BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024142
(272 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255573032|ref|XP_002527446.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223533181|gb|EEF34938.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 322
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/267 (74%), Positives = 222/267 (83%), Gaps = 3/267 (1%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR D+ITPGVDA GNP+DPRKIQ+HFE+FYEDLF+EL+KYGEI+SLN+CDNLADHMVG
Sbjct: 51 MYQRPDIITPGVDANGNPIDPRKIQQHFEEFYEDLFQELSKYGEIDSLNVCDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEE A AL++LSGRFYAGRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEDAENALRNLSGRFYAGRPIIADFSPVTDFREATCRQYEENACNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHS--GHGRRYDDRDKYYE 178
MHLKRI R+LR QLFGRYRRR S S SRSRS RHRSHE+ H G GRRYDD D+Y
Sbjct: 171 MHLKRIGRELRHQLFGRYRRRRSHSHSRSRSLQRHRSHEEYYHVGRGSGRRYDDEDRYRG 230
Query: 179 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYK-GNT 237
SRSRR+RS SP R RSRSPG RR SPVREGSEERRA+I QWN+E+EQQ+E K NT
Sbjct: 231 SRSRRYRSISPDQSRRRSRSPGLRRNRSPVREGSEERRARIAQWNKEKEQQQETAKQVNT 290
Query: 238 DGGNNDQGINNDGLMQNGNGYHSYKQQ 264
D GNN G+ ++G QNGN H Y+QQ
Sbjct: 291 DSGNNTSGVGDNGYKQNGNKDHGYQQQ 317
>gi|13278055|gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
Length = 310
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/266 (72%), Positives = 211/266 (79%), Gaps = 8/266 (3%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVD QG PLDPRKIQ+HFEDFYEDLFEEL+KYGEIESLNICDNLADHMVG
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEE A AL++LSGRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEHAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHS--GHGRRYDDRDKYYE 178
MHLK+ISR+LRRQLFG R R SRSRSRSP HR H DR H G+GRR DDR++ Y
Sbjct: 171 MHLKKISRELRRQLFG--RYRRRHSRSRSRSPQAHRGHGDRPHGGRGYGRRDDDRNQRYH 228
Query: 179 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTD 238
+ RR RS SP H RGRSRSP GRR SPVRE SEERRAKI QWNRE+EQ A GN D
Sbjct: 229 DKGRRPRSRSPGH-RGRSRSPPGRRDRSPVRENSEERRAKIAQWNREKEQ---ADTGNND 284
Query: 239 GGNNDQGINNDGLMQNGNGYHSYKQQ 264
++ + +G NG Y+ + QQ
Sbjct: 285 VNHDVTDNHANGFQDNGEDYYDHPQQ 310
>gi|449443402|ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
gi|449510609|ref|XP_004163713.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 326
Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 187/230 (81%), Positives = 204/230 (88%), Gaps = 3/230 (1%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQGNP+DPR IQ+HFE+FYEDLF+ELNKYGEIESLN+CDNLADHMVG
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA AL++LSGRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHS--GHGRRYDDRDKYYE 178
MHLKRI R+LR +LF YRRRHS SRSRSRSPYRHRS+E+RS+ GH RRYD+RD Y+E
Sbjct: 171 MHLKRIGRELRHELFAMYRRRHSHSRSRSRSPYRHRSYEERSYGKHGHSRRYDERDAYHE 230
Query: 179 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQ 228
SRSRRHR+TSP HR G + SPVREGSEERRAKIEQWN+EREQ
Sbjct: 231 SRSRRHRTTSPGHRSRSRSPRGRKN-RSPVREGSEERRAKIEQWNKEREQ 279
>gi|294463000|gb|ADE77038.1| unknown [Picea sitchensis]
Length = 334
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 186/293 (63%), Positives = 205/293 (69%), Gaps = 45/293 (15%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPG+D QG+ LDP+KIQEHFEDFYEDLFEEL KYGEIESLN+CDNLADHMVG
Sbjct: 51 MYQRPDMITPGMDPQGHALDPQKIQEHFEDFYEDLFEELGKYGEIESLNVCDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEE AA AL++L+GRFYAGR IIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEHAAAALQALTGRFYAGRAIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRR--------------------RHSRSRSRSRS-------PY 153
MHLK+ISR+LRRQLFGRYRR RH R R PY
Sbjct: 171 MHLKKISRELRRQLFGRYRRYGHGYSRSRSRSLSPGLSVERHRGYDDRPRGGRGYDDRPY 230
Query: 154 RHRSHEDRSHSGHG-RRYDDRD--KYYESR-SRRHRSTSPSHRRGRSRSPGGRRYHSPVR 209
R ++DR H G G R ++RD Y++ R RR RS SP HR+GRSRS +R SPVR
Sbjct: 231 GGRGYDDRPHGGRGFGRKNERDYPGYHDDRHGRRPRSRSPGHRQGRSRSHSPKRNRSPVR 290
Query: 210 EGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINNDGLMQNGNGYHSYK 262
EGS ERRAKIEQWNREREQ + N MQNG G HSY+
Sbjct: 291 EGSAERRAKIEQWNREREQAAASSDANQS-------------MQNG-GAHSYQ 329
>gi|356543538|ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 315
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/244 (76%), Positives = 206/244 (84%), Gaps = 4/244 (1%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDA G+P+DPRKIQ+HFE+FYEDLF+EL+KYG+IESLN+CDNLADHMVG
Sbjct: 51 MYQRPDMITPGVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEE AA A+++L+GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEHAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRD--KYYE 178
MHLKRISR+LRRQLFG+ RHSRSRSRS RHRSHE+RSH H R+YDDRD
Sbjct: 171 MHLKRISRELRRQLFGKSHGRHSRSRSRSPY--RHRSHEERSHRSHSRKYDDRDHHHESR 228
Query: 179 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTD 238
SR R S R RSRSPGGRR+HSPVR+GSEERRA+IEQWNRERE QE YK N +
Sbjct: 229 SRRHRSTSPRHRRGRSRSRSPGGRRHHSPVRDGSEERRARIEQWNREREDQEPGYKVNAE 288
Query: 239 GGNN 242
NN
Sbjct: 289 EINN 292
>gi|297818960|ref|XP_002877363.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
gi|297323201|gb|EFH53622.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
Length = 277
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/232 (71%), Positives = 178/232 (76%), Gaps = 8/232 (3%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVD GN +DPRK+Q HFEDFYEDLFEELNKYGEIESLN+CDNL+DHMVG
Sbjct: 51 MYQRPDMITPGVDVNGNRIDPRKMQAHFEDFYEDLFEELNKYGEIESLNVCDNLSDHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQA AL +L GRFYAGRPIIVDFSPVTDFREATCRQYEE TC RGGYCNF
Sbjct: 111 NVYVQFREEEQAGNALHNLQGRFYAGRPIIVDFSPVTDFREATCRQYEEETCKRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 180
MHLK IS LRRQL+GRY+ RH SRSRSPYRHRSH+DRSH H R D +
Sbjct: 171 MHLKSISSGLRRQLYGRYKNRH--IHSRSRSPYRHRSHDDRSHERHSRSRRYDDDDDDGE 228
Query: 181 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEA 232
SR S R SPVR+GSEERRAKIEQWNRE+E+QE A
Sbjct: 229 SRSRSRRYRSRSPSGRRQK------SPVRDGSEERRAKIEQWNREKEEQENA 274
>gi|356572520|ref|XP_003554416.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/259 (65%), Positives = 194/259 (74%), Gaps = 7/259 (2%)
Query: 1 MYQRLDM----ITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLAD 56
MYQR DM IT Q LDP K+Q+HF+DFYEDLFEEL+KYG I+SLNICDNLAD
Sbjct: 51 MYQRPDMNMNIITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLAD 110
Query: 57 HMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 116
HMVGNVYVQFREE+ AA AL +L+GRFY+GRPIIVDFSPVTDFREATCRQYEEN CNRGG
Sbjct: 111 HMVGNVYVQFREEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGG 170
Query: 117 YCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKY 176
YCNFMHLK+ISRDLRR+LFGR RR + RS SRS+SP R+R+H + HSG G D D+
Sbjct: 171 YCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSKSPPRNRNHGEHLHSGRGSGRRDFDRS 230
Query: 177 YESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGN 236
+ RR RS SP +R RSRSP GR P+RE S ERRAKIEQWNRE+EQ E + K N
Sbjct: 231 HGHHGRRPRSRSPRYRGKRSRSPVGRDRSPPIRENSAERRAKIEQWNREKEQGETSNKNN 290
Query: 237 TDGGNNDQGINNDGLMQNG 255
T ++ Q + QNG
Sbjct: 291 TKSNDDYQ---EQSVAQNG 306
>gi|356505320|ref|XP_003521439.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/260 (64%), Positives = 193/260 (74%), Gaps = 7/260 (2%)
Query: 1 MYQRLDM----ITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLAD 56
MYQR DM IT Q LDP K+Q+HF+DFYEDLFEEL+KYG I+SLNICDNLAD
Sbjct: 51 MYQRPDMNMSIITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLAD 110
Query: 57 HMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 116
HMVGNVYVQFREE+ AA AL +L+GRFY+GRPIIVDFSPVTDFREATCRQYEEN CNRGG
Sbjct: 111 HMVGNVYVQFREEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGG 170
Query: 117 YCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKY 176
YCNFMHLK+ISRDLRR+LFGR RR + RS SRSRSP R+R+H + SHSG G D D+
Sbjct: 171 YCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSRSPPRNRNHGENSHSGRGSGRRDFDRS 230
Query: 177 YESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGN 236
+ RR RS SP +R RSRSP GR P+RE S ERRAKIEQWNRE+EQ + GN
Sbjct: 231 HGPHGRRPRSRSPRYRGKRSRSPVGRDRSPPIRESSAERRAKIEQWNREKEQGD---TGN 287
Query: 237 TDGGNNDQGINNDGLMQNGN 256
+ + + QNG+
Sbjct: 288 MNNSKSSDDYQEQSVAQNGS 307
>gi|116788026|gb|ABK24730.1| unknown [Picea sitchensis]
Length = 312
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 178/267 (66%), Positives = 196/267 (73%), Gaps = 15/267 (5%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DM+TPG+D QG+ +DPRKIQEHFEDFYEDLFEEL KYGE+ESLN+CDNLADHMVG
Sbjct: 51 MYQRPDMVTPGMDIQGHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA AL+SL GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEQAANALRSLQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 121 MHLKRISRD-LRRQLFGRYRRRHSRSRSRSRSPY----RHRSHEDRS-HSGHGRRYDDRD 174
MHLK+ISR+ RR R HSRSRSRS SP+ +HR H+DR H G G
Sbjct: 171 MHLKKISRELRRRLFGRYRRYSHSRSRSRSASPHKDHEKHRHHDDRPRHGGRGYDRRYDV 230
Query: 175 KYYES-RSRRHRSTSP-SHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEA 232
+ R RR RS SP HRRGRSRS RR SP+REGS ERRAKIEQWNRE+E Q +
Sbjct: 231 DDRDGHRGRRTRSRSPGGHRRGRSRSHSPRRNRSPIREGSAERRAKIEQWNREKEAQASS 290
Query: 233 YKGNTDGGNNDQGINNDGLMQNGNGYH 259
N + N G N GY+
Sbjct: 291 TIAN-------HPMQNGGAYSNPQGYY 310
>gi|224286856|gb|ACN41131.1| unknown [Picea sitchensis]
Length = 312
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 178/267 (66%), Positives = 196/267 (73%), Gaps = 15/267 (5%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DM+TPG+D QG+ +DPRKIQEHFEDFYEDLFEEL KYGE+ESLN+CDNLADHMVG
Sbjct: 51 MYQRPDMVTPGMDIQGHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA AL+SL GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEQAANALRSLQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 121 MHLKRISRD-LRRQLFGRYRRRHSRSRSRSRSPY----RHRSHEDRS-HSGHGRRYDDRD 174
MHLK+ISR+ RR R HSRSRSRS SP+ +HR H+DR H G G
Sbjct: 171 MHLKKISRELRRRLFGRYRRYSHSRSRSRSASPHKDYEKHRHHDDRPRHGGRGYDRRYDV 230
Query: 175 KYYES-RSRRHRSTSP-SHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEA 232
+ R RR RS SP HRRGRSRS RR SP+REGS ERRAKIEQWNRE+E Q +
Sbjct: 231 DDRDGHRGRRTRSRSPGGHRRGRSRSHSPRRNRSPIREGSAERRAKIEQWNREKEAQASS 290
Query: 233 YKGNTDGGNNDQGINNDGLMQNGNGYH 259
N + N G N GY+
Sbjct: 291 TIANYP-------MQNGGAYSNPQGYY 310
>gi|449451104|ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 188/274 (68%), Positives = 214/274 (78%), Gaps = 19/274 (6%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVD QG LDPRK+Q+HFEDFYEDLFEEL+KYG++ESLNICDNLADHMVG
Sbjct: 51 MYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA AL +L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHED-------RSHSGHGRRYDDR 173
MHLK+ISR+LRR+LFGR RRR SRSRSRS+SP++H +E+ G RR ++
Sbjct: 171 MHLKKISRELRRRLFGRSRRRRSRSRSRSQSPHKHHGYEERSHGGGGGRGRGPSRRDGEK 230
Query: 174 DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAY 233
D Y RSRR RS SP HR GRSRSPGGRR SPVRE S ERRAKIEQWNR+RE++
Sbjct: 231 DPRYHDRSRRPRSRSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREKE---- 286
Query: 234 KGNTDGGNNDQGINNDG----LMQNGNGYHSYKQ 263
D G+N Q + + G L+QN + + KQ
Sbjct: 287 ----DNGSNHQDVKDVGGSNDLVQNEDEFDPSKQ 316
>gi|449528561|ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 188/274 (68%), Positives = 213/274 (77%), Gaps = 19/274 (6%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVD QG LDPRK+Q+HFEDFYEDLFEEL+KYG++ESLNICDNLADHMVG
Sbjct: 51 MYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA AL +L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHED-------RSHSGHGRRYDDR 173
MHLK+ISR+LRR+LFGR RRR SRSRSRS+SP++H +E+ G RR ++
Sbjct: 171 MHLKKISRELRRRLFGRSRRRRSRSRSRSQSPHKHHGYEERSHGGGGGRGRGPSRRDGEK 230
Query: 174 DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAY 233
D Y RSRR RS SP HR GRSRSPGGRR SPVRE S ERRAKIEQWNR+RE+
Sbjct: 231 DPRYHDRSRRPRSRSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREKD---- 286
Query: 234 KGNTDGGNNDQGINNDG----LMQNGNGYHSYKQ 263
D G+N Q + + G L+QN + + KQ
Sbjct: 287 ----DNGSNHQDVKDVGGSNDLVQNEDEFDPSKQ 316
>gi|148908155|gb|ABR17193.1| unknown [Picea sitchensis]
Length = 344
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 181/296 (61%), Positives = 198/296 (66%), Gaps = 40/296 (13%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPG+D QG+ LDPRKIQEHFEDFYEDLFEEL KYG IESLN+CDNLADHMVG
Sbjct: 51 MYQRPDMITPGMDPQGHALDPRKIQEHFEDFYEDLFEELGKYGAIESLNVCDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEE AA AL++L+GRFYA R IIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEHAAAALQALTGRFYAERAIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRR-------RHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDR 173
MHLK+ISR+LRRQLFGRYRR SRS S S R+R ++DR G G YDDR
Sbjct: 171 MHLKKISRELRRQLFGRYRRYGHGYSRSRSRSLSPQLSVERNRGYDDRPRGGRG--YDDR 228
Query: 174 ------------------------------DKYYESR-SRRHRSTSPSHRRGRSRSPGGR 202
Y++ R RR RS SP HRRGRSRS +
Sbjct: 229 PHGGRGYDGGRGRGYDGRGRGFGRRNERDYPSYHDDRHGRRPRSRSPGHRRGRSRSRSPK 288
Query: 203 RYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINNDGLMQNGNGY 258
R VREGS ERRAKIEQWNREREQ + N N + L Q G G+
Sbjct: 289 RNRGSVREGSAERRAKIEQWNREREQAATSSTANESMQNGEVQNGGAHLYQPGYGF 344
>gi|242058279|ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
gi|241930260|gb|EES03405.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
Length = 288
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/238 (63%), Positives = 178/238 (74%), Gaps = 9/238 (3%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPRK+QEHFEDFYED++EEL+K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKMQEHFEDFYEDIYEELSKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA A +L GRFY+GRPI+VDFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 180
MH+K+I RDLR+++FG Y+R + R RSRS SP+ R DR R +
Sbjct: 171 MHVKKIGRDLRKKMFGHYKRPY-RGRSRSPSPHHRRERRDRDDYRGAGGGGGRGRDDYRG 229
Query: 181 SR--------RHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
RH RR SP RR SPVRE SEERRAKIEQWNRER++++
Sbjct: 230 GGGGRRGGGSRHERYDDGGRRRHGGSPPPRRARSPVRESSEERRAKIEQWNRERDEKQ 287
>gi|226506342|ref|NP_001150605.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195640524|gb|ACG39730.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|223947729|gb|ACN27948.1| unknown [Zea mays]
gi|407232662|gb|AFT82673.1| C3H4 C3H transcription factor, partial [Zea mays subsp. mays]
gi|414591925|tpg|DAA42496.1| TPA: Splicing factor U2af subunit isoform 1 [Zea mays]
gi|414591926|tpg|DAA42497.1| TPA: Splicing factor U2af subunit isoform 2 [Zea mays]
gi|414591927|tpg|DAA42498.1| TPA: Splicing factor U2af subunit isoform 3 [Zea mays]
gi|414591928|tpg|DAA42499.1| TPA: Splicing factor U2af subunit isoform 4 [Zea mays]
Length = 299
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/263 (61%), Positives = 183/263 (69%), Gaps = 47/263 (17%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYRHRSHEDRSHS-------------- 164
MH+K+I RDLRR+L+GR RR H RSRSRS P R R H DR
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHGRSRSRSPPPQR-RGHRDRDDYRGGGGGGRGRGSRY 229
Query: 165 -----GHGR-----RYDD-------RDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP 207
G GR RYDD D+Y + RRH S RR SP
Sbjct: 230 DRYDDGAGRGGRHDRYDDGAGRGGRHDRYDDGGRRRHGSPP-------------RRARSP 276
Query: 208 VREGSEERRAKIEQWNREREQQE 230
VRE SEERRAKIEQWNRERE ++
Sbjct: 277 VRESSEERRAKIEQWNREREGKQ 299
>gi|413948479|gb|AFW81128.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413948480|gb|AFW81129.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413948481|gb|AFW81130.1| splicing factor U2af subunit isoform 3 [Zea mays]
gi|413948482|gb|AFW81131.1| splicing factor U2af subunit isoform 4 [Zea mays]
gi|413948483|gb|AFW81132.1| splicing factor U2af subunit isoform 5 [Zea mays]
Length = 304
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/266 (59%), Positives = 183/266 (68%), Gaps = 48/266 (18%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP--------YRHR---------------- 156
MH+K+I RDLRR+L+GR R +RSRS P Y HR
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHARSRSPPPQRRGYREDYHHRDRDEYRGGGGGGGRGR 230
Query: 157 -SHEDRSHSGHGR-----RYDD------RDKYYESRSRRHRSTSPSHRRGRSRSPGGRRY 204
S DR G GR RYDD R + Y+ RR + P RRGR
Sbjct: 231 GSRHDRYDDGAGRGGRHDRYDDGAGRGGRYERYDDGGRRRHGSPP--RRGR--------- 279
Query: 205 HSPVREGSEERRAKIEQWNREREQQE 230
SPVRE SEERRAKIEQWNRERE ++
Sbjct: 280 -SPVRESSEERRAKIEQWNRERESKQ 304
>gi|226492577|ref|NP_001148499.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195619816|gb|ACG31738.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 305
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/267 (59%), Positives = 183/267 (68%), Gaps = 49/267 (18%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP--------YRHR---------------- 156
MH+K+I RDLRR+L+GR R +RSRS P Y HR
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHARSRSPPPQRRGYREDYHHRDRDEYRGGGGGGGGRG 230
Query: 157 --SHEDRSHSGHGR-----RYDD------RDKYYESRSRRHRSTSPSHRRGRSRSPGGRR 203
S DR G GR RYDD R + Y+ RR + P RRGR
Sbjct: 231 RGSRHDRYDDGAGRGGRHDRYDDGAGRGGRYERYDDGGRRRHGSPP--RRGR-------- 280
Query: 204 YHSPVREGSEERRAKIEQWNREREQQE 230
SPVRE SEERRAKIEQWNRERE ++
Sbjct: 281 --SPVRESSEERRAKIEQWNRERESKQ 305
>gi|255575357|ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 313
Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 175/263 (66%), Positives = 193/263 (73%), Gaps = 11/263 (4%)
Query: 1 MYQRLDMITPGVD--AQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM 58
MYQR DM+TPGVD AQ LDPRKIQ+HFEDFY+DLFEEL+KYG+IESLNICDNLADHM
Sbjct: 51 MYQRPDMLTPGVDPQAQSQSLDPRKIQDHFEDFYQDLFEELSKYGDIESLNICDNLADHM 110
Query: 59 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 118
VGNVYVQFREE+ AA AL++L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYC
Sbjct: 111 VGNVYVQFREEDHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYC 170
Query: 119 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP---YRHRSHEDRSHSGHGRRYDDRDK 175
NFMHLK+ISR+LRR+LFGR RRR SRSRS S S Y R H R G GRR DDR
Sbjct: 171 NFMHLKKISRELRRRLFGRNRRRRSRSRSHSPSRHRGYDERPHGGR---GFGRRDDDRAH 227
Query: 176 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKG 235
++E R + G R PVRE S ERRAKIEQWNREREQ E G
Sbjct: 228 HHERGRRPRSRSPGRRGGRSRSPAGRRNRSPPVRESSAERRAKIEQWNREREQTE---SG 284
Query: 236 NTDGGNNDQGINNDGLMQNGNGY 258
N DG N D N++G +NG Y
Sbjct: 285 NRDGQNLDNDRNSNGDAKNGGHY 307
>gi|195625888|gb|ACG34774.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/270 (58%), Positives = 182/270 (67%), Gaps = 53/270 (19%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYRHRSHEDRSHS-------------- 164
MH+K+I RDLRR+L+GR RR H RSRSRS P R + +
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGG 230
Query: 165 ------------GHGR-----RYDD-------RDKYYESRSRRHRSTSPSHRRGRSRSPG 200
G GR RYDD D+Y + RRH S S
Sbjct: 231 RGRGSRYDRYDDGAGRGGRHARYDDGAGRGGRHDRYDDGGRRRHGSPS------------ 278
Query: 201 GRRYHSPVREGSEERRAKIEQWNREREQQE 230
RR SPVRE SEERRAKIEQWNRERE ++
Sbjct: 279 -RRARSPVRESSEERRAKIEQWNREREGKQ 307
>gi|224086130|ref|XP_002307825.1| predicted protein [Populus trichocarpa]
gi|222857274|gb|EEE94821.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/240 (63%), Positives = 172/240 (71%), Gaps = 30/240 (12%)
Query: 2 YQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGN 61
Y R DMITPGVDAQG PLDP KIQEHFEDFYED+FEEL+K+GEIE+LN+CDNLADHM+GN
Sbjct: 52 YHRPDMITPGVDAQGQPLDPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGN 111
Query: 62 VYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFM 121
VYVQF+EE+QAA AL+SL GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFM
Sbjct: 112 VYVQFKEEDQAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFM 171
Query: 122 HLKRISRDLRRQLFGRYR-----------RRHSRSRSRSRSPYRHRSHEDRSHSGHGRRY 170
H+K I +DLRR+LFGRYR R R DR + G+GRR
Sbjct: 172 HVKLIGKDLRRKLFGRYRGYRVSRSRSRSVSPRRRDRDYDRRERDYRDRDRDYRGNGRR- 230
Query: 171 DDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
+DRD GR R RR SPVREGSEERRA+IEQWNRERE+++
Sbjct: 231 NDRDG------------------GRKRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ 272
>gi|242088837|ref|XP_002440251.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
gi|241945536|gb|EES18681.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
Length = 307
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/259 (60%), Positives = 179/259 (69%), Gaps = 31/259 (11%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYR------------------HRSHED 160
MH+K+I RDLRR+L+GR RR H RSRSRS P R
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGG 230
Query: 161 RSHSGHGRRYDD-------RDKYYESRSR--RHRSTSPSHRRGRSRSPGGRRYHSPVREG 211
R RYDD D+Y + R RH RR P RR SPVRE
Sbjct: 231 RGRGSRHDRYDDGAGRGGRHDRYDDGAGRGGRHERYDDGGRRRHGSPP--RRARSPVRES 288
Query: 212 SEERRAKIEQWNREREQQE 230
SEERRAKIEQWNRERE ++
Sbjct: 289 SEERRAKIEQWNREREAKQ 307
>gi|351629504|gb|AEQ54731.1| SiU2af35 [Setaria italica]
Length = 294
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/244 (61%), Positives = 174/244 (71%), Gaps = 14/244 (5%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 178
MH+K+I +DLRR+L+GR R+ H RSRSRS P R + + Y
Sbjct: 171 MHVKQIGKDLRRKLYGRSASRKYHGRSRSRSPPPQRRGHRDRDDYHRDRDDYRGGGGGGR 230
Query: 179 SRSRRHRSTSPSHR------------RGRSRSPGGRRYHSPVREGSEERRAKIEQWNRER 226
R RH R R SP RR SPVRE SEERRAKIEQWNRER
Sbjct: 231 GRGSRHDRYDDGGGRGGRHDRYDDGGRRRHGSPPPRRGRSPVRESSEERRAKIEQWNRER 290
Query: 227 EQQE 230
E ++
Sbjct: 291 EAKQ 294
>gi|212275838|ref|NP_001130754.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|194690026|gb|ACF79097.1| unknown [Zea mays]
gi|194703336|gb|ACF85752.1| unknown [Zea mays]
gi|407232734|gb|AFT82709.1| C3H53 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413946518|gb|AFW79167.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413946519|gb|AFW79168.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413946520|gb|AFW79169.1| splicing factor U2af subunit isoform 3 [Zea mays]
Length = 307
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/270 (57%), Positives = 178/270 (65%), Gaps = 53/270 (19%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYR------------------HRSHED 160
MH+K+I RDLRR+L+GR RR H RSRSRS P R
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGG 230
Query: 161 RSHSGHGRRYDDR--------------------DKYYESRSRRHRSTSPSHRRGRSRSPG 200
R RYDD D+Y + RRH S S
Sbjct: 231 RGRGSRYDRYDDGAGRGGRHGRYDDGAGRGGRHDRYDDGGRRRHGSPS------------ 278
Query: 201 GRRYHSPVREGSEERRAKIEQWNREREQQE 230
RR SPVRE SEERRAKIEQWNRERE ++
Sbjct: 279 -RRARSPVRESSEERRAKIEQWNREREGKQ 307
>gi|195615822|gb|ACG29741.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/270 (57%), Positives = 179/270 (66%), Gaps = 53/270 (19%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYRHRSH-------------------- 158
MH+K+I RDLRR+L+GR RR H RSRSRS P R
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHGRSRSRSPPPQRRDHRDRDDYHHRDRDDYRGGGGGG 230
Query: 159 -----------EDRSHSGHGRRYDD-------RDKYYESRSRRHRSTSPSHRRGRSRSPG 200
+ G RYDD D+Y + RRH S S
Sbjct: 231 RGRGSRYDRYDDGAGRGGRHGRYDDGAGRGGRHDRYDDGGRRRHGSPS------------ 278
Query: 201 GRRYHSPVREGSEERRAKIEQWNREREQQE 230
RR SPVRE SEERRAKIEQWNRERE ++
Sbjct: 279 -RRARSPVRESSEERRAKIEQWNREREGKQ 307
>gi|388521171|gb|AFK48647.1| unknown [Medicago truncatula]
Length = 327
Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/236 (67%), Positives = 184/236 (77%), Gaps = 13/236 (5%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
LDP K+QEHF+DFYEDLFEEL+KYG+I+SLNICDNLADHMVGNVYVQ++EE+ AA AL +
Sbjct: 83 LDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMN 142
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
L+GRFY+GRPIIV FSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISRDLR++LFGR
Sbjct: 143 LTGRFYSGRPIIVGFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRS 202
Query: 139 RRR-HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSR 197
RR + RS SRSRSP R+R++E RS+SG G D D+ + S RR RS SP HR RSR
Sbjct: 203 SRRWNDRSGSRSRSPPRNRNYEGRSYSGRGSGRRDLDRSHGSHGRRPRSRSPRHRGRRSR 262
Query: 198 SPGGR-RYHSPV---REGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINND 249
SP GR R +PV RE S ERRA+IEQWNRE+E D GN D NND
Sbjct: 263 SPVGRDRSPNPVRGERESSVERRARIEQWNREKEV--------GDSGNKDNKSNND 310
>gi|297727107|ref|NP_001175917.1| Os09g0491756 [Oryza sativa Japonica Group]
gi|75338870|sp|Q9ZQW8.1|U2AFA_ORYSJ RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=OsC3H60
gi|3850818|emb|CAA77133.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
gi|125564203|gb|EAZ09583.1| hypothetical protein OsI_31864 [Oryza sativa Indica Group]
gi|125606167|gb|EAZ45203.1| hypothetical protein OsJ_29848 [Oryza sativa Japonica Group]
gi|215692945|dbj|BAG88365.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704518|dbj|BAG94151.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679017|dbj|BAH94645.1| Os09g0491756 [Oryza sativa Japonica Group]
Length = 290
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/239 (64%), Positives = 178/239 (74%), Gaps = 9/239 (3%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MY R DMITPG+DAQGNP+DP KIQ FEDFYED+FEEL+KYGEIESL++CDN ADHM+G
Sbjct: 51 MYLRPDMITPGIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAARAL++L+GR+Y+GRPIIV+FSPV+DFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFG---RYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGR------RYD 171
MH+K I RDLR++LFG R RR HS RSRS SPY +R DR S R R
Sbjct: 171 MHVKEIGRDLRKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGG 230
Query: 172 DRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
D Y R S+ SR R SPVR+GSEERRA+IEQWNRERE +
Sbjct: 231 SHDYYRGGSRRSSERHRSSYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNREREAAQ 289
>gi|3850819|emb|CAA77134.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 274
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 148/233 (63%), Positives = 173/233 (74%), Gaps = 13/233 (5%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MY R DMITPG+DAQGNP+DP KIQ FEDFYED+FEEL+KYGEIESL++CDN ADHM+G
Sbjct: 51 MYLRPDMITPGIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAARAL++L+GR+Y+GRPIIV+FSPV+DFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFG---RYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYY 177
MH+K I RDLR++LFG R RR HS RSRS SPY H R + Y
Sbjct: 171 MHVKEIGRDLRKRLFGHLHRSRRSHSHGRSRSPSPY----HYRRDYDRRSSSRSRDHDDY 226
Query: 178 ESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
+R S + RG SR R S +GSEERRA+IEQWNRERE +
Sbjct: 227 ------YRGGSHDYYRGGSRRSSERHRSSYDSDGSEERRAQIEQWNREREAAQ 273
>gi|255539352|ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 272
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 153/240 (63%), Positives = 172/240 (71%), Gaps = 30/240 (12%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPRKIQEHFEDFYED+FEEL K+GEIESLN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRS-----------HSGHGRR 169
MH+K I RDLRR+LFGRYR + E + + G+GRR
Sbjct: 171 MHVKLIGRDLRRKLFGRYRGYRASRSRSRSVSPSRHRREKSNDRRERDYRDRDYRGNGRR 230
Query: 170 YDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 229
DR H R R SP RR SPVREGSEERRA+IEQWNRERE++
Sbjct: 231 SGDR-----------------HDRRRHGSP--RRSRSPVREGSEERRARIEQWNREREEK 271
>gi|357135864|ref|XP_003569528.1| PREDICTED: splicing factor U2af small subunit B-like isoform 1
[Brachypodium distachyon]
gi|357135866|ref|XP_003569529.1| PREDICTED: splicing factor U2af small subunit B-like isoform 2
[Brachypodium distachyon]
gi|357135868|ref|XP_003569530.1| PREDICTED: splicing factor U2af small subunit B-like isoform 3
[Brachypodium distachyon]
Length = 281
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/232 (65%), Positives = 174/232 (75%), Gaps = 4/232 (1%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPRK+QEHFEDFYED+FEEL+K+GEIE+LN+CDNL+DHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA A +L GRFY+GR IIVDFSPVTDFREATCRQYEENTC RGG+CNF
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 180
MH+K+I +DLR++LFGR RR R RSRS SP+ R DR Y
Sbjct: 171 MHVKQIGKDLRKKLFGR-YRRSHRGRSRSPSPHHRRERRDRDDYRGRDDYRRGGGGGGGG 229
Query: 181 SRRHRSTSPSHRRGRSRSPGG---RRYHSPVREGSEERRAKIEQWNREREQQ 229
R S + H G R GG RR SPVRE SEERRAKIEQWNRE+E +
Sbjct: 230 RRGGSSRNERHDDGGRRRYGGSPPRRARSPVRENSEERRAKIEQWNREKEAK 281
>gi|326498815|dbj|BAK02393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 281
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 153/232 (65%), Positives = 174/232 (75%), Gaps = 4/232 (1%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPRK+QEHFEDFYED+FEEL+K+GEIE+LN+CDNL+DHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA A +L GRFY+GR IIVDFSPVTDFREATCRQYEENTC RGG+CNF
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 180
MH+K+I +DLR++LFGRYRR R RSRS SP+ R DR +
Sbjct: 171 MHVKQIGKDLRKKLFGRYRRS-QRGRSRSPSPHHRRERRDRDDYRGRDDFRRGGGGGGGG 229
Query: 181 SRRHRSTSPSHRRGRSRSPGG---RRYHSPVREGSEERRAKIEQWNREREQQ 229
R S H G R GG RR SPVRE SEERRAKIEQWNRERE +
Sbjct: 230 RRGGSSRHERHDDGGRRRYGGSPPRRARSPVRENSEERRAKIEQWNRERETK 281
>gi|226502062|ref|NP_001140674.1| uncharacterized protein LOC100272749 [Zea mays]
gi|194700362|gb|ACF84265.1| unknown [Zea mays]
gi|194700522|gb|ACF84345.1| unknown [Zea mays]
gi|223975941|gb|ACN32158.1| unknown [Zea mays]
gi|407232750|gb|AFT82717.1| C3H40 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414886043|tpg|DAA62057.1| TPA: splicing factor U2af subunit isoform 1 [Zea mays]
gi|414886044|tpg|DAA62058.1| TPA: splicing factor U2af subunit isoform 2 [Zea mays]
gi|414886045|tpg|DAA62059.1| TPA: splicing factor U2af subunit isoform 3 [Zea mays]
gi|414886046|tpg|DAA62060.1| TPA: splicing factor U2af subunit isoform 4 [Zea mays]
gi|414886047|tpg|DAA62061.1| TPA: splicing factor U2af subunit isoform 5 [Zea mays]
gi|414886048|tpg|DAA62062.1| TPA: splicing factor U2af subunit isoform 6 [Zea mays]
gi|414886049|tpg|DAA62063.1| TPA: splicing factor U2af subunit isoform 7 [Zea mays]
gi|414886050|tpg|DAA62064.1| TPA: splicing factor U2af subunit isoform 8 [Zea mays]
Length = 287
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/237 (63%), Positives = 174/237 (73%), Gaps = 8/237 (3%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQGNP+DP +IQE FEDFYED+F EL+K+GEIESL++CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV+FREEEQAARAL++L GR+Y+GRPII +FSPVTDFREATCRQ+EE++CNRGGYCNF
Sbjct: 111 NVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFG---RYRRRHSRSRSRSRSPY----RHRSHEDRSHSGHGRRYDDR 173
MH+K++ RDLRR+LFG R R HSR SRS SPY DR + R
Sbjct: 171 MHVKQVGRDLRRKLFGHLHRSLRSHSRG-SRSPSPYRRRGSSSRSRDRDDYHDYYYHYYR 229
Query: 174 DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
RS + S R R R SPVREGSEERRAKIEQWNRERE +
Sbjct: 230 SGSGSRRSSERHRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQ 286
>gi|294461365|gb|ADE76244.1| unknown [Picea sitchensis]
Length = 290
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/241 (63%), Positives = 177/241 (73%), Gaps = 24/241 (9%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPG+D QG +DPRKIQEHFEDF+ED+FEEL+K+GEIE+LNICDNLADHMVG
Sbjct: 51 MYQRPDMITPGLDPQGQAMDPRKIQEHFEDFFEDIFEELSKFGEIENLNICDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQAA ALK++ GRFY+GRPIIVDFSPVTDFREATCRQ+EEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAALKAMQGRFYSGRPIIVDFSPVTDFREATCRQFEENNCNRGGYCNF 170
Query: 121 MHLKRISRDL---------RRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYD 171
MH+K+I++DL R + R S S P R R ++DR G+GRRY+
Sbjct: 171 MHVKKINKDLRRKLFGRFRRFRGGRSRSRSRSLSPLPPPPPSRSRRYDDR---GNGRRYE 227
Query: 172 DRDKYYESRSRRHRSTSPSHRRGRSR---SPGGRRYHSPVREGSEERRAKIEQWNREREQ 228
DRD +RS+ RRG + S RR SP R+GS ERRA+IEQWNRERE
Sbjct: 228 DRD---------YRSSDRDERRGSVKRTRSRSPRRNRSPARDGSAERRARIEQWNRERES 278
Query: 229 Q 229
Q
Sbjct: 279 Q 279
>gi|359482307|ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
vinifera]
Length = 343
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/136 (90%), Positives = 130/136 (95%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DM+TPGVD QG PLDPRKIQEHFEDFYEDLFEEL+KYGEIESLNICDNLADHMVG
Sbjct: 51 MYQRPDMVTPGVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEE AA AL++L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFG 136
MHLK+ISR+LRRQLFG
Sbjct: 171 MHLKKISRELRRQLFG 186
>gi|224061819|ref|XP_002300614.1| predicted protein [Populus trichocarpa]
gi|222842340|gb|EEE79887.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/245 (61%), Positives = 172/245 (70%), Gaps = 37/245 (15%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG PLDP KIQEHFE+FYED+FEELNK+GEIESLN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV F+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNF
Sbjct: 111 NVYVLFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYR---------------RRHSRSRSRSRSPYRHRSHEDRSHSG 165
MH+K I RDLRR+LFGRYR +R R R DR + G
Sbjct: 171 MHVKLIGRDLRRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRDRDRDRDYRG 230
Query: 166 HGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRE 225
+GRR D D R G +R+ S VREGSEERRA+IEQWNRE
Sbjct: 231 NGRRNDKYD----------------------REGGRKRHGSTVREGSEERRARIEQWNRE 268
Query: 226 REQQE 230
RE+++
Sbjct: 269 REEKQ 273
>gi|68036691|gb|AAY84879.1| U2AF small subunit [Triticum aestivum]
Length = 314
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/241 (60%), Positives = 173/241 (71%), Gaps = 17/241 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQGNP+DP KIQ FEDFYED+F+EL+K+GE+E+L++CDNLADH++G
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA+AL++L GRFY+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAKALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRS------------HSGHGR 168
MH+K I RDLR++L+G R SRSP +R H + G
Sbjct: 171 MHVKEIGRDLRKRLYGHLHRSGRSHSRSSRSPSPYRHHARDRDRSSRSRDRGDYYGGSLD 230
Query: 169 RYDDRDKYYESR--SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRER 226
R D D Y+ SR S R+R+ G R SPVREGSEERRAKIEQWNRER
Sbjct: 231 RGDYGDYYHHSRRSSERNRNYDSD---GSRCRRHRSRTRSPVREGSEERRAKIEQWNRER 287
Query: 227 E 227
E
Sbjct: 288 E 288
>gi|15239067|ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|42573547|ref|NP_974870.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=AtC3H60
gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor, small subunit [Arabidopsis thaliana]
gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|332007485|gb|AED94868.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|332007486|gb|AED94869.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
Length = 283
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/246 (63%), Positives = 180/246 (73%), Gaps = 33/246 (13%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVD QG PLDP KIQ+HFEDFYED+FEELNK+GE+ESLN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV F+EE+ AA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSR-----------------SRSRSRSPYRHRSHEDRSH 163
MH+K+ISR+LRR+LFGRYRR + R SR R R R DR
Sbjct: 171 MHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVR-----DRDR 225
Query: 164 SGHGRRYDDR-DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQW 222
G+G+R DR +++ R R SP RSRSP VREGSEERRA+IEQW
Sbjct: 226 HGNGKRSSDRSERHDRDGGGRRRHGSPK----RSRSPRN------VREGSEERRARIEQW 275
Query: 223 NREREQ 228
NRER++
Sbjct: 276 NRERDE 281
>gi|326528149|dbj|BAJ89126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 314
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/241 (60%), Positives = 177/241 (73%), Gaps = 17/241 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQGNP++P KIQ FEDFYED+F+EL+K+GE+E+L++CDNLADH++G
Sbjct: 51 MYQRPDMITPGVDAQGNPINPVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA+AL++L GRFY+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAKALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHE---DRS---------HSGHGR 168
MH+K+I RDLR++L+G SRSP +R H DRS + G
Sbjct: 171 MHVKQIGRDLRKRLYGHLHSSRRSHSRSSRSPSPYRHHARDRDRSSRSKDRGDYYGGSLD 230
Query: 169 RYDDRDKYYESR--SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRER 226
R D D Y+ SR S R+R+ G R R SPVREGSEERRAKIEQWNRER
Sbjct: 231 RGDYGDYYHHSRRSSERNRNYDSD---GSRRRRHRSRTRSPVREGSEERRAKIEQWNRER 287
Query: 227 E 227
+
Sbjct: 288 D 288
>gi|356574563|ref|XP_003555415.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 268
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 161/228 (70%), Gaps = 12/228 (5%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVD QG LDPRKIQ+HFEDFYED+F EL K+GEIESLN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDPQGQTLDPRKIQQHFEDFYEDIFTELAKFGEIESLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA+AL +L GRFY RPII DFSPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAKALHALRGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 180
MH+K I RDLRR+LFGR R S HR RS S R++
Sbjct: 171 MHVKLIGRDLRRRLFGR--------NHRGGSGTYHRVSRSRSRSRSASPRYRRERRESDS 222
Query: 181 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQ 228
RS GR R G P REGSEERRA+IEQWNRERE+
Sbjct: 223 RGGRRSRERDGSGGRRRQHGS----PPAREGSEERRARIEQWNREREE 266
>gi|297791697|ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
gi|297309568|gb|EFH39992.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/245 (63%), Positives = 179/245 (73%), Gaps = 33/245 (13%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVD QG PLDP KIQ+HFEDFYED+FEELNK+GE+ESLN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV F+EE+ AA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSR-----------------SRSRSRSPYRHRSHEDRSH 163
MH+K+ISR+LRR+LFGRYRR + R SR R R R DR
Sbjct: 171 MHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDLR-----DRDR 225
Query: 164 SGHGRRYDDR-DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQW 222
G+G+R DR +++ R R SP RSRSP VREGSEERRA+IEQW
Sbjct: 226 HGNGKRSSDRSERHDRDGGGRRRHGSPK----RSRSPRN------VREGSEERRARIEQW 275
Query: 223 NRERE 227
NRER+
Sbjct: 276 NRERD 280
>gi|449455651|ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
gi|449485076|ref|XP_004157064.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
Length = 276
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 148/230 (64%), Positives = 168/230 (73%), Gaps = 4/230 (1%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPRKIQEHFEDFYED++EEL K+GEIESLN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 180
MH+K I +DLRR+LFGRYR + + H R Y DRD R
Sbjct: 171 MHVKMIGKDLRRKLFGRYRGYRASRSRSRSL----SPRNRKEHDRRERDYRDRDYRGNGR 226
Query: 181 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
S+ RR S R VREGSEERRA+IEQWNRERE+++
Sbjct: 227 SKERHDRDGGRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREEKQ 276
>gi|312282783|dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/254 (61%), Positives = 178/254 (70%), Gaps = 24/254 (9%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG PLDPRKIQEHFEDF+EDLFEEL K+GEIESLNICDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSR---SPYRHRSHEDRSHSGHGRRYDDRDKYY 177
MH+K +SR+LRR+LFGRYRR + R SP R H+ R S + DRD+ +
Sbjct: 171 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSISPRHKREHDRRDPSHREFSHRDRDREF 230
Query: 178 ESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGS---------------------EERR 216
RS+ S R R S G R REGS EERR
Sbjct: 231 YRHGSGKRSSERSERGDREGSRGDREGSRGDREGSRRRHESSPKRGGSPGGGREGSEERR 290
Query: 217 AKIEQWNREREQQE 230
A+IEQWNRERE++E
Sbjct: 291 ARIEQWNREREEKE 304
>gi|15723293|gb|AAL06332.1|AF409140_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 283
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 154/246 (62%), Positives = 178/246 (72%), Gaps = 33/246 (13%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVD QG PLDP KIQ+HFEDFYED+FEELNK+GE+ESLN+C NLADHM+G
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCVNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV F+EE+ AA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN+CNRGG CNF
Sbjct: 111 NVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGCCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSR-----------------SRSRSRSPYRHRSHEDRSH 163
MH+K+ISR+LRR+LFGRYRR + R SR R R R DR
Sbjct: 171 MHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVR-----DRDR 225
Query: 164 SGHGRRYDDR-DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQW 222
G+G+R DR ++Y R R SP RSRSP VREGSEERRA+IEQW
Sbjct: 226 HGNGKRSSDRSERYDRDGGGRRRHGSPK----RSRSPRN------VREGSEERRARIEQW 275
Query: 223 NREREQ 228
NRER++
Sbjct: 276 NRERDE 281
>gi|225457677|ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
vinifera]
gi|359491881|ref|XP_003634337.1| PREDICTED: splicing factor U2af small subunit B isoform 2 [Vitis
vinifera]
Length = 272
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/237 (64%), Positives = 174/237 (73%), Gaps = 22/237 (9%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPRKIQEHFEDFYED+FEEL K+GEIESLN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQF+EEEQAA AL++L GRFY+GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNF
Sbjct: 111 NVYVQFKEEEQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLF-------GRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDR 173
MH+K I RDLRR+LF R S S R R RS + + G+GRR D+
Sbjct: 171 MHVKLIGRDLRRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSGDRGDYRGNGRRSGDK 230
