+Q +
Sbjct: 262 LAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHY 216
PD + RR + D S+A R RRE+IS++++ LQ +VPG K+ A MLDE I+Y
Sbjct: 136 PDYIHVRARRGE--ATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193
Query: 217 VKFLKTQVQSL 227
V+ L+ QV+ L
Sbjct: 194 VQSLQQQVEFL 204
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 227
D S+A R RRE+IS++++ LQ +VPG K+ A MLDE I+YV+ L+ QV+ L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 174 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLE-RAA 231
D S+A R RRE+I+ R+++LQ LVPG K+ TA +LDE I++V+ L+ QV+ L R A
Sbjct: 194 DNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLA 253
Query: 232 ANRP 235
A P
Sbjct: 254 AVNP 257
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 158 PDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 217
P S++P R + DP S+A R RRERI+ERIR LQ LVP K D A+M+DE + YV
Sbjct: 139 PTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYV 198
Query: 218 KFLKTQVQSLERAAANRPAGIGFPATLTT 246
KFL+ QV+ L + +R G G A L T
Sbjct: 199 KFLRLQVKVL---SMSRLGGAGAVAPLVT 224
>sp|Q9ZW81|BH129_ARATH Transcription factor bHLH129 OS=Arabidopsis thaliana GN=BHLH129
PE=2 SV=2
Length = 297
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 140 AMRETIFRVAAMQPI-HIDPDSVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLV 198
+M +T +A M+ + +I DSV R + P+S+A R RR RIS +++ LQ LV
Sbjct: 207 SMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELV 266
Query: 199 PGGTKMDT-ASMLDEAIHYVKFLKTQVQ 225
P K + A MLD A+ ++K L+ QV+
Sbjct: 267 PNMDKQTSYADMLDLAVEHIKGLQHQVE 294
>sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113
PE=2 SV=1
Length = 270
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 162 KPPKRRNVKISKDPQSVA-ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
KP K+ K +++ SV A+ R+ER+ ERI LQ+LV K D AS+L EA+ Y+KFL
Sbjct: 136 KPGKKG--KRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFL 193
Query: 221 KTQVQSL 227
+ Q+Q L
Sbjct: 194 QDQIQVL 200
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 120 AGDSNSSTGVPLSQKQNSMAAMRE--TIFRVAAMQPIHIDPDS--------VKPPKRRNV 169
G+ +S +S+ N+ M T+ R AA H D ++ V+PP+++
Sbjct: 341 CGNESSKKRTSVSKGSNNDEGMLSFSTVVRSAANDSDHSDLEASVVKEAIVVEPPEKKPR 400
Query: 170 KISKDPQS---------VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 220
K + P + A R RRE++++R L+ +VP +KMD AS+L +AI Y+ L
Sbjct: 401 KRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINEL 460
Query: 221 KTQVQSLE 228
K+++Q E
Sbjct: 461 KSKLQQAE 468
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 225
++ R RR++I+E ++ LQ L+P TK D +SMLD+ I YVK L++Q+Q
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 178 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANR 234
+A R RRE++++R L LVPG KMD AS+L +A+ ++K+L+ +V LE R
Sbjct: 155 IAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKER 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.127 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,792,932
Number of Sequences: 539616
Number of extensions: 3919675
Number of successful extensions: 14911
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 14484
Number of HSP's gapped (non-prelim): 488
length of query: 272
length of database: 191,569,459
effective HSP length: 116
effective length of query: 156
effective length of database: 128,974,003
effective search space: 20119944468
effective search space used: 20119944468
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)