Query: 174 DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
+ S R R SP RR SPVREGSEERRA+IE WNRERE+++
Sbjct: 231 ---HGSDGGRRRHGSP------------RRSRSPVREGSEERRARIELWNREREERQ 272
>gi|388506242|gb|AFK41187.1| unknown [Lotus japonicus]
Length = 318
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/241 (63%), Positives = 182/241 (75%), Gaps = 15/241 (6%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
K+Q+HF+DFYEDLF+EL+KYG+I+SLNICDNLADHMVGNVYVQ++EE+ AA AL +L+GR
Sbjct: 79 KLQDHFDDFYEDLFQELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALTNLTGR 138
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRH 142
FY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISRDLRR+LFGR +R +
Sbjct: 139 FYSGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRRLFGRNKRWN 198
Query: 143 ----SRSRSRSRSPYRHRSHEDRSH--SGHGRRYDDRDKYYESRSRRHRSTSPSHRRG-R 195
SRSRSRSRSP R+R++E+R G D D+ + R+ RS SP RG R
Sbjct: 199 DRRGSRSRSRSRSPPRNRNYEERPQFGGRGGSGRRDFDRSHGRHGRKPRSRSPPRFRGKR 258
Query: 196 SRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINNDGLMQNG 255
SRSP GR SPVRE S ERRAKIEQWN E+EQ + K NT + D L QNG
Sbjct: 259 SRSPAGRD-RSPVRESSAERRAKIEQWNGEKEQDDTGPKNNTSD-------DYDELAQNG 310
Query: 256 N 256
+
Sbjct: 311 S 311
>gi|357154143|ref|XP_003576685.1| PREDICTED: splicing factor U2af small subunit A-like [Brachypodium
distachyon]
Length = 295
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/244 (57%), Positives = 169/244 (69%), Gaps = 14/244 (5%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQGNP+DP KIQ FEDFYED+F+EL+K+G +ESL++CDNLADH++G
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPVKIQGDFEDFYEDIFDELSKHGVVESLHVCDNLADHLIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAARAL++L GRFY+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAARALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRY----------RRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRY 170
MH+K I RDLR++L+G + R RS ++R +G
Sbjct: 171 MHVKEIGRDLRKRLYGHLHRSRRSHSRSPSPYHRHPRDRDRRSSSRSRDNRGGDYYGGSL 230
Query: 171 D--DRDKYYESRSRRHRSTSPSHRR--GRSRSPGGRRYHSPVREGSEERRAKIEQWNRER 226
D D YY RR ++ G R R SPVREGSEERRAKIEQWNRER
Sbjct: 231 DRGDYGDYYHHSRRRSSERHRNYDSDDGSRRRRHRSRTRSPVREGSEERRAKIEQWNRER 290
Query: 227 EQQE 230
E +
Sbjct: 291 EAAQ 294
>gi|168049329|ref|XP_001777116.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671559|gb|EDQ58109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/248 (62%), Positives = 171/248 (68%), Gaps = 29/248 (11%)
Query: 1 MYQRLDM-ITPGVDAQGNP--LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADH 57
MYQ D GVD GN DPRK+QEHFEDFYED+FEEL+KYGEIE+LN+CDNLADH
Sbjct: 51 MYQSPDAGFHGGVDQHGNIQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADH 110
Query: 58 MVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY 117
M+GNVYV+FREEE AA AL +LSGRFYAGRPII+DFSPVTDFREATCRQYEENTCNRGGY
Sbjct: 111 MIGNVYVKFREEEHAAAALNALSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGY 170
Query: 118 CNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRD--- 174
CNFMHLK+ISR+LRR+LFG YR RSRSRS SPY + RRY DRD
Sbjct: 171 CNFMHLKKISRELRRKLFGNYR---RRSRSRSHSPY---GRGEARGPPSPRRYGDRDFYD 224
Query: 175 ----------KYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNR 224
S RR + R RSPG REGS ERRAKIEQWNR
Sbjct: 225 SRRGGGRGGGGRGRSYGRRRDRSRSRTPPRRGRSPG-------AREGSAERRAKIEQWNR 277
Query: 225 EREQQEEA 232
ERE ++ A
Sbjct: 278 EREVRQAA 285
>gi|224034457|gb|ACN36304.1| unknown [Zea mays]
Length = 276
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/227 (63%), Positives = 166/227 (73%), Gaps = 8/227 (3%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQGNP+DP +IQE FEDFYED+F EL+K+GEIESL++CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV+FREEEQAARAL++L GR+Y+GRPII +FSPVTDFREATCRQ+EE++CNRGGYCNF
Sbjct: 111 NVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFG---RYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYY 177
MH+K++ RDLRR+LFG R R HSR SRS SPYR R RS Y
Sbjct: 171 MHVKQVGRDLRRKLFGHLHRSLRSHSRG-SRSPSPYRRRGSSSRSRDRDDYHDYYYHYYR 229
Query: 178 ESRSRRHRSTSP----SHRRGRSRSPGGRRYHSPVREGSEERRAKIE 220
R S S R R R SPVREGSEERRAKIE
Sbjct: 230 SGSGSRRSSERHRSHDSDGSLRRRGRSRSRSRSPVREGSEERRAKIE 276
>gi|297845720|ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
gi|297336583|gb|EFH67000.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/244 (62%), Positives = 171/244 (70%), Gaps = 30/244 (12%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG PLDPRKIQEHFEDF+EDLFEEL K+GEIESLNICDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRR-----------------RHSRSRSRSRSPYRHRSHEDRSH 163
MH+K +SR+LRR+LFGRYRR R+ R R P+R SH DR
Sbjct: 171 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKREYDRRDPPHREFSHRDRDR 230
Query: 164 S----GHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKI 219
G G+R +R + E R R R SP REGSEERRA+I
Sbjct: 231 EFYRHGSGKRSSERSERQERDGSRGR---------RQASPKRGGSPGGGREGSEERRARI 281
Query: 220 EQWN 223
EQWN
Sbjct: 282 EQWN 285
>gi|145324040|ref|NP_001077609.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|332192738|gb|AEE30859.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 246
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/236 (65%), Positives = 175/236 (74%), Gaps = 14/236 (5%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG PLDPRKIQEHFEDF+EDLFEEL K+GEIESLNICDNLADHM+G
Sbjct: 1 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 60
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 61 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 120
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSR-----SPYRHRSHEDRSHSGHGRRYDDRDK 175
MH+K +SR+LRR+LFGRYRR + R SP R ++ R S + DRD+
Sbjct: 121 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 180
Query: 176 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP--------VREGSEERRAKIEQWN 223
+ RS+ S R+ R S GRR SP REGSEERRA+IEQWN
Sbjct: 181 EFYRHGSGKRSSERSERQERDGS-RGRRQASPKRGGSPGGGREGSEERRARIEQWN 235
>gi|15217666|ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 8; Short=AtC3H8
gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small
subunit from Oryza sativa. ESTs gb|AA586295 and
gb|AA597332 come from this gene [Arabidopsis thaliana]
gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10 [Arabidopsis thaliana]
gi|12744991|gb|AAK06875.1|AF344324_1 putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|19699275|gb|AAL91249.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary factor protein [Arabidopsis thaliana]
gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|21689611|gb|AAM67427.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|332192737|gb|AEE30858.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 296
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/236 (65%), Positives = 175/236 (74%), Gaps = 14/236 (5%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG PLDPRKIQEHFEDF+EDLFEEL K+GEIESLNICDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSR-----SPYRHRSHEDRSHSGHGRRYDDRDK 175
MH+K +SR+LRR+LFGRYRR + R SP R ++ R S + DRD+
Sbjct: 171 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 230
Query: 176 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP--------VREGSEERRAKIEQWN 223
+ RS+ S R+ R S GRR SP REGSEERRA+IEQWN
Sbjct: 231 EFYRHGSGKRSSERSERQERDGS-RGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>gi|99014572|emb|CAK22276.1| putative U2 snRNP auxiliary factor [Chenopodium rubrum]
Length = 151
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/129 (91%), Positives = 125/129 (96%)
Query: 14 AQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAA 73
+QGN +DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQ+REEE+AA
Sbjct: 9 SQGNAIDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQYREEEEAA 68
Query: 74 RALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQ 133
A ++LSGRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKRISR+LRRQ
Sbjct: 69 NAHRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENNCNRGGYCNFMHLKRISRELRRQ 128
Query: 134 LFGRYRRRH 142
LFGRYRRRH
Sbjct: 129 LFGRYRRRH 137
>gi|297740057|emb|CBI30239.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/128 (90%), Positives = 122/128 (95%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DM+TPGVD QG PLDPRKIQEHFEDFYEDLFEEL+KYGEIESLNICDNLADHMVG
Sbjct: 51 MYQRPDMVTPGVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEE AA AL++L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNF 170
Query: 121 MHLKRISR 128
MHLK+ISR
Sbjct: 171 MHLKKISR 178
>gi|356521086|ref|XP_003529189.1| PREDICTED: splicing factor U2af small subunit A-like isoform 1
[Glycine max]
gi|356521088|ref|XP_003529190.1| PREDICTED: splicing factor U2af small subunit A-like isoform 2
[Glycine max]
gi|356521090|ref|XP_003529191.1| PREDICTED: splicing factor U2af small subunit A-like isoform 3
[Glycine max]
Length = 271
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 127/140 (90%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVD QG PLDPRKIQ+HFEDFYED+F EL K+G+IESLN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA+AL +L GRFY RPII DFSPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAKALHALHGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRR 140
MH+K I RDLRR+LFGR+ R
Sbjct: 171 MHVKLIGRDLRRRLFGRHHR 190
>gi|168004337|ref|XP_001754868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693972|gb|EDQ80322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 283
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/246 (61%), Positives = 169/246 (68%), Gaps = 29/246 (11%)
Query: 1 MYQRLDM-ITPGVDAQGNP--LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADH 57
MYQ D GVD GN DPRK+QEHFEDFYED+FEEL+KYGEIE+LN+CDNLADH
Sbjct: 51 MYQSPDAGFHGGVDQHGNIQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADH 110
Query: 58 MVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY 117
M+GNVYV+FREEE AA AL +LSGRFYAGRPII+DFSPVTDFREATCRQYEENTCNRGGY
Sbjct: 111 MIGNVYVKFREEEHAAAALNALSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGY 170
Query: 118 CNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRD--- 174
CNFMHLK+ISR+LRR+LFG YR RSRSRS SPY + RRY DRD
Sbjct: 171 CNFMHLKKISRELRRKLFGNYR---RRSRSRSHSPY---GRGEARGPPSPRRYGDRDFYD 224
Query: 175 ----------KYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNR 224
RR + R RSP REGS ERRAKI+QWNR
Sbjct: 225 SRRGGGRGGGGRGRGYGRRRDRSRSRTPTRRGRSPA-------AREGSAERRAKIDQWNR 277
Query: 225 EREQQE 230
ERE+++
Sbjct: 278 EREERQ 283
>gi|195622372|gb|ACG33016.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195639644|gb|ACG39290.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 284
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 117/153 (76%), Positives = 139/153 (90%), Gaps = 2/153 (1%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQGNP+DP +IQE FEDFYED+F EL+K+GEIESL++CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV+FREEEQAARAL++L GR+Y+GRPII +FSPVTDFREATCRQ+EE++CNRGGYCNF
Sbjct: 111 NVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSR-SRSP 152
MH+K++ RDLRR+LFG + R RS SR SRSP
Sbjct: 171 MHVKQVGRDLRRKLFG-HLHRSLRSHSRGSRSP 202
>gi|224132068|ref|XP_002328177.1| predicted protein [Populus trichocarpa]
gi|222837692|gb|EEE76057.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 114/128 (89%), Positives = 122/128 (95%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQGNP+DPR+IQ+HFE+FYEDLFEEL KYGEIESLN+CDNLADHMVG
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPRRIQQHFEEFYEDLFEELRKYGEIESLNVCDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEE A+ ALK+L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEHASNALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENACNRGGYCNF 170
Query: 121 MHLKRISR 128
MHLKRI R
Sbjct: 171 MHLKRIGR 178
>gi|15723291|gb|AAL06331.1|AF409139_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 296
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/236 (64%), Positives = 173/236 (73%), Gaps = 14/236 (5%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG PLDPRKIQEHFEDF+EDLFEEL K+GEIESLNICDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN C RGGYCNF
Sbjct: 111 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCYRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSR-----SPYRHRSHEDRSHSGHGRRYDDRDK 175
MH+K +SR+LRR+L GRYRR + R SP R ++ R S + DRD+
Sbjct: 171 MHVKLVSRELRRKLSGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 230
Query: 176 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP--------VREGSEERRAKIEQWN 223
+ RS+ S R+ R S GRR SP REGSEERRA+IEQWN
Sbjct: 231 EFYRHGSGKRSSERSERQERDGS-RGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>gi|218197274|gb|EEC79701.1| hypothetical protein OsI_20991 [Oryza sativa Indica Group]
Length = 308
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 105/135 (77%), Positives = 126/135 (93%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL+K+GE+E+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLF 135
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
>gi|115465463|ref|NP_001056331.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|75323083|sp|Q6AUG0.1|U2AFB_ORYSJ RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 38; Short=OsC3H38
gi|50511477|gb|AAT77399.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa Japonica
Group]
gi|113579882|dbj|BAF18245.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|215687259|dbj|BAG91824.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740784|dbj|BAG96940.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632568|gb|EEE64700.1| hypothetical protein OsJ_19555 [Oryza sativa Japonica Group]
Length = 304
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 105/135 (77%), Positives = 126/135 (93%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL+K+GE+E+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLF 135
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
>gi|3850816|emb|CAA77132.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 301
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 105/135 (77%), Positives = 126/135 (93%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL+K+GE+E+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLF 135
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
>gi|224068961|ref|XP_002326241.1| predicted protein [Populus trichocarpa]
gi|222833434|gb|EEE71911.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/132 (86%), Positives = 122/132 (92%), Gaps = 2/132 (1%)
Query: 1 MYQRLDMITPGVD--AQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM 58
MYQR DM+TPGVD AQ LDPRKIQ+HFEDFYEDLFEEL+KYG+IESLNICDNLADHM
Sbjct: 51 MYQRPDMLTPGVDPQAQSQSLDPRKIQDHFEDFYEDLFEELSKYGDIESLNICDNLADHM 110
Query: 59 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 118
VGNVYVQFREEE AA AL++L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYC
Sbjct: 111 VGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYC 170
Query: 119 NFMHLKRISRDL 130
NFMHLK+ISR L
Sbjct: 171 NFMHLKKISRWL 182
>gi|357132564|ref|XP_003567899.1| PREDICTED: splicing factor U2af small subunit B-like [Brachypodium
distachyon]
Length = 308
Score = 239 bits (610), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 104/135 (77%), Positives = 126/135 (93%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG+ +DP K+QEHFEDFYED++EEL+K+GE+E+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGHTIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLF 135
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
>gi|357438827|ref|XP_003589690.1| Splicing factor U2af small subunit B [Medicago truncatula]
gi|355478738|gb|AES59941.1| Splicing factor U2af small subunit B [Medicago truncatula]
Length = 272
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/167 (65%), Positives = 129/167 (77%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR D+ITPGVD G P+DPR+IQ+HFEDFYED+F EL+K+G +E+LN+CDNLADHM+G
Sbjct: 51 MYQRPDIITPGVDPNGQPIDPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV F+EE+ AA AL SL GRFY GRPI+ DFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVLFKEEDHAAAALASLRGRFYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHG 167
MH+K+I R+LRR+LF RR R R ED G G
Sbjct: 171 MHVKKIGRELRRKLFSSQRREAEAENERGRVIEIMIRVEDGVVIGIG 217
>gi|297597337|ref|NP_001043811.2| Os01g0667800 [Oryza sativa Japonica Group]
gi|255673535|dbj|BAF05725.2| Os01g0667800 [Oryza sativa Japonica Group]
Length = 207
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 104/126 (82%), Positives = 119/126 (94%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPR++QEHFEDFYED+FEEL+K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA A +L GRFY+GRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 121 MHLKRI 126
H+K+I
Sbjct: 171 THVKQI 176
>gi|326522777|dbj|BAJ88434.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 103/135 (76%), Positives = 124/135 (91%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG + P K+QEHFEDFYED++EEL+K+GE+E+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGVAIAPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLF 135
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 11/56 (19%)
Query: 174 DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 229
D+Y + RR+ + P RRGRS P RE SEERRAKIEQWNRERE++
Sbjct: 281 DRYDDGPRRRYGGSPP--RRGRS---------PPARENSEERRAKIEQWNREREEK 325
>gi|217073019|gb|ACJ84869.1| unknown [Medicago truncatula]
Length = 228
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 102/135 (75%), Positives = 121/135 (89%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR D+ITPGVD G P+DPR+IQ+HFEDFYED+F EL+K+G +E+LN+CDNLADHM+G
Sbjct: 51 MYQRPDIITPGVDPNGQPIDPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV F+EE+ AA AL SL GRFY GRPI+ DFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVLFKEEDHAAAALASLRGRFYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 121 MHLKRISRDLRRQLF 135
MH+K+I R+LRR+LF
Sbjct: 171 MHVKKIGRELRRKLF 185
>gi|56202175|dbj|BAD73653.1| U2 auxiliary factor small chain-like [Oryza sativa Japonica Group]
Length = 258
Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 151/230 (65%), Gaps = 18/230 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPR++QEHFEDFYED+FEEL+K+GEIE+LN+CDNLADHM+G
Sbjct: 46 MYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIG 105
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA A +L GRFY+GRPIIVDFSPVTDFREATCRQ
Sbjct: 106 NVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG------------ 153
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 180
+ RDLR++LFG YR+ RHR GR
Sbjct: 154 -----LGRDLRKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGG 208
Query: 181 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
S RH RR SP RR SPVRE SEERRAKIEQWNRER++++
Sbjct: 209 SSRHERHDDGGRRRHGGSP-PRRARSPVRESSEERRAKIEQWNRERDEKQ 257
>gi|222619017|gb|EEE55149.1| hypothetical protein OsJ_02948 [Oryza sativa Japonica Group]
Length = 263
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 151/230 (65%), Gaps = 18/230 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPR++QEHFEDFYED+FEEL+K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA A +L GRFY+GRPIIVDFSPVTDFREATCRQ
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG------------ 158
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 180
+ RDLR++LFG YR+ RHR GR
Sbjct: 159 -----LGRDLRKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGG 213
Query: 181 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
S RH RR SP RR SPVRE SEERRAKIEQWNRER++++
Sbjct: 214 SSRHERHDDGGRRRHGGSP-PRRARSPVRESSEERRAKIEQWNRERDEKQ 262
>gi|125527192|gb|EAY75306.1| hypothetical protein OsI_03197 [Oryza sativa Indica Group]
Length = 263
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 151/230 (65%), Gaps = 18/230 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPR++QEHFEDFYED+FEEL+K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA A +L GRFY+GRPIIVDFSPVTDFREATCRQ
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG------------ 158
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 180
+ RDLR++LFG YR+ RHR GR
Sbjct: 159 -----LGRDLRKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGG 213
Query: 181 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
S RH RR SP RR SPVRE SEERRAKIEQWNRER++++
Sbjct: 214 SSRHERHDDGGRRRHGGSP-PRRARSPVRESSEERRAKIEQWNRERDEKQ 262
>gi|125527197|gb|EAY75311.1| hypothetical protein OsI_03202 [Oryza sativa Indica Group]
Length = 265
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/232 (56%), Positives = 152/232 (65%), Gaps = 20/232 (8%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DPR++QEHFEDFYED+FEEL+K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREE+QAA A +L GRFY+GRPIIVDFSPVTDFREATCRQ
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG------------ 158
Query: 121 MHLKRISRDLRRQLFGRYRR--RHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 178
+ RDLR++LFG YR+ R RHR GR
Sbjct: 159 -----LGRDLRKKLFGHYRKPQRGRSRSPSPSPSPRHRRERHDRDDYRGRDDYSGGGGRR 213
Query: 179 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 230
S RH RR SP RR SPVRE SEERRAKIEQWNRER++++
Sbjct: 214 GGSSRHERHDDGGRRRHGGSP-PRRARSPVRESSEERRAKIEQWNRERDEKQ 264
>gi|302756127|ref|XP_002961487.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
gi|300170146|gb|EFJ36747.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
Length = 200
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/126 (86%), Positives = 118/126 (93%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DM TPG+D G +D +KIQEHFEDFYED+FEEL+KYGEIESLN+CDNLADHMVG
Sbjct: 51 MYQRPDMATPGMDLNGQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNVCDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEE+AA ALK+LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEEAAAALKALSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 121 MHLKRI 126
MHL+RI
Sbjct: 171 MHLRRI 176
>gi|384254294|gb|EIE27768.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 248
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 96/132 (72%), Positives = 117/132 (88%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
PG D P+D RK QEHFEDFYED+FEE++KYG+IE LN+CDNLADHMVGNVY++F +E
Sbjct: 61 PGPDGLPMPVDARKSQEHFEDFYEDIFEEMDKYGQIEHLNVCDNLADHMVGNVYIKFVDE 120
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ AARAL+ L+GRFYAGRPI+++FSPVTDFREATCRQYEENTC RGGYCNFMHL+ IS+
Sbjct: 121 DAAARALQGLTGRFYAGRPIMIEFSPVTDFREATCRQYEENTCTRGGYCNFMHLRPISKG 180
Query: 130 LRRQLFGRYRRR 141
LR+ LFGRY+++
Sbjct: 181 LRKDLFGRYKKK 192
>gi|307107585|gb|EFN55827.1| hypothetical protein CHLNCDRAFT_57737 [Chlorella variabilis]
Length = 395
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 121/140 (86%), Gaps = 1/140 (0%)
Query: 1 MYQRLDMITP-GVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMV 59
MYQ + P G D P+DP+K+QE FEDFYED+F EL K+GE+E LN+CDNLADHMV
Sbjct: 51 MYQNPILNAPLGPDGLPMPVDPKKVQEFFEDFYEDIFLELAKFGEVEYLNVCDNLADHMV 110
Query: 60 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 119
GNVYV+FR+EE+AARAL+ + GR+YAG+PI+V+FSPVTDFREATCRQYEEN C+RGGYCN
Sbjct: 111 GNVYVKFRDEEEAARALQGMQGRYYAGKPIVVEFSPVTDFREATCRQYEENNCSRGGYCN 170
Query: 120 FMHLKRISRDLRRQLFGRYR 139
FMH++ +SR+LR+QLFGRY+
Sbjct: 171 FMHVRPVSRELRKQLFGRYK 190
>gi|302776046|ref|XP_002971319.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
gi|300161301|gb|EFJ27917.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
Length = 275
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/122 (86%), Positives = 114/122 (93%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DM TPG+D G +D +KIQEHFEDFYED+FEEL+KYGEIESLN+CDNLADHMVG
Sbjct: 51 MYQRPDMATPGMDLNGQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNVCDNLADHMVG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFREEE+AA ALK+LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEEAAAALKALSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 121 MH 122
MH
Sbjct: 171 MH 172
>gi|159476640|ref|XP_001696419.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
gi|158282644|gb|EDP08396.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
Length = 273
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 117/140 (83%), Gaps = 1/140 (0%)
Query: 1 MYQRLDMITP-GVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMV 59
MYQ + P G D +DPR QEHFEDFYED+FEEL +GE+E+LN+CDN ADHMV
Sbjct: 51 MYQNPLLNAPLGPDGLPIRVDPRAAQEHFEDFYEDVFEELAAHGELENLNVCDNFADHMV 110
Query: 60 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 119
GNVY +FR+E+ AARAL +L GR+Y GRPIIV+FSPVTDFREATCRQYEENTCNRGGYCN
Sbjct: 111 GNVYAKFRDEDAAARALTALQGRYYDGRPIIVEFSPVTDFREATCRQYEENTCNRGGYCN 170
Query: 120 FMHLKRISRDLRRQLFGRYR 139
FMHLK ISR+LR++LFGRY+
Sbjct: 171 FMHLKPISRELRKKLFGRYK 190
>gi|255089300|ref|XP_002506572.1| predicted protein [Micromonas sp. RCC299]
gi|226521844|gb|ACO67830.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/120 (79%), Positives = 108/120 (90%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSL 79
DPR IQEHFEDFYED+FEEL KYGEIE LN+CDN +DH++GNVYV+FREEE A AL +L
Sbjct: 70 DPRAIQEHFEDFYEDIFEELAKYGEIEGLNVCDNTSDHLIGNVYVKFREEESALAALNAL 129
Query: 80 SGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYR 139
SGRFY+GRPI+ +FSPVTDFRE+TCRQYEENTCNRGGYCNFMHLK ISR LR+ LFGRY+
Sbjct: 130 SGRFYSGRPILCEFSPVTDFRESTCRQYEENTCNRGGYCNFMHLKPISRQLRKILFGRYK 189
>gi|303287873|ref|XP_003063225.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455057|gb|EEH52361.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 324
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 96/120 (80%), Positives = 108/120 (90%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSL 79
D RK+QEHFEDFYED+FEEL YGEIE LNICDNLADH+VGNVYV++REEE A AL +L
Sbjct: 74 DARKMQEHFEDFYEDIFEELATYGEIEGLNICDNLADHLVGNVYVKYREEESALAALNAL 133
Query: 80 SGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYR 139
SGRFYAGRPI+ +FSPVTDFRE+TCRQYEENTC RGGYCNFMHLK ISR+LR+ LFGRY+
Sbjct: 134 SGRFYAGRPILCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHLKPISRNLRKILFGRYK 193
>gi|414878158|tpg|DAA55289.1| TPA: hypothetical protein ZEAMMB73_300759 [Zea mays]
Length = 172
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/116 (81%), Positives = 108/116 (93%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG P+DP K+QEHFEDFYED++EEL K+GEIE+LN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 116
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGG
Sbjct: 111 NVYVQFREEEQAAVAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGG 166
>gi|302846943|ref|XP_002955007.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
gi|300259770|gb|EFJ43995.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
Length = 288
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/139 (70%), Positives = 117/139 (84%), Gaps = 1/139 (0%)
Query: 1 MYQRLDMITP-GVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMV 59
MYQ + P G D +DP+ QEHFEDFYED+FEEL ++GE+E+LN+CDN ADHMV
Sbjct: 51 MYQNPLLNAPLGPDGLPIRVDPKAAQEHFEDFYEDVFEELAQHGELENLNVCDNFADHMV 110
Query: 60 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 119
GNVY +FR+E+ AARAL++L GR+Y GRPI+V+FSPVTDFREATCRQYEENTCNRGGYCN
Sbjct: 111 GNVYAKFRDEDAAARALQALQGRYYDGRPIVVEFSPVTDFREATCRQYEENTCNRGGYCN 170
Query: 120 FMHLKRISRDLRRQLFGRY 138
FMHLK I R+LRR+LFGRY
Sbjct: 171 FMHLKPIGRELRRKLFGRY 189
>gi|193875780|gb|ACF24526.1| mRNA splicing factor U2 associated factor [Gymnochlora stellata]
Length = 182
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 115/144 (79%), Gaps = 1/144 (0%)
Query: 1 MYQRLDMITP-GVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMV 59
MYQ + P G D PL+P +Q HF+ FY+D++EELN +G+IE+LN+CDNL+DHM+
Sbjct: 39 MYQNPALTAPLGKDGLPKPLNPYNLQSHFQKFYKDIYEELNFFGDIENLNVCDNLSDHMI 98
Query: 60 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 119
GNVYV++R+E+ A +ALKS++GRFYAGR I+ + SPVTDFRE+TCRQY++NTC+RGGYCN
Sbjct: 99 GNVYVKYRQEKSAMKALKSINGRFYAGRIIVAETSPVTDFRESTCRQYDDNTCSRGGYCN 158
Query: 120 FMHLKRISRDLRRQLFGRYRRRHS 143
FMHLK I R LR++LF R + S
Sbjct: 159 FMHLKPIKRSLRKELFTRVTKSKS 182
>gi|325180898|emb|CCA15308.1| splicing factor U2AF 35 kDa subunit putative [Albugo laibachii
Nc14]
Length = 331
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 128/176 (72%), Gaps = 21/176 (11%)
Query: 1 MYQRLDMITPGVDAQGNP--LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM 58
MYQ + ++ + G+P LD +K+ E FEDFYE++FEEL K+G++E LNICDNL DH+
Sbjct: 100 MYQ--NPLSQIIAQNGDPSGLDQKKVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHL 157
Query: 59 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 118
VGNVYV++ +EE AA A KSL GRFYAGRP++ +FSPVTDFREA CRQ++E TCNRGGYC
Sbjct: 158 VGNVYVKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYC 217
Query: 119 NFMHLKRISRDLRRQ---LFGRYR-------------RRHSRSRSRSRSPYRHRSH 158
NFMH+K +SR ++R+ L+ RY+ R HS+SRSRS P +H+ H
Sbjct: 218 NFMHVKTVSRSMQRELERLYNRYKPPRRGKSRSVSKSRGHSKSRSRS-PPRKHKKH 272
>gi|301115075|ref|XP_002999307.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
gi|262111401|gb|EEY69453.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
Length = 340
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 108/136 (79%), Gaps = 4/136 (2%)
Query: 1 MYQRLDMITPGVDAQGNP--LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM 58
MYQ + I + G+P LD R++ E FEDFYE++FEEL K+G++E LNICDNL DH+
Sbjct: 106 MYQ--NPIAQVIAQNGDPASLDQRQVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHL 163
Query: 59 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 118
VGNVY ++ +EE AA A KSL GRFYAGRP++ +FSPVTDFREA CRQ++E TCNRGGYC
Sbjct: 164 VGNVYAKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYC 223
Query: 119 NFMHLKRISRDLRRQL 134
NFMH+K +SR ++R+L
Sbjct: 224 NFMHIKTVSRSMQREL 239
>gi|323454278|gb|EGB10148.1| hypothetical protein AURANDRAFT_14519, partial [Aureococcus
anophagefferens]
Length = 186
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 80/123 (65%), Positives = 100/123 (81%), Gaps = 2/123 (1%)
Query: 14 AQGNP--LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
A G+P LDP+K+QE F+DFYE++++EL KYGEIE LN+C+NL DHMVGNVY +F +EE
Sbjct: 61 AGGDPSQLDPKKVQEEFDDFYEEVYDELAKYGEIEELNVCENLGDHMVGNVYAKFADEEH 120
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
+LK+L GRFYAGRP++ +FSPVTDFREA CRQY+E C RGGYCNFMH++ SR LR
Sbjct: 121 TDASLKALFGRFYAGRPLVCEFSPVTDFREARCRQYDEAVCTRGGYCNFMHIRTPSRSLR 180
Query: 132 RQL 134
R L
Sbjct: 181 RDL 183
>gi|412985218|emb|CCO20243.1| predicted protein [Bathycoccus prasinos]
Length = 307
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 106/133 (79%), Gaps = 2/133 (1%)
Query: 11 GVDAQGN-PLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
G +AQG +P+ +QEH+EDF D+FEEL +GEIE LN+CDNLADHMVGNVYV+F +E
Sbjct: 62 GGNAQGARTSEPQDVQEHYEDFCHDIFEELAIHGEIEELNVCDNLADHMVGNVYVKFADE 121
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI-SR 128
+ A +A +SL GR+Y GRPI +FSPVTDFRE+TCRQYEENTC RGGYCNFMH++ I ++
Sbjct: 122 DDAMKAKQSLDGRYYMGRPIKCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHVRPIKNQ 181
Query: 129 DLRRQLFGRYRRR 141
L LFGRY ++
Sbjct: 182 TLAHALFGRYGKK 194
>gi|82541542|ref|XP_725006.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479849|gb|EAA16571.1| similar to RIKEN cDNA 2010107D16 gene [Plasmodium yoelii yoelii]
Length = 309
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 146/225 (64%), Gaps = 14/225 (6%)
Query: 14 AQGNPLDPRKIQ---EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE 70
A+G +D + +HFE+FYE++F+EL KYGEIE + +CDN+ DH++GNVY+++ E+
Sbjct: 62 AEGQMVDDEVLDQAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHED 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +A+K L+GRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYCNFMH+K + R +
Sbjct: 122 YAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRTV 181
Query: 131 RRQLFGR-YR-----RRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRH 184
+R+L R Y+ +++ +SR S +R+ + DR++ R + RDKY + +
Sbjct: 182 KRRLHKRMYKKFPMYKKNKKSRDDSDGDHRYDRYRDRNN----RDKNKRDKYGNNYNSSR 237
Query: 185 RSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 229
R G+ R + P RE S ERR KIE+WN+ERE +
Sbjct: 238 RRHRSQSSNGQD-DDNQRSHKYPKRENSLERREKIERWNKEREMK 281
>gi|124803997|ref|XP_001347871.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
gi|23496123|gb|AAN35784.1|AE014838_62 U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
Length = 294
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 144/240 (60%), Gaps = 19/240 (7%)
Query: 8 ITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFR 67
I G + LD K +HFE+FYE++F+EL KYGEIE + +CDN+ DH++GNVY+++
Sbjct: 61 IAEGQMVEDEVLD--KAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 68 EEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS 127
E+ A +A+ L+GRFYAG+P+ ++++PVTDFREA CRQ+ E C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVNELNGRFYAGKPLQIEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 128 RDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRY---DDRDKYYESRSRRH 184
R ++R+LF R +++ + R R+ +D S GRR + +DKY R H
Sbjct: 179 RTVKRKLFRRMYKKYPEYKKR-------RARKDDS-DDDGRRESYREGKDKYKRDRRSSH 230
Query: 185 RSTSP---SHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ---EEAYKGNTD 238
+S R Y RE S ERR KIE+WN+ERE + +E K N D
Sbjct: 231 HYSSKRKNRSDNEDDDDDEERSYKHARRENSAERREKIERWNKEREMKNMNKEDNKSNAD 290
>gi|302808806|ref|XP_002986097.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
gi|300146245|gb|EFJ12916.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
Length = 262
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 140/231 (60%), Gaps = 25/231 (10%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ + ITPG + + ++Q+ + FYED+F+E++K+G++E+L IC+N +H+ G
Sbjct: 53 MYQSPE-ITPGQAYRNTAISKEELQKDLDAFYEDVFKEVSKHGKVEALKICNNFGNHLAG 111
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFR EE A A+ +L+GRFY+GRPI +FSPVTDFREA+CRQ E+ C+RGG CNF
Sbjct: 112 NVYVQFRHEEHAVAAMAALNGRFYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCCNF 171
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGR--RYDDRDKYYE 178
+HL R SR L R+L G RS S R +R R E+ H R R +D ++ Y
Sbjct: 172 LHLYRPSRALMRELMG------DRSSSPPRRDHRRRPREEDGERDHKRRPREEDGERDYR 225
Query: 179 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 229
RH SP R RE ER AKIE+WN+ERE++
Sbjct: 226 RDGERHTRRSPPWR----------------RESDRERLAKIERWNKEREKE 260
>gi|68070599|ref|XP_677211.1| U2 snRNP auxiliary factor, small subunit [Plasmodium berghei strain
ANKA]
gi|56497237|emb|CAI00252.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
berghei]
Length = 304
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 150/245 (61%), Gaps = 15/245 (6%)
Query: 14 AQGNPLDPRKIQE---HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE 70
A+G +D + + HFE+FYE++F+EL KYGEIE + +CDN+ DH++GNVY+++ E+
Sbjct: 62 AEGQMVDDEVLDQAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHED 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +A+K L+GRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYCNFMH+K + R +
Sbjct: 122 YAEKAIKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRTV 181
Query: 131 RRQLFGRYRRR------HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRH 184
+R+L R ++ + +S+ S +RH + DR+ R RDKY S +
Sbjct: 182 KRRLHKRMYKKFPMYKKNKKSKDDSDGEHRHDRYRDRN----NRDKHKRDKYGNSYNSSR 237
Query: 185 RSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQ 244
R + R Y P RE S ERR KIE+WN+ERE + + K N + + +
Sbjct: 238 RRHRSQSSNDQD-DDNERSYKHPKRENSLERREKIERWNKEREMK-NSQKNNNENEDTTK 295
Query: 245 GINND 249
NND
Sbjct: 296 VENND 300
>gi|156086588|ref|XP_001610703.1| U2 splicing factor subunit [Babesia bovis T2Bo]
gi|154797956|gb|EDO07135.1| U2 splicing factor subunit, putative [Babesia bovis]
Length = 251
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 123/217 (56%), Gaps = 47/217 (21%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
K +HFE+FYE++F EL KYGEIE + +CDN+ DH++GNVYV++R+E AA A+ LSGR
Sbjct: 74 KAADHFEEFYEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYVKYRDENSAAHAISMLSGR 133
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL-------F 135
FY G+PI +++PVTDFREA CRQ+ E C RGGYCNFMH+K + R +RR+L F
Sbjct: 134 FYGGKPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVPRSVRRKLDERMYAEF 193
Query: 136 GRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
Y++R RS RS RY D + S
Sbjct: 194 PEYKKRALRSSERS------------------GRYVDSEALITFHS-------------- 221
Query: 196 SRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEA 232
Y P R+ S+ERR IE WNRER+ +E A
Sbjct: 222 --------YERPKRQTSQERRNMIEMWNRERDARENA 250
>gi|161899399|ref|XP_001712926.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
gi|75756420|gb|ABA27314.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
Length = 193
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 105/137 (76%), Gaps = 1/137 (0%)
Query: 1 MYQRLDMITP-GVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMV 59
+YQ + P G D P +P K Q+ FE FYEDLF+E++ +G+I+++ +CDNL+DH++
Sbjct: 51 LYQNPALKAPVGKDGLPKPKNPYKSQKQFEFFYEDLFQEMSFFGDIDNIYVCDNLSDHLI 110
Query: 60 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 119
GNVYV+F +++ A +ALKS+SGRFY R I+ + SPVTDFRE+TCRQYE+NTCNRGGYCN
Sbjct: 111 GNVYVKFLKDKSAMKALKSVSGRFYDKRLIVAETSPVTDFRESTCRQYEDNTCNRGGYCN 170
Query: 120 FMHLKRISRDLRRQLFG 136
FMHLK + R R ++F
Sbjct: 171 FMHLKPLKRSFRNKIFS 187
>gi|308812528|ref|XP_003083571.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
gi|116055452|emb|CAL58120.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
Length = 246
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 106/154 (68%), Gaps = 15/154 (9%)
Query: 12 VDAQGNPLDPR-----------KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
+ G +DPR Q HFE F EDLFEEL++ GEIE +N+CDN DHM G
Sbjct: 54 AEGAGGTVDPRDAASGKSASASAGQGHFEAFVEDLFEELDECGEIEGVNVCDNATDHMAG 113
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV+F +E+ A RAL+ L GR+Y GRPI+V++SPVTDF+E+TCRQYEEN+C RGGYCNF
Sbjct: 114 NVYVKFVDEDGARRALEKLQGRYYDGRPILVEYSPVTDFKESTCRQYEENSCTRGGYCNF 173
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYR 154
MHL+ I R +R+QL RRR + S + S R
Sbjct: 174 MHLRPIGRSMRKQL----RRRATGSSTMDASTRR 203
>gi|330835935|ref|XP_003292017.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
gi|325077756|gb|EGC31448.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
Length = 429
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 106/155 (68%), Gaps = 9/155 (5%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
++Q+HF++FYED+FE L KYG+++ LN+C NL DH+VGNVYV++ E++A ++K L GR
Sbjct: 75 ELQQHFDEFYEDIFEGLTKYGQVDLLNVCANLGDHLVGNVYVKYAREDEANESIKGLKGR 134
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRH 142
FY GRPII +FSPVTDF EA CRQY+ CNRGGYCNFMHL S+ L+ +LFG
Sbjct: 135 FYDGRPIIAEFSPVTDFTEARCRQYDIGACNRGGYCNFMHLHTPSKSLQIKLFG------ 188
Query: 143 SRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYY 177
RSRSP +E RY+DRD+ Y
Sbjct: 189 ---DRRSRSPSPRGRYERGGGGRDQERYNDRDRDY 220
>gi|432930414|ref|XP_004081462.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 230
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR+EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKEEDAEKAMLDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+PI + SPVTDFREA C QYE C RGG+CNFMHLK ISRDLRRQL+G R+
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCHQYETGGCTRGGFCNFMHLKPISRDLRRQLYGHRRKS 192
Query: 142 HSRSRSRSR 150
R RSR R
Sbjct: 193 RQRPRSRDR 201
>gi|145354635|ref|XP_001421585.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581823|gb|ABO99878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 243
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 90/108 (83%)
Query: 25 QEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
QE FE F ED+FEEL++ GEIE +N+CDN+ DHM+GNVYV+F EEE A RA++ L GR+Y
Sbjct: 77 QEGFEAFVEDVFEELDECGEIEGVNVCDNVTDHMMGNVYVKFVEEEAAGRAVEKLRGRYY 136
Query: 85 AGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR 132
GRPI +FSPVTDFRE+TCRQYEEN+C RGGYCNFMHLK I R +R+
Sbjct: 137 DGRPIAAEFSPVTDFRESTCRQYEENSCTRGGYCNFMHLKPIGRGMRK 184
>gi|156543322|ref|XP_001606160.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Nasonia
vitripennis]
Length = 242
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 102/132 (77%), Gaps = 2/132 (1%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A +A+ L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYR-R 140
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRDLRR L+ R +
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRDLRRYLYSRKKGG 194
Query: 141 RHSRSRSRSRSP 152
RSRSRS+SP
Sbjct: 195 GKGRSRSRSKSP 206
>gi|357017169|gb|AET50613.1| hypothetical protein [Eimeria tenella]
Length = 252
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 121/205 (59%), Gaps = 30/205 (14%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+HFE F+ ++FEEL KYGE+E + +CDN+ DH++GNVYV++ +++ A +AL +L GR+ A
Sbjct: 77 DHFEAFFSEVFEELYKYGEVEDMVVCDNIGDHIIGNVYVKYSDDDAAKKALSALQGRYDA 136
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRS 145
G+PI +F+PVTDFREA CRQ+ + C RGGYCNFMHLK + R L+R+LF + H
Sbjct: 137 GKPIQAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVPRSLKRKLFNKMYEEHPEY 196
Query: 146 RSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYH 205
R R R R RS H +HR RSP R
Sbjct: 197 RQRVRGGRRSRSRSGSPH-------------------KHR-----------RSPSLHRPE 226
Query: 206 SPVREGSEERRAKIEQWNREREQQE 230
P R SEERRA I QWN+ER+ +
Sbjct: 227 RPERRTSEERRAMIAQWNQERDAAQ 251
>gi|443704810|gb|ELU01671.1| hypothetical protein CAPTEDRAFT_164217 [Capitella teleta]
Length = 234
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 101/127 (79%), Gaps = 3/127 (2%)
Query: 19 LDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALK 77
+ ++Q+H++DF+E++F EL +KYGEIE +N+CDNL DH+VGNVY++FR EE A + ++
Sbjct: 69 MSDEQVQQHYDDFFEEVFVELEDKYGEIEEMNVCDNLGDHLVGNVYIKFRSEESAEKGVE 128
Query: 78 SLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
L+ R++ GRPI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+G
Sbjct: 129 ELNNRWFNGRPIHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG- 187
Query: 138 YRRRHSR 144
R RHS+
Sbjct: 188 -RSRHSK 193
>gi|391345692|ref|XP_003747118.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Metaseiulus
occidentalis]
Length = 229
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 99/124 (79%), Gaps = 1/124 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
D + ++QEHF++F+ED+F EL +KYGEIE +N+CDNL DH+VGNVYV+FR+E+
Sbjct: 63 DGSHTNMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRKEDD 122
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+K L+ R++AGRP++ + SPVTDFREA CRQYE C R G+CNFMHL+ ISR+LR
Sbjct: 123 AEKAVKELNNRWFAGRPVVAELSPVTDFREACCRQYEMGECTRSGFCNFMHLRPISRELR 182
Query: 132 RQLF 135
++L+
Sbjct: 183 KELY 186
>gi|410896554|ref|XP_003961764.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 232
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 12 VDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEE 70
D + ++QEHF++F+E++F E+ KYGE+E +NICDNL DH+VGNVYV+FR EE
Sbjct: 62 ADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEE 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+L
Sbjct: 122 DAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 181
Query: 131 RRQLFGRYRRRH 142
RR+L+GR ++ H
Sbjct: 182 RRELYGRRKKGH 193
>gi|350534948|ref|NP_001232170.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127858|gb|ACH44356.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+GR R++
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRLRKK 192
Query: 142 H 142
H
Sbjct: 193 H 193
>gi|321468463|gb|EFX79448.1| hypothetical protein DAPPUDRAFT_52589 [Daphnia pulex]
Length = 237
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 98/130 (75%), Gaps = 5/130 (3%)
Query: 9 TPGVDAQGNPLDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFR 67
PG+ + + QEHF++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 67 VPGIVTMSD----EEAQEHFDNFFEDVFAECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 122
Query: 68 EEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS 127
EE A +A+ L+ R++AGRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 123 REEDAEKAVNDLNNRWFAGRPVYAELSPVTDFREACCRQYELGECTRSGFCNFMHLKPIS 182
Query: 128 RDLRRQLFGR 137
R+LRR+L+GR
Sbjct: 183 RELRRELYGR 192
>gi|66811624|ref|XP_639991.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466958|gb|EAL65002.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 471
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 98/129 (75%), Gaps = 3/129 (2%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L ++Q+HF++FYED++E L KYG+++ LN+C NL DH+VGNVYV++++E+ A ++K
Sbjct: 71 LSDAELQQHFDEFYEDIYEGLAKYGQVDLLNVCANLGDHLVGNVYVKYQKEDDANESIKG 130
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
L GRFY GRPII +FSPVTDF EA CRQY+ TCNRGG+CNFMHL S+ L +LFG
Sbjct: 131 LKGRFYDGRPIISEFSPVTDFTEARCRQYDIGTCNRGGFCNFMHLHNPSKSLYYKLFG-- 188
Query: 139 RRRHSRSRS 147
R SRS S
Sbjct: 189 -DRKSRSPS 196
>gi|281203736|gb|EFA77932.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 439
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 99/135 (73%), Gaps = 8/135 (5%)
Query: 18 PLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALK 77
P +IQ+HF+DFYED+ E L+KYG+IE L++C NL DH++GN+YV++ E+ AA A++
Sbjct: 67 PASEEEIQKHFDDFYEDIHEGLSKYGKIELLHVCANLGDHLIGNLYVKYSTEDAAAAAIE 126
Query: 78 SLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
L GRFY GRPI+ +FSPVTDF E+ CRQ++ TC+RGG+CNFMHL SR+L +LFG
Sbjct: 127 GLKGRFYDGRPIVAEFSPVTDFNESRCRQFDLGTCDRGGFCNFMHLHNPSRELSVRLFGE 186
Query: 138 YRRRHSRSRSRSRSP 152
R+ SRSP
Sbjct: 187 --------RAASRSP 193
>gi|33086652|gb|AAP92638.1| Cb2-806 [Rattus norvegicus]
Length = 254
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 113/174 (64%), Gaps = 28/174 (16%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+
Sbjct: 107 EVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNN 166
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+LRRQL+GR
Sbjct: 167 RWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGR---- 222
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
R RSP RSH+GH R+R SP HR GR
Sbjct: 223 ----GPRHRSP-------PRSHTGH------------RPRERNRRRSPDHRHGR 253
>gi|4204470|gb|AAD13394.1| splicing factor U2AF35 [Takifugu rubripes]
Length = 211
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 12 VDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEE 70
D + ++QEHF++F+E++F E+ KYGE+E +NICDNL DH+VGNVYV+FR EE
Sbjct: 62 ADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEE 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+L
Sbjct: 122 DAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 181
Query: 131 RRQLFGRYRR 140
RR+L+GR ++
Sbjct: 182 RRELYGRRKK 191
>gi|47226948|emb|CAG05840.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 12 VDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEE 70
D + ++QEHF++F+E++F E+ KYGE+E +NICDNL DH+VGNVYV+FR EE
Sbjct: 62 ADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEE 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+L
Sbjct: 122 DAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 181
Query: 131 RRQLFGRYRR 140
RR+L+GR ++
Sbjct: 182 RRELYGRRKK 191
>gi|410896558|ref|XP_003961766.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 224
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 12 VDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEE 70
D + ++QEHF++F+E++F E+ KYGE+E +NICDNL DH+VGNVYV+FR EE
Sbjct: 62 ADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEE 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+L
Sbjct: 122 DAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 181
Query: 131 RRQLFGRYRR 140
RR+L+GR ++
Sbjct: 182 RRELYGRRKK 191
>gi|410896556|ref|XP_003961765.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 231
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 12 VDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEE 70
D + ++QEHF++F+E++F E+ KYGE+E +NICDNL DH+VGNVYV+FR EE
Sbjct: 62 ADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEE 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+L
Sbjct: 122 DAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 181
Query: 131 RRQLFGRYRR 140
RR+L+GR ++
Sbjct: 182 RRELYGRRKK 191
>gi|387914810|gb|AFK11014.1| splicing factor U2AF35 [Callorhinchus milii]
gi|392876968|gb|AFM87316.1| U2 small nuclear RNA auxiliary factor 1 [Callorhinchus milii]
gi|392879254|gb|AFM88459.1| splicing factor [Callorhinchus milii]
gi|392880418|gb|AFM89041.1| splicing factor [Callorhinchus milii]
Length = 269
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 108/152 (71%), Gaps = 2/152 (1%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMV 59
+Y+ T D + ++QEH+++F+E++F E+ KYGEIE +N+CDNL DH+V
Sbjct: 51 LYRNPQNCTQTADGFHCAVGDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLV 110
Query: 60 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 119
GNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CN
Sbjct: 111 GNVYVKFRHEEDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCN 170
Query: 120 FMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 151
FMHLK ISR+LRR+L+GR RR+ + SR S
Sbjct: 171 FMHLKPISRELRRELYGR-RRKSQQQGSRVTS 201
>gi|291224089|ref|XP_002732040.1| PREDICTED: U2 small nuclear RNA auxillary factor 1-like
[Saccoglossus kowalevskii]
Length = 244
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 95/115 (82%), Gaps = 1/115 (0%)
Query: 24 IQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+Q+HF+DF+E++F EL+ KYGEIE +N+CDN+ DH+VGNVYV+FR EE A +A+ L+ R
Sbjct: 74 MQKHFDDFFEEVFTELDDKYGEIEEMNVCDNIGDHLVGNVYVKFRNEEDAEKAVNDLNNR 133
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+GR
Sbjct: 134 WFNGQPIRAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGR 188
>gi|156376577|ref|XP_001630436.1| predicted protein [Nematostella vectensis]
gi|156217457|gb|EDO38373.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 97/136 (71%), Gaps = 1/136 (0%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMV 59
MYQ D N + + QEH++ F+ED+F EL KYGEIE +N+CDNL DH+V
Sbjct: 51 MYQNPQSAAQVADGTSNAISDVEAQEHYDRFFEDVFLELEEKYGEIEEMNVCDNLGDHLV 110
Query: 60 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 119
GNVYV+FR EE A +A+ L+ R+Y G+PI + SPVTDFREA CRQYE C RGG+CN
Sbjct: 111 GNVYVKFRYEEDAEKAVNDLNNRWYNGQPIYAELSPVTDFREACCRQYEMGECTRGGFCN 170
Query: 120 FMHLKRISRDLRRQLF 135
FMHL+ ISRD+RR+L+
Sbjct: 171 FMHLRPISRDVRRELY 186
>gi|444513449|gb|ELV10328.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 365
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 98/122 (80%), Gaps = 1/122 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 155 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 214
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+GR R++
Sbjct: 215 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKK 274
Query: 142 HS 143
Sbjct: 275 QC 276
>gi|298714129|emb|CBJ27310.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 467
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 98/129 (75%), Gaps = 2/129 (1%)
Query: 8 ITPGVDAQGNP--LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQ 65
++ + A G+P L +Q+ FEDF+E++++EL+K+GEI +N+CDNL DH++GNVYV+
Sbjct: 115 VSAVMAAGGDPSQLPKDHVQDDFEDFFEEVYQELSKFGEISEMNVCDNLGDHLIGNVYVK 174
Query: 66 FREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
F +EE A ALK L GR+YA RPI+ +FSPVTDFREA CRQ++E TCNRGG CNFMH+K
Sbjct: 175 FLDEEDADSALKGLMGRWYASRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKP 234
Query: 126 ISRDLRRQL 134
+ R + L
Sbjct: 235 VPRLVMSYL 243
>gi|428167701|gb|EKX36656.1| hypothetical protein GUITHDRAFT_78757 [Guillardia theta CCMP2712]
Length = 216
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 95/122 (77%)
Query: 8 ITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFR 67
+ G A D + Q+HF++FYE+++EEL K+G+IE LN+C NL DHM+GNVYV++
Sbjct: 61 MMSGPTAMATAADDKASQDHFDEFYEEVYEELEKFGKIEELNVCANLGDHMIGNVYVKYE 120
Query: 68 EEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS 127
EEEQA +AL +L+GRFYAGR I+ ++SPVTDFRE+ CRQYEE C GG+CNFMH+KR S
Sbjct: 121 EEEQAEKALNALNGRFYAGRLIMAEYSPVTDFRESRCRQYEETQCKYGGHCNFMHIKRPS 180
Query: 128 RD 129
++
Sbjct: 181 KE 182
>gi|25072205|ref|NP_739566.1| splicing factor U2AF 26 kDa subunit [Mus musculus]
gi|56912216|ref|NP_001008775.1| splicing factor U2AF 26 kDa subunit [Rattus norvegicus]
gi|81912059|sp|Q7TP17.1|U2AF4_RAT RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName:
Full=Liver regeneration-related protein LRRG157/LRRG158;
AltName: Full=U2 auxiliary factor 26; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|81913106|sp|Q8BGJ9.1|U2AF4_MOUSE RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4
gi|24637023|gb|AAN63524.1|AF419339_1 U2 auxiliary factor 26 [Mus musculus]
gi|24637025|gb|AAN63525.1| U2 auxiliary factor 26 [Mus musculus]
gi|33086654|gb|AAP92639.1| Cb2-807 [Rattus norvegicus]
gi|38511878|gb|AAH60972.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|74145330|dbj|BAE36125.1| unnamed protein product [Mus musculus]
gi|148692061|gb|EDL24008.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|149056309|gb|EDM07740.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_d
[Rattus norvegicus]
Length = 220
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 113/174 (64%), Gaps = 28/174 (16%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+
Sbjct: 73 EVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+LRRQL+GR
Sbjct: 133 RWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGR---- 188
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
R RSP RSH+GH R+R SP HR GR
Sbjct: 189 ----GPRHRSP-------PRSHTGH------------RPRERNRRRSPDHRHGR 219
>gi|260831488|ref|XP_002610691.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
gi|229296058|gb|EEN66701.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
Length = 197
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
Query: 14 AQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQA 72
+ N + ++QEH+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A
Sbjct: 65 SHCNNISDVEMQEHYDNFFEEVFTELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDA 124
Query: 73 ARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR 132
+A+K L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR
Sbjct: 125 EKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRR 184
Query: 133 QLFG 136
+L+G
Sbjct: 185 ELYG 188
>gi|390354481|ref|XP_789191.3| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Strongylocentrotus purpuratus]
gi|390354483|ref|XP_003728344.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Strongylocentrotus purpuratus]
Length = 241
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 110/143 (76%), Gaps = 2/143 (1%)
Query: 11 GVDAQGNPLDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREE 69
G+ Q N L ++Q+HF+DF+E++F E+ KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 69 GIADQSN-LSDVEVQQHFDDFFEEVFAEMEQKYGEIEEMNVCDNLGDHLVGNVYVKFRYE 127
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A +A++ L+ R++ +PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+
Sbjct: 128 EDAEKAVEDLNNRWFNRQPIRAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 187
Query: 130 LRRQLFGRYRRRHSRSRSRSRSP 152
LRR+L+GR +R+ SRS+S SP
Sbjct: 188 LRRELYGRRKRKKRSSRSKSTSP 210
>gi|355727234|gb|AES09127.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mustela putorius
furo]
Length = 168
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 109/167 (65%), Gaps = 16/167 (9%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMV 59
+YQ D + ++QEH+++F+E++F EL KYGEIE +N+CDNL DH+V
Sbjct: 16 LYQNPQNTAQTADGSHCHVSDEEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLV 75
Query: 60 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 119
GNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+CN
Sbjct: 76 GNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCN 135
Query: 120 FMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGH 166
FMHL+ ISR+L+RQL+GR R RSP RSH+GH
Sbjct: 136 FMHLRPISRNLQRQLYGR--------GPRHRSP-------PRSHTGH 167
>gi|328770702|gb|EGF80743.1| hypothetical protein BATDEDRAFT_11284 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 105/162 (64%), Gaps = 11/162 (6%)
Query: 16 GNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
G + P +IQE+F+ +EDLF EL KYGE+E +NICDN+ DH++GNVY +F+ EE A A
Sbjct: 60 GCTMTPDEIQENFDLLFEDLFMELAKYGELEDMNICDNVGDHLIGNVYARFKYEEDAGNA 119
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
++SL+ RFYAGRP+ + SPVTDF EA CRQYE C RGG+CNFMH+K+ S+ + + ++
Sbjct: 120 VESLNNRFYAGRPLYAELSPVTDFGEACCRQYELGECTRGGFCNFMHIKKPSKAMIKDMY 179
Query: 136 GRYRRR-----------HSRSRSRSRSPYRHRSHEDRSHSGH 166
R RSRS SR YR R E R G+
Sbjct: 180 KAQRLSIKILKPRGDEDDGRSRSHSRERYRDRPREGRERDGY 221
>gi|281352323|gb|EFB27907.1| hypothetical protein PANDA_021410 [Ailuropoda melanoleuca]
Length = 178
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 59 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 118
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+GR R++
Sbjct: 119 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKK 178
>gi|149286928|gb|ABR23363.1| U2 snRNP splicing factor small subunit [Ornithodoros parkeri]
Length = 268
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 99/137 (72%), Gaps = 14/137 (10%)
Query: 19 LDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALK 77
+ ++QEHF++F+ED+F EL +KYGEIE +N+CDNL DH+VGNVYV+FR EE A +A+
Sbjct: 70 MTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVA 129
Query: 78 SLSGRFYAGRPIIVDFSPVTDFREATCRQYEENT-------------CNRGGYCNFMHLK 124
L+ R++AG PI + SPVTDFREA CRQYE C R G+CNFMHLK
Sbjct: 130 DLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRGKTASEECTRSGFCNFMHLK 189
Query: 125 RISRDLRRQLFGRYRRR 141
ISR+LRR+L+GR RR+
Sbjct: 190 PISRELRRELYGRKRRK 206
>gi|311334534|emb|CBN08648.1| U2 small nuclear RNA auxiliary factor 1 [Microcosmus squamiger]
Length = 206
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F EL +KYG+IE +N+CDNL DH+VGNVY++F +EE A +A+ L+
Sbjct: 65 EMQEHYDEFFEEVFTELEDKYGDIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKAVNDLNN 124
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRDLRR+L+GR + +
Sbjct: 125 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRDLRRKLYGRRKEK 184
>gi|405969065|gb|EKC34075.1| Splicing factor U2AF 26 kDa subunit [Crassostrea gigas]
Length = 269
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 96/120 (80%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARAL 76
+ +D ++Q+ +++F+E+++ EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A +A+
Sbjct: 91 DKMDDTELQQFYDEFFEEVYVELEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAV 150
Query: 77 KSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 136
L+ R++ GRP+ + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+G
Sbjct: 151 NELNNRWFNGRPVHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 210
>gi|390478246|ref|XP_002761504.2| PREDICTED: uncharacterized protein LOC100415206 [Callithrix
jacchus]
Length = 933
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 766 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 825
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 826 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 879
>gi|302815930|ref|XP_002989645.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
gi|300142616|gb|EFJ09315.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
Length = 217
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ + ITPG + + ++Q+ + FYED+F+E++K+G++E+L IC+N +H+ G
Sbjct: 50 MYQSPE-ITPGQAYRNTAISKEELQKDLDAFYEDVFKEVSKHGKVEALKICNNFGNHLAG 108
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQFR EE A A+ +L+GRFY+GRPI +FSPVTDFREA+CRQ E+ C+RGG CNF
Sbjct: 109 NVYVQFRHEEHAVAAMAALNGRFYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCCNF 168
Query: 121 MHLKRISRDLRRQLFG 136
+HL SR L R+L G
Sbjct: 169 LHLYHPSRALMRELMG 184
>gi|348537122|ref|XP_003456044.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 227
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
DA + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 63 DASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRHEED 122
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LR
Sbjct: 123 AEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 182
Query: 132 RQLFG 136
R+L+G
Sbjct: 183 RELYG 187
>gi|431918574|gb|ELK17792.1| Splicing factor U2AF 26 kDa subunit [Pteropus alecto]
Length = 223
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 111/174 (63%), Gaps = 28/174 (16%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+
Sbjct: 76 EVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNN 135
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+LRRQL+G +
Sbjct: 136 RWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYG----Q 191
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
+ RS RS HR E R+R SP HR GR
Sbjct: 192 GPKHRSPPRSQTHHRPQE-----------------------RNRRRSPDHRHGR 222
>gi|29126228|ref|NP_803432.1| splicing factor U2AF 35 kDa subunit [Danio rerio]
gi|21105405|gb|AAM34646.1|AF506202_1 U2 small nuclear RNA auxiliary factor small subunit [Danio rerio]
Length = 249
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 97/121 (80%), Gaps = 1/121 (0%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
N + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A
Sbjct: 66 NAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 125
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ +L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 126 VINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
Query: 136 G 136
G
Sbjct: 186 G 186
>gi|384494564|gb|EIE85055.1| hypothetical protein RO3G_09765 [Rhizopus delemar RA 99-880]
Length = 243
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 92/117 (78%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L ++QE+F+ FYED+F EL K+GE+E + +CDN+ DH+VGNVY Q+R EE A A++S
Sbjct: 63 LTESQLQENFDLFYEDVFMELAKFGEVEDMVVCDNVGDHLVGNVYCQYRLEESAGNAVES 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
L+ RFYAGRP+ + SPVTDFREA CRQ+E CNRGG+CNFMHLK +R +RR+L+
Sbjct: 123 LNNRFYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFCNFMHLKHPTRTMRRELY 179
>gi|47220971|emb|CAF98200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
DA + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 63 DASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 122
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LR
Sbjct: 123 AEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 182
Query: 132 RQLFG 136
R+L+G
Sbjct: 183 RELYG 187
>gi|290461985|gb|ADD24040.1| Splicing factor U2af 38 kDa subunit [Lepeophtheirus salmonis]
Length = 239
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Query: 19 LDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALK 77
+ R++QEH+++F+ED F E +KYGE+E +N+CDNL DH+VGNVY++FR EE A RA+
Sbjct: 70 VSDREMQEHYDNFFEDCFVEAEDKYGEVEEMNVCDNLGDHLVGNVYIKFRREEDAERAVS 129
Query: 78 SLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
L+ R++ GRPI + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 130 DLNNRWFGGRPIYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRDLY 187
>gi|156098591|ref|XP_001615311.1| U2 snRNP auxiliary factor, small subunit [Plasmodium vivax Sal-1]
gi|148804185|gb|EDL45584.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
vivax]
Length = 316
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 120/198 (60%), Gaps = 7/198 (3%)
Query: 39 LNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTD 98
L KYGEIE + +CDN+ DH++GNVY+++ E+ A +A+K L+GRFYAG+P+ ++++PVTD
Sbjct: 90 LMKYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTD 149
Query: 99 FREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPY----- 153
FREA CRQ+ + C RGGYCNFMH+K + R ++R+L+ R ++ + R ++
Sbjct: 150 FREARCRQFVDGQCRRGGYCNFMHIKHVPRAVKRKLYKRMYKKFPEYKKRRKTKDGSEDG 209
Query: 154 RHRSHEDRSHSGHGRR--YDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREG 211
H SH DR RR Y D R+R + RR+ P RE
Sbjct: 210 YHDSHRDRGSRDKHRRDKYGDSHHSSRRRNRSRSRSRNRDDADGDSDGASRRHKHPRREN 269
Query: 212 SEERRAKIEQWNREREQQ 229
S ERR KIE+WN+ERE +
Sbjct: 270 SAERREKIERWNKEREMK 287
>gi|148677752|gb|EDL09699.1| mCG12604 [Mus musculus]
Length = 212
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 94/115 (81%), Gaps = 1/115 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 44 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAMIDLNN 103
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 136
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+G
Sbjct: 104 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 158
>gi|126329169|ref|XP_001363961.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Monodelphis domestica]
Length = 222
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 111/174 (63%), Gaps = 26/174 (14%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH++ F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+
Sbjct: 73 EVQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVTELNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISRDLRRQL+GR RR
Sbjct: 133 RWFNGQAVQAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLYGRGPRR 192
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
R SP R+ GH R+R SP HR GR
Sbjct: 193 ------RGPSP-------TRAGGGH------------RPRERNRRRSPDHRHGR 221
>gi|403348419|gb|EJY73647.1| U2 snRNP auxiliary factor, small subunit, putative [Oxytricha
trifallax]
Length = 386
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 90/124 (72%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
HFEDF+E++F EL K+GE+E + + DN+ DHM+GNVYV+F EEQA A L+GR+YAG
Sbjct: 78 HFEDFFEEVFGELAKFGELEEVIVADNIGDHMIGNVYVKFVTEEQAQSAFNGLNGRYYAG 137
Query: 87 RPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSR 146
R I+ ++SPVTDFRE+ CRQY E C+RGGYCNFMH K +S+DL+R LF H R
Sbjct: 138 RVILAEYSPVTDFRESKCRQYNEGQCDRGGYCNFMHPKHVSKDLKRALFKSMYDEHPEYR 197
Query: 147 SRSR 150
R
Sbjct: 198 EHRR 201
>gi|384486958|gb|EIE79138.1| hypothetical protein RO3G_03843 [Rhizopus delemar RA 99-880]
Length = 230
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/117 (59%), Positives = 91/117 (77%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L ++QE F+ FYED+F EL K+GE+E + +CDN+ DH+VGNVY QFR EE A A++S
Sbjct: 63 LTENQLQEDFDLFYEDVFMELAKFGEVEEMVVCDNVGDHLVGNVYCQFRLEESAGNAVES 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
L+ RFYAGRP+ + SPVTDFREA CRQ+E CNRGG+CNFMHLK +R LR++L+
Sbjct: 123 LNNRFYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFCNFMHLKHPTRALRQELY 179
>gi|332020538|gb|EGI60953.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA+ L+
Sbjct: 75 EMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRDLRR L+
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRDLRRYLY 188
>gi|348530872|ref|XP_003452934.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 238
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 12 VDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEE 70
VD + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR+EE
Sbjct: 62 VDGLTCTISDTEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKEE 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+L
Sbjct: 122 DAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEIGECTRGGFCNFMHLKPISREL 181
Query: 131 RRQLF 135
RR+L+
Sbjct: 182 RRELY 186
>gi|148223762|ref|NP_001089860.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus laevis]
gi|80477616|gb|AAI08559.1| MGC131026 protein [Xenopus laevis]
Length = 245
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGEIE +N+CDNL DH+VGNVYV+FR EE A +A+K L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|395752868|ref|XP_002830790.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2, partial
[Pongo abelii]
Length = 323
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 156 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 215
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 216 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 269
>gi|351700683|gb|EHB03602.1| Splicing factor U2AF 35 kDa subunit [Heterocephalus glaber]
Length = 387
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 233 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 292
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 293 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 346
>gi|138519996|gb|AAI35291.1| LOC733934 protein [Xenopus (Silurana) tropicalis]
Length = 241
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+K L+
Sbjct: 72 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNN 131
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 132 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|113931334|ref|NP_001039113.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
gi|89268927|emb|CAJ81820.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+K L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|432849900|ref|XP_004066668.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 228
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 96/124 (77%), Gaps = 1/124 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
DA + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 63 DASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 122
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LR
Sbjct: 123 AEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 182
Query: 132 RQLF 135
R+L+
Sbjct: 183 RELY 186
>gi|452820320|gb|EME27364.1| splicing factor U2AF 35 kDa subunit [Galdieria sulphuraria]
Length = 285
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 98/124 (79%)
Query: 12 VDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
V A+ + I+ HF+DFYED+++EL+KYGEIE +++C+N+++H+ GNVY++F++E+
Sbjct: 65 VGAKPPEMSEEDIKYHFDDFYEDVYDELSKYGEIEEMHVCENMSEHLTGNVYIKFKDEDA 124
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A RAL++++GR+YAGR + +FSPVTDFREA CR YE C+RG YCNFMH+KRIS DL
Sbjct: 125 AQRALQAVNGRYYAGRMVHAEFSPVTDFREARCRPYERQLCDRGDYCNFMHIKRISDDLF 184
Query: 132 RQLF 135
LF
Sbjct: 185 NGLF 188
>gi|237839493|ref|XP_002369044.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|211966708|gb|EEB01904.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|221483313|gb|EEE21632.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii GT1]
gi|221507801|gb|EEE33388.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii VEG]
Length = 254
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 121/224 (54%), Gaps = 36/224 (16%)
Query: 8 ITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFR 67
I G + LD + +HFE F+ ++FEEL KYGE+E + +CDN+ DH++GNVYV++
Sbjct: 61 IAEGQNVSDELLD--QAADHFEAFFSEVFEELAKYGEVEDMVVCDNIGDHIIGNVYVKYT 118
Query: 68 EEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS 127
+EE A +AL +L GRFY+G+ I +F+PVTDFREA CRQ+ + C RGGYCNFMHLK +
Sbjct: 119 DEEAANKALAALQGRFYSGKQIHAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVP 178
Query: 128 RDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKY---YESRSRRH 184
R L+R+LF + +DD Y RR
Sbjct: 179 RSLKRKLFKKM-------------------------------FDDHPDYGRQRSPGRRRS 207
Query: 185 RSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQ 228
RS S R P R SEERRA I +WN ERE+
Sbjct: 208 RSRQRSSSPRRPTRRRSPSIQRPERRTSEERRAMIAKWNEEREE 251
>gi|71051663|gb|AAH98601.1| U2af1 protein [Danio rerio]
Length = 250
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 97/121 (80%), Gaps = 1/121 (0%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
N + +++EH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A
Sbjct: 66 NAVSDVEMREHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 125
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ +L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 126 VINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
Query: 136 G 136
G
Sbjct: 186 G 186
>gi|219126548|ref|XP_002183517.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405273|gb|EEC45217.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 251
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 110/159 (69%), Gaps = 9/159 (5%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
+DPR+ QE F F+EDL+ E +K+G IE +++ DNL DHM+G+VYV+F +EEQA+ AL+
Sbjct: 71 VDPRQAQEDFFAFFEDLYVEFSKFGRIEGMHVVDNLGDHMIGHVYVKFADEEQASDALQV 130
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
++GR+Y GRP+I++FSPVTDFREA CR Y+E+ C R GYCNF+H K + R L + L
Sbjct: 131 MNGRYYDGRPMIIEFSPVTDFREARCRDYDEDQCARQGYCNFLHSKPVPRALLQSLEDDC 190
Query: 135 ----FGRYRRRHSRSRSRSRSPYRHRSH-EDRSHSGHGR 168
RR +++ + +R RSH EDRS+ HGR
Sbjct: 191 EADRIAEKERRRRDRKTQKKRKHRDRSHSEDRSYRKHGR 229
>gi|328785395|ref|XP_397281.4| PREDICTED: splicing factor U2af 38 kDa subunit [Apis mellifera]
gi|340723033|ref|XP_003399903.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
terrestris]
gi|350423714|ref|XP_003493568.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
impatiens]
gi|380029135|ref|XP_003698237.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Apis florea]
gi|383858860|ref|XP_003704917.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Megachile
rotundata]
Length = 241
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA+ L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|355727231|gb|AES09126.1| U2 small nuclear RNA auxiliary factor 1 [Mustela putorius furo]
Length = 133
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 94/115 (81%), Gaps = 1/115 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 6 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 65
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 136
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+G
Sbjct: 66 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 120
>gi|307202736|gb|EFN82027.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA+ L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|66361760|ref|XP_627402.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
gi|46228867|gb|EAK89737.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
Length = 256
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 112/200 (56%), Gaps = 34/200 (17%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
E FYE++F+EL+KYGEI L ICDN+ DHM+GNVY++F EE A AL +L G+ YAG+
Sbjct: 86 VEVFYEEMFKELSKYGEILELLICDNIGDHMIGNVYIRFSTEEYAKTALANLRGKMYAGK 145
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 147
PI ++ SPV+DF+EA CRQY + CNRGGYCNFMH+K + R ++ ++F + H
Sbjct: 146 PINIELSPVSDFKEARCRQYIDGCCNRGGYCNFMHIKHVPRCVKDKIFDQMYSEHPE--- 202
Query: 148 RSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP 207
Y HR + G DD SR R+ +
Sbjct: 203 -----YLHRK---TNSCGKSSARDDGKGSESSRPRKFQ---------------------- 232
Query: 208 VREGSEERRAKIEQWNRERE 227
R+ SEERR IE WN+ RE
Sbjct: 233 -RQSSEERRLMIESWNKRRE 251
>gi|301791706|ref|XP_002930821.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 290
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 123 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 182
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 183 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 236
>gi|307170197|gb|EFN62583.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|332029584|gb|EGI69473.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA+ L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|91089827|ref|XP_969424.1| PREDICTED: similar to AGAP002956-PA [Tribolium castaneum]
Length = 227
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA+ L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|307197303|gb|EFN78595.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA+ L+
Sbjct: 75 EMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|67624011|ref|XP_668288.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis
TU502]
gi|54659468|gb|EAL38043.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis]
Length = 247
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 112/200 (56%), Gaps = 34/200 (17%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
E FYE++F+EL+KYGEI L ICDN+ DHM+GNVY++F EE A AL +L G+ YAG+
Sbjct: 79 VEVFYEEIFKELSKYGEILELLICDNIGDHMIGNVYIRFSTEEYAKTALLNLRGKLYAGK 138
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 147
PI ++ SPV+DF+EA CRQY + CNRGGYCNFMH+K + R ++ ++F + H
Sbjct: 139 PINIELSPVSDFKEARCRQYIDGCCNRGGYCNFMHIKHVPRCVKDKIFDQMYSEHPE--- 195
Query: 148 RSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP 207
Y HR + G DD SR R+ +
Sbjct: 196 -----YLHRK---TNSCGKSSARDDGKGSESSRPRKFQ---------------------- 225
Query: 208 VREGSEERRAKIEQWNRERE 227
R+ SEERR IE WN+ RE
Sbjct: 226 -RQSSEERRLMIESWNKRRE 244
>gi|221056112|ref|XP_002259194.1| U2 snRNP auxiliary factor, small subunit [Plasmodium knowlesi
strain H]
gi|193809265|emb|CAQ39967.1| U2 snRNP auxiliary factor, small subunit,putative [Plasmodium
knowlesi strain H]
Length = 308
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 124/205 (60%), Gaps = 21/205 (10%)
Query: 39 LNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTD 98
L KYGEIE + +CDN+ DH++GNVY+++ E+ A +A+K L+GRFYAG+P+ ++++PVTD
Sbjct: 90 LMKYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTD 149
Query: 99 FREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSH 158
FREA CRQ+ + C RGGYCNFMH+K + R ++R+L+ R ++ + R ++
Sbjct: 150 FREARCRQFVDGQCRRGGYCNFMHIKHVPRSVKRKLYKRMYKKFPEYKKRRKT------- 202
Query: 159 EDRSHSGHGRRYDD--------RDKYYES------RSRRHRSTSPSHRRGRSRSPGGRRY 204
+D S GH + D RDKY +S R+R + RR+
Sbjct: 203 KDGSEDGHYDSHRDRGTRDKHRRDKYGDSYHSSRRRNRSRSRSRNRDDADGDSDGASRRH 262
Query: 205 HSPVREGSEERRAKIEQWNREREQQ 229
P RE S ERR KIE+WN+ERE +
Sbjct: 263 KYPRRENSAERREKIERWNKEREMK 287
>gi|357618954|gb|EHJ71738.1| putative U2 snrnp auxiliary factor, small subunit [Danaus
plexippus]
Length = 227
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A +A+ L+
Sbjct: 76 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 135
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 136
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 136 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYA 190
>gi|389583734|dbj|GAB66468.1| U2 snRNP auxiliary factor small subunit, partial [Plasmodium
cynomolgi strain B]
Length = 307
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 123/206 (59%), Gaps = 19/206 (9%)
Query: 39 LNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTD 98
L KYGEIE + +CDN+ DH++GNVY+++ E+ A +A+K L+GRFYAG+P+ ++++PVTD
Sbjct: 90 LMKYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTD 149
Query: 99 FREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPY----- 153
FREA CRQ+ + C RGGYCNFMH+K + R ++R+L+ R ++ + R ++
Sbjct: 150 FREARCRQFVDGQCRRGGYCNFMHIKHVPRAVKRKLYKRMYKKFPEYKKRRKTKDGSEDG 209
Query: 154 RHRSHEDRSHSGHGRRYDDRDKYYES----------RSRRHRSTSPSHRRGRSRSPGGRR 203
H SH DR R RDKY +S RSR + RR
Sbjct: 210 HHDSHRDRGSRDKHR----RDKYGDSHHSSRRRNRSRSRSRNRSRNRDDADGDSDGASRR 265
Query: 204 YHSPVREGSEERRAKIEQWNREREQQ 229
+ P RE S ERR KIE+WN+ERE +
Sbjct: 266 HKHPRRENSAERREKIERWNKEREMK 291
>gi|345323475|ref|XP_001511817.2| PREDICTED: hypothetical protein LOC100080963 [Ornithorhynchus
anatinus]
Length = 350
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 175 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 234
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 235 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 288
>gi|426219497|ref|XP_004003958.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Ovis aries]
Length = 332
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 155 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 214
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 215 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 268
>gi|307172750|gb|EFN64036.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|307174220|gb|EFN64865.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
Length = 240
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A +A+ L+
Sbjct: 75 EMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|380807533|gb|AFE75642.1| splicing factor U2AF 35 kDa subunit isoform b, partial [Macaca
mulatta]
Length = 192
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 37 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 96
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 97 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 150
>gi|71027337|ref|XP_763312.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small subunit
[Theileria parva strain Muguga]
gi|68350265|gb|EAN31029.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Theileria parva]
Length = 235
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 106/189 (56%), Gaps = 47/189 (24%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE + +CDN+ DH++GNVY+++ +E A RA+ SLSGR+Y GRPI +++PVTDFR
Sbjct: 92 KYGEIEDMIVCDNIGDHIIGNVYIKYSDEAAACRAVTSLSGRYYGGRPIQCEYTPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHED 160
EA CRQ+ E C RGGYCNFMH+K + R LRR+L R +
Sbjct: 152 EARCRQFVEGQCRRGGYCNFMHIKHVPRSLRRKLMTRMYQEFPE---------------- 195
Query: 161 RSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIE 220
Y+ R+ RHRS SP R+ R+ SEERR IE
Sbjct: 196 ----------------YKKRTPRHRSASPYRRK---------------RQTSEERRDMIE 224
Query: 221 QWNREREQQ 229
QWNRERE +
Sbjct: 225 QWNRERESK 233
>gi|332263383|ref|XP_003280726.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Nomascus
leucogenys]
gi|332872231|ref|XP_003319153.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Pan
troglodytes]
gi|397506809|ref|XP_003823909.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
paniscus]
Length = 202
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 35 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 94
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 95 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 148
>gi|77736499|ref|NP_001029950.1| splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|426242747|ref|XP_004015232.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Ovis
aries]
gi|122146166|sp|Q3T127.1|U2AF4_BOVIN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|74354897|gb|AAI02152.1| Transmembrane protein 149 [Bos taurus]
gi|296477857|tpg|DAA19972.1| TPA: splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|440894920|gb|ELR47238.1| Splicing factor U2AF 26 kDa subunit [Bos grunniens mutus]
Length = 220
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+
Sbjct: 73 EVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVVELNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISRDLRRQL+
Sbjct: 133 RWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLY 186
>gi|432116144|gb|ELK37266.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 244
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 77 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 136
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 137 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 190
>gi|354484665|ref|XP_003504507.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Cricetulus
griseus]
Length = 238
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 72 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 131
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 132 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|196016447|ref|XP_002118076.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
gi|190579379|gb|EDV19476.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
Length = 183
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q+HF+ +YED+F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A+ A+ SL+ R+
Sbjct: 76 QKHFDHYYEDIFVELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRSEEHASAAVNSLNNRW 135
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
+ G PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR LR
Sbjct: 136 FNGNPIFAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRSLR 183
>gi|197127859|gb|ACH44357.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127861|gb|ACH44359.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 95/124 (76%), Gaps = 1/124 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
D + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 63 DGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 122
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LR
Sbjct: 123 AEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 182
Query: 132 RQLF 135
R+L+
Sbjct: 183 RELY 186
>gi|68800128|ref|NP_001020374.1| splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]
gi|297287452|ref|XP_002803161.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Macaca mulatta]
gi|332872227|ref|XP_003319151.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
troglodytes]
gi|344294749|ref|XP_003419078.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Loxodonta africana]
gi|359323574|ref|XP_003640135.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|402862238|ref|XP_003895473.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Papio
anubis]
gi|46911414|emb|CAF29556.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|119629907|gb|EAX09502.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_b [Homo
sapiens]
gi|410206762|gb|JAA00600.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289262|gb|JAA23231.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 95/124 (76%), Gaps = 1/124 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
D + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 63 DGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 122
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LR
Sbjct: 123 AEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 182
Query: 132 RQLF 135
R+L+
Sbjct: 183 RELY 186
>gi|327268484|ref|XP_003219027.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 242
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 95/124 (76%), Gaps = 1/124 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
D + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 63 DGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 122
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LR
Sbjct: 123 AEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 182
Query: 132 RQLF 135
R+L+
Sbjct: 183 RELY 186
>gi|254939700|ref|NP_001157241.1| splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]
gi|348556405|ref|XP_003464013.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Cavia porcellus]
gi|148708397|gb|EDL40344.1| mCG14259, isoform CRA_b [Mus musculus]
gi|149043574|gb|EDL97025.1| rCG60540, isoform CRA_b [Rattus norvegicus]
Length = 239
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 95/124 (76%), Gaps = 1/124 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
D + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 63 DGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 122
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LR
Sbjct: 123 AEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 182
Query: 132 RQLF 135
R+L+
Sbjct: 183 RELY 186
>gi|126325215|ref|XP_001364583.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Monodelphis
domestica]
gi|395518569|ref|XP_003763432.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2
[Sarcophilus harrisii]
Length = 248
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 95/124 (76%), Gaps = 1/124 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
D + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 63 DGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 122
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LR
Sbjct: 123 AEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 182
Query: 132 RQLF 135
R+L+
Sbjct: 183 RELY 186
>gi|12805423|gb|AAH02184.1| U2af1 protein, partial [Mus musculus]
Length = 238
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 72 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 131
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 132 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|112983840|ref|NP_001037756.1| uncharacterized protein LOC687575 [Rattus norvegicus]
gi|254939694|ref|NP_077149.2| splicing factor U2AF 35 kDa subunit isoform 1 [Mus musculus]
gi|348556403|ref|XP_003464012.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Cavia porcellus]
gi|17368837|sp|Q9D883.4|U2AF1_MOUSE RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|12849864|dbj|BAB28511.1| unnamed protein product [Mus musculus]
gi|26354106|dbj|BAC40683.1| unnamed protein product [Mus musculus]
gi|74181282|dbj|BAE29923.1| unnamed protein product [Mus musculus]
gi|76779398|gb|AAI05906.1| Similar to Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor
35 kDa subunit) (U2 snRNP auxiliary factor small
subunit) [Rattus norvegicus]
gi|109730851|gb|AAI15480.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|109732120|gb|AAI15481.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|148708396|gb|EDL40343.1| mCG14259, isoform CRA_a [Mus musculus]
gi|149043573|gb|EDL97024.1| rCG60540, isoform CRA_a [Rattus norvegicus]
Length = 239
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|395518567|ref|XP_003763431.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1
[Sarcophilus harrisii]
Length = 248
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|327268486|ref|XP_003219028.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Anolis carolinensis]
Length = 236
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|327268482|ref|XP_003219026.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 242
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|122692549|ref|NP_001073737.1| splicing factor U2AF 35 kDa subunit [Bos taurus]
gi|122703746|ref|NP_989986.2| splicing factor U2AF 35 kDa subunit [Gallus gallus]
gi|146325808|sp|A1A4K8.1|U2AF1_BOVIN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|13235096|emb|CAC33541.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235098|emb|CAC33542.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235100|emb|CAC33543.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|119223947|gb|AAI26639.1| U2 small nuclear RNA auxiliary factor 1 [Bos taurus]
gi|296490881|tpg|DAA32994.1| TPA: splicing factor U2AF 35 kDa subunit [Bos taurus]
Length = 237
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|5803207|ref|NP_006749.1| splicing factor U2AF 35 kDa subunit isoform a [Homo sapiens]
gi|297287450|ref|XP_001118538.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Macaca mulatta]
gi|332872225|ref|XP_001137466.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
troglodytes]
gi|344294747|ref|XP_003419077.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Loxodonta africana]
gi|359323572|ref|XP_003640134.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Canis
lupus familiaris]
gi|402862236|ref|XP_003895472.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Papio
anubis]
gi|410060371|ref|XP_003949235.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Pan troglodytes]
gi|267187|sp|Q01081.3|U2AF1_HUMAN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 small
nuclear RNA auxiliary factor 1; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|338263|gb|AAA36619.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|7768747|dbj|BAA95534.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|12654677|gb|AAH01177.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|12804941|gb|AAH01923.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|119629911|gb|EAX09506.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_d [Homo
sapiens]
gi|261861084|dbj|BAI47064.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
gi|410206760|gb|JAA00599.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289260|gb|JAA23230.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410331625|gb|JAA34759.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|326432262|gb|EGD77832.1| splicing factor U2af 38 kDa subunit [Salpingoeca sp. ATCC 50818]
Length = 278
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
Query: 16 GNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
G + ++QE+F++F+ DLF EL KYG I +N+CDNL DH+VGNVY+ F+ EE A +
Sbjct: 67 GCAMTEEELQENFDNFFADLFWELEEKYGPIVDMNVCDNLGDHLVGNVYIMFKNEEDAEK 126
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
A++ L+ R+Y G PI+ + SPVTDF+EA CRQYE C RGG+CNFMHLK +S+ +R L
Sbjct: 127 AVEDLNNRWYNGNPIVAELSPVTDFKEACCRQYELGECTRGGFCNFMHLKPLSKSMRDVL 186
Query: 135 FGRYRRRHS 143
FG RR S
Sbjct: 187 FGDRRREVS 195
>gi|441672642|ref|XP_004092375.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
Length = 213
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 46 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 105
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 106 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 159
>gi|449268664|gb|EMC79513.1| Splicing factor U2AF 35 kDa subunit, partial [Columba livia]
Length = 222
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 95/124 (76%), Gaps = 1/124 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
D + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 49 DGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 108
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LR
Sbjct: 109 AEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 168
Query: 132 RQLF 135
R+L+
Sbjct: 169 RELY 172
>gi|355560252|gb|EHH16938.1| hypothetical protein EGK_13202, partial [Macaca mulatta]
gi|355747336|gb|EHH51833.1| hypothetical protein EGM_12135, partial [Macaca fascicularis]
Length = 226
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 95/124 (76%), Gaps = 1/124 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
D + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 49 DGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 108
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LR
Sbjct: 109 AEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 168
Query: 132 RQLF 135
R+L+
Sbjct: 169 RELY 172
>gi|328875135|gb|EGG23500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 447
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 89/114 (78%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+IQ+HF++FYEDL E L+KYG +E +++C NL DH++GNVYV++ EE A A++ L GR
Sbjct: 90 EIQKHFDEFYEDLHEGLSKYGRVELMHVCANLGDHLIGNVYVKYDTEEAAGAAVEGLRGR 149
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 136
FY GRPI+ +FSPVTDF E+ CRQ++ TC+RGGYCNFMHL S+ L +LFG
Sbjct: 150 FYDGRPIVAEFSPVTDFNESRCRQFDMGTCDRGGYCNFMHLHLPSKPLSIKLFG 203
>gi|440895568|gb|ELR47720.1| Splicing factor U2AF 35 kDa subunit, partial [Bos grunniens mutus]
Length = 223
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 59 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 118
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 119 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|431901449|gb|ELK08471.1| Splicing factor U2AF 35 kDa subunit, partial [Pteropus alecto]
Length = 226
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 59 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 118
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 119 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|223646964|gb|ACN10240.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672827|gb|ACN12595.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 227
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 133 RWFNGQPIHAELSPVTDFREAYCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
>gi|1621615|gb|AAB17271.1| U2 snRNP auxiliary factor [Drosophila melanogaster]
Length = 264
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 93/126 (73%), Gaps = 2/126 (1%)
Query: 11 GVDAQGNPLDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREE 69
G D N D ++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E
Sbjct: 64 GSDLVANVSD-EEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNE 122
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 123 ADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
Query: 130 LRRQLF 135
LRR L+
Sbjct: 183 LRRYLY 188
>gi|326913392|ref|XP_003203022.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Meleagris
gallopavo]
Length = 243
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 79 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 138
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 139 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 192
>gi|311257402|ref|XP_003127103.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1 [Sus
scrofa]
Length = 220
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+
Sbjct: 73 EVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+LRRQL+
Sbjct: 133 RWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 186
>gi|380793475|gb|AFE68613.1| splicing factor U2AF 35 kDa subunit isoform a, partial [Macaca
mulatta]
Length = 155
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Query: 24 IQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+ R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|301771073|ref|XP_002920964.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Ailuropoda
melanoleuca]
gi|338709979|ref|XP_003362292.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2
[Equus caballus]
Length = 220
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+
Sbjct: 73 EVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+LRRQL+
Sbjct: 133 RWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 186
>gi|432095948|gb|ELK26863.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 248
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH++ F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDAFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRREL 185
>gi|428672035|gb|EKX72950.1| U2 snrnp auxiliary factor, small subunit, putative [Babesia equi]
Length = 243
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 108/190 (56%), Gaps = 45/190 (23%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE + +CDN+ DH++GNVYV++ +E A+RA+ SLSGR+Y GRPI +++PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYVKYSDESAASRAVTSLSGRYYGGRPIQAEYTPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRS-RSPYRHRSHE 159
EA CRQ+ + C RGGYCNFMH+K I R LRR+L R + + RS RS Y
Sbjct: 152 EARCRQFVDGQCRRGGYCNFMHIKHIPRSLRRKLMKRMYEEYPEYKKRSPRSSY------ 205
Query: 160 DRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKI 219
R+RS SP H P R+ SEERR I
Sbjct: 206 -----------------------RNRSGSP---------------HRPKRQTSEERRDMI 227
Query: 220 EQWNREREQQ 229
QWNRERE +
Sbjct: 228 AQWNREREDK 237
>gi|68800138|ref|NP_001020375.1| splicing factor U2AF 35 kDa subunit isoform c [Homo sapiens]
gi|194226294|ref|XP_001490926.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Equus caballus]
gi|332263381|ref|XP_003280725.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Nomascus
leucogenys]
gi|332872229|ref|XP_003319152.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
troglodytes]
gi|338720813|ref|XP_003364254.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Equus caballus]
gi|345795464|ref|XP_535599.3| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Canis
lupus familiaris]
gi|359323577|ref|XP_003640136.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Canis
lupus familiaris]
gi|397506805|ref|XP_003823907.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
paniscus]
gi|397506807|ref|XP_003823908.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
paniscus]
gi|403271413|ref|XP_003927619.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Saimiri boliviensis
boliviensis]
gi|410969865|ref|XP_003991412.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Felis
catus]
gi|410969867|ref|XP_003991413.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Felis
catus]
gi|441672637|ref|XP_004092374.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
gi|33341702|gb|AAQ15222.1|AF370386_1 FP793 [Homo sapiens]
gi|119629906|gb|EAX09501.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629909|gb|EAX09504.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629910|gb|EAX09505.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
Length = 167
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Query: 24 IQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+ R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|410906167|ref|XP_003966563.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 235
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 101/145 (69%), Gaps = 6/145 (4%)
Query: 12 VDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEE 70
DA + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGN FR EE
Sbjct: 62 ADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRREE 117
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+L
Sbjct: 118 DAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 177
Query: 131 RRQLFGRYRRRHSRSRSRSRSPYRH 155
RR+L+GR RR+ S P RH
Sbjct: 178 RRELYGR-RRKSQSGVSNKIIPIRH 201
>gi|444514071|gb|ELV10521.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 229
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++Q+H+ +F++++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQQHYHEFFQEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVVDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
R++ GRPI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L
Sbjct: 133 RWFHGRPIYAELSPVTDFREACCRQYETGECARGGFCNFMHLKPISRELRREL 185
>gi|223646168|gb|ACN09842.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672015|gb|ACN12189.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 244
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+P+ + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR L+
Sbjct: 133 RWFNGQPVHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRDLY 186
>gi|427787701|gb|JAA59302.1| Putative u2 small nuclear riboprotein auxiliary factor 38
[Rhipicephalus pulchellus]
Length = 253
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 93/127 (73%), Gaps = 14/127 (11%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEHF++F+ED+F EL +KYGEIE +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 74 EMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVADLNN 133
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENT-------------CNRGGYCNFMHLKRISR 128
R++AG PI + SPVTDFREA CRQYE C R G+CNFMHLK ISR
Sbjct: 134 RWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRSTAATEECTRSGFCNFMHLKPISR 193
Query: 129 DLRRQLF 135
+LRR+L+
Sbjct: 194 ELRRELY 200
>gi|241556280|ref|XP_002399674.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
gi|215499705|gb|EEC09199.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
Length = 256
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 93/127 (73%), Gaps = 14/127 (11%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEHF++F+ED+F EL +KYGEIE +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 74 EMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVADLNN 133
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYE-------------ENTCNRGGYCNFMHLKRISR 128
R++AG PI + SPVTDFREA CRQYE C R G+CNFMHLK ISR
Sbjct: 134 RWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRTTEASEECTRSGFCNFMHLKPISR 193
Query: 129 DLRRQLF 135
+LRR+L+
Sbjct: 194 ELRRELY 200
>gi|197692189|dbj|BAG70058.1| U2 small nuclear RNA auxillary factor 1 isoform a [Homo sapiens]
Length = 240
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHL+ ISR+LRR+L+
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLEPISRELRRELY 186
>gi|17137284|ref|NP_477208.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|442624928|ref|NP_001259814.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
gi|14286185|sp|Q94535.2|U2AF1_DROME RecName: Full=Splicing factor U2af 38 kDa subunit; AltName: Full=U2
auxiliary factor 38 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|7296221|gb|AAF51512.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|16197991|gb|AAL13766.1| LD24048p [Drosophila melanogaster]
gi|220947574|gb|ACL86330.1| U2af38-PA [synthetic construct]
gi|440213060|gb|AGB92351.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
Length = 264
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|355755732|gb|EHH59479.1| U2 auxiliary factor 26 [Macaca fascicularis]
Length = 220
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 28/174 (16%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH++ F+E++F EL KYGEIE +N+CD+L DH+VGNVYV+FR EE A RA+ L+
Sbjct: 73 EVQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++L RQL+G+ RR
Sbjct: 133 RWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLWRQLYGQGPRR 192
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
RSP R H+ H R +R + SP HR GR
Sbjct: 193 --------RSP-------PRFHTSHCPREGNRRR------------SPDHRHGR 219
>gi|195470226|ref|XP_002087409.1| GE16227 [Drosophila yakuba]
gi|194173510|gb|EDW87121.1| GE16227 [Drosophila yakuba]
Length = 267
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|195350065|ref|XP_002041562.1| GM16679 [Drosophila sechellia]
gi|195575511|ref|XP_002077621.1| GD22967 [Drosophila simulans]
gi|194123335|gb|EDW45378.1| GM16679 [Drosophila sechellia]
gi|194189630|gb|EDX03206.1| GD22967 [Drosophila simulans]
Length = 263
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|194853379|ref|XP_001968154.1| GG24659 [Drosophila erecta]
gi|190660021|gb|EDV57213.1| GG24659 [Drosophila erecta]
Length = 266
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LRR L+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
>gi|403223158|dbj|BAM41289.1| U2 snRNP auxiliary factor [Theileria orientalis strain Shintoku]
Length = 242
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 107/198 (54%), Gaps = 61/198 (30%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE + +CDN+ DH++GNVY+++ +E A RA+ SLSGR+Y GRPI +++PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYIKYTDESAACRAVTSLSGRYYGGRPIQCEYTPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL-------FGRYRRRHSRS--RSRSRS 151
EA CRQ+ E C RGGYCNFMH+K + R LRR+L F Y+RR R R+RSRS
Sbjct: 152 EARCRQFVEGQCRRGGYCNFMHIKHVPRSLRRKLMKRMYEEFPEYKRRSPRGSHRNRSRS 211
Query: 152 PYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREG 211
P R P R+
Sbjct: 212 PQR----------------------------------------------------PKRQT 219
Query: 212 SEERRAKIEQWNREREQQ 229
SEERR IEQWNRERE +
Sbjct: 220 SEERRDMIEQWNREREAK 237
>gi|312381446|gb|EFR27193.1| hypothetical protein AND_06248 [Anopheles darlingi]
Length = 372
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA K L+
Sbjct: 192 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNN 251
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 252 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 299
>gi|426378574|ref|XP_004055992.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like, partial
[Gorilla gorilla gorilla]
Length = 193
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F EL KYGE+E +N+CDNL DH+VGNVY + EE A +A+ L+
Sbjct: 71 EMQEHYDEFFEEVFIELGEKYGEVEEMNVCDNLGDHLVGNVYFKLPREEDAEKAVIDLNN 130
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+PI + SPVTDFR A CRQYE C RGG+CNFMHLK ISR+LRR+L G+ R++
Sbjct: 131 RWFNGQPIHAELSPVTDFRGACCRQYEMGECTRGGFCNFMHLKPISRELRRELCGQRRKK 190
Query: 142 H 142
H
Sbjct: 191 H 191
>gi|85000529|ref|XP_954983.1| U2 snRNP auxiliary factor [Theileria annulata strain Ankara]
gi|65303129|emb|CAI75507.1| U2 snRNP auxiliary factor, putative [Theileria annulata]
Length = 236
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 105/189 (55%), Gaps = 47/189 (24%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE + +CDN+ DH++GNVY+++ +E A RA+ SLSGR+Y GRPI +++PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYIKYSDESAACRAVTSLSGRYYGGRPIQCEYTPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHED 160
EA CRQ+ E C RGGYCNFMH+K + R LRR+L R + + R PY
Sbjct: 152 EARCRQFVEGQCRRGGYCNFMHIKHVPRSLRRKLMTRMYQEF--PEYKKRIPY------- 202
Query: 161 RSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIE 220
HRS SP R+ R+ SEERR IE
Sbjct: 203 -----------------------HRSGSPYKRK---------------RQTSEERRDMIE 224
Query: 221 QWNREREQQ 229
QWNRERE +
Sbjct: 225 QWNRERESK 233
>gi|422294712|gb|EKU22012.1| splicing factor U2AF 35 kDa subunit, partial [Nannochloropsis
gaditana CCMP526]
Length = 313
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 88/107 (82%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
FEDF+E+++EEL K+GE+E +++CDNL +HM+GNVY ++ +EE+A A ++L+GRFYAGR
Sbjct: 151 FEDFFEEVYEELAKFGEVEGMHVCDNLGEHMIGNVYAKYADEEEADEARQALNGRFYAGR 210
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
+ V+FSPVTDFREA CRQY+E C G YCNF+H+K ISR LRR L
Sbjct: 211 VLEVEFSPVTDFREARCRQYDEGQCTYGPYCNFLHVKTISRALRRDL 257
>gi|340377156|ref|XP_003387096.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Amphimedon
queenslandica]
Length = 227
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
Query: 19 LDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALK 77
+ P Q H+E+F+ED+F E KYG IE +N+CDNL DH+VGNVY++FR EE A +A++
Sbjct: 68 VSPEVEQAHYEEFFEDVFIECEEKYGPIEKMNVCDNLGDHLVGNVYIKFRFEEDAEKAVQ 127
Query: 78 SLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
SL+ R++ G PI + SPVTDF+EA CRQY+ C RGG+CNFMHLK ISR+L+R L+
Sbjct: 128 SLNNRWFNGHPIHAELSPVTDFKEACCRQYDMGECTRGGFCNFMHLKPISRELKRFLY 185
>gi|348683758|gb|EGZ23573.1| hypothetical protein PHYSODRAFT_370516 [Phytophthora sojae]
Length = 203
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 106/136 (77%), Gaps = 4/136 (2%)
Query: 1 MYQRLDMITPGVDAQGNP--LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM 58
MYQ + I + G+P LD R + E FEDFYE++FEEL K+G++E LNICDNL DH+
Sbjct: 50 MYQ--NPIAQVIAQNGDPASLDQRHVDEEFEDFYEEVFEELCKFGKLEELNICDNLGDHL 107
Query: 59 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 118
VGNVY ++ +EE AA A K+L GRFYAGRP++ +FSPVTDFREA CRQ++E TCNRGGYC
Sbjct: 108 VGNVYAKYEDEEHAAAAQKALYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYC 167
Query: 119 NFMHLKRISRDLRRQL 134
NFMH+K + R ++R+L
Sbjct: 168 NFMHIKTVPRSMQREL 183
>gi|239790945|dbj|BAH72001.1| ACYPI001339 [Acyrthosiphon pisum]
Length = 214
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A A+ L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEHAEAAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LR
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELR 184
>gi|449682646|ref|XP_002156010.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Hydra
magnipapillata]
Length = 190
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
QEH+++F+ED+F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A +A+ +++ R+
Sbjct: 29 QEHYDNFFEDVFLELEAKYGEIEEMNVCDNLGDHLVGNVYVKFRFEEDAEKAVDNVNNRW 88
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
Y G+PI + SPVTDFRE+ CRQYE C RGG+CNFMHLK ISR+L
Sbjct: 89 YNGQPIYAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLKPISREL 135
>gi|395751008|ref|XP_003780722.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Pongo abelii]
Length = 179
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F EL KYGE E +N+CDNL DH+VGNVYV+FR EE A RA+ L+
Sbjct: 32 EVQEHYDNFFEEVFTELQEKYGEXEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNN 91
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++LRRQL+
Sbjct: 92 RWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQLY 145
>gi|31455228|gb|AAH05915.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|312151474|gb|ADQ32249.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
Length = 167
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
Query: 24 IQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+QEH+++F+E++F E+ KY E+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+ R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYREVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|403331231|gb|EJY64551.1| U2 splicing factor subunit, putative [Oxytricha trifallax]
Length = 452
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 134/250 (53%), Gaps = 46/250 (18%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
HFE FYE++F EL KYGE+E ++ICDN+ +H++GNVY +F +E A +A++ L+GR+YAG
Sbjct: 65 HFESFYEEVFLELAKYGEVEEMHICDNIGEHLLGNVYCKFIQELDADKAMRGLNGRYYAG 124
Query: 87 RPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISR----DLRRQLFGRYRRRH 142
+ I V+FSPVTDF E+ CR Y E C+RGGYCNFMHLK +++ D++ ++ +
Sbjct: 125 KQIKVEFSPVTDFNESRCRLYVEGQCDRGGYCNFMHLKHMTKEFQHDMKCLMYSEFPEYK 184
Query: 143 SRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHR----------------- 185
+ R R +++S E S+ + + K S+ R+ +
Sbjct: 185 AHRDQRKRVAKQNKSIEPESNKSISKSRSPQPKRSRSKDRKQKRRYNRKSSQSSSRSKSR 244
Query: 186 --STSPSHRRGRSRSPGGRRYHSPV----------------------REGSEERRAKIEQ 221
+TS SH + R R R++H RE S+ERRA I
Sbjct: 245 NSTTSRSHSQDR-RHKSKRKHHRYSRSRSRNERRARNSRKDSRVNLGRETSKERRAIIAA 303
Query: 222 WNREREQQEE 231
WN E + +++
Sbjct: 304 WNDENDDKKQ 313
>gi|170063641|ref|XP_001867190.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167881198|gb|EDS44581.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 249
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA K L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|118781916|ref|XP_311943.3| AGAP002956-PA [Anopheles gambiae str. PEST]
gi|116129321|gb|EAA08115.3| AGAP002956-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA K L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|157114089|ref|XP_001657976.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108877446|gb|EAT41671.1| AAEL006713-PA [Aedes aegypti]
Length = 246
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA K L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|160358766|sp|Q8WU68.2|U2AF4_HUMAN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
protein 3; Short=U2 small nuclear RNA auxiliary factor
1-like protein 3; Short=U2AF1-like protein 3
Length = 220
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 104/147 (70%), Gaps = 1/147 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH++ F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE RA+ LS
Sbjct: 73 EVQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++L+RQL+GR RR
Sbjct: 133 RWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLYGRGPRR 192
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGR 168
S R + R R+H HGR
Sbjct: 193 RSPPRFHTGHHPRERNHRCSPDHWHGR 219
>gi|170035423|ref|XP_001845569.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167877385|gb|EDS40768.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 217
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A RA K L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|449303843|gb|EMC99850.1| hypothetical protein BAUCODRAFT_352847 [Baudoinia compniacensis
UAMH 10762]
Length = 210
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 98/149 (65%), Gaps = 6/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + +D ++Q HF+ FYED++ E+NKYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDTRARSMDASQLQNHFDAFYEDIWCEMNKYGELEELVVCDNNNDHLIGNVYARFKYE 114
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A A ++L+ R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 115 ESAQAASEALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEE 174
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
+ R L + R R R ++S SRS SP
Sbjct: 175 MDRSLELATKKWLRARGRDAKSMSRSPSP 203
>gi|355703446|gb|EHH29937.1| U2 auxiliary factor 26 [Macaca mulatta]
Length = 220
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH++ F+E++F EL KYGEIE +N+CD+L DH+VGNVYV+FR EE A RA+ L+
Sbjct: 73 EVQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++LRRQ++
Sbjct: 133 RWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVY 186
>gi|242014352|ref|XP_002427855.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
gi|212512324|gb|EEB15117.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
Length = 253
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A +A+ L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|324521720|gb|ADY47915.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 253
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q +F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F EE A +A+K L R+
Sbjct: 94 QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKAVKDLENRW 153
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
+ G+PI V+ SPVTDFRE+ CRQ+E TC +GG+CNFMHLK IS L +LFGR
Sbjct: 154 FNGQPIYVELSPVTDFRESRCRQHEITTCCKGGFCNFMHLKAISPALGEKLFGR 207
>gi|332262088|ref|XP_003280097.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Nomascus
leucogenys]
Length = 181
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/139 (53%), Positives = 96/139 (69%), Gaps = 1/139 (0%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ LS R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELSNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRS 149
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++LRRQL+G RR S R +
Sbjct: 102 HAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQLYGWGPRRRSPPRFHT 161
Query: 150 RSPYRHRSHEDRSHSGHGR 168
R R+ S HGR
Sbjct: 162 GHRPRERNRRHSSDHQHGR 180
>gi|324504738|gb|ADY42042.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 255
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 94/119 (78%), Gaps = 2/119 (1%)
Query: 20 DPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
DP + Q++F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F EE A +A+K
Sbjct: 88 DPEE-QKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFVREEDAEKAVKD 146
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
L R++ G+PI + SPVTDFREA CRQ+E TC++GG+CNFMHLK IS +L +L+GR
Sbjct: 147 LQNRWFNGQPIYAELSPVTDFREARCRQHEVTTCSKGGFCNFMHLKAISPELGDRLYGR 205
>gi|312066026|ref|XP_003136074.1| hypothetical protein LOAG_00486 [Loa loa]
Length = 346
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q +F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F EE A +A+K L R+
Sbjct: 192 QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKAVKDLENRW 251
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
+ G+PI + SPVTDFRE+ CRQ+E TC +GG+CNFMHLK IS +L +LFGR
Sbjct: 252 FNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAISPELGEKLFGR 305
>gi|224011894|ref|XP_002294600.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
gi|220969620|gb|EED87960.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
Length = 197
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 93/130 (71%)
Query: 5 LDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYV 64
L + G G +D + +E F F+ED FEEL+K+G +E+L+ICDNL DHMVG+VY
Sbjct: 61 LKAASEGRAVDGIEVDEAEAREDFLVFFEDFFEELSKFGRLEALHICDNLGDHMVGHVYA 120
Query: 65 QFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLK 124
+F +EE+AA AL ++GRFY GR + V+FSPVTDFREA CR ++E TC RGG+CNF+H+K
Sbjct: 121 KFSDEEEAADALNVMNGRFYDGRKMEVEFSPVTDFREARCRDFDEETCRRGGFCNFLHIK 180
Query: 125 RISRDLRRQL 134
+ L R +
Sbjct: 181 PVPMCLIRDM 190
>gi|410906165|ref|XP_003966562.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 223
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 93/126 (73%), Gaps = 5/126 (3%)
Query: 12 VDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEE 70
DA + ++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGN FR EE
Sbjct: 62 ADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRREE 117
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+L
Sbjct: 118 DAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 177
Query: 131 RRQLFG 136
RR+L+G
Sbjct: 178 RRELYG 183
>gi|193613212|ref|XP_001950331.1| PREDICTED: splicing factor U2af 38 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 249
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 28/168 (16%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR EE A A+ L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEHAEAAVNDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+LR+ L+ R RR
Sbjct: 135 RWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRKYLYSRRSRR 194
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSP 189
H H G +RR RS SP
Sbjct: 195 HRSRSRSR------------DHVG---------------TRRTRSPSP 215
>gi|195155565|ref|XP_002018674.1| GL25824 [Drosophila persimilis]
gi|194114827|gb|EDW36870.1| GL25824 [Drosophila persimilis]
Length = 309
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|170595997|ref|XP_001902599.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158589634|gb|EDP28552.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 248
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 25 QEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q +F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F EE A +A+K L R+
Sbjct: 94 QAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVYVKFLREEDAEKAVKDLENRW 153
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
+ G+PI + SPVTDFRE+ CRQ+E TC +GG+CNFMHLK IS +L +LFGR
Sbjct: 154 FNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAISPELGERLFGR 207
>gi|324522962|gb|ADY48164.1| Splicing factor U2AF 26 kDa subunit, partial [Ascaris suum]
Length = 303
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 93/127 (73%), Gaps = 1/127 (0%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q F++FY ++F E++ +YG IE +N+CDN+ +HM+GNVYV+FR E A RA+ SL+ R+
Sbjct: 72 QREFDEFYREVFVEIDDEYGRIEEMNVCDNVGEHMLGNVYVKFRHESSAERAVNSLNERW 131
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHS 143
+ GRPI + SPV DFR+A CRQYE CNRGG+CNFMHLK++S L+R+L R R+
Sbjct: 132 FDGRPIHCELSPVVDFRDACCRQYEIGECNRGGFCNFMHLKKVSSGLKRKLLRRSERQKR 191
Query: 144 RSRSRSR 150
R ++ R
Sbjct: 192 RKCTKWR 198
>gi|343424964|emb|CBQ68501.1| related to splicing factor U2AF 35 kd subunit [Sporisorium
reilianum SRZ2]
Length = 282
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 88/120 (73%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
Q + ++Q F+ FYED+F EL +YG++ +++CDN+ DH++GNVY ++R E A R
Sbjct: 60 QDCTITDTELQAQFDTFYEDMFVELAQYGQLVEMHVCDNVGDHLIGNVYARYRYEADAQR 119
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
A+ +L+ R+Y G+P+ + SPVTDF+EA CRQ E N CNRGG+CNFMHL+ SR +R+QL
Sbjct: 120 AVDALNDRWYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASRPIRKQL 179
>gi|313227857|emb|CBY23006.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
D G + +Q+H+++FYE++F E+ +KYGEIE +N+C+NL DH+VGNVY++F EE
Sbjct: 64 DDSGQQITETMLQQHYDEFYEEVFFEIEDKYGEIEEMNVCENLGDHLVGNVYIKFYREED 123
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
+A + ++ R++ +PI+ + SPVT+FREA CR YE C RGG+CNFMHLK IS+DLR
Sbjct: 124 CEKAAEGVNDRWFGMQPIVGELSPVTNFREACCRDYEMGECTRGGFCNFMHLKPISKDLR 183
Query: 132 RQLFGR 137
++L+ +
Sbjct: 184 KKLYAK 189
>gi|402592968|gb|EJW86895.1| U2 snRNP splicing factor small subunit [Wuchereria bancrofti]
Length = 248
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 25 QEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q +F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F EE A +A+K L R+
Sbjct: 94 QAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVYVKFLREEDAEKAVKDLENRW 153
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
+ G+PI + SPVTDFRE+ CRQ+E TC +GG+CNFMHLK IS +L +LFGR
Sbjct: 154 FNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAISPELGERLFGR 207
>gi|409080647|gb|EKM81007.1| hypothetical protein AGABI1DRAFT_71717 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197561|gb|EKV47488.1| hypothetical protein AGABI2DRAFT_221673 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 108/177 (61%), Gaps = 23/177 (12%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY ++ E +A A+ S
Sbjct: 63 LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDS 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S DL +QL
Sbjct: 123 CNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRNASPDLVKQL---- 178
Query: 139 RRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
RH + R P +H+ G G +E S+R+RS SP RRGR
Sbjct: 179 --RHGQRLERKLHPPQHQ-------GGGG---------WEP-SKRNRSASPPSRRGR 216
>gi|225581058|gb|ACN94635.1| GA17536 [Drosophila miranda]
Length = 290
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|198476714|ref|XP_001357453.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
gi|198137818|gb|EAL34522.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
Length = 289
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|169778681|ref|XP_001823805.1| splicing factor U2AF subunit [Aspergillus oryzae RIB40]
gi|238499237|ref|XP_002380853.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|83772544|dbj|BAE62672.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692606|gb|EED48952.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|391870811|gb|EIT79981.1| U2 snRNP splicing factor, small subunit [Aspergillus oryzae 3.042]
Length = 209
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 102/158 (64%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + N ++P ++Q HF+ FYED++ E+ KYGEIE L +CDN DH++G
Sbjct: 51 MYQ-----NPAYDPK-NKMNPSQLQNHFDAFYEDVWCEMCKYGEIEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEEDAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R+L + + R R +RS SRS SP
Sbjct: 165 IHRKDPSNELDRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|171695120|ref|XP_001912484.1| hypothetical protein [Podospora anserina S mat+]
gi|170947802|emb|CAP59965.1| unnamed protein product [Podospora anserina S mat+]
Length = 208
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 99/150 (66%), Gaps = 2/150 (1%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED++ E+ KYGEIE L +CDN DH++GNVY +F+ E
Sbjct: 55 PAFDPK-NRMNPSQLQNHFDAFYEDIWCEMCKYGEIEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPE 173
Query: 130 LRRQLFGRYRRRHSRSRSRSRSPYRHRSHE 159
L R+L ++ ++R RSRSP R S E
Sbjct: 174 LEREL-ELSTKKWLKTRPRSRSPTRSPSPE 202
>gi|402224397|gb|EJU04460.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 272
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 102/163 (62%), Gaps = 20/163 (12%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++Q++F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E +A A+ +
Sbjct: 63 LSSQELQDNFDQLYEDLYIELSKFGHLLELHVCDNIGDHLIGNVYARYEWEAEAQAAVDA 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL--FG 136
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGGYCNFMHL+ S+DL + L
Sbjct: 123 LNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGYCNFMHLRIASKDLVKSLEVSQ 182
Query: 137 RYRRR------------------HSRSRSRSRSPYRHRSHEDR 161
R RR + R+RSRSP R EDR
Sbjct: 183 RLERRMQGKENSNAGAGAGWQPPSASKRARSRSPARGGEGEDR 225
>gi|19115857|ref|NP_594945.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe 972h-]
gi|6136086|sp|Q09176.2|U2AF1_SCHPO RecName: Full=Splicing factor U2AF 23 kDa subunit; AltName: Full=U2
auxiliary factor 23 kDa subunit; Short=U2AF23; AltName:
Full=U2 snRNP auxiliary factor small subunit
gi|2347143|gb|AAC49805.1| spU2AF23 [Schizosaccharomyces pombe]
gi|5834791|emb|CAB55173.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe]
Length = 216
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 88/131 (67%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P + G R++ E F+ FYED+F E +KYGE+E L +CDN+ DH+VGNVYV+F+ E
Sbjct: 55 PIHEPNGKKFTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYE 114
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A A+ L+ R+Y+ RP+ + SPVTDFREA CRQ+E + C RGG CNFMH K+ S
Sbjct: 115 ESAQNAIDDLNSRWYSQRPVYAELSPVTDFREACCRQHETSECQRGGLCNFMHAKKPSPQ 174
Query: 130 LRRQLFGRYRR 140
L R L R+
Sbjct: 175 LLRDLVLAQRK 185
>gi|320590311|gb|EFX02754.1| u2 auxiliary factor small [Grosmannia clavigera kw1407]
Length = 208
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 94/142 (66%), Gaps = 6/142 (4%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARAL 76
N ++ ++Q HF+ FYED++ EL KYGE+E L +CDN DH+VGNVY +F+ EE AA A
Sbjct: 60 NGMNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLVGNVYARFKYEESAASAC 119
Query: 77 KSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL-- 134
+L+GR+YA RPI + SPVTDFREA CR C RGGYCNF+H K S +L +L
Sbjct: 120 DALNGRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGYCNFIHRKNPSEELDNELQL 179
Query: 135 ----FGRYRRRHSRSRSRSRSP 152
+ + R R RS SRS SP
Sbjct: 180 ATKKWLKLRGRDERSVSRSPSP 201
>gi|195035315|ref|XP_001989123.1| GH10217 [Drosophila grimshawi]
gi|193905123|gb|EDW03990.1| GH10217 [Drosophila grimshawi]
Length = 273
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|296415596|ref|XP_002837472.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633344|emb|CAZ81663.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED F E+ KYGE+E + +CDN DH++GNVY +F+ E
Sbjct: 55 PAFDPK-NKMNTSQLQNHFDAFYEDFFCEMCKYGEVEEVVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S+D
Sbjct: 114 EDAQTACDALNARWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSKD 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + R R R RS SRS SP
Sbjct: 174 LERELELGMKKWLRARGRDRRSVSRSVSP 202
>gi|194766557|ref|XP_001965391.1| GF24893 [Drosophila ananassae]
gi|190618001|gb|EDV33525.1| GF24893 [Drosophila ananassae]
Length = 267
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|320163034|gb|EFW39933.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Capsaspora
owczarzaki ATCC 30864]
Length = 211
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 94/129 (72%), Gaps = 4/129 (3%)
Query: 12 VDAQGNPLDPRKI---QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFR 67
+ + P+DP + Q+HF++FYED+F E+ KYG +E +N+CDNL++H+VGN YV+FR
Sbjct: 60 ANPESGPIDPETMLASQDHFDEFYEDVFTEMEEKYGAVEEMNVCDNLSEHLVGNTYVKFR 119
Query: 68 EEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS 127
EE A RA + L+ R++ GR + + S VTDF EA CRQY+ C GG+CNFMH+K IS
Sbjct: 120 REEDAERAAEDLNNRWFDGRVVSAELSTVTDFNEACCRQYDIGQCKFGGFCNFMHIKPIS 179
Query: 128 RDLRRQLFG 136
++LRR+++G
Sbjct: 180 KELRREIYG 188
>gi|195114476|ref|XP_002001793.1| GI15018 [Drosophila mojavensis]
gi|193912368|gb|EDW11235.1| GI15018 [Drosophila mojavensis]
Length = 274
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|300176329|emb|CBK23640.2| unnamed protein product [Blastocystis hominis]
Length = 343
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Query: 28 FEDFYEDLFEELNK-YGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F++FYE++++EL++ YG IE L++CDNL DHM+GNVYV+F +EE A +ALK L+ R+YAG
Sbjct: 75 FDEFYEEVYQELSQSYGPIEELHVCDNLNDHMIGNVYVKFEDEEDAEKALKGLTHRYYAG 134
Query: 87 RPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSR 144
RP+ ++SPVTDFREA CRQ+EE C RGGYCNFMHL S+ + + F + R ++R
Sbjct: 135 RPLAPEYSPVTDFREARCRQHEEGQCTRGGYCNFMHLMTPSQPVFYRCFPKGRWGYTR 192
>gi|118399961|ref|XP_001032304.1| zinc finger protein [Tetrahymena thermophila]
gi|89286644|gb|EAR84641.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 389
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 143/286 (50%), Gaps = 34/286 (11%)
Query: 1 MYQRLDMITPGVDAQGNPL---DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADH 57
MYQ + T AQGN + + +K H+E+FYE++F EL YGEI+ L ICDN+ DH
Sbjct: 110 MYQ--NSPTELALAQGNRVSEEEAQKALNHYEEFYEEVFLELASYGEIDDLIICDNIGDH 167
Query: 58 MVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY 117
M GNVYV++ E +A + L SL R+Y + + +FSPVTDF A C+QY E C R GY
Sbjct: 168 MKGNVYVKYVRESEALKCLMSLKTRYYDKQQLQPEFSPVTDFSNAKCKQYIEGQCKRSGY 227
Query: 118 CNFMHLKRISRDLRRQLFGRYRRRH----------------SRSRSRSRSPYRHRSHEDR 161
CN++H K I R RR LF + H RS+ + + R HE
Sbjct: 228 CNYIHSKPIGRPFRRSLFRQMYEEHPEYKNRSRSRSRSDDDERSKKKRKDKERSEKHEKD 287
Query: 162 SHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQ 221
S H R K+ + + ++ + + + +S SPG + SEERRA I +
Sbjct: 288 SKKKHSRSRSSHKKHKKDKDKKKKKSRSHSKHSKSASPGYK--------NSEERRADIAK 339
Query: 222 WNREREQQEEAYKGNTDGGNNDQGINNDGLMQNGN---GYHSYKQQ 264
W E + EE K N G N+ G ++ + N G H Y Q
Sbjct: 340 WGEEDD--EEDMKVNASGSVNNNGTTSNNEQSDSNNKQGTHDYLAQ 383
>gi|195434328|ref|XP_002065155.1| GK14823 [Drosophila willistoni]
gi|194161240|gb|EDW76141.1| GK14823 [Drosophila willistoni]
Length = 287
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|195386376|ref|XP_002051880.1| GJ17240 [Drosophila virilis]
gi|194148337|gb|EDW64035.1| GJ17240 [Drosophila virilis]
Length = 267
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 23 KIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+ED+F E +KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+
Sbjct: 75 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNN 134
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISR+
Sbjct: 135 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 182
>gi|397490405|ref|XP_003816195.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Pan
paniscus]
Length = 181
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 103/166 (62%), Gaps = 28/166 (16%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE RA+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRS 149
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++L+RQL+GR R
Sbjct: 102 HGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLYGR--------GPRH 153
Query: 150 RSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
RSP R H+GH R R HR SP HR GR
Sbjct: 154 RSP-------PRFHTGH-----------HPRERNHR-CSPDHRHGR 180
>gi|322707016|gb|EFY98595.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium
anisopliae ARSEF 23]
Length = 208
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A +A L+ R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 ESAQKACDELNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R L + + R R RS SRS +P
Sbjct: 174 LDRDLTLSTKKWLKLRGRDERSMSRSPTP 202
>gi|339238205|ref|XP_003380657.1| conserved hypothetical protein [Trichinella spiralis]
gi|316976430|gb|EFV59727.1| conserved hypothetical protein [Trichinella spiralis]
Length = 254
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
Query: 25 QEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q+HF++F+E++F+E+ +KYGEIE +N+CDN+ +HM+GNVY++F+ EE A RA+K L+ R+
Sbjct: 100 QQHFDEFFEEIFDEVEDKYGEIEEMNVCDNIGEHMIGNVYIKFKREEDAERAVKDLNTRW 159
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS 127
+ G PI + SPVTDFREA CRQYE C +GG+CNFMHLK IS
Sbjct: 160 FGGMPIYAELSPVTDFREACCRQYEMGDCGKGGFCNFMHLKPIS 203
>gi|93003154|tpd|FAA00160.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 218
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 93/130 (71%), Gaps = 4/130 (3%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYG IE +N+CDNL DH+VGNVY++F +EE A +A+ L+ R++ G+PI+ + S VTDFR
Sbjct: 93 KYGSIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKAVNDLNNRWFNGQPIMSELSTVTDFR 152
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHED 160
EA CRQYE C RGG+CNFMHLK ISR+LRR+L+G R+ + RSRS P R+R
Sbjct: 153 EACCRQYEMGECTRGGFCNFMHLKPISRELRRRLYG---RKEKKKRSRS-PPTRNRRGGS 208
Query: 161 RSHSGHGRRY 170
R G RR+
Sbjct: 209 RERHGRDRRH 218
>gi|400602483|gb|EJP70085.1| splicing factor U2AF 23 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 211
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 98/150 (65%), Gaps = 7/150 (4%)
Query: 10 PGVDAQG-NPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFRE 68
P D + N ++P ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+
Sbjct: 55 PAYDQKNTNRMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKY 114
Query: 69 EEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISR 128
E+ A +A L+GR+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S
Sbjct: 115 EDAAQKACDELNGRWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFCNFIHRKNPSD 174
Query: 129 DLRRQL------FGRYRRRHSRSRSRSRSP 152
+L R L + R R R +S SRS +P
Sbjct: 175 ELDRDLTLSTKKWLRARGRDEKSVSRSPTP 204
>gi|403293028|ref|XP_003937526.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Saimiri boliviensis
boliviensis]
Length = 268
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 110/174 (63%), Gaps = 28/174 (16%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++Q+H++ F+E++F EL KYGEIE +N+ DNL +H+VGN+YV+FR EE A RA+ L
Sbjct: 121 ELQQHYDSFFEEVFTELQEKYGEIEEMNVYDNLRNHLVGNIYVKFRREEDAERAVAELHN 180
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R++ G+ + SPVTDF E+ C QYE C +GG+CNFMHL+ ISR+LR+QL+GR
Sbjct: 181 RWFNGQGVHAKLSPVTDFWESCCHQYEMGECTQGGFCNFMHLRPISRNLRQQLYGR---- 236
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
R RSP RSH+GH R +R+ ++ SP HR GR
Sbjct: 237 ----GPRCRSP-------PRSHTGH--RPRERNCWH----------SPDHRHGR 267
>gi|198430519|ref|XP_002128159.1| PREDICTED: zinc finger (C-x8-C-x5-C-x3-H)-16 [Ciona intestinalis]
Length = 187
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 93/130 (71%), Gaps = 4/130 (3%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYG IE +N+CDNL DH+VGNVY++F +EE A +A+ L+ R++ G+PI+ + S VTDFR
Sbjct: 62 KYGSIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKAVNDLNNRWFNGQPIMSELSTVTDFR 121
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHED 160
EA CRQYE C RGG+CNFMHLK ISR+LRR+L+G R+ + RSRS P R+R
Sbjct: 122 EACCRQYEMGECTRGGFCNFMHLKPISRELRRRLYG---RKEKKKRSRS-PPTRNRRGGS 177
Query: 161 RSHSGHGRRY 170
R G RR+
Sbjct: 178 RERHGRDRRH 187
>gi|12842455|dbj|BAB25609.1| unnamed protein product [Mus musculus]
Length = 239
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS 127
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK IS
Sbjct: 133 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 178
>gi|114676803|ref|XP_001160959.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 3 [Pan
troglodytes]
Length = 181
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 96/139 (69%), Gaps = 1/139 (0%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE RA+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRS 149
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++L+RQL+GR R S R +
Sbjct: 102 HGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLYGRGPRHRSPPRFHT 161
Query: 150 RSPYRHRSHEDRSHSGHGR 168
R R+H+ HGR
Sbjct: 162 GHHPRERNHQCSPDHRHGR 180
>gi|341886073|gb|EGT42008.1| CBN-UAF-2 protein [Caenorhabditis brenneri]
Length = 278
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q +F+DFYE++F E+ KYGE+E +N+C+N+ +HMVGNVYV+F +EE A +A L+ R+
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRW 143
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
+ G+PI + PVTDFRE+ CRQ+E TC++GG+CNFMHLK IS +L +L+GR RR
Sbjct: 144 FNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISSELGDRLYGRRGRR 201
>gi|17544466|ref|NP_503036.1| Protein UAF-2 [Caenorhabditis elegans]
gi|5832799|emb|CAB55137.1| Protein UAF-2 [Caenorhabditis elegans]
Length = 285
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q +F+DFYE++F E+ KYGE+E +N+C+N+ +HMVGNVYV+F +EE A +A L+ R+
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRW 143
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
+ G+PI + PVTDFRE+ CRQ+E TC++GG+CNFMHLK IS +L +L+GR RR
Sbjct: 144 FNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYGRRGRR 201
>gi|268534530|ref|XP_002632396.1| C. briggsae CBR-UAF-2 protein [Caenorhabditis briggsae]
Length = 281
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q +F+DFYE++F E+ KYGE+E +N+C+N+ +HMVGNVYV+F +EE A +A L+ R+
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRW 143
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
+ G+PI + PVTDFRE+ CRQ+E TC++GG+CNFMHLK IS +L +L+GR RR
Sbjct: 144 FNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYGRRGRR 201
>gi|308482690|ref|XP_003103548.1| CRE-UAF-2 protein [Caenorhabditis remanei]
gi|308259969|gb|EFP03922.1| CRE-UAF-2 protein [Caenorhabditis remanei]
Length = 287
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q +F+DFYE++F E+ KYGE+E +N+C+N+ +HMVGNVYV+F +EE A +A L+ R+
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRW 143
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
+ G+PI + PVTDFRE+ CRQ+E TC++GG+CNFMHLK IS +L +L+GR RR
Sbjct: 144 FNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYGRRGRR 201
>gi|322701010|gb|EFY92761.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium acridum
CQMa 102]
Length = 208
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 97/149 (65%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A L+ R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQKACDELNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R L + + R R RS SRS +P
Sbjct: 174 LDRDLTLSTKKWLKLRGRDERSMSRSPTP 202
>gi|169613392|ref|XP_001800113.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
gi|111061972|gb|EAT83092.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
Length = 210
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P+++Q HF+ FYED++ EL +YG +E L +CDN DH++GNVYV+F+ E
Sbjct: 55 PAYDPK-NKMNPQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E + +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 EDSQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R RS SRS +P
Sbjct: 174 LDRELDMCTRKWLKERGRDERSMSRSPTP 202
>gi|443897457|dbj|GAC74797.1| U2 snRNP splicing factor, small subunit, and related proteins
[Pseudozyma antarctica T-34]
Length = 271
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 87/120 (72%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
Q + ++Q F++FYED+F EL KYGE++ +++CDN+ DH++GNVY +++ E A
Sbjct: 60 QDCAITDAELQAQFDEFYEDMFCELAKYGELQEMHVCDNVGDHLIGNVYARYKYEADAQL 119
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
A+ +L+ R+Y +P+ + SPVTDF+EA CRQ E N CNRGG+CNFMHL+ S LR+QL
Sbjct: 120 AVDALNDRWYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASAPLRKQL 179
>gi|340924092|gb|EGS18995.1| putative splicing factor [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 209
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 101/154 (65%), Gaps = 7/154 (4%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
++ +++Q HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ EE AA+A +
Sbjct: 63 MNEQQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAAKACED 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
L+ R+YA RP+ + SPVTDFREA CR C RGG+CNF+H K S +L R+L
Sbjct: 123 LNSRWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELEREL-QLA 181
Query: 139 RRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDD 172
++ + + RSRSP R S E R RRY D
Sbjct: 182 TKKWLKMKPRSRSPTRSPSPEPR------RRYRD 209
>gi|71019619|ref|XP_760040.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
gi|46099833|gb|EAK85066.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
Length = 279
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 93/140 (66%), Gaps = 4/140 (2%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
Q + ++Q F+ FYED+F EL KYG++ +++CDN+ DH++GNVY +++ E A R
Sbjct: 60 QDCTITDTELQAQFDAFYEDMFTELAKYGQLVEMHVCDNVGDHLIGNVYARYKYEADAQR 119
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR-- 132
A+ +L+ R+Y +P+ + SPVTDF+EA CRQ E N CNRGG+CNFMHL+ SR +R+
Sbjct: 120 AVDALNDRWYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASRPIRKEL 179
Query: 133 --QLFGRYRRRHSRSRSRSR 150
QL RRR R ++
Sbjct: 180 NHQLAVELRRRKEEGRDTAK 199
>gi|70986128|ref|XP_748561.1| U2 auxiliary factor small subunit [Aspergillus fumigatus Af293]
gi|66846190|gb|EAL86523.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
Af293]
gi|159128305|gb|EDP53420.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
A1163]
Length = 209
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 100/158 (63%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + N ++P ++Q HF+ FYED++ E+ KYGE+E L +CDN DH++G
Sbjct: 51 MYQ-----NPAYDPK-NKMNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R+L + + R R RS SRS SP
Sbjct: 165 IHRKDPSPELDRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|429851228|gb|ELA26437.1| u2 auxiliary factor small [Colletotrichum gloeosporioides Nara gc5]
Length = 208
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 98/155 (63%), Gaps = 7/155 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S D
Sbjct: 114 DSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSED 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSPYRHRSH 158
L R L + + R R RS SRS +P R H
Sbjct: 174 LDRDLTLSTKKWLKDRGRDERSPSRSPTPEPTRRH 208
>gi|119188829|ref|XP_001245021.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392867930|gb|EAS33646.2| splicing factor U2AF 35 kDa subunit [Coccidioides immitis RS]
Length = 209
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 99/158 (62%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + N ++P ++Q HF+ FYED + E+ KYGE+E + +CDN DH++G
Sbjct: 51 MYQ-----NPAFDPK-NKMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R L + + R R RS SRS SP
Sbjct: 165 IHRKEPSAELERDLELSTKKWLKLRGRDERSVSRSPSP 202
>gi|346324452|gb|EGX94049.1| splicing factor U2AF 35 kDa subunit [Cordyceps militaris CM01]
Length = 211
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 98/150 (65%), Gaps = 7/150 (4%)
Query: 10 PGVDAQG-NPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFRE 68
P D + N ++P ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+
Sbjct: 55 PAYDQKNVNRMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKY 114
Query: 69 EEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISR 128
E+ + +A L+GR+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S
Sbjct: 115 EDASQKACDELNGRWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFCNFIHRKNPSD 174
Query: 129 DLRRQL------FGRYRRRHSRSRSRSRSP 152
+L R L + R R R +S SRS +P
Sbjct: 175 ELDRDLTLSTKKWLRSRGRDEKSVSRSPTP 204
>gi|119474039|ref|XP_001258895.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
gi|119407048|gb|EAW16998.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
Length = 209
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 100/158 (63%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + N ++P ++Q HF+ FYED++ E+ KYGE+E L +CDN DH++G
Sbjct: 51 MYQ-----NPAYDPK-NKMNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R+L + + R R RS SRS SP
Sbjct: 165 IHRKDPSPELDRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|189209401|ref|XP_001941033.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977126|gb|EDU43752.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 214
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ +++Q HF+ FYED++ EL +YG +E L +CDN DH++GNVYV+F+ E
Sbjct: 55 PAYDPK-NKMNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 EDAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R +RS SRS +P
Sbjct: 174 LDRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|388580357|gb|EIM20672.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 216
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 85/118 (72%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARAL 76
N LD R IQ F+ F+EDLF EL K+G + +++CDN+ DH++GNVY ++ E +A A+
Sbjct: 62 NKLDQRGIQVDFDMFFEDLFMELCKFGNLLEMHVCDNVGDHLIGNVYARYEWETEAQAAV 121
Query: 77 KSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L+ R+YAGRP+ + SPVTDFREA CRQ + CNRGG+CNFMHLKR +R L R L
Sbjct: 122 DKLNERWYAGRPLHCELSPVTDFREACCRQNDTGDCNRGGFCNFMHLKRPTRSLIRDL 179
>gi|330940524|ref|XP_003305953.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
gi|311316782|gb|EFQ85946.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
Length = 214
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ +++Q HF+ FYED++ EL +YG +E L +CDN DH++GNVYV+F+ E
Sbjct: 55 PAYDPK-NKMNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 EDAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R +RS SRS +P
Sbjct: 174 LDRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|212526104|ref|XP_002143209.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|242780019|ref|XP_002479507.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
gi|210072607|gb|EEA26694.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|218719654|gb|EED19073.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
Length = 209
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P +IQ HF+ FYED++ E+ KYGEIE + +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NKMNPSQIQNHFDAFYEDIWCEMCKYGEIEEIVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A A +L+ R+YA RP+ + SPVTDFREA CR C RGG+CNF+H K + +
Sbjct: 114 DSAQAACDALNSRWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPTPE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L+R+L + + R R RS SRS SP
Sbjct: 174 LQRELDLATKKWLKERGRDERSVSRSPSP 202
>gi|67904750|ref|XP_682631.1| hypothetical protein AN9362.2 [Aspergillus nidulans FGSC A4]
gi|40747273|gb|EAA66429.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259488204|tpe|CBF87476.1| TPA: U2 auxiliary factor small subunit, putative (AFU_orthologue;
AFUA_3G02380) [Aspergillus nidulans FGSC A4]
Length = 209
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 100/158 (63%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + ++P ++Q HF+ FYED++ E+ KYGE+E L +CDN DH++G
Sbjct: 51 MYQ-----NPAYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R+L + + R R +RS SRS SP
Sbjct: 165 IHRKDPSSELDRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|426242749|ref|XP_004015233.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Ovis
aries]
Length = 181
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVVELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISRDLRRQL+
Sbjct: 102 HAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLY 147
>gi|389624797|ref|XP_003710052.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|351649581|gb|EHA57440.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|440473536|gb|ELQ42326.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae Y34]
gi|440483649|gb|ELQ63999.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae P131]
Length = 209
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 99/158 (62%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + N ++ ++Q HF+ FYEDL+ EL KYGE+E L +CDN DH++G
Sbjct: 51 MYQ-----NPAYDPKNN-MNASQLQNHFDAFYEDLWCELCKYGELEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEDSAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCTRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R+L + + R R RS SRS +P
Sbjct: 165 IHRKNPSEELDRELVLATKKWLKMRGRDERSVSRSPTP 202
>gi|358377722|gb|EHK15405.1| hypothetical protein TRIVIDRAFT_74630 [Trichoderma virens Gv29-8]
Length = 209
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 99/149 (66%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A+ A ++L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSASAACEALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R RS SRS +P
Sbjct: 174 LDRELTLSTKKWLKMRGRDERSVSRSPTP 202
>gi|451850761|gb|EMD64062.1| hypothetical protein COCSADRAFT_199489 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ +++Q HF+ FYED++ EL +YG +E L +CDN DH++GNVYV+F+ E
Sbjct: 55 PAYDPK-NKMNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 EDAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R +RS SRS +P
Sbjct: 174 LDRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|388858152|emb|CCF48220.1| related to splicing factor U2AF 35 kd subunit [Ustilago hordei]
Length = 284
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 91/131 (69%), Gaps = 4/131 (3%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
++Q+ F+ FYED+F EL KYGE+ +++CDN+ DH++GNVY +++ E A A+ +L+ R
Sbjct: 68 ELQQQFDAFYEDMFTELAKYGELVEMHVCDNVGDHLIGNVYARYKYETDAQLAVDALNDR 127
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS----RDLRRQLFGRY 138
+Y G+P+ + SPVTDF+EA CRQ E N CNRGG+CNFMHL+ S ++L QL
Sbjct: 128 WYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASAPTRKELNHQLAVEL 187
Query: 139 RRRHSRSRSRS 149
R+R RS +
Sbjct: 188 RKRKEEGRSTA 198
>gi|121712082|ref|XP_001273656.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
gi|119401808|gb|EAW12230.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
Length = 209
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 100/158 (63%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + ++P ++Q HF+ FYED++ E+ KYGE+E L +CDN DH++G
Sbjct: 51 MYQ-----NPAYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R+L + + R R +RS SRS SP
Sbjct: 165 IHRKDPSAELDRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|310790801|gb|EFQ26334.1| hypothetical protein GLRG_01478 [Glomerella graminicola M1.001]
Length = 209
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S D
Sbjct: 114 DSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSED 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R L + + R R RS SRS +P
Sbjct: 174 LDRDLTLSTKKWLKERGRDERSPSRSPTP 202
>gi|115401000|ref|XP_001216088.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
gi|114190029|gb|EAU31729.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
Length = 209
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 100/158 (63%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + ++P ++Q HF+ FYED++ E+ KYGE+E L +CDN DH++G
Sbjct: 51 MYQ-----NPAYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R+L + + R R +RS SRS SP
Sbjct: 165 IHRKDPSPELDRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|425770129|gb|EKV08603.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
Pd1]
gi|425771678|gb|EKV10115.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
PHI26]
Length = 209
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 100/158 (63%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + N ++P ++Q HF+ FYED++ E+ KYGE+E L ICDN DH++G
Sbjct: 51 MYQ-----NPAYDPK-NKMNPSQMQNHFDAFYEDVWCEMCKYGELEELVICDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYGRFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R+L + + R R RS SRS SP
Sbjct: 165 IHRKDPSSELDRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|345565480|gb|EGX48429.1| hypothetical protein AOL_s00080g58 [Arthrobotrys oligospora ATCC
24927]
Length = 210
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 99/158 (62%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + N ++P ++Q HF+ FYED++ E+ KYGEIE L +CDN DH++G
Sbjct: 51 MYQ-----NPAFDPK-NKMNPNQLQTHFDGFYEDIWCEMCKYGEIEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKFEEDAQKACDELNQRWYAARPIYCELSPVTDFREACCRLNSGEGCQRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K ++++ R L + R R + R +RS SP
Sbjct: 165 IHRKEPTKEMDRDLELSTKKWLRIRGKDEREATRSPSP 202
>gi|46124965|ref|XP_387036.1| hypothetical protein FG06860.1 [Gibberella zeae PH-1]
gi|408388308|gb|EKJ67994.1| hypothetical protein FPSE_11805 [Fusarium pseudograminearum CS3096]
Length = 209
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 ESAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R L + + R R RS SRS +P
Sbjct: 174 LDRDLTLSTKKWLKQRGRDERSASRSPTP 202
>gi|303323541|ref|XP_003071762.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240111464|gb|EER29617.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035093|gb|EFW17035.1| splicing factor U2AF 35 kDa subunit [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 98/158 (62%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + N ++P ++Q HF+ FYED + E+ KYGE+E + +CDN DH++G
Sbjct: 51 MYQ-----NPAFDPK-NKMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ E+ A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEDSAQNACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R L + + R R RS SRS SP
Sbjct: 165 IHRKEPSAELERDLELSTKKWLKLRGRDERSVSRSPSP 202
>gi|451995958|gb|EMD88425.1| hypothetical protein COCHEDRAFT_1205672 [Cochliobolus
heterostrophus C5]
Length = 211
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ +++Q HF+ FYED++ EL +YG +E L +CDN DH++GNVYV+F+ E
Sbjct: 55 PAYDPK-NKMNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 EDAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R +RS SRS +P
Sbjct: 174 LDRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|380493273|emb|CCF34000.1| hypothetical protein CH063_06082 [Colletotrichum higginsianum]
Length = 209
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S D
Sbjct: 114 DSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSED 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R L + + R R RS SRS +P
Sbjct: 174 LDRDLTLSTKKWLKDRGRDERSPSRSPTP 202
>gi|392593590|gb|EIW82915.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 231
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 84/116 (72%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY +F E +A A+ +
Sbjct: 63 LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARFEWETEAQAAVDN 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S DL R L
Sbjct: 123 LNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASADLVRSL 178
>gi|145228481|ref|XP_001388549.1| splicing factor U2AF subunit [Aspergillus niger CBS 513.88]
gi|134054638|emb|CAK43483.1| unnamed protein product [Aspergillus niger]
gi|350637745|gb|EHA26101.1| hypothetical protein ASPNIDRAFT_55496 [Aspergillus niger ATCC 1015]
Length = 209
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 99/158 (62%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + ++P ++Q HF+ FYED++ E+ KYGE+E L +CDN DH++G
Sbjct: 51 MYQ-----NPAYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R L + + R R +RS SRS SP
Sbjct: 165 IHRKDPSNELDRDLRLSTKKWLKERGRDARSVSRSPSP 202
>gi|326477662|gb|EGE01672.1| splicing factor U2AF 35 kDa subunit [Trichophyton equinum CBS
127.97]
Length = 169
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 94/142 (66%), Gaps = 6/142 (4%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARAL 76
N ++P ++Q HF+ FYED + E+ KYGEIE + +C+N DH++GNVY +F+ E+ A +A
Sbjct: 21 NKMNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKAC 80
Query: 77 KSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL-- 134
+L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +L R+L
Sbjct: 81 DALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEELDRELEL 140
Query: 135 ----FGRYRRRHSRSRSRSRSP 152
+ R R R RS +RS SP
Sbjct: 141 STKKWLRLRGRDERSVTRSPSP 162
>gi|255941442|ref|XP_002561490.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586113|emb|CAP93860.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 100/158 (63%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + N ++P ++Q HF+ FYED++ E+ KYGE+E L ICDN DH++G
Sbjct: 51 MYQ-----NPAYDPK-NKMNPSQMQNHFDAFYEDVWCEMCKYGELEELVICDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYGRFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R+L + + R R RS SRS SP
Sbjct: 165 IHRKDPSPELDRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|452983858|gb|EME83616.1| hypothetical protein MYCFIDRAFT_85447 [Pseudocercospora fijiensis
CIRAD86]
Length = 209
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 94/140 (67%), Gaps = 6/140 (4%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
++P+++Q HF+ FYED + E+ K+GEIE + +CDN DH++GNVY +F+ EE A +A +
Sbjct: 63 MNPQQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYEESAQKACDA 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +L R+L
Sbjct: 123 LNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPELERELELAT 182
Query: 135 --FGRYRRRHSRSRSRSRSP 152
+ R R R RS +RS SP
Sbjct: 183 KKWLRERGRDPRSVTRSPSP 202
>gi|296810970|ref|XP_002845823.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843211|gb|EEQ32873.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 209
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D++ N ++P ++Q HF+ FYED + E+ KYGEIE + +C+N DH++GNVY +F+ E
Sbjct: 55 PQYDSK-NKMNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + R R R RS +RS SP
Sbjct: 174 LDRELDLSTKKWLRLRGRDERSMTRSPSP 202
>gi|261196914|ref|XP_002624860.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|225562652|gb|EEH10931.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
gi|239596105|gb|EEQ78686.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609690|gb|EEQ86677.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ER-3]
gi|240279459|gb|EER42964.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H143]
gi|325092588|gb|EGC45898.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H88]
gi|327355349|gb|EGE84206.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 209
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 97/149 (65%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDTK-NKMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R RS +RS SP
Sbjct: 174 LERELELSTKKWLKMRGRDERSVTRSPSP 202
>gi|389741909|gb|EIM83097.1| splicing factor U2AF subunit [Stereum hirsutum FP-91666 SS1]
Length = 230
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 86/116 (74%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L P+++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E +A A+ +
Sbjct: 63 LTPKELQDGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDN 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S++L L
Sbjct: 123 LNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKELVSSL 178
>gi|367052051|ref|XP_003656404.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
gi|347003669|gb|AEO70068.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
Length = 231
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 97/146 (66%), Gaps = 4/146 (2%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 78 PAFDPK-NRMNASQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYE 136
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 137 DSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPE 196
Query: 130 LRRQL---FGRYRRRHSRSRSRSRSP 152
L R+L ++ + RSRS +RSP
Sbjct: 197 LERELQLATKKWLKMKPRSRSPTRSP 222
>gi|344298239|ref|XP_003420801.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Loxodonta
africana]
Length = 181
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVTELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+LRRQL+
Sbjct: 102 HAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 147
>gi|194215326|ref|XP_001492664.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Equus caballus]
gi|345785118|ref|XP_853689.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|410983235|ref|XP_003997947.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Felis catus]
Length = 181
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+LRRQL+
Sbjct: 102 HAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 147
>gi|2130488|pir||JC6068 U2 auxiliary factor small chain - fission yeast
(Schizosaccharomyces pombe)
Length = 200
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 83/118 (70%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P + G R++ E F+ FYED+F E +KYGE+E L +CDN+ DH+VGNVYV+F+ E
Sbjct: 55 PIHEPNGKKFTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYE 114
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS 127
E A A+ L+ R+Y+ RP+ + SPVTDFREA CRQ+E + C RGG CNFMH K+ S
Sbjct: 115 ESAQNAIDDLNSRWYSQRPVYAELSPVTDFREACCRQHETSECQRGGLCNFMHAKKPS 172
>gi|213401493|ref|XP_002171519.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|211999566|gb|EEB05226.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 86/125 (68%)
Query: 16 GNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
G + ++ E F+ FYED+F E KYGE+E + +CDN+ DH++GNVYV+F+ EE A A
Sbjct: 61 GKHMSQAELDEQFDAFYEDMFCEFAKYGEVEQIVVCDNIGDHLIGNVYVRFKYEESAQNA 120
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ L+ R+Y+ +P+ + SPVTDFREA CRQ+E + C RGG CNFMH K+ S L R+L
Sbjct: 121 IDDLNSRWYSQKPVYAELSPVTDFREACCRQHETSECGRGGLCNFMHAKKPSPHLIRELM 180
Query: 136 GRYRR 140
R+
Sbjct: 181 AAQRK 185
>gi|335289512|ref|XP_003355908.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2 [Sus
scrofa]
Length = 181
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+LRRQL+
Sbjct: 102 HAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLY 147
>gi|315051764|ref|XP_003175256.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|327296385|ref|XP_003232887.1| splicing factor U2AF subunit [Trichophyton rubrum CBS 118892]
gi|311340571|gb|EFQ99773.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|326465198|gb|EGD90651.1| splicing factor U2AF 35 kDa subunit [Trichophyton rubrum CBS
118892]
gi|326473197|gb|EGD97206.1| splicing factor U2AF 35 kDa subunit [Trichophyton tonsurans CBS
112818]
Length = 209
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 94/142 (66%), Gaps = 6/142 (4%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARAL 76
N ++P ++Q HF+ FYED + E+ KYGEIE + +C+N DH++GNVY +F+ E+ A +A
Sbjct: 61 NKMNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKAC 120
Query: 77 KSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL-- 134
+L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +L R+L
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEELDRELEL 180
Query: 135 ----FGRYRRRHSRSRSRSRSP 152
+ R R R RS +RS SP
Sbjct: 181 STKKWLRLRGRDERSVTRSPSP 202
>gi|342890175|gb|EGU89039.1| hypothetical protein FOXB_00451 [Fusarium oxysporum Fo5176]
Length = 209
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 ESAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R L + + R R +S SRS +P
Sbjct: 174 LDRDLTLSTKKWLKERGRDEKSASRSPTP 202
>gi|154279620|ref|XP_001540623.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
gi|150412566|gb|EDN07953.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
Length = 270
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 97/149 (65%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E
Sbjct: 116 PAYDTK-NKMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYE 174
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 175 DSAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPE 234
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R RS +RS SP
Sbjct: 235 LERELELSTKKWLKMRGRDERSVTRSPSP 263
>gi|302502949|ref|XP_003013435.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|302652540|ref|XP_003018117.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
gi|291176999|gb|EFE32795.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|291181728|gb|EFE37472.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
Length = 180
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 94/142 (66%), Gaps = 6/142 (4%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARAL 76
N ++P ++Q HF+ FYED + E+ KYGEIE + +C+N DH++GNVY +F+ E+ A +A
Sbjct: 32 NKMNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKAC 91
Query: 77 KSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL-- 134
+L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +L R+L
Sbjct: 92 DALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEELDRELEL 151
Query: 135 ----FGRYRRRHSRSRSRSRSP 152
+ R R R RS +RS SP
Sbjct: 152 STKKWLRLRGRDERSVTRSPSP 173
>gi|340519983|gb|EGR50220.1| predicted protein [Trichoderma reesei QM6a]
Length = 209
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 99/149 (66%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A+ A ++L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSASAACEALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R RS+SRS +P
Sbjct: 174 LDRELTLSTKKWLKMRGRDERSQSRSPTP 202
>gi|169846828|ref|XP_001830128.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
gi|116508898|gb|EAU91793.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
Length = 230
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 108/191 (56%), Gaps = 34/191 (17%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY ++ E +A A+ S
Sbjct: 63 LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDS 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S +L RQL
Sbjct: 123 CNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLPSPELLRQL---- 178
Query: 139 RRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHR---RGR 195
RH + R +P ++ +G G PS R RGR
Sbjct: 179 --RHGQRLERKLNP-------PKNENGAG------------------GWEPSKREGGRGR 211
Query: 196 SRSPGGRRYHS 206
S SPG R HS
Sbjct: 212 SASPGRRTTHS 222
>gi|353245348|emb|CCA76358.1| related to splicing factor U2AF 35 kd subunit [Piriformospora
indica DSM 11827]
Length = 217
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 85/116 (73%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY +F E +A A+ +
Sbjct: 63 LSAKELQEGFDAVYEDLYCELTKFGHLLELHVCDNVGDHLIGNVYARFEWETEAQAAVDN 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S +L++ L
Sbjct: 123 LNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPELKKSL 178
>gi|452845011|gb|EME46945.1| hypothetical protein DOTSEDRAFT_70773 [Dothistroma septosporum
NZE10]
Length = 209
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 93/140 (66%), Gaps = 6/140 (4%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
++P ++Q HF+ FYED + E+ KYGEIE + +CDN DH++GNVY +F+ E+ A +A +
Sbjct: 63 MNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDA 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +L R+L
Sbjct: 123 LNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDRELELAT 182
Query: 135 --FGRYRRRHSRSRSRSRSP 152
+ R R R RS +RS SP
Sbjct: 183 KKWLRERGRDDRSVTRSPSP 202
>gi|85112805|ref|XP_964414.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336267438|ref|XP_003348485.1| hypothetical protein SMAC_02979 [Sordaria macrospora k-hell]
gi|28926195|gb|EAA35178.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336464311|gb|EGO52551.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2508]
gi|350296398|gb|EGZ77375.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2509]
gi|380092140|emb|CCC10408.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 208
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 96/146 (65%), Gaps = 4/146 (2%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAFDPK-NRMNASQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPE 173
Query: 130 LRRQL---FGRYRRRHSRSRSRSRSP 152
L R+L ++ + RSRS +RSP
Sbjct: 174 LERELELSTKKWLKMRPRSRSPTRSP 199
>gi|392570233|gb|EIW63406.1| splicing factor U2AF subunit [Trametes versicolor FP-101664 SS1]
Length = 230
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 19/175 (10%)
Query: 22 RKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
+++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY ++ E +A A+ +L+
Sbjct: 66 KELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLND 125
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ + DL R L R
Sbjct: 126 RWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLPTPDLARSL------R 179
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRS 196
H + R +P ++ G G R+ R RS SP+ R GR+
Sbjct: 180 HGQRLERRLNP-------TQTTGGGGWEPTKRE------GARARSASPAKRGGRN 221
>gi|395333024|gb|EJF65402.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 230
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 103/174 (59%), Gaps = 19/174 (10%)
Query: 22 RKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
+++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY ++ E +A A+ +L+
Sbjct: 66 KELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDNLND 125
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S +L R L R
Sbjct: 126 RWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPELVRSL------R 179
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
H + R R H + G G R+ R RS SPS R GR
Sbjct: 180 HGQRLER-------RLHPPTTTGGGGWEPGKRE------GGRGRSASPSKRGGR 220
>gi|390601914|gb|EIN11307.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 238
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 86/116 (74%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++QE F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E +A A+ +
Sbjct: 63 LTEQQLQEGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDN 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S++L + L
Sbjct: 123 LNNRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKELVKSL 178
>gi|409044918|gb|EKM54399.1| hypothetical protein PHACADRAFT_174897 [Phanerochaete carnosa
HHB-10118-sp]
Length = 226
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 103/176 (58%), Gaps = 22/176 (12%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY ++ E +A A+ +
Sbjct: 63 LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQTAVDN 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S +L R L
Sbjct: 123 LNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPELVRSL---- 178
Query: 139 RRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRG 194
RH + R R H +S G G +E R RS SP + G
Sbjct: 179 --RHGQRLER-------RLHPQQSTGGGG---------WEPSKSRARSASPRRKGG 216
>gi|453086343|gb|EMF14385.1| splicing factor U2AF 35 kDa subunit [Mycosphaerella populorum
SO2202]
Length = 209
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 93/140 (66%), Gaps = 6/140 (4%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
++P+++Q HF+ FYED + E+ KYGEIE + +CDN DH++GNVY +F+ E+ A +A +
Sbjct: 63 MNPQQLQNHFDAFYEDFWCEMCKYGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDA 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K +L R+L
Sbjct: 123 LNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPGPELERELELAT 182
Query: 135 --FGRYRRRHSRSRSRSRSP 152
+ R R R RS +RS SP
Sbjct: 183 KKWLRERGRDERSVTRSASP 202
>gi|170117299|ref|XP_001889837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635177|gb|EDQ99488.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 229
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 84/116 (72%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++QE F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E +A A+ S
Sbjct: 63 LTEKELQEGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDS 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S+DL L
Sbjct: 123 CNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKDLVSSL 178
>gi|440635086|gb|ELR05005.1| splicing factor U2AF 35 kDa subunit [Geomyces destructans 20631-21]
Length = 209
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 95/149 (63%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + LD +++Q HF+ FYED + E+ KYGE+E + ICDN DH++GNVY +F+ E
Sbjct: 55 PAYDPKAK-LDAKQLQMHFDAFYEDFWCEMCKYGELEEVVICDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C R G+CNF+H K S +
Sbjct: 114 DSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRAGFCNFIHRKNPSPE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + R R R RS +RS SP
Sbjct: 174 LERELDMSTRKWLRERGRDERSVTRSPSP 202
>gi|116182458|ref|XP_001221078.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186154|gb|EAQ93622.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 208
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 97/150 (64%), Gaps = 2/150 (1%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAFDPK-NRMNASQLQNHFDAFYEDIWCEMCKYGEVEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 114 DSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPGPE 173
Query: 130 LRRQLFGRYRRRHSRSRSRSRSPYRHRSHE 159
L R+L ++ ++R RSRSP R S E
Sbjct: 174 LDREL-ELSTKKWLKTRPRSRSPTRSPSPE 202
>gi|380802765|gb|AFE73258.1| splicing factor U2AF 26 kDa subunit isoform 1, partial [Macaca
mulatta]
Length = 131
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CD+L DH+VGNVYV+FR EE A RA+ L+ R++ G+ +
Sbjct: 24 FSQEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAV 83
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++LRRQ++GR
Sbjct: 84 HAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVYGR 131
>gi|76156406|gb|AAX27612.2| SJCHGC07381 protein [Schistosoma japonicum]
Length = 219
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 77/95 (81%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFR
Sbjct: 90 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFR 149
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
EA CRQYE C RGG+CNFMHLK ISR+L R+L+
Sbjct: 150 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 184
>gi|378729857|gb|EHY56316.1| hypothetical protein HMPREF1120_04400 [Exophiala dermatitidis
NIH/UT8656]
Length = 209
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NKMNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R RS SRS SP
Sbjct: 174 LERELELSTKKWLKMRGRDERSVSRSPSP 202
>gi|226470094|emb|CAX70328.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486850|emb|CAX74502.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486852|emb|CAX74503.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489605|emb|CAX74953.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489607|emb|CAX74954.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 221
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 77/95 (81%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFR
Sbjct: 92 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
EA CRQYE C RGG+CNFMHLK ISR+L R+L+
Sbjct: 152 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 186
>gi|256088283|ref|XP_002580274.1| U2 snRNP auxiliary factor small subunit [Schistosoma mansoni]
gi|108861853|gb|ABG21828.1| U2 snRNP auxiliary factor small subunit-like protein [Schistosoma
mansoni]
gi|360043806|emb|CCD81352.1| putative u2 snRNP auxiliary factor, small subunit [Schistosoma
mansoni]
Length = 221
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 77/95 (81%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFR
Sbjct: 92 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
EA CRQYE C RGG+CNFMHLK ISR+L R+L+
Sbjct: 152 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 186
>gi|302414438|ref|XP_003005051.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261356120|gb|EEY18548.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|346979310|gb|EGY22762.1| splicing factor U2AF 23 kDa subunit [Verticillium dahliae VdLs.17]
Length = 210
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYED++ EL +YGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNPSQLQNHFDAFYEDIWCELCQYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQKACDALNSRWYAARPIYAELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R RS SRS +P
Sbjct: 174 LDRELVLSTKKWLKDRGRDERSPSRSPTP 202
>gi|442763053|gb|JAA73685.1| Putative u2 snrnp splicing factor small subunit, partial [Ixodes
ricinus]
Length = 218
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 85/123 (69%), Gaps = 7/123 (5%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE + +CDN+ DH++GNVYV++R+E A A+ LSGRFY G+PI +++PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYVKYRDENSAGLAISMLSGRFYGGKPIQCEYTPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL-------FGRYRRRHSRSRSRSRSPY 153
EA CRQ+ + C RGGYCNFMH+K + R +RR+L + YRRR R S SP
Sbjct: 152 EARCRQFVDGQCRRGGYCNFMHIKHVPRSVRRKLNERMYAEYPEYRRRSPRRSDCSASPD 211
Query: 154 RHR 156
+ R
Sbjct: 212 KRR 214
>gi|358333982|dbj|GAA30118.2| splicing factor U2AF 35 kDa subunit [Clonorchis sinensis]
Length = 220
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 77/95 (81%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFR
Sbjct: 88 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNLRWFGGRPVHAELSPVTDFR 147
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
EA CRQYE C RGG+CNFMHLK ISR+L R+L+
Sbjct: 148 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 182
>gi|312071157|ref|XP_003138478.1| hypothetical protein LOAG_02893 [Loa loa]
gi|307766351|gb|EFO25585.1| hypothetical protein LOAG_02893 [Loa loa]
Length = 307
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 93/123 (75%), Gaps = 4/123 (3%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q F++F+ +++ E++ KYGEI+ +N+CDN +HM+GNVY++F E A+ A+K+L+ R+
Sbjct: 75 QREFDEFFREVYLEIDEKYGEIDEMNVCDNTGEHMLGNVYIKFLHESNASNAMKALNNRW 134
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---FGRYRR 140
+ G+PI + SPV+DFR+A CRQYE C+RGG+CNFMHLK++S L+R+L G+ RR
Sbjct: 135 FDGKPIHCELSPVSDFRDACCRQYENGECSRGGFCNFMHLKKVSSSLKRKLEKESGKARR 194
Query: 141 RHS 143
+ S
Sbjct: 195 KKS 197
>gi|449546411|gb|EMD37380.1| hypothetical protein CERSUDRAFT_114053 [Ceriporiopsis subvermispora
B]
Length = 230
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 107/178 (60%), Gaps = 20/178 (11%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY ++ E +A A+ +
Sbjct: 63 LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDN 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S++L L
Sbjct: 123 LNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKELVSSL---- 178
Query: 139 RRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRS 196
RH + R R H ++ G G R+ R RS SP+ +RGR+
Sbjct: 179 --RHGQRLER-------RLHPPKTEGGGGWEPTKRE------GARGRSASPA-KRGRN 220
>gi|396460408|ref|XP_003834816.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
gi|312211366|emb|CBX91451.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
Length = 207
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 99/149 (66%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ +++Q HF+ FYED++ EL ++G +E L +CDN DH++GNVYV+F+ E
Sbjct: 55 PAYDPK-NKMNAQQMQMHFDAFYEDIWCELCQFGLVEELVVCDNNNDHLIGNVYVRFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E + +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 EDSQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R RS SRS +P
Sbjct: 174 LERELDMCTRKWLKERGRDPRSMSRSPTP 202
>gi|336371539|gb|EGN99878.1| hypothetical protein SERLA73DRAFT_180138 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384299|gb|EGO25447.1| hypothetical protein SERLADRAFT_465605 [Serpula lacrymans var.
lacrymans S7.9]
Length = 230
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 105/181 (58%), Gaps = 24/181 (13%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY ++ E +A A+ +
Sbjct: 63 LTEQELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDN 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S++L L
Sbjct: 123 LNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKELVSSL---- 178
Query: 139 RRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSR---RHRSTSPSHRRGR 195
R+ R H ++ SG G +E R R RS SPS R G
Sbjct: 179 ---------RAGQRLERRLHPSKNESGGGG--------WEPTKREGGRGRSASPSRRGGH 221
Query: 196 S 196
S
Sbjct: 222 S 222
>gi|154301115|ref|XP_001550971.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|156056997|ref|XP_001594422.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154702015|gb|EDO01754.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
gi|347840346|emb|CCD54918.1| similar to splicing factor U2af 38 kDa subunit [Botryotinia
fuckeliana]
Length = 210
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED + E+ K+GEIE + +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NKMNASQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + R R R RS +RS SP
Sbjct: 174 LDRELELSTKKWLRMRGRDERSVTRSPSP 202
>gi|444511515|gb|ELV09911.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 218
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMV 59
+Y+ L +P + ++Q+H+++F++++F E+ KYGE+E +N+CDN DH+
Sbjct: 51 IYRNLHNSSPSAGGLHGAVSDAEMQQHYDEFFKEVFTEMEEKYGEVEEMNVCDNAGDHLA 110
Query: 60 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 119
GNVYV+FR EE A +A+ L+ R++ +PI + SPVTDFREA CRQYE C +GG+CN
Sbjct: 111 GNVYVKFRREEDAEKAVMDLNNRWFNRQPIRAELSPVTDFREACCRQYEMGECTQGGFCN 170
Query: 120 FMHLKRISRDL 130
MHLK ISR+L
Sbjct: 171 LMHLKPISREL 181
>gi|226469292|emb|CAX70125.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 198
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 77/95 (81%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFR
Sbjct: 69 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFR 128
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
EA CRQYE C RGG+CNFMHLK ISR+L R+L+
Sbjct: 129 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 163
>gi|294936347|ref|XP_002781727.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239892649|gb|EER13522.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 278
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 79/102 (77%)
Query: 25 QEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
QEHFE FYE++F EL YGEIE L + DN+ DHM+GNVYV++ +EE A ++ L+GRFY
Sbjct: 76 QEHFEAFYEEVFLELANYGEIEDLAVVDNIGDHMIGNVYVKYVKEESAEMCIQKLTGRFY 135
Query: 85 AGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI 126
AGR I ++SPVTDF EA CRQ+++ C+RGG+CNF+H K +
Sbjct: 136 AGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 177
>gi|325303588|tpg|DAA34232.1| TPA_inf: U2 snRNP splicing factor small subunit [Amblyomma
variegatum]
Length = 192
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 85/123 (69%), Gaps = 14/123 (11%)
Query: 19 LDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALK 77
+ ++QEHF++F+ED+F EL +KYGEIE +N+CDNL DH+VGNVYV+FR EE A +A+
Sbjct: 70 MTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVA 129
Query: 78 SLSGRFYAGRPIIVDFSPVTDFREATCRQYEENT-------------CNRGGYCNFMHLK 124
L+ R++AG PI + SPVTDFREA CRQYE C R G+CNFMH +
Sbjct: 130 DLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRSTTATEECTRSGFCNFMHPQ 189
Query: 125 RIS 127
IS
Sbjct: 190 PIS 192
>gi|407919834|gb|EKG13056.1| Inositol monophosphatase [Macrophomina phaseolina MS6]
Length = 209
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 95/149 (63%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NKMNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKVPSPE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R RS SRS SP
Sbjct: 174 LERELELSTKKWLKMRGRDERSVSRSPSP 202
>gi|340371029|ref|XP_003384048.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Amphimedon
queenslandica]
Length = 188
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
Query: 19 LDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALK 77
+ P + Q HFE+F+ED+F E KYG IE +++CDNL DH++GNVY++FR EE A +A++
Sbjct: 62 VSPEEEQSHFEEFFEDVFIECEEKYGPIEKMHVCDNLGDHLIGNVYIKFRFEEDAEKAVQ 121
Query: 78 SLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 136
SL+ R++ +P+ + SPVT+F+EA C Q++ C RGG+CNF H+K I LRR L+G
Sbjct: 122 SLNNRWFNAQPVRAELSPVTNFKEACCHQFDVGQCGRGGFCNFWHIKPIPHKLRRFLYG 180
>gi|358391429|gb|EHK40833.1| hypothetical protein TRIATDRAFT_301601 [Trichoderma atroviride IMI
206040]
Length = 209
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQAAADTLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R+L + + R R RS SRS +P
Sbjct: 174 LDRELTLSTKKWLKSRGRDERSASRSPTP 202
>gi|302679412|ref|XP_003029388.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
gi|300103078|gb|EFI94485.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
Length = 228
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 85/116 (73%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L+ +++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY ++ E +A A+ +
Sbjct: 63 LNEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDN 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S++L L
Sbjct: 123 LNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKELVESL 178
>gi|406862517|gb|EKD15567.1| splicing factor U2AF 35 kDa subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 209
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED + E+ K+GEIE + +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NKMNASQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQKASDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R++ + R R R RS SRS SP
Sbjct: 174 LDREIELSTKKWLRLRGRDERSASRSPSP 202
>gi|295661444|ref|XP_002791277.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280839|gb|EEH36405.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226292865|gb|EEH48285.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 209
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDTK-NKMNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L ++L + + R R RS +RS SP
Sbjct: 174 LEKELELSTKKWLKMRGRDERSVTRSPSP 202
>gi|324505367|gb|ADY42309.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 275
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 83/119 (69%), Gaps = 6/119 (5%)
Query: 40 NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 99
+K+G I+ +N+CDN+ +HM+GNVYV+F EE A + +K L R++ G PI + SPVTDF
Sbjct: 100 DKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLDDRWFNGCPIYAELSPVTDF 159
Query: 100 REATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSH 158
REA CRQYE CN+G +CNFMHLK+ISRDLRR+L+G SR+ R Y SH
Sbjct: 160 REACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYG------SRADYRGTGYYGAGSH 212
>gi|302915833|ref|XP_003051727.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732666|gb|EEU46014.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 209
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 95/149 (63%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPK-NRMNQSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 ESAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R L + + R R +S SRS +P
Sbjct: 174 LDRDLQLSTKKWLKQRGRDEKSVSRSPTP 202
>gi|312088442|ref|XP_003145864.1| hypothetical protein LOAG_10291 [Loa loa]
gi|307758974|gb|EFO18208.1| hypothetical protein LOAG_10291 [Loa loa]
Length = 252
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 76/97 (78%)
Query: 40 NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 99
+K+G I+ +N+CDN+ +HM+GNVYV+F EE A + +K L R++ G P+ + SPVTDF
Sbjct: 99 DKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENRWFNGSPVYAELSPVTDF 158
Query: 100 REATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 136
REA CRQYE CN+G +CNFMHLK+ISRDLRR+L+G
Sbjct: 159 REACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYG 195
>gi|170596198|ref|XP_001902678.1| splicing factor U2AF35 [Brugia malayi]
gi|158589514|gb|EDP28475.1| splicing factor U2AF35, putative [Brugia malayi]
Length = 247
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 76/97 (78%)
Query: 40 NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 99
+K+G I+ +N+CDN+ +HM+GNVYV+F EE A + +K L R++ G P+ + SPVTDF
Sbjct: 99 DKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENRWFNGSPVYAELSPVTDF 158
Query: 100 REATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 136
REA CRQYE CN+G +CNFMHLK+ISRDLRR+L+G
Sbjct: 159 REACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYG 195
>gi|443916710|gb|ELU37680.1| splicing factor U2AF 26 kDa subunit [Rhizoctonia solani AG-1 IA]
Length = 517
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 82/112 (73%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
++Q+ F+ YEDL+ EL KYG + L++CDN+ DH++GNVY ++ E +A A+ +L+ R
Sbjct: 353 QLQQDFDTTYEDLYCELAKYGNLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDALNNR 412
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S+ L +L
Sbjct: 413 WYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKKLVSEL 464
>gi|209882274|ref|XP_002142574.1| U2 snRNP auxiliary factor small subunit [Cryptosporidium muris
RN66]
gi|209558180|gb|EEA08225.1| U2 snRNP auxiliary factor small subunit, putative [Cryptosporidium
muris RN66]
Length = 255
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 105/191 (54%), Gaps = 33/191 (17%)
Query: 39 LNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTD 98
L KYGEI L +CDN+ DHM+GNVYV++ EE A AL L GR Y+G+ I + SPV+D
Sbjct: 90 LAKYGEISDLLVCDNIGDHMIGNVYVRYTNEEYAKSALDKLKGRSYSGKLIDAELSPVSD 149
Query: 99 FREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRH---SRSRSRSRSPYRH 155
F+EA CRQ+ + CNRGGYCNFMH+K I R ++ ++F + R H S+ +S S YRH
Sbjct: 150 FKEARCRQFIDGCCNRGGYCNFMHIKHIPRCVKNKIFQQMYRDHPEYSKKKSDRYSDYRH 209
Query: 156 RSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEER 215
DD + R+ T ++ +R+ SEER
Sbjct: 210 ---------------DDLKRELLDDDDRYDYT---------------KHTKYIRQSSEER 239
Query: 216 RAKIEQWNRER 226
R IE WN++R
Sbjct: 240 RQMIEMWNKQR 250
>gi|170580643|ref|XP_001895352.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158597751|gb|EDP35805.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 294
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 93/126 (73%), Gaps = 5/126 (3%)
Query: 23 KIQEHFEDFYEDLFEELNK-YGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
K Q F++F+ +++ E+++ YGEI+ +N+CDN +HM+GNVY++F E A A+K+L+
Sbjct: 58 KEQREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNAXNAVKALNN 117
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL----FGR 137
R++ G+PI + SPV+DFR+A CRQYE C+RGG+CNFMHLK++S L+R+L GR
Sbjct: 118 RWFNGKPIHCELSPVSDFRDACCRQYENGECSRGGFCNFMHLKKVSSSLKRKLEKESEGR 177
Query: 138 YRRRHS 143
RR+ S
Sbjct: 178 KRRKKS 183
>gi|402586021|gb|EJW79960.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Wuchereria
bancrofti]
Length = 215
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 76/97 (78%)
Query: 40 NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 99
+K+G I+ +N+CDN+ +HM+GNVYV+F EE A + +K L R++ G P+ + SPVTDF
Sbjct: 99 DKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENRWFNGSPVYAELSPVTDF 158
Query: 100 REATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 136
REA CRQYE CN+G +CNFMHLK+ISRDLRR+L+G
Sbjct: 159 REACCRQYELGGCNKGAFCNFMHLKQISRDLRRKLYG 195
>gi|238586680|ref|XP_002391246.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
gi|215455659|gb|EEB92176.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
Length = 249
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 84/116 (72%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +++QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY ++ E +A A+ +
Sbjct: 68 LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQTAVDN 127
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S++L L
Sbjct: 128 LNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKELVDSL 183
>gi|402074537|gb|EJT70046.1| splicing factor U2AF 23 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 209
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 97/158 (61%), Gaps = 12/158 (7%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + N ++ + Q HF+ FYEDL+ EL KYGE+E L +CDN DH++G
Sbjct: 51 MYQ-----NPAHDPK-NRMNESQAQNHFDAFYEDLWCELCKYGELEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C R G+CNF
Sbjct: 105 NVYARFKYEDSAQKACDELNNRWYAARPIYCELSPVTDFREACCRLNSGEGCARAGFCNF 164
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R+L + + R R RS SRS SP
Sbjct: 165 IHRKNPSEELDRELQLSTKKWLKMRGRDERSVSRSPSP 202
>gi|399217872|emb|CCF74759.1| unnamed protein product [Babesia microti strain RI]
Length = 234
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 77/97 (79%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+E + +CDN+ DH++GNVYV++ +E AA A+ +LSGRFY G+ I+V+++PVTDFR
Sbjct: 92 KYGEVEDMIVCDNIGDHIIGNVYVKYSDEMSAANAISTLSGRFYGGKQIMVEYTPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
EA CRQ+ + C RGGYCNFMH+K + R LRR+L +
Sbjct: 152 EARCRQFVDGQCKRGGYCNFMHVKHVPRSLRRKLMNK 188
>gi|403169415|ref|XP_003328862.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167949|gb|EFP84443.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 278
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 84/121 (69%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L ++ +FE FYED+F EL KYG + +++CDN+ DH++GNVY ++ E++A A+ +
Sbjct: 63 LSEAELTSYFETFYEDVFCELVKYGNLLEMHVCDNVGDHLIGNVYARYDWEDEAQIAVDA 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
+ R+YAGRP+ + SPVTDFREA CRQ + CNRGG+CNFMHLK L R+L +
Sbjct: 123 FNQRWYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFCNFMHLKEPRSSLVRELHAQQ 182
Query: 139 R 139
R
Sbjct: 183 R 183
>gi|294877742|ref|XP_002768104.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239870301|gb|EER00822.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 273
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 79/102 (77%)
Query: 25 QEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
QEHFE FYE++F EL YGEIE L + DN+ DHM+GNVYV++ +EE + ++ L+GRFY
Sbjct: 76 QEHFEAFYEEVFLELANYGEIEDLAVVDNIGDHMIGNVYVKYVKEESSEMCIQKLTGRFY 135
Query: 85 AGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI 126
AGR I ++SPVTDF EA CRQ+++ C+RGG+CNF+H K +
Sbjct: 136 AGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 177
>gi|225554163|gb|EEH02527.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
Length = 147
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 92/140 (65%), Gaps = 6/140 (4%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
++P ++Q HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E+ A +A +
Sbjct: 1 MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDA 60
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
L+ R+YA RPI + SPVTDFREA CR C RGG+CN +H K S +L R+L
Sbjct: 61 LNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNLIHRKEPSPELERELELST 120
Query: 135 --FGRYRRRHSRSRSRSRSP 152
+ + R R RS +RS SP
Sbjct: 121 KKWLKMRGRDERSVTRSPSP 140
>gi|94536809|ref|NP_001035515.1| splicing factor U2AF 26 kDa subunit isoform 1 [Homo sapiens]
gi|92090952|gb|AAT72770.3| U2 small nuclear RNA auxiliary factor 1-like 3 splicing variant 1
[Homo sapiens]
Length = 181
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 96/139 (69%), Gaps = 1/139 (0%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE RA+ LS R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRS 149
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++L+RQL+GR RR S R +
Sbjct: 102 HGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLYGRGPRRRSPPRFHT 161
Query: 150 RSPYRHRSHEDRSHSGHGR 168
R R+H HGR
Sbjct: 162 GHHPRERNHRCSPDHWHGR 180
>gi|426388322|ref|XP_004060590.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 181
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGQWAVAELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
V+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++L+RQL+
Sbjct: 102 HVELSPVTDFRESCCRQYEMGECTRGGFCNFMHLQPISQNLQRQLY 147
>gi|393217218|gb|EJD02707.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 231
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 83/116 (71%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L + +QE F+ YEDL+ EL K+G + L++CDN+ DH++GNVY ++ E +A A+ +
Sbjct: 63 LTEKDLQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWEAEAQAAVDN 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S++L L
Sbjct: 123 LNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKELVDSL 178
>gi|328861623|gb|EGG10726.1| hypothetical protein MELLADRAFT_42160 [Melampsora larici-populina
98AG31]
Length = 244
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 84/121 (69%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L ++ +FE FYED+F EL KYG + +++CDN+ DH++GNVY ++ E++A A+ +
Sbjct: 63 LSEAELASYFETFYEDVFCELVKYGNLLEMHVCDNVGDHLIGNVYARYEWEDEAQIAVDA 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
+ R+YAGRP+ + SPVTDFREA CRQ + CNRGG+CNFMHLK L R+L +
Sbjct: 123 FNQRWYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFCNFMHLKEPRSSLVRELHAQQ 182
Query: 139 R 139
R
Sbjct: 183 R 183
>gi|297276805|ref|XP_001112161.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Macaca
mulatta]
Length = 181
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CD+L DH+VGNVYV+FR EE A RA+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS++LRRQ++
Sbjct: 102 HAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVY 147
>gi|225680499|gb|EEH18783.1| splicing factor U2af 38 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 209
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 7/149 (4%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++ ++Q HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDTK-NKMNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A + +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 114 DSAQQGCDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPE 173
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L ++L + + R R RS +RS SP
Sbjct: 174 LEKELELSTKKWLKMRGRDERSVTRSPSP 202
>gi|398408734|ref|XP_003855832.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
gi|339475717|gb|EGP90808.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
Length = 209
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 90/140 (64%), Gaps = 6/140 (4%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
+ P ++Q HF+ FY+D + E+ K+GE+E + +CDN DH++GNVY +F+ E+ A +A
Sbjct: 63 MTPSQLQNHFDAFYDDFWCEMCKFGELEEVVVCDNNNDHLIGNVYARFKYEDAAQKACDE 122
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S DL ++L
Sbjct: 123 LNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPDLEKELELAT 182
Query: 135 --FGRYRRRHSRSRSRSRSP 152
R R R RS +RS SP
Sbjct: 183 KKHLRIRGRDERSVTRSPSP 202
>gi|444509612|gb|ELV09368.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 252
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 88/112 (78%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L + Q+H+E+F++++F E+ +YGE+E +N+CDNL DH+VGNVYV+F EE A +AL +
Sbjct: 69 LSEAETQQHYEEFFQEVFTEMEEYGEVEEMNVCDNLGDHLVGNVYVKFGREEDAEKALVA 128
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
++ R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+L
Sbjct: 129 VNSRWFHGQPIHAELSPVTDFREACCRQYETGACARGGFCNFMHLKPISREL 180
>gi|321262008|ref|XP_003195723.1| U2 snRNP auxiliary factor small subunit [Cryptococcus gattii WM276]
gi|317462197|gb|ADV23936.1| U2 snRNP auxiliary factor small subunit, putative [Cryptococcus
gattii WM276]
Length = 223
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 84/125 (67%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
PG +G + ++Q F+ FYED F EL KYG ++ + +CDN+ DH++GNVY +F E
Sbjct: 55 PGHTPEGQNMSAEELQADFDRFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYE 114
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+AARA+++L+ R+YA RP+ + SPVTDFRE+ CRQ E C R G+CNFMHL +R
Sbjct: 115 AEAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRS 174
Query: 130 LRRQL 134
L L
Sbjct: 175 LVSAL 179
>gi|58271046|ref|XP_572679.1| splicing factor [Cryptococcus neoformans var. neoformans JEC21]
gi|134114768|ref|XP_773682.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256310|gb|EAL19035.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228938|gb|AAW45372.1| splicing factor, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 223
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 84/125 (67%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
PG +G + ++Q F+ FYED F EL KYG ++ + +CDN+ DH++GNVY +F E
Sbjct: 55 PGHTPEGQNMSAEELQADFDRFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYE 114
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+AARA+++L+ R+YA RP+ + SPVTDFRE+ CRQ E C R G+CNFMHL +R
Sbjct: 115 AEAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRS 174
Query: 130 LRRQL 134
L L
Sbjct: 175 LVSAL 179
>gi|392578781|gb|EIW71908.1| hypothetical protein TREMEDRAFT_58042 [Tremella mesenterica DSM
1558]
Length = 228
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 87/125 (69%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P +G + P ++Q++F++FYED F EL KYG ++ +++CDN+ DH++GNVY ++ E
Sbjct: 55 PAHTPEGQNMTPEQLQQNFDNFYEDFFIELCKYGNLQEMHVCDNVGDHLMGNVYARYEYE 114
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+A++A +L+ ++YA +P++ + SPV+DFREA CRQ E C R G+CNFMHL S+
Sbjct: 115 TEASKACDALNDKWYAMKPLMAELSPVSDFREACCRQNEMGECVREGFCNFMHLCHPSKS 174
Query: 130 LRRQL 134
L L
Sbjct: 175 LVSSL 179
>gi|405122366|gb|AFR97133.1| splicing factor [Cryptococcus neoformans var. grubii H99]
Length = 223
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 84/125 (67%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
PG +G + ++Q F+ FYED F EL KYG ++ + +CDN+ DH++GNVY +F E
Sbjct: 55 PGHTPEGQNMSAEELQADFDRFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYE 114
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+AARA+++L+ R+YA RP+ + SPVTDFRE+ CRQ E C R G+CNFMHL +R
Sbjct: 115 AEAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRS 174
Query: 130 LRRQL 134
L L
Sbjct: 175 LVSAL 179
>gi|358059521|dbj|GAA94678.1| hypothetical protein E5Q_01331 [Mixia osmundae IAM 14324]
Length = 260
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 90/124 (72%), Gaps = 2/124 (1%)
Query: 11 GVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE 70
G+DA +D ++Q+ F+ F+ED++ EL K+G + +++CDN+ DH++GNVY ++ E+
Sbjct: 73 GMDAGAKSVD--QLQDEFDQFFEDVYCELVKFGHLLEMHVCDNVGDHLIGNVYARYDFED 130
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
+A A+ +L+ R++AGRP+ + SPVTDFREATCRQ + C+RGG+CNF HL++ L
Sbjct: 131 EAQTAIDTLNTRWFAGRPLFAELSPVTDFREATCRQNDLGNCDRGGFCNFHHLRKPRAAL 190
Query: 131 RRQL 134
++L
Sbjct: 191 VKEL 194
>gi|145477617|ref|XP_001424831.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391898|emb|CAK57433.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 5/151 (3%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQE---HFEDFYEDLFEELNKYGEIESLNICDNLADH 57
MYQ M A GN + I+E FE+FYED+F +L ++GEIE L +C+N+ DH
Sbjct: 51 MYQNSPM--EVAIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDH 108
Query: 58 MVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY 117
+VGNVYV++ E A +L Y RP+ +++SPV DF A C+QY + TC RGG
Sbjct: 109 LVGNVYVKYTSELFAESCFNALQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGA 168
Query: 118 CNFMHLKRISRDLRRQLFGRYRRRHSRSRSR 148
CN++HLK+IS ++ LF + H R +
Sbjct: 169 CNYLHLKKISTKFKKSLFNQMYEEHPEYREK 199
>gi|164660716|ref|XP_001731481.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
gi|159105381|gb|EDP44267.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
Length = 258
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 86/127 (67%), Gaps = 8/127 (6%)
Query: 17 NP--LDP------RKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFRE 68
NP LDP ++Q+ F+ F+ D F+ L+ YG + +++CDN+ DH++GNVY ++
Sbjct: 53 NPKYLDPDCRASDAELQQQFDAFFSDFFKGLSDYGTLIEMHVCDNVGDHLIGNVYARYET 112
Query: 69 EEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISR 128
E+ A RA+ L+ R+Y RP+ + SPV+DFREA CRQ E N CNRGG CNFMHL+ S
Sbjct: 113 EDDAQRAVDGLNTRWYHQRPLFAELSPVSDFREACCRQNETNECNRGGQCNFMHLRYASP 172
Query: 129 DLRRQLF 135
+L R+L+
Sbjct: 173 ELVRELY 179
>gi|145484545|ref|XP_001428282.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395367|emb|CAK60884.1| unnamed protein product [Paramecium tetraurelia]
Length = 312
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 14 AQGNPLDPRKIQE---HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE 70
A GN + I+E FE+FYED+F +L ++GEIE L +C+N+ DH+VGNVYV++ E
Sbjct: 62 ASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYTSEL 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +L Y RP+ +++SPV DF A C+QY + TC RGG CN++HLK+IS
Sbjct: 122 FAESCFNTLQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKISTKF 181
Query: 131 RRQLFGRYRRRHSRSRSR 148
++ LF + H R +
Sbjct: 182 KKSLFNQMYEEHPEYREK 199
>gi|406603045|emb|CCH45380.1| Splicing factor U2af small subunit A [Wickerhamomyces ciferrii]
Length = 160
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 86/132 (65%), Gaps = 2/132 (1%)
Query: 18 PLDPRKIQE--HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
P P+ QE F+DFY+D+F E + G+I+ L +C+N DH+ GNVYV+F EE A +A
Sbjct: 28 PTIPKDQQEVIKFDDFYKDIFIESSLIGQIDELTVCENHNDHLNGNVYVKFNSEEAATKA 87
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
S R+Y +PI + SPV DFR +TCRQ++ TC+RGG CNFMH+KR SRDL + L
Sbjct: 88 RDLFSTRWYNSKPIYCELSPVVDFRGSTCRQHDSKTCDRGGMCNFMHVKRPSRDLLKTLK 147
Query: 136 GRYRRRHSRSRS 147
R+ + +S
Sbjct: 148 LSQRKYYQEKKS 159
>gi|167526258|ref|XP_001747463.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774298|gb|EDQ87930.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 84/122 (68%), Gaps = 11/122 (9%)
Query: 16 GNPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
G+ L ++QEHF+ FY D+F EL KYG +E +N+CDNL DH+VGNVYV F +E +
Sbjct: 254 GHSLSKGELQEHFDRFYADIFWELEEKYGAVEDMNVCDNLGDHLVGNVYVMFENDEDGEK 313
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
A+ L+ R+Y VTDFREA CRQYE++ C RGG+CNFMHL+++ ++++ L
Sbjct: 314 AVLDLNNRWYG----------VTDFREACCRQYEKSECTRGGFCNFMHLRKLGDNMQKTL 363
Query: 135 FG 136
+G
Sbjct: 364 YG 365
>gi|407044754|gb|EKE42803.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
Length = 227
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 85/120 (70%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
F FYED+F EL K+GEI+ + +C NL++HM GNVYV+FR+E+ A+ A+K L R+YAGR
Sbjct: 76 FNIFYEDIFNELAKHGEIDEMLVCRNLSEHMTGNVYVRFRDEKNASEAMKFLLARYYAGR 135
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 147
I +S VTDF+EA C+QYE C+R G+CNF+H+ + L+R+LF R R R R+
Sbjct: 136 MIQPSYSHVTDFKEARCKQYESGECDRHGFCNFLHVIEPNHSLQRKLFERQPLRQKRIRN 195
>gi|67474354|ref|XP_652926.1| U2 auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56469830|gb|EAL47539.1| U2 auxiliary factor, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709632|gb|EMD48863.1| U2 auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 227
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 85/120 (70%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
F FYED+F EL K+GEI+ + +C NL++HM GNVYV+FR+E+ A+ A+K L R+YAGR
Sbjct: 76 FNIFYEDIFNELAKHGEIDEMLVCRNLSEHMTGNVYVRFRDEKNASEAMKFLLARYYAGR 135
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 147
I +S VTDF+EA C+QYE C+R G+CNF+H+ + L+R+LF R R R R+
Sbjct: 136 MIQPSYSHVTDFKEARCKQYESGECDRHGFCNFLHVIEPNHSLQRKLFERQPLRQKRIRN 195
>gi|390478906|ref|XP_003735604.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Callithrix jacchus]
Length = 283
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 106/174 (60%), Gaps = 25/174 (14%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH++ F E++F EL KYGEIE +N+ DNL DH+VGNVYV+FR EE A RA+ L+
Sbjct: 133 EVQEHYDSF-EEVFTELQEKYGEIEEMNVXDNLGDHLVGNVYVKFRREEDAERAVAELNN 191
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
F G+ + + S VTDFRE+ C QYE C RGG+CNFMHL+ IS++LR + G
Sbjct: 192 XF-NGQAVHAELSHVTDFRESCCCQYEMGECTRGGFCNFMHLRPISQNLRPRSMG---SN 247
Query: 142 HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
+ + RSP RSH+GH R R+RRH SP HR GR
Sbjct: 248 PTLNTPILRSP-------PRSHTGHRPR---------ERNRRH---SPDHRHGR 282
>gi|395851239|ref|XP_003798173.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Otolemur garnettii]
Length = 223
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 82/114 (71%), Gaps = 17/114 (14%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVY +
Sbjct: 73 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVY----------------NN 116
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 117 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 170
>gi|70952191|ref|XP_745280.1| U2 snRNP auxiliary factor, small subunit [Plasmodium chabaudi
chabaudi]
gi|56525554|emb|CAH89145.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 299
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 126/240 (52%), Gaps = 11/240 (4%)
Query: 14 AQGNPLDPRKIQ---EHFEDFYEDLFEELNKYGEIESL-NICDNLADHMVGNVYVQFREE 69
A+G +D + +HFE+FYE++F+EL K EIE +CDN + + E
Sbjct: 62 AEGQMVDDEVLDQAADHFEEFYEEVFDELMK-XEIEDXGXVCDNGDHXYWKCLXLNIHXE 120
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A+K L+GRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYCNFMH+K + R
Sbjct: 121 DYAEKAIKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRT 180
Query: 130 LRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSP 189
++R+L R ++ + +S R D R R Y S R
Sbjct: 181 VKRRLHKRMYKKFPMYKKNRKS----RDDSDGERRHDRYRDRSRRDKYGSSYNSSRRRHR 236
Query: 190 SHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINND 249
S + R + P RE S ERR KIE+WN+ERE + + N D + + ND
Sbjct: 237 SQSSNGNDDDNERSHKHPRRENSSERREKIERWNKEREMKNN--QKNNDENEDTTKVEND 294
>gi|145478691|ref|XP_001425368.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392438|emb|CAK57970.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
Query: 14 AQGNPLDPRKIQE---HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE 70
A GN + I+E FE+FYED+F +L ++GEIE L +C+N+ DH+VGNVYV++ E
Sbjct: 62 ASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYTSEY 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +L Y RP+ +++SPV DF A C+QY + TC RGG CN++HLK+IS
Sbjct: 122 YAEGCFNALQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKISTKF 181
Query: 131 RRQLFGRYRRRH 142
++ LF + H
Sbjct: 182 KKSLFNQMYEEH 193
>gi|440302723|gb|ELP95030.1| splicing factor U2AF 35 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 263
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 84/124 (67%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQA 72
+++G D +K++ F +FYED+F ++ YGE+E +C N DHM+GNVYV++ +EE+A
Sbjct: 62 ESEGLEKDEKKMRHDFNEFYEDVFSQIQNYGEVEEFIVCGNDNDHMMGNVYVKYTKEEEA 121
Query: 73 ARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR 132
+A L+GR+YAG+ + F VTDFREA CRQ E+ TC RGG CNF+H+ L+R
Sbjct: 122 KKAKDELTGRYYAGKMLQPSFCRVTDFREAICRQQEQGTCTRGGQCNFIHVIEPDPSLKR 181
Query: 133 QLFG 136
LF
Sbjct: 182 GLFA 185
>gi|145530874|ref|XP_001451209.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418853|emb|CAK83812.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
Query: 14 AQGNPLDPRKIQE---HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE 70
A GN + I+E FE+FYED+F +L ++GEIE L +C+N+ DH+VGNVYV++ E
Sbjct: 62 ASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYTSEY 121
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +L Y +P+ +++SPV DF A C+QY + TC RGG CN++HLK+I+
Sbjct: 122 YAEGCFNALQNLSYENKPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKIATKF 181
Query: 131 RRQLFGRYRRRH 142
++ LF + H
Sbjct: 182 KKSLFNQMYEEH 193
>gi|167377957|ref|XP_001734607.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165903812|gb|EDR29241.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 227
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 85/120 (70%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
F FYED+F EL K+GE++ + +C NL++HM GNVYV+FR+E+ A+ A+K L R+YAGR
Sbjct: 76 FNIFYEDIFNELAKHGEVDEMLVCGNLSEHMTGNVYVRFRDEKNASEAMKFLLARYYAGR 135
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 147
I +S VTDF+EA C+QYE C+R G+CNF+H+ + L+R+LF R R R ++
Sbjct: 136 MIQPSYSHVTDFKEARCKQYECGECDRHGFCNFLHVIEPNHSLQRKLFERQPLRQKRIKN 195
>gi|50555327|ref|XP_505072.1| YALI0F06292p [Yarrowia lipolytica]
gi|49650942|emb|CAG77879.1| YALI0F06292p [Yarrowia lipolytica CLIB122]
Length = 203
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 85/137 (62%)
Query: 12 VDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
++ G+ + + +HF FYED++ E K G +E + +C+N DH+ GN Y++FR +E
Sbjct: 63 LNEDGSKMTKADLDKHFALFYEDIYMEAAKLGRLEEMIVCENGNDHLTGNTYLRFRNQED 122
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 131
A RA + R+YAGRP+ + SPV DF E+ CRQ++ N C+RG CNFMH KR R L
Sbjct: 123 AQRACDLFNTRWYAGRPVWCELSPVNDFTESCCRQHDTNECSRGNMCNFMHAKRPPRQLA 182
Query: 132 RQLFGRYRRRHSRSRSR 148
+ L R+ ++R R R
Sbjct: 183 KDLDASQRKFYNRQRDR 199
>gi|440802051|gb|ELR22990.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 294
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 85/140 (60%), Gaps = 28/140 (20%)
Query: 7 MITPGVDAQGNPLDPRKIQ----------EHFEDFYEDLFEELNKYGEIESLNICDNLAD 56
M P V A+ P P +Q EHF DF+ED+ +EL +G +E L++CDN +
Sbjct: 23 MYMPPVPAEW-PTSPDDVQAMQKIQRDAEEHFNDFFEDIHDELRNFGRLEDLHVCDNTGE 81
Query: 57 HMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 116
+A+K+L+GRFY GR ++ +FSPVTDFREA CRQY+ N CNRGG
Sbjct: 82 -----------------KAMKALTGRFYGGRLLVPEFSPVTDFREARCRQYDSNECNRGG 124
Query: 117 YCNFMHLKRISRDLRRQLFG 136
CNFMHLK++ +L R+LFG
Sbjct: 125 QCNFMHLKQVDPELERRLFG 144
>gi|226489603|emb|CAX74952.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 123
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 71/88 (80%)
Query: 48 LNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQY 107
+N+CDNL DH+VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFREA CRQY
Sbjct: 1 MNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQY 60
Query: 108 EENTCNRGGYCNFMHLKRISRDLRRQLF 135
E C RGG+CNFMHLK ISR+L R+L+
Sbjct: 61 ELGECTRGGFCNFMHLKPISRELCRKLY 88
>gi|397606182|gb|EJK59239.1| hypothetical protein THAOC_20568 [Thalassiosira oceanica]
Length = 109
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 77/99 (77%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
+D K +E F FYED +EEL+K+G IE+L+ICDNL DHM+G+ Y +F EEE+AA AL
Sbjct: 10 IDEAKAKEDFLSFYEDFYEELSKFGRIEALHICDNLGDHMLGHAYCKFSEEEEAADALNV 69
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY 117
++GR+Y GR + V+FSPV DFREA CR ++E++C RGG+
Sbjct: 70 MNGRYYDGRQMEVEFSPVLDFREARCRDFDEDSCRRGGF 108
>gi|397625258|gb|EJK67720.1| hypothetical protein THAOC_11212 [Thalassiosira oceanica]
Length = 188
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 76/98 (77%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
+D K +E F FYED +EEL+K+G IE+L+ICDNL DHM+G+ Y +F EEE+AA AL
Sbjct: 75 IDEAKAKEDFLSFYEDFYEELSKFGRIEALHICDNLGDHMLGHAYCKFSEEEEAADALNV 134
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 116
++GR+Y GR + V+FSPV DFREA CR ++E++C RGG
Sbjct: 135 MNGRYYDGRQMEVEFSPVLDFREARCRDFDEDSCRRGG 172
>gi|294654416|ref|XP_456476.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
gi|199428865|emb|CAG84428.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
Length = 234
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 82/120 (68%)
Query: 16 GNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
G L+P+++QE+F+ FY+D+F + +GE+ S+ +C+N +H+ GNVYV+F E+ A A
Sbjct: 54 GEELNPKQVQEYFDHFYKDIFLKFALFGEVYSMVVCENDNNHLNGNVYVKFANEDSAYNA 113
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ L+ ++ GRP+ + SPV F +A CR YE +TCNRG +CNFMH+ + + L+ LF
Sbjct: 114 VMLLNQEWFGGRPVHCELSPVESFHDANCRAYESSTCNRGDHCNFMHIHKPTPQLKSSLF 173
>gi|211939918|gb|ACJ13439.1| U2 snRNP auxiliary factor [Amphidinium carterae]
Length = 203
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 25 QEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
Q H E FY++++ EL+ YGE+E + + DN++DHM+GN+YV++ EE A A + LS RFY
Sbjct: 79 QAHCEAFYQEVWLELSSYGEVEDMVVLDNVSDHMLGNIYVRYYREEDAEVAAQKLSNRFY 138
Query: 85 AGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRH 142
R I V++SPV +F EA CR Y E C RGG CNFMH K I + +RR++ H
Sbjct: 139 GTRLIQVEYSPVANFSEARCRTYHETRCARGGLCNFMHTKHIPKAIRRRVVKNMYEEH 196
>gi|344304841|gb|EGW35073.1| hypothetical protein SPAPADRAFT_130696 [Spathaspora passalidarum
NRRL Y-27907]
Length = 251
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 88/152 (57%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
+YQ + T D + L P++IQE F+ FY D+F GEI L +C+N +H+ G
Sbjct: 52 LYQNPKLKTATTDDAEDELTPKQIQEIFDQFYRDIFVHFATTGEISQLVVCENENNHLNG 111
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV+++ E A+ ++K L+ ++ GRP+ + SPV F EA CR YE + C+RG +CN+
Sbjct: 112 NVYVRYKSETDASESMKQLNSEWFNGRPVHCELSPVDSFSEANCRAYETDVCSRGEHCNY 171
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP 152
MH+++ ++ L LF + R + P
Sbjct: 172 MHVRKPTKKLADDLFKAQEKTRLLKRMQELIP 203
>gi|344234071|gb|EGV65941.1| splicing factor U2AF 23 kDa subunit [Candida tenuis ATCC 10573]
Length = 213
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P ++ L+P++I+E+FE+FY+D+F L K EI +L +C+N +H+ GNVY +F+ E
Sbjct: 44 PKLNKNEQDLNPKQIREYFENFYKDVFIRLGKIEEIAALVVCENENNHLNGNVYCRFKNE 103
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
E A RA+ L+ ++ RP+ + SPV F +A CR Y+ N+C+R +CNFMH+ R S +
Sbjct: 104 EGARRAVVELNQEWFGSRPVHCELSPVQSFHDANCRDYDTNSCSR-DHCNFMHVIRPSDE 162
Query: 130 LRRQLFG 136
L RQLF
Sbjct: 163 LERQLFS 169
>gi|150951186|ref|XP_001387460.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23) [Scheffersomyces stipitis CBS 6054]
gi|149388389|gb|EAZ63437.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23), partial [Scheffersomyces stipitis CBS 6054]
Length = 184
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 83/121 (68%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
+G L+P+++Q++F+ F++D+F + GEI+ L +C+N +H+ GNVYV+F+ +++AA
Sbjct: 59 EGEELNPKQLQQNFDQFFKDIFVKFATLGEIKELVVCENENNHLNGNVYVRFKTKQEAAE 118
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
A L+ ++ RP+ + SPV+ F EA CR YE ++C RG +CNFMH++ ++ L L
Sbjct: 119 ATLLLNQEWFNARPVHCELSPVSSFPEANCRAYETSSCTRGDHCNFMHVRHPTQSLVESL 178
Query: 135 F 135
F
Sbjct: 179 F 179
>gi|302307163|ref|NP_983740.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|299788867|gb|AAS51564.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|374106953|gb|AEY95861.1| FADL355Wp [Ashbya gossypii FDAG1]
Length = 192
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSL 79
D + E FE FYED+F E ++GE++ L +C+N DH+ GNVY+++ + A A +L
Sbjct: 38 DLHALTEDFESFYEDVFLEAARFGEVQELIVCENKTDHLNGNVYIRYSTIDAAKAARDAL 97
Query: 80 SGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL-FGRY 138
R+Y RP+ D S VTDFREA C+ YEE TC+RG CNF+H + I + L ++
Sbjct: 98 ITRWYGERPLYCDLSHVTDFREAVCKSYEEGTCDRGEQCNFIHRRIIGYHIANGLMLSQW 157
Query: 139 RRRHSRSRSRS 149
+ RH + RS
Sbjct: 158 KSRHIMPQHRS 168
>gi|260945991|ref|XP_002617293.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
gi|238849147|gb|EEQ38611.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
Length = 258
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 87/138 (63%), Gaps = 6/138 (4%)
Query: 14 AQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAA 73
A+ N + P E F+ FY D++ + GEIE + +C+N H+ GNVYV++ + + A
Sbjct: 75 AEKNKVSP----ESFDQFYADIYTHAAQSGEIEQMVVCENENFHLCGNVYVRYSDTQSAD 130
Query: 74 RALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQ 133
+A+ L+ +Y GRP+ + SPV++F EA CR Y+ N C+RG +CNFMH +R S +LR Q
Sbjct: 131 KAVAQLNQEWYGGRPVYCELSPVSNFAEANCRAYDNNQCSRGDHCNFMHTRRPSSELRAQ 190
Query: 134 LFGRYRRRHSRSRSRSRS 151
L R +R S + ++ R+
Sbjct: 191 L--RQAQRKSLALAKIRA 206
>gi|149056307|gb|EDM07738.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_c
[Rattus norvegicus]
Length = 188
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+
Sbjct: 73 EVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYE 108
R++ G+ + + SPVTDFRE+ CRQYE
Sbjct: 133 RWFNGQAVHAELSPVTDFRESCCRQYE 159
>gi|67482135|ref|XP_656417.1| U2 snRNP auxiliary factor small subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473613|gb|EAL51031.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708944|gb|EMD48310.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 279
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQA 72
D + D +KI F +FYED+F EL YGEI +C N DHM+GNVYV++ EE A
Sbjct: 65 DGEALERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHA 124
Query: 73 ARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR 132
A A K+L+GR+YA + + +F VT+F+EA CRQ + TC RGG CNF+H+ R+L+
Sbjct: 125 AAAKKALTGRYYAKKILTPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLKY 184
Query: 133 QL 134
L
Sbjct: 185 DL 186
>gi|407038759|gb|EKE39293.1| zinc finger c-x8-c-x5-c-x3-h type domain containing protein
[Entamoeba nuttalli P19]
Length = 279
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQA 72
D + D +KI F +FYED+F EL YGEI +C N DHM+GNVYV++ EE A
Sbjct: 65 DGEALERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHA 124
Query: 73 ARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR 132
A A K+L+GR+YA + + +F VT+F+EA CRQ + TC RGG CNF+H+ R+L+
Sbjct: 125 AAAKKALTGRYYAKKILTPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLKY 184
Query: 133 QL 134
L
Sbjct: 185 DL 186
>gi|167396211|ref|XP_001741956.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165893246|gb|EDR21570.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 278
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 13 DAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQA 72
D + D +KI F +FYED+F EL YGEI +C N DHM+GNVYV++ EE A
Sbjct: 64 DGEALERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHA 123
Query: 73 ARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR 132
A A K+L+GR+YA + + +F VT+F+EA CRQ + TC RGG CNF+H+ R+L+
Sbjct: 124 AAAKKALTGRYYAKKILAPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLKY 183
Query: 133 QL 134
L
Sbjct: 184 DL 185
>gi|440295153|gb|ELP88066.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 198
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 80/123 (65%)
Query: 22 RKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
+ +++ F FYED+F EL + GEI+ + +C NL +HM+GNV+V+F + + A A+K L
Sbjct: 70 KVVRDGFNVFYEDVFNELAERGEIDEMIVCANLNEHMLGNVFVRFHDVKGAESAMKILLA 129
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
R+Y GR I +S VTDFR+A C+Q E C RGG+CNF+H+ + L+R+L R R
Sbjct: 130 RYYGGRMIQPSYSHVTDFRDAKCKQQEAGNCERGGFCNFIHVLEPNHALKRKLLERQPLR 189
Query: 142 HSR 144
R
Sbjct: 190 RQR 192
>gi|363756078|ref|XP_003648255.1| hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891455|gb|AET41438.1| Hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
Length = 258
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Query: 17 NPLDPRKIQ-EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
N ++ K+Q E F+ FYED+F E K+GE++ + +C+N DH+ GNVY++F + A A
Sbjct: 99 NDINQVKLQAEDFDFFYEDVFLEAAKFGEVQEIIVCENKTDHLNGNVYIRFSTSDAAKAA 158
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR-QL 134
+ R+Y RP+ D S VTDFREA C+ YEE C RG CNF+H +R+ L L
Sbjct: 159 RDAFVTRWYGERPLYCDLSHVTDFREAVCKSYEEGKCGRGEQCNFIHRRRVDYSLANGLL 218
Query: 135 FGRYRRRH 142
++++RH
Sbjct: 219 LSQWKKRH 226
>gi|354544051|emb|CCE40773.1| hypothetical protein CPAR2_108080 [Candida parapsilosis]
Length = 307
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 77/125 (61%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L ++IQE F+ FY+D+F L GEI L +C+N +H+ GNVYVQF A+ +
Sbjct: 124 LTEKQIQEQFDLFYQDIFIHLGSMGEIYDLVVCENENNHLNGNVYVQFNSASDASLVNTA 183
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
L+ ++ GRP+ D SPV F +A CR Y+ N+C RG CN+MH+++ + L++ L+
Sbjct: 184 LNQEWFNGRPVHSDLSPVDSFPDAHCRAYDTNSCERGEMCNYMHIRQPTTSLKQSLYKAQ 243
Query: 139 RRRHS 143
+ +S
Sbjct: 244 DKMYS 248
>gi|190347807|gb|EDK40149.2| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 126/248 (50%), Gaps = 21/248 (8%)
Query: 22 RKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++IQ+ F+ FY+D+F + + GEI+++ +C+N DH+ GNVYV+F + A + +L+
Sbjct: 47 QQIQQRFDQFYQDVFVYIARIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNE 106
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF---GRY 138
+Y PI + SPV F++A CR Y+ C+RGG+CNFMH++R + +++ L ++
Sbjct: 107 EWYDALPIHCELSPVESFQDANCRAYDAGACSRGGHCNFMHIRRPTPEVKSVLHQAQDKW 166
Query: 139 RRRHSRSRSRSRSPY------RHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHR 192
+ + + P R +++E+R RR + K + + R T S +
Sbjct: 167 KVEKALEKVAPDDPLVVAMRERVKAYEER----EARRKESEKKVTQESEK--RVTEESEK 220
Query: 193 RGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINNDGLM 252
R + R E + +R K E+ + + QE + N G D+ +N +
Sbjct: 221 RVTEENEKKR----VTEENEKVKRVKSEESEKVSKIQETKIESN--GHGEDKSTDNSKIT 274
Query: 253 QNGNGYHS 260
+N G +S
Sbjct: 275 KNEVGTNS 282
>gi|448519331|ref|XP_003868065.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis Co 90-125]
gi|380352404|emb|CCG22630.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis]
Length = 280
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 76/122 (62%)
Query: 22 RKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++IQE F+ FY+D+F L GEI +C+N +H+ GNVYVQF A+ +L+
Sbjct: 98 KQIQEQFDLFYQDIFIHLANMGEIYDFVVCENENNHLNGNVYVQFVSSSDASTVNTTLNQ 157
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR 141
++ GRP+ D SPVTDF +A CR Y+ N+C RG CN+MH+++ S LR L+ +
Sbjct: 158 EWFNGRPVHSDLSPVTDFADARCRAYDTNSCERGEMCNYMHIRQPSPKLRELLYKAQDKM 217
Query: 142 HS 143
+S
Sbjct: 218 YS 219
>gi|146415096|ref|XP_001483518.1| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 126/248 (50%), Gaps = 21/248 (8%)
Query: 22 RKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++IQ+ F+ FY+D+F + + GEI+++ +C+N DH+ GNVYV+F + A + +L+
Sbjct: 47 QQIQQRFDQFYQDVFVYIARIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNE 106
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF---GRY 138
+Y PI + SPV F++A CR Y+ C+RGG+CNFMH++R + +++ L ++
Sbjct: 107 EWYDALPIHCELSPVESFQDANCRAYDAGACSRGGHCNFMHIRRPTPEVKSVLHQAQDKW 166
Query: 139 RRRHSRSRSRSRSPY------RHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHR 192
+ + + P R +++E+R RR + K + + R T S +
Sbjct: 167 KVEKALEKVAPDDPLVVAMRERVKAYEER----EARRKESEKKVTQESEK--RVTEESEK 220
Query: 193 RGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINNDGLM 252
R + R E + +R K E+ + + QE + N G D+ +N +
Sbjct: 221 RVTEENEKKR----VTEENEKVKRVKSEESEKVLKIQETKIESN--GHGEDKSTDNSKIT 274
Query: 253 QNGNGYHS 260
+N G +S
Sbjct: 275 KNEVGTNS 282
>gi|401414385|ref|XP_003871690.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487909|emb|CBZ23153.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 210
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 88/146 (60%), Gaps = 12/146 (8%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
LD + +++HFE FY++++ ++G I L + NL DH++GNVY++F + + A R +K
Sbjct: 60 LDKKYLKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKE 119
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
L G+ ++ + SPVT+F EA C++ EN C RG CN++H+ ++SR L +L
Sbjct: 120 LRGKKLNDVIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKLEKEQ 179
Query: 135 ---FGRYRRRH-----SRSRSRSRSP 152
+ + +RH R RSRSRSP
Sbjct: 180 SKYWKKKEKRHEHDSGDRKRSRSRSP 205
>gi|367009756|ref|XP_003679379.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
gi|359747037|emb|CCE90168.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
Length = 190
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 14/147 (9%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
+Y L + G+D Q FEDFYED++ E ++G + S+ +C+N DH+ G
Sbjct: 55 LYNMLHIPASGLD-----------QSSFEDFYEDVYIEACRFGAVRSMVVCENGNDHLKG 103
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY+ F +A RA+ + R+Y RPI D + + DFR+A CR++++ C RG CNF
Sbjct: 104 NVYLHFEHPNEAQRAMDDFNTRWYDERPIYCDLTHIVDFRDAICRRHDQQACERGDECNF 163
Query: 121 MHLKRISRDLRRQLFGRYRRRHSRSRS 147
MH++R S+ L+ L R + S+SRS
Sbjct: 164 MHIRRPSQGLKIDL---ERSQTSKSRS 187
>gi|258575975|ref|XP_002542169.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
gi|237902435|gb|EEP76836.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
Length = 139
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 27/149 (18%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + N ++P ++Q HF+ FYEDL+ +++GNVY +F+ E
Sbjct: 5 PAFDPK-NKMNPSQLQNHFDAFYEDLW--------------------YLIGNVYARFKYE 43
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 44 DSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAE 103
Query: 130 LRRQL------FGRYRRRHSRSRSRSRSP 152
L R L + + R R RS SRS SP
Sbjct: 104 LERDLELSTKKWLKMRGRDERSASRSPSP 132
>gi|255730555|ref|XP_002550202.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132159|gb|EER31717.1| predicted protein [Candida tropicalis MYA-3404]
Length = 481
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 76/117 (64%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +IQE F+ FY+D+F ++K GEI++L +C+N+ +H+ GNVYVQF ++A+ A K
Sbjct: 313 LTEEEIQEKFDLFYKDVFTHISKLGEIKNLVVCENVNNHLNGNVYVQFVRTQEASEASKQ 372
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
L+ ++ RP+ SPV DF EA C +Y C G CN+MHL+ + DL ++++
Sbjct: 373 LNSEWFNERPVYSTLSPVRDFEEAYCHEYSVGACEHGERCNYMHLRYPTPDLEQKMY 429
>gi|255730573|ref|XP_002550211.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
gi|240132168|gb|EER31726.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
Length = 293
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
Query: 19 LDP--RKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARAL 76
+DP +IQE+F+ FY D+F +++ I L++C+N DH+ GNVYVQF EE A
Sbjct: 125 VDPTEEEIQEYFDQFYADVFVHISQMRPIYKLSVCENQNDHLNGNVYVQFFSEEDAGFVN 184
Query: 77 KSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ L+ ++ RP+ + SPV+DF EA CR Y+ C+RGG CN+MH+++ + +L +LF
Sbjct: 185 RQLNSEWFNERPVYSELSPVSDFEEAHCRAYDNGGCDRGGRCNYMHVRQPTEELFDELF 243
>gi|255715815|ref|XP_002554189.1| KLTH0E16302p [Lachancea thermotolerans]
gi|238935571|emb|CAR23752.1| KLTH0E16302p [Lachancea thermotolerans CBS 6340]
Length = 189
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 75/114 (65%)
Query: 21 PRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLS 80
P Q F+ FYED++ E K+GE++++ +C+N DH+ GNVY+ F A A S +
Sbjct: 65 PEAQQRDFDAFYEDVYMEACKFGELQAMVVCENKNDHLNGNVYLMFTNSRDANSAKDSFN 124
Query: 81 GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
R++ RP+ +FS V+DFREA CR+++ +C RG CNFMH++R +RDL+ L
Sbjct: 125 TRWFNERPLYCEFSHVSDFREAICRKHDMRSCERGDECNFMHVQRPTRDLQSDL 178
>gi|213688747|gb|ACJ53923.1| U2 small nuclear RNA auxiliary factor 1 [Bubalus bubalis]
Length = 110
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 28 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 87
Query: 82 RFYAGRPIIVDFSPVTDFREATC 104
R++ G+PI + SPVTDFREA C
Sbjct: 88 RWFNGQPIHAELSPVTDFREACC 110
>gi|241948859|ref|XP_002417152.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
gi|223640490|emb|CAX44743.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
Length = 374
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+ Q F+ F++D+F ++K+G+I + +C+N +H+ GNVYV F E A A L+
Sbjct: 209 QTQHDFDQFFQDIFVHISKFGQISDIAVCENENNHLAGNVYVMFESPEDAYNANLQLNQE 268
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYE-ENTCNRGGYCNFMHLKRISRDLRRQLF 135
+Y GRP+ + SPV+DF EA C Y + C RG CN+MH++ SRDL + L+
Sbjct: 269 WYNGRPVYSELSPVSDFNEACCEAYSYYHNCERGAMCNYMHIRLPSRDLEQSLY 322
>gi|149244812|ref|XP_001526949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449343|gb|EDK43599.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 295
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
+ + L ++QE + F++D+F L++ GE+ SL +C+N +H+ GNVYV+F E+ A +
Sbjct: 97 ESDELSQLQLQESLDLFFQDVFIHLSQKGEVASLVVCENENNHLNGNVYVRFYSEKDAQQ 156
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
A + L+ ++ GRP+ D SPV F EA CR Y+ N+C RG CN+MHL+ ++ L +L
Sbjct: 157 ANQELNQEWFNGRPVHSDLSPVYSFDEARCRAYDTNSCERGEMCNYMHLRLPTKSLLDKL 216
Query: 135 F-GRYRRRHSRSRSRSRSPYR 154
G+ ++ S+ R ++ R
Sbjct: 217 TQGQEKKYASKRLERLKTELR 237
>gi|196002924|ref|XP_002111329.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
gi|190585228|gb|EDV25296.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
Length = 462
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 20/187 (10%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
++ F +FY D++ E GEI IC N H+ GNVYV+++ EE+ +A + GR+
Sbjct: 207 LRSQFIEFYNDIYPEFQAAGEIREFKICCNYEPHLRGNVYVEYQSEEECHKAFRMFHGRW 266
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL--KRISRDLRRQLFGRYRRR 141
YA R + FSPV +++ A C + + C +G +CNF+H+ +++ R R+ RR
Sbjct: 267 YAQRQLFCQFSPVNNWKSAICGLFRQKRCPKGKHCNFLHVFENPVAQSTRSAFNDRH-RR 325
Query: 142 HSRSRSRSRSPY-----------RHRSHEDRS-----HSGHGRRYDDRDK-YYESRSRRH 184
HS + +RS Y RHR+H+DR H H RR RD Y R
Sbjct: 326 HSFNNNRSVRDYGKIENRSSRSDRHRNHDDRVRRSDWHDRHNRRDRSRDNDNYRHEKRSK 385
Query: 185 RSTSPSH 191
RS SP+H
Sbjct: 386 RSRSPTH 392
>gi|406696973|gb|EKD00243.1| splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 161
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 70/107 (65%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P +G + ++Q F+ FYED F EL KYG ++ +++CDN+ DH+ GNVYV++ E
Sbjct: 55 PSHTPEGLTMTKDELQADFDRFYEDFFIELCKYGNVQEMHVCDNIGDHLEGNVYVRYEWE 114
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 116
+A +A++ L+ R+Y RP+ + SPV+DFREA CRQ E C R G
Sbjct: 115 AEANKAVEQLNNRWYGMRPLHAELSPVSDFREACCRQNELGECKREG 161
>gi|401881081|gb|EJT45386.1| splicing factor [Trichosporon asahii var. asahii CBS 2479]
Length = 128
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 70/107 (65%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P +G + ++Q F+ FYED F EL KYG ++ +++CDN+ DH+ GNVYV++ E
Sbjct: 22 PSHTPEGLTMTKDELQADFDRFYEDFFIELCKYGNVQEMHVCDNIGDHLEGNVYVRYEWE 81
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 116
+A +A++ L+ R+Y RP+ + SPV+DFREA CRQ E C R G
Sbjct: 82 AEANKAVEQLNNRWYGMRPLHAELSPVSDFREACCRQNELGECKREG 128
>gi|389592512|ref|XP_003721697.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
gi|321438230|emb|CBZ11982.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
Length = 210
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 75/116 (64%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
LD + +++HFE FY++++ ++G I L + NL DH++GNVY++F + + A R +K
Sbjct: 60 LDKKYLKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKE 119
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L G+ ++ + SPVT+F EA C++ EN C RG CN++H+ ++SR L +L
Sbjct: 120 LRGKKLNDIIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKL 175
>gi|367000677|ref|XP_003685074.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
gi|357523371|emb|CCE62640.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
Length = 229
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
Query: 10 PGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P N P + ++ YEDL+ EL KYG I + ICDN DH+ GNVYV++ E
Sbjct: 84 PNKPTTKNKSTPPIDDKEYDSIYEDLYIELAKYGRIMEMYICDNGNDHLRGNVYVRYSSE 143
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENT-CNRGGYCNFMHLKRISR 128
+ A A L+ R++ G+PI D + + DF EA CR+ EE + C RG +CNFMH+++ S
Sbjct: 144 QNARDANNELNTRWFNGKPIYCDLTHIHDFGEAICRKPEEKSGCERGDHCNFMHIRKPSP 203
Query: 129 DLRRQLFGRYRRR 141
L+ L R++
Sbjct: 204 QLQTDLENAQRKK 216
>gi|448101861|ref|XP_004199664.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359381086|emb|CCE81545.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 79/121 (65%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
Q D +++Q+HFEDFY+D+F G+++++ +C+N +H+ GNVY++F + A
Sbjct: 58 QAPITDEKELQQHFEDFYKDVFVRAATLGKVDAMVVCENNNNHLNGNVYIKFASRDIAYD 117
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
A+ L+ +Y GRP+ + SPV +A CR Y+ N+C+RG +CNFMH++R S L+ L
Sbjct: 118 AVVKLNQEWYDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFMHIRRPSPGLKSFL 177
Query: 135 F 135
F
Sbjct: 178 F 178
>gi|146075783|ref|XP_001462772.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|398009570|ref|XP_003857984.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
gi|134066852|emb|CAM59993.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|322496188|emb|CBZ31259.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
Length = 210
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 75/116 (64%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
LD + +++HFE FY++++ ++G I L + NL DH++GNVY++F + + A R +K
Sbjct: 60 LDRKYLKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKE 119
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L G+ ++ + SPVT+F EA C++ EN C RG CN++H+ ++SR L +L
Sbjct: 120 LRGKKLNDIIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKL 175
>gi|345315324|ref|XP_001512892.2| PREDICTED: hypothetical protein LOC100082198, partial
[Ornithorhynchus anatinus]
Length = 384
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 34 DLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ + +
Sbjct: 1 EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVSELNNRWFNGQAVQAE 60
Query: 93 FSPVTDFREATCRQYEENTC 112
SPVTDFRE+ CRQYE T
Sbjct: 61 LSPVTDFRESCCRQYEMGTA 80
>gi|390363017|ref|XP_788119.3| PREDICTED: uncharacterized protein LOC583099 [Strongylocentrotus
purpuratus]
Length = 746
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 64/97 (65%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
+F +FYED+ E +YGE+ L +C N H+ GNVYVQ+R EE+AA+A + +GRFY G
Sbjct: 247 NFHEFYEDVLPEFREYGEVVQLKVCRNWEPHLRGNVYVQYRSEEEAAKAAQVFAGRFYGG 306
Query: 87 RPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
+ + + PV+ ++ A C + + C RG +CNF+H+
Sbjct: 307 KQLDPRYCPVSRWKPAICGLFHRDKCPRGKHCNFLHV 343
>gi|123474332|ref|XP_001320349.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903153|gb|EAY08126.1| hypothetical protein TVAG_302130 [Trichomonas vaginalis G3]
Length = 339
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 2 YQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGN 61
Y + ++ P N I+ +F++FY D++EEL +G I + NL +H++GN
Sbjct: 29 YHFMSLLPPDTLIIEN----ETIRNNFDEFYLDVYEELRTFGPISEFVVSGNLCEHLLGN 84
Query: 62 VYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFM 121
V V + E A A +L GR+Y GRPI V FSPV +F A CRQ++E C CNF+
Sbjct: 85 VLVMYENLENALTAYNNLRGRYYGGRPIDVQFSPVVNFNVAVCRQFKEGKCPHNEKCNFI 144
Query: 122 H 122
H
Sbjct: 145 H 145
>gi|448097995|ref|XP_004198814.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359380236|emb|CCE82477.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 77/114 (67%)
Query: 22 RKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
+++Q+HFEDFY+D+F G+++++ +C+N +H+ GNVY++F + A A+ L+
Sbjct: 65 KELQQHFEDFYKDVFVRAATLGKVDAMVVCENNNNHLNGNVYIKFSSRDIAYDAVVKLNQ 124
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+Y GRP+ + SPV +A CR Y+ N+C+RG +CNFMH++R S L+ LF
Sbjct: 125 EWYDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFMHIRRPSPGLKNFLF 178
>gi|342184023|emb|CCC93504.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 234
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 11/158 (6%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
D R +++HFE FY++ + + G I L + NL DH++GNVY++F + +A R ++
Sbjct: 58 FDRRYLRQHFERFYKETWRTFMELGHIAELRVVSNLGDHLLGNVYIRFEDSHEALRVVRE 117
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---F 135
L + ++ + SPVT+F +A C++ E C RG CN++H+ ++SR L +L
Sbjct: 118 LKAKKLNNIVLLPELSPVTNFADACCKEDLEGNCERGSQCNYLHIMKVSRKLMEKLEKEQ 177
Query: 136 GRYRRRH--------SRSRSRSRSPYRHRSHEDRSHSG 165
+YR++ SR R RS+ R R R+H G
Sbjct: 178 AKYRKKKDKHSGSTSSRKRERSKDRGRDRQKSPRAHGG 215
>gi|328352397|emb|CCA38796.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 , RNA-binding motif and
serine/arginine rich protein 2 [Komagataella pastoris
CBS 7435]
Length = 243
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 26 EHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
E F +D+F EL+ YG IE + IC+N H+ GNVY++F +E AA + L+ R+Y
Sbjct: 122 ERFNKLLQDIFVELSLNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWY 181
Query: 85 AGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
GRPI + SPV F EATCR+++ C RG CN+MH+KR + LF
Sbjct: 182 NGRPIYSELSPVRSFEEATCRKHDFGRCERGDMCNYMHIKRAPPTVTNNLF 232
>gi|154331585|ref|XP_001561610.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134058929|emb|CAM36756.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 210
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 75/116 (64%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
LD + +++HFE FY++++ ++G I L + NL DH++GNVY++F + + A+R +
Sbjct: 60 LDKKYLKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVASRIVNE 119
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L G+ ++ + SPVT+F EA C++ E+ C RG CN++H+ ++SR L +L
Sbjct: 120 LRGKKLNAVIVLPELSPVTNFAEACCKEDLESRCQRGEQCNYLHIMKVSRRLLEKL 175
>gi|290993180|ref|XP_002679211.1| predicted protein [Naegleria gruberi]
gi|284092827|gb|EFC46467.1| predicted protein [Naegleria gruberi]
Length = 189
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 7/132 (5%)
Query: 12 VDAQGN--PLDPRKIQEHFEDFYEDLFEEL-NKYG-EIESLNICDNLADHMVGNVYVQFR 67
VD G P I+E FE+FY D+F+EL K G +IE L ICDN +HM GNVY+
Sbjct: 50 VDENGILRPFSQEFIKEWFENFYADIFKELETKNGIKIEDLYICDNTCEHMFGNVYISLA 109
Query: 68 EEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYE---ENTCNRGGYCNFMHLK 124
A + + L G+++AGR + ++SPV DF EA C+ ++ E C +G CN +H+
Sbjct: 110 SIPDAQKCYELLKGKYHAGRLLTPEYSPVLDFSEAKCKLFDRGGEEHCPKGANCNNLHVL 169
Query: 125 RISRDLRRQLFG 136
R S +L + LFG
Sbjct: 170 RPSEELAKHLFG 181
>gi|254567930|ref|XP_002491075.1| hypothetical protein [Komagataella pastoris GS115]
gi|238030872|emb|CAY68795.1| Hypothetical protein PAS_chr2-1_0187 [Komagataella pastoris GS115]
Length = 239
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 26 EHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
E F +D+F EL+ YG IE + IC+N H+ GNVY++F +E AA + L+ R+Y
Sbjct: 118 ERFNKLLQDIFVELSLNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWY 177
Query: 85 AGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
GRPI + SPV F EATCR+++ C RG CN+MH+KR + LF
Sbjct: 178 NGRPIYSELSPVRSFEEATCRKHDFGRCERGDMCNYMHIKRAPPTVTNNLF 228
>gi|238879030|gb|EEQ42668.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 371
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 25 QEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
Q+ F+ F++D+F ++K G+I + +C+N +H+ GNVYV F E A A L+ ++
Sbjct: 208 QKDFDQFFQDIFVHISKLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEWF 267
Query: 85 AGRPIIVDFSPVTDFREATCRQYEE-NTCNRGGYCNFMHLKRISRDLRRQLF 135
G+P+ D SPV DF +A C +Y + + C RG CN+MH++ S D+ L+
Sbjct: 268 NGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSSDIEESLY 319
>gi|68490905|ref|XP_710740.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490926|ref|XP_710731.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431969|gb|EAK91483.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431979|gb|EAK91492.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 371
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 25 QEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
Q+ F+ F++D+F ++K G+I + +C+N +H+ GNVYV F E A A L+ ++
Sbjct: 208 QKDFDQFFQDIFVHISKLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEWF 267
Query: 85 AGRPIIVDFSPVTDFREATCRQYEE-NTCNRGGYCNFMHLKRISRDLRRQLF 135
G+P+ D SPV DF +A C +Y + + C RG CN+MH++ S D+ L+
Sbjct: 268 NGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSSDIEESLY 319
>gi|254576833|ref|XP_002494403.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
gi|238937292|emb|CAR25470.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
Length = 137
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 4/116 (3%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
+DP + F+ YED++ E ++G + S+ IC+N DH+ GNVY+ + E+ A A +
Sbjct: 9 IDP----QDFDALYEDIYMEACRFGPVRSMVICENRNDHLKGNVYLYYEREQDAEDAKNN 64
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
+ R++ RP+ D + V DFREA CR+++ TC RGG CNFMH++R S +R L
Sbjct: 65 FNTRWFDERPLYCDLTHVADFREAVCRKHDLGTCERGGDCNFMHVRRPSTKIRIDL 120
>gi|402872265|ref|XP_003900044.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Papio
anubis]
Length = 485
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 62/102 (60%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
I + F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+
Sbjct: 243 IYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRW 302
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
YAGR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 303 YAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 344
>gi|402872263|ref|XP_003900043.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Papio
anubis]
Length = 500
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 62/102 (60%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
I + F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+
Sbjct: 258 IYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRW 317
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
YAGR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 318 YAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 359
>gi|348554507|ref|XP_003463067.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cavia porcellus]
Length = 490
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 233 QQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 292
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------------ISRDLR 131
GR + +F PVT ++ A C +E C RG +CNF+H+ R +S D
Sbjct: 293 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDLYLSPDRT 352
Query: 132 RQLFGRYRRRHSRS---------RSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSR 182
FG+ R R+ R RSP S++ S RR R K RSR
Sbjct: 353 GSSFGKNLDRGKRAGHHDDYYGRTRRRRSPSPDHSYKRNGESERKRRSGHRGKKAHKRSR 412
Query: 183 ---RHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERR 216
RH S S +R RSRS G S +R GS++ R
Sbjct: 413 SHERHSSRSRGRKRNRSRSRG-----SQMRRGSQKHR 444
>gi|355758818|gb|EHH61525.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 1 [Macaca
fascicularis]
Length = 472
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 62/102 (60%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
I + F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+
Sbjct: 230 IYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRW 289
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
YAGR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 290 YAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 331
>gi|355691520|gb|EHH26705.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
mulatta]
Length = 472
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 62/102 (60%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
I + F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+
Sbjct: 230 IYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRW 289
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
YAGR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 290 YAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 331
>gi|397512928|ref|XP_003826785.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Pan
paniscus]
gi|397512932|ref|XP_003826787.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 3 [Pan
paniscus]
gi|397512934|ref|XP_003826788.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 4 [Pan
paniscus]
gi|410039576|ref|XP_003950650.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pan troglodytes]
Length = 489
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 98/203 (48%), Gaps = 36/203 (17%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 249 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 308
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------ISRDL------- 130
GR + +F PVT ++ A C +E C RG +CNF+H+ R +RD+
Sbjct: 309 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDQT 368
Query: 131 ---------RRQLFGRYRRRHSRSRSRSRSP-----YRHRSHEDRSHSGH-GRRYDDRDK 175
RR+ G + +SR R R R+P Y+ +R S H G++ R
Sbjct: 369 GSSFGKNSERREKMGHHDHYYSRQRGR-RNPSPDHTYKRNGESERKKSSHRGKKSHKR-- 425
Query: 176 YYESRSRRHRSTSPSHRRGRSRS 198
+ R R SPS R R RS
Sbjct: 426 ---TSKSRERHNSPSRGRNRHRS 445
>gi|397512930|ref|XP_003826786.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Pan
paniscus]
Length = 504
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 98/203 (48%), Gaps = 36/203 (17%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 264 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 323
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------ISRDL------- 130
GR + +F PVT ++ A C +E C RG +CNF+H+ R +RD+
Sbjct: 324 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDQT 383
Query: 131 ---------RRQLFGRYRRRHSRSRSRSRSP-----YRHRSHEDRSHSGH-GRRYDDRDK 175
RR+ G + +SR R R R+P Y+ +R S H G++ R
Sbjct: 384 GSSFGKNSERREKMGHHDHYYSRQRGR-RNPSPDHTYKRNGESERKKSSHRGKKSHKR-- 440
Query: 176 YYESRSRRHRSTSPSHRRGRSRS 198
+ R R SPS R R RS
Sbjct: 441 ---TSKSRERHNSPSRGRNRHRS 460
>gi|380804095|gb|AFE73923.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I + F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR
Sbjct: 46 EIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGR 105
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
+YAGR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 106 WYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 148
>gi|257219672|gb|ACV51810.1| ZRSR2Y, partial [Bos taurus]
Length = 445
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I + F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR
Sbjct: 224 EIYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGR 283
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
+YAGR + +F PVT + A C +E C RG YCNF+H+ R
Sbjct: 284 WYAGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCNFLHVFR 326
>gi|1125020|dbj|BAA08532.1| U2AF1-RS1 [Homo sapiens]
Length = 479
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 98/203 (48%), Gaps = 36/203 (17%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 239 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 298
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------ISRDL------- 130
GR + +F PVT ++ A C +E C RG +CNF+H+ R +RD+
Sbjct: 299 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSSDQT 358
Query: 131 ---------RRQLFGRYRRRHSRSRSRSRSP-----YRHRSHEDRSHSGH-GRRYDDRDK 175
RR+ G + +SR R R R+P Y+ +R S H G++ R
Sbjct: 359 GSSFGKNSERREKMGHHDHYYSRQRGR-RNPSPDHTYKRNGESERKKSSHRGKKSHKR-- 415
Query: 176 YYESRSRRHRSTSPSHRRGRSRS 198
+ R R SPS R R RS
Sbjct: 416 ---TSKSRERHNSPSRGRNRHRS 435
>gi|2833265|sp|Q15695.2|U2AFL_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 1
gi|1293653|gb|AAA98669.1| U2AFBPL [Homo sapiens]
Length = 479
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 98/203 (48%), Gaps = 36/203 (17%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 239 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 298
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------ISRDL------- 130
GR + +F PVT ++ A C +E C RG +CNF+H+ R +RD+
Sbjct: 299 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSSDQT 358
Query: 131 ---------RRQLFGRYRRRHSRSRSRSRSP-----YRHRSHEDRSHSGH-GRRYDDRDK 175
RR+ G + +SR R R R+P Y+ +R S H G++ R
Sbjct: 359 GSSFGKNSERREKMGHHDHYYSRQRGR-RNPSPDHTYKRNGESERKKSSHRGKKSHKR-- 415
Query: 176 YYESRSRRHRSTSPSHRRGRSRS 198
+ R R SPS R R RS
Sbjct: 416 ---TSKSRERHNSPSRGRNRHRS 435
>gi|426395275|ref|XP_004063900.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 461
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 98/203 (48%), Gaps = 36/203 (17%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 221 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 280
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------ISRDL------- 130
GR + +F PVT ++ A C +E C RG +CNF+H+ R +RD+
Sbjct: 281 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDQT 340
Query: 131 ---------RRQLFGRYRRRHSRSRSRSRSP-----YRHRSHEDRSHSGH-GRRYDDRDK 175
RR+ G + +SR R R R+P Y+ +R S H G++ R
Sbjct: 341 GSSFGKNSERREKMGHHDHYYSRQRGR-RNPSPDHSYKRNGESERKKSSHRGKKSHKR-- 397
Query: 176 YYESRSRRHRSTSPSHRRGRSRS 198
+ R R SPS R R RS
Sbjct: 398 ---TSKSRERHNSPSRGRNRHRS 417
>gi|358420073|ref|XP_003584415.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 686
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I + F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR
Sbjct: 465 EIYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGR 524
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
+YAGR + +F PVT + A C +E C RG YCNF+H+ R
Sbjct: 525 WYAGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCNFLHVFR 567
>gi|291407124|ref|XP_002719965.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2
[Oryctolagus cuniculus]
Length = 498
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 237 QQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQTALSLFNGRWYA 296
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------ISRDL------- 130
GR + +F PVT ++ A C +E C RG +CNF+H+ R +RDL
Sbjct: 297 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDLYLSPDRT 356
Query: 131 ---------RRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRS 181
RR G + H R R R RSP S++ S RR R K
Sbjct: 357 GSAFGKNSERRDRTGYHDEYHGRLR-RRRSPSADHSYKRNGESERKRRSSHRGK------ 409
Query: 182 RRHRSTSPSHRRGRSRSPG 200
+ H+ TS S R SRS G
Sbjct: 410 KSHKHTSKSCERHSSRSRG 428
>gi|189069316|dbj|BAG36348.1| unnamed protein product [Homo sapiens]
Length = 479
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 98/203 (48%), Gaps = 36/203 (17%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 239 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 298
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------ISRDL------- 130
GR + +F PVT ++ A C +E C RG +CNF+H+ R +RD+
Sbjct: 299 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSSDQT 358
Query: 131 ---------RRQLFGRYRRRHSRSRSRSRSP-----YRHRSHEDRSHSGH-GRRYDDRDK 175
RR+ G + +SR R R R+P Y+ +R S H G++ R
Sbjct: 359 GSSFGKNSERREKMGHHDHYYSRQRGR-RNPSPDHTYKRNGESERKKSSHRGKKSHKR-- 415
Query: 176 YYESRSRRHRSTSPSHRRGRSRS 198
+ R R SPS R R RS
Sbjct: 416 ---TSKSRERHNSPSRGRNRHRS 435
>gi|355757207|gb|EHH60732.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
fascicularis]
Length = 467
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 221 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 280
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 281 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 320
>gi|403255704|ref|XP_003920552.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Saimiri boliviensis
boliviensis]
Length = 464
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 224 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 283
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRS 145
GR + +F PVT ++ A C +E C RG +CNF+H+ R + F R S
Sbjct: 284 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNN----EFWEANRDIYLS 339
Query: 146 RSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSH 191
R+ S + S E R GH D+YY SR R R+ SP H
Sbjct: 340 PDRTGSSFGKNS-ERRERMGH------HDEYY-SRLRGRRNPSPDH 377
>gi|441598673|ref|XP_004087475.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
gi|441598677|ref|XP_004087476.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
Length = 492
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 249 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 308
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 309 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 348
>gi|296234985|ref|XP_002762699.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Callithrix jacchus]
Length = 474
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRS 145
GR + +F PVT ++ A C +E C RG +CNF+H+ R + F R S
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNN----EFWEANRDIYLS 349
Query: 146 RSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSH 191
R+ S + S E R GH D+YY SR R R+ SP H
Sbjct: 350 PDRTGSSFGKNS-ERRERMGH------HDEYY-SRLRGRRNPSPDH 387
>gi|395736068|ref|XP_002815836.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pongo abelii]
Length = 489
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 249 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 308
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 309 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 348
>gi|332223957|ref|XP_003261134.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Nomascus
leucogenys]
Length = 478
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 333
>gi|332221469|ref|XP_003259883.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 5 [Nomascus
leucogenys]
Length = 507
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 264 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 323
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 324 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 363
>gi|156537789|ref|XP_001608048.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Nasonia vitripennis]
Length = 721
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSL 79
D R+ + HF DFY D+ EL K+G+I++L C N H+ GN+YV++ E +AARAL+ L
Sbjct: 230 DHRETRNHFRDFYFDVVPELEKFGKIKTLQYCKNTEAHLRGNLYVEYATEREAARALRGL 289
Query: 80 SGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR+YAGR + +F + +R A C C +G CNF+H+ R
Sbjct: 290 KGRWYAGRQLHCEFVNLKSWRGAICGMMR---CPKGSACNFLHVFR 332
>gi|297303397|ref|XP_001116975.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Macaca mulatta]
Length = 479
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 233 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 292
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 293 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 332
>gi|332860349|ref|XP_003317416.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Pan
troglodytes]
Length = 482
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRS 145
GR + +F PVT ++ A C +E C RG +CNF+H+ R + F R S
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNN----EFWEANRDIYLS 349
Query: 146 RSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSH 191
R+ S + S E R GH +DD Y SR R R+ SP H
Sbjct: 350 PDRTGSSFGKNS-ERRERMGH---HDD----YYSRLRGRRNPSPDH 387
>gi|402909571|ref|XP_003917490.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Papio anubis]
Length = 480
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 333
>gi|119619307|gb|EAW98901.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_b
[Homo sapiens]
Length = 446
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 231 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 290
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 291 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 330
>gi|4827046|ref|NP_005080.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Homo sapiens]
gi|2833266|sp|Q15696.2|U2AFM_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=Renal carcinoma antigen
NY-REN-20; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|1808582|dbj|BAA08533.1| U2AF1-RS2 [Homo sapiens]
gi|109731267|gb|AAI13455.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|109731281|gb|AAI13481.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|119619306|gb|EAW98900.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_a
[Homo sapiens]
gi|313883686|gb|ADR83329.1| zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [synthetic construct]
Length = 482
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 333
>gi|332860347|ref|XP_520951.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Pan
troglodytes]
Length = 478
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 333
>gi|297709488|ref|XP_002831462.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pongo abelii]
Length = 478
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 333
>gi|127797587|gb|AAH50451.2| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
Length = 482
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 333
>gi|332223959|ref|XP_003261135.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Nomascus
leucogenys]
Length = 482
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 333
>gi|156838866|ref|XP_001643131.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113726|gb|EDO15273.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 190
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 68/107 (63%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
F+ +YED+F EL K+G+I+S I +N DH+ GNVY + A A SL+ R+Y +
Sbjct: 70 FDGYYEDVFIELCKFGKIKSFLITENGNDHLRGNVYALYDNVRSAKEARDSLNTRWYNEK 129
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
P+ D + + DF +A CR+Y+ +C+RG CNFMH++R S L+ L
Sbjct: 130 PLYSDLTHIVDFNDAICRKYDVGSCDRGNECNFMHVRRPSPSLKSDL 176
>gi|402585483|gb|EJW79423.1| U2 snRNP splicing factor small subunit, partial [Wuchereria
bancrofti]
Length = 160
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 23 KIQEHFEDFYEDLFEELNK-YGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
K Q F++F+ +++ E+++ YGEI+ +N+CDN +HM+GNVY++F E A+ A+K+L+
Sbjct: 73 KEQREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNASNAVKALNN 132
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYE 108
R++ G+PI + SPV+DFR+A CRQYE
Sbjct: 133 RWFNGKPIHCELSPVSDFRDACCRQYE 159
>gi|380804933|gb|AFE74342.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 49 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 108
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 109 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 148
>gi|426395277|ref|XP_004063901.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 295
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 51 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 110
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 111 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 150
>gi|119619308|gb|EAW98902.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_c
[Homo sapiens]
Length = 344
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 96 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 155
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRS 145
GR + +F PVT ++ A C +E C RG +CNF+H+ R + F R S
Sbjct: 156 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNN----EFWEANRDIYLS 211
Query: 146 RSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSH 191
R+ S + S E R GH D YY SR R R+ SP H
Sbjct: 212 PDRTGSSFGKNS-ERRERMGH------HDDYY-SRLRGRRNPSPDH 249
>gi|327268246|ref|XP_003218909.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Anolis carolinensis]
Length = 487
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I + F DFYED+ E G++ + N H+ GNVYVQ++ E++ AL +GR
Sbjct: 260 EIYQQFLDFYEDVLPEFKNVGKVVQFKVSCNFEPHLRGNVYVQYQSEQECQEALTLFNGR 319
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
+YAGR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 320 WYAGRQLQCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHVFR 362
>gi|444707445|gb|ELW48720.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Tupaia chinensis]
Length = 612
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 363 QQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 422
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 423 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 462
>gi|407410372|gb|EKF32829.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
gi|407410375|gb|EKF32830.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
Length = 233
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 24/173 (13%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
D + ++ HFE FY++ + + G I L + NL DH++GNVY++F E +A+ +
Sbjct: 58 FDRKYLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAAEASHIARE 117
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
L + ++ + SPVT+F +A C++ E C RG CN++H+ ++SR L +L
Sbjct: 118 LKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEKEQ 177
Query: 135 --FGRYRRRHS------------RSRSRSRSPYRHRSHEDRSH----SGHGRR 169
+ + + +HS R R RSRSP H S D H SGH R
Sbjct: 178 AKYWKKKEKHSRGGDRKRERSKDRGRDRSRSPRPHPS--DLCHICGKSGHISR 228
>gi|395821701|ref|XP_003784175.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 482
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 229 QQFLDFYDDVLPEFKNVGKVIKFKVSCNLEPHLRGNVYVQYQSEEECQTALSVFNGRWYA 288
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRS 145
GR + +F PVT ++ A C +E C RG +CNF+H + R+ + + R +
Sbjct: 289 GRQLQCEFCPVTRWKMAICGLFEIKQCPRGRHCNFLH---VFRNPNNEFWEADRDVYLSP 345
Query: 146 RSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRR 193
R S +S E R +GH D+YY RR S PS++R
Sbjct: 346 DRRGSS--LGKSLERRERTGH------HDEYYGRLRRRSPSPDPSYKR 385
>gi|410978386|ref|XP_003995574.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Felis catus]
Length = 468
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + N H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 234 QQFLDFYDDVLPEFRSVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRS 145
GR + +F PVT ++ A C +E C RG +CNF+H+ R + F R S
Sbjct: 294 GRQLRCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNN----EFWEANRDIFLS 349
Query: 146 RSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRS 196
R+ S + + S + R +GH +D+YY R R RS SPSH RS
Sbjct: 350 PDRTGSSFGNGS-DRRERTGH------QDEYY-WRPGRRRSPSPSHSYERS 392
>gi|194227695|ref|XP_001490095.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Equus caballus]
Length = 470
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 232 QQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQTALSLFNGRWYA 291
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 292 GRQLQCEFCPVTQWKMAICGLFEIQQCPRGKHCNFLHVFR 331
>gi|326913598|ref|XP_003203123.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Meleagris gallopavo]
Length = 473
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 86/174 (49%), Gaps = 29/174 (16%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F +FYED+ E G++ + N H+ GNVYVQ++ E+ AL SGR+YA
Sbjct: 235 QQFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQTEKDCQAALALFSGRWYA 294
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------ISRDLRRQLFGR 137
GR + +F PVT ++ A C +E C RG +CNF+H+ + +RD+R
Sbjct: 295 GRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHVFKNPNNEFWEANRDIR------ 348
Query: 138 YRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSH 191
S R+ ++ E R+ S H RD YY RSRR S SP H
Sbjct: 349 --------VSPERTNQLSKNSERRNRSSH------RDDYY-GRSRRRGSPSPDH 387
>gi|335305731|ref|XP_001926829.3| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Sus
scrofa]
Length = 485
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 241 QQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALALFNGRWYA 300
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 301 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 340
>gi|241948837|ref|XP_002417141.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
gi|223640479|emb|CAX44731.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
Length = 372
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L +I++ F+ FY+D+F + K G+I + +C+N +H+ G+VYV+F + E A A
Sbjct: 202 LTDEQIRKDFDLFYQDIFVHIAKLGQINDMAVCEN-ENHLSGHVYVKFNDYEDAYNANLQ 260
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
L+ +Y GRPI + SPV +A C ++ CNRG CN++H+K+ ++ +++ L+
Sbjct: 261 LNQEWYNGRPIYSELSPVNSISDAHCSAWDHGHCNRGATCNYLHVKQPTQGMKKSLYDSQ 320
Query: 139 RRRHSRSR 146
+ ++ R
Sbjct: 321 SKSYTLKR 328
>gi|395841461|ref|XP_003793555.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 491
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 33/205 (16%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + N H+ GNVYVQ++ EE+ A +GR+YA
Sbjct: 233 QQFLDFYDDVLPEFKNVGKVIQFKVSCNWEPHLRGNVYVQYQTEEECQTAFSLFNGRWYA 292
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------ISRDL------- 130
GR + +F PVT ++ A C +E C RG +CNF+H+ R +RD+
Sbjct: 293 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDRT 352
Query: 131 ---------RRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRS 181
RR+ G + + R R RS SP DRS+ +G R + E +S
Sbjct: 353 GSSFGKNLERRERTGHHDEYYGRLRRRSPSP-------DRSYKRNGESERKRRSHREKKS 405
Query: 182 RRHRSTSPSHRRGRSRSPGGRRYHS 206
+H TS S R S + G +R HS
Sbjct: 406 HKH--TSKSCERHSSGNRGRKRDHS 428
>gi|407849824|gb|EKG04420.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 24/173 (13%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
D + ++ HFE FY++ + + G I L + NL DH++GNVY++F E A+ +
Sbjct: 58 FDRKYLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIARE 117
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
L + ++ + SPVT+F +A C++ E C RG CN++H+ ++SR L +L
Sbjct: 118 LKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEKEQ 177
Query: 135 --FGRYRRRHSRS------------RSRSRSPYRHRSHEDRSH----SGHGRR 169
+ + + +HSR R RSRSP H S D H SGH R
Sbjct: 178 AKYWKKKEKHSRVSDRKRERSKDRGRERSRSPRPHPS--DLCHICGKSGHISR 228
>gi|397467387|ref|XP_003805402.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pan paniscus]
Length = 478
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ A +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAFSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 333
>gi|410988239|ref|XP_004000394.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Felis catus]
Length = 519
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 288 QQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 347
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 348 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 387
>gi|354479997|ref|XP_003502195.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Cricetulus griseus]
gi|344244263|gb|EGW00367.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Cricetulus griseus]
Length = 427
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 224 QQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 283
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C YE C +G +CNF+H+ R
Sbjct: 284 GRQLQCEFCPVTRWKIAICGLYEMQKCPKGKHCNFLHVFR 323
>gi|21616732|gb|AAM66350.1|AF499017_1 U2 splicing auxiliary factor [Trypanosoma cruzi]
Length = 233
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 24/173 (13%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
D + ++ HFE FY++ + + G I L + NL DH++GNVY++F E A+ +
Sbjct: 58 FDRKYLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIARE 117
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
L + ++ + SPVT+F +A C++ E C RG CN++H+ ++SR L +L
Sbjct: 118 LKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIVKVSRKLMEKLEKEQ 177
Query: 135 --FGRYRRRHS------------RSRSRSRSPYRHRSHEDRSH----SGHGRR 169
+ + + +HS R R RSRSP H S D H SGH R
Sbjct: 178 AKYWKKKEKHSRGSDRKRERSKDRGRERSRSPRPHPS--DLCHICGKSGHISR 228
>gi|71399405|ref|XP_802775.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|71657119|ref|XP_817079.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|70864869|gb|EAN81329.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
gi|70882249|gb|EAN95228.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 24/173 (13%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
D + ++ HFE FY++ + + G I L + NL DH++GNVY++F E A+ +
Sbjct: 58 FDRKYLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIARE 117
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL---- 134
L + ++ + SPVT+F +A C++ E C RG CN++H+ ++SR L +L
Sbjct: 118 LKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEKEQ 177
Query: 135 --FGRYRRRHS------------RSRSRSRSPYRHRSHEDRSH----SGHGRR 169
+ + + +HS R R RSRSP H S D H SGH R
Sbjct: 178 AKYWKKKEKHSRGSDRKRERSKDRGRERSRSPRPHPS--DLCHICGKSGHISR 228
>gi|426257963|ref|XP_004023719.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2-like
[Ovis aries]
Length = 502
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 262 QQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 321
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 322 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 361
>gi|431899712|gb|ELK07664.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 449
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ +E+ AL +GR+YA
Sbjct: 217 QQFLDFYEDVLPEFRNVGKVVQFKVSCNLEPHLRGNVYVQYQSKEECQAALSLFNGRWYA 276
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 277 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 316
>gi|380804633|gb|AFE74192.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 199
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 49 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 108
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 109 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 148
>gi|355731037|gb|AES10395.1| zinc finger , RNA-binding motif and serine/arginine rich 2 [Mustela
putorius furo]
Length = 463
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 233 QQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 292
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 293 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 332
>gi|358420032|ref|XP_003584397.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
gi|359082042|ref|XP_003588252.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
Length = 477
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 237 QQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 296
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 297 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 336
>gi|281340363|gb|EFB15947.1| hypothetical protein PANDA_020065 [Ailuropoda melanoleuca]
Length = 398
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 167 QQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 226
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 227 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 266
>gi|301788732|ref|XP_002929785.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ailuropoda
melanoleuca]
Length = 464
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 233 QQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 292
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 293 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 332
>gi|343958430|dbj|BAK63070.1| signal recognition particle 19kDa [Pan troglodytes]
Length = 310
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR++A
Sbjct: 70 QQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWHA 129
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 130 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 169
>gi|358375412|dbj|GAA91994.1| splicing factor U2AF 23 kDa subunit [Aspergillus kawachii IFO 4308]
Length = 184
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 37/158 (23%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
MYQ P D + ++P ++Q HF+ FYED++ E+ KYGE+E L +CDN DH++G
Sbjct: 51 MYQ-----NPAYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIG 104
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVY +F+ EE A A +L+ R G C RGG+CNF
Sbjct: 105 NVYARFKYEEDAQAACDALNSRCGEG-------------------------CVRGGFCNF 139
Query: 121 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 152
+H K S +L R L + + R R +RS SRS SP
Sbjct: 140 IHRKDPSNELDRDLRLSTKKWLKERGRDARSVSRSPSP 177
>gi|396082086|gb|AFN83698.1| U2 small nuclear RNA auxillary factor [Encephalitozoon romaleae
SJ-2008]
Length = 259
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
+ LD +Q H + FYED F E++ KYG + L I N + ++GN+Y++F +E+ + R
Sbjct: 51 SKLDNEAVQIHLDLFYEDWFSEVSMKYGAVRMLAIASNSSLQLLGNIYIEFEDEKASLRC 110
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
++ + R+Y+G+ I+V+ + C YE+ C +G C F+H+ +++ L +LF
Sbjct: 111 IEDIGKRYYSGKRIVVELGNCYRISDGVCTDYEKGLCGKGERCGFIHVAKVTESLMEELF 170
Query: 136 GRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 195
+++ S + ++ + +G G+R + RS + S +R R
Sbjct: 171 ASQELLYTQMDSMGKC----KTSDGGKVTGQGKRAE--------RSVEDGNNSGDYRMSR 218
Query: 196 SRSPGGRRYHSPVREGS 212
R G VRE S
Sbjct: 219 RRLGGQGDCIKRVREAS 235
>gi|6755917|ref|NP_035793.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Mus musculus]
gi|2842676|sp|Q64707.1|U2AFL_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=SP2; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
1
gi|12044258|gb|AAG47771.1|AF309654_1 U2AF small subunit-related protein [Mus musculus]
gi|544778|gb|AAB29564.1| SP2=U2 small nuclear ribonucleoprotein auxiliary factor small
subunit homolog [mice, brain, Peptide, 428 aa]
gi|575893|dbj|BAA04230.1| SP2 [Mus musculus]
gi|1468962|dbj|BAA05486.1| U2AF small subunit-related protein [Mus musculus]
gi|22255349|dbj|BAC07536.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) related
protein [Mus musculus]
gi|124376102|gb|AAI32556.1| Zrsr1 protein [Mus musculus]
gi|148675928|gb|EDL07875.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 1 [Mus musculus]
gi|223460302|gb|AAI38595.1| Zrsr1 protein [Mus musculus]
Length = 428
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 225 QQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 284
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C +G +CNF+H+ R
Sbjct: 285 GRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHVFR 324
>gi|546061|gb|AAB30301.1| human U2af35 homolog [Mus musculus]
Length = 428
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 225 QQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 284
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C +G +CNF+H+ R
Sbjct: 285 GRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHVFR 324
>gi|26326547|dbj|BAC27017.1| unnamed protein product [Mus musculus]
Length = 428
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 225 QQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 284
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C +G +CNF+H+ R
Sbjct: 285 GRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHVFR 324
>gi|62945360|ref|NP_001017504.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Rattus norvegicus]
gi|55778495|gb|AAH86322.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
1 [Rattus norvegicus]
Length = 428
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 226 QQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 285
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C +G +CNF+H+ R
Sbjct: 286 GRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHVFR 325
>gi|395837998|ref|XP_003791914.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Otolemur garnettii]
Length = 493
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ A +GR+YA
Sbjct: 233 QQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQTEEECQTAFSLFNGRWYA 292
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 293 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 332
>gi|345327120|ref|XP_001515642.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ornithorhynchus
anatinus]
Length = 466
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + N H+ GNVYVQ++ EE+ A +GR+YA
Sbjct: 233 QQFLDFYEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQEAFSLFNGRWYA 292
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------------ISRDLR 131
GR + +F PVT ++ A C +E C RG +CNF+H+ R +S D
Sbjct: 293 GRQLQCEFCPVTRWKMAICGLFERQKCPRGKHCNFLHVFRNPNNEFWEANRDIHMSPDRT 352
Query: 132 RQLFGRYRRRHSR 144
Q FGR R R
Sbjct: 353 SQSFGRSSERRDR 365
>gi|350595997|ref|XP_003360579.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Sus scrofa]
Length = 407
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 205 QQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYA 264
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + + PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 265 GRQLQCEICPVTQWKMAICGLFEIQQCPRGKHCNFLHVFR 304
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
D + F FY+D+ E GE+ +C N H+ GNVYVQ+ E++ ++A+
Sbjct: 89 FDEKDAYADFLSFYDDVLGEFRALGEVIQFKVCCNWEPHLRGNVYVQYNSEDECSKAISM 148
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
+GR+YAG+ + + P+T ++ A C + + C +G +CNF+H+
Sbjct: 149 FNGRYYAGKQLTCLYCPITKWKSAICGLFAKKRCPKGKHCNFLHV 193
>gi|351696721|gb|EHA99639.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Heterocephalus glaber]
Length = 511
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 254 QQFLDFYHDVVPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECHAALSLFNGRWYA 313
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 314 GRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 353
>gi|148708819|gb|EDL40766.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 2 [Mus musculus]
Length = 498
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I + F DFY D+ E G++ + NL H+ GNVYVQ++ EE A +GR
Sbjct: 192 EIYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGR 251
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS----RDLRRQLF 135
+YAGR + +F PVT ++ A C +E C RG +CNF+H+ R RD R L+
Sbjct: 252 WYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHVFRNPNNEYRDANRDLY 308
>gi|238879039|gb|EEQ42677.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 377
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 11 GVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE 70
G+D L +IQ+ F+ FY+D+F + K G+I + +C+N +H+ G+VY++F +
Sbjct: 201 GLDENHPVLTDEQIQKDFDLFYQDIFVHVAKLGQINDMAVCEN-ENHLSGHVYIKFNDYN 259
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A A L+ +Y G+P+ + SPV +A C+ ++ C+RG CN++H+K+ ++ +
Sbjct: 260 DAIAANLQLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQPTQGI 319
Query: 131 RRQLFGRYRRRHSRSR 146
++ L+ + ++ +
Sbjct: 320 KKSLWDSQTKTYTLKK 335
>gi|121949800|ref|NP_033479.2| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 isoform 1 [Mus musculus]
gi|162319138|gb|AAI56405.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
gi|225000398|gb|AAI72696.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
Length = 541
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I + F DFY D+ E G++ + NL H+ GNVYVQ++ EE A +GR
Sbjct: 235 EIYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGR 294
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS----RDLRRQLF 135
+YAGR + +F PVT ++ A C +E C RG +CNF+H+ R RD R L+
Sbjct: 295 WYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHVFRNPNNEYRDANRDLY 351
>gi|193788564|ref|NP_001123327.1| zinc finger protein ZF(C3H)-13 [Ciona intestinalis]
gi|93003114|tpd|FAA00140.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 479
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
+ E FE FY+D+F E NK+G +E L +C N H+ GNVYVQ+ QA A +SL+GRF
Sbjct: 277 LYEDFEVFYDDVFPEFNKFGHVEQLKVCCNRDQHLRGNVYVQYATVSQAETAFQSLNGRF 336
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEEN-TCNRGGYCNFMHL 123
Y G+ + + + + A C Y C RGG+CNF+H+
Sbjct: 337 YGGKLLQCMYVTILSWSSAICGLYCTGRPCPRGGHCNFLHV 377
>gi|432851674|ref|XP_004067028.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Oryzias latipes]
Length = 591
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
+ E F +FY D+ E G++ +C N H+ GNVY+QF ++Q AL +GR+
Sbjct: 237 LHESFLEFYHDVLPEFKSVGKVVQFKVCCNYEPHLKGNVYIQFETDDQCKEALMKFNGRW 296
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
YAGR + + SPVT ++ A C ++ C +G +CNF+H+ R
Sbjct: 297 YAGRQLQCEISPVTRWKNAICGLFDRRKCPKGKHCNFLHVFR 338
>gi|68490634|ref|XP_710864.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490659|ref|XP_710852.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432105|gb|EAK91608.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432119|gb|EAK91621.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 377
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 11 GVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE 70
G+D L +IQ+ F+ FY+D+F + K G+I + +C+N +H+ G+VY++F +
Sbjct: 201 GLDENHPVLTDEQIQKDFDLFYQDIFVHVAKLGQINDMAVCEN-ENHLSGHVYIKFNDYN 259
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A A L+ +Y G+P+ + SPV +A C+ ++ C+RG CN++H+K+ ++ +
Sbjct: 260 DAIAANLQLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQPTQGI 319
Query: 131 RRQLFGRYRRRHSRSR 146
++ L+ + ++ +
Sbjct: 320 KKSLWDSQTKTYTLKK 335
>gi|2842648|sp|Q62377.1|U2AFM_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|927659|dbj|BAA08143.1| U2af1-rs2 [Mus musculus]
Length = 462
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I + F DFY D+ E G++ + NL H+ GNVYVQ++ EE A +GR
Sbjct: 235 EIYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGR 294
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIS----RDLRRQLF 135
+YAGR + +F PVT ++ A C +E C RG +CNF+H+ R RD R L+
Sbjct: 295 WYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHVFRNPNNEYRDANRDLY 351
>gi|354498940|ref|XP_003511570.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cricetulus griseus]
Length = 537
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE A +GR+YA
Sbjct: 282 QQFLDFYHDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSLFNGRWYA 341
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 342 GRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHVFR 381
>gi|340056926|emb|CCC51265.1| putative U2 splicing auxiliary factor [Trypanosoma vivax Y486]
Length = 239
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 67/111 (60%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
++ HFE FY++ + + G I L + NL DH++GNVY++F E AAR ++ L +
Sbjct: 63 LRRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEESSDAARIVRELKAKK 122
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
++ + SPVT+F +A C++ E C RG CN++H+ ++SR L +L
Sbjct: 123 LNEIILLPEISPVTNFADACCKEDLEGKCERGTQCNYLHIMKVSRKLMDKL 173
>gi|205688456|sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I++ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A S++GR
Sbjct: 222 EIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGR 281
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
++AG+ I +F VT ++ A C +Y + TC+RG CNF+H R
Sbjct: 282 YFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIHCFR 327
>gi|449483114|ref|XP_002194245.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Taeniopygia guttata]
Length = 644
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F +FYED+ E G++ + N H+ GNVYVQ++ E+ AL SGR+YA
Sbjct: 406 QQFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQSEKDCQAALALFSGRWYA 465
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
GR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 466 GRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 503
>gi|431909774|gb|ELK12920.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 461
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE--QAARALKSLSGRF 83
+ F DFYED+ E G++ + N+ H+ GNVYVQ++ EE QAAR+L +GR+
Sbjct: 229 QQFLDFYEDVLPEFRNVGKVVQFKVSCNMEPHLRGNVYVQYQSEEECQAARSL--FNGRW 286
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
YAGR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 287 YAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFR 328
>gi|71747034|ref|XP_822572.1| U2 splicing auxiliary factor [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832240|gb|EAN77744.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332325|emb|CBH15319.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei
gambiense DAL972]
Length = 247
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 67/111 (60%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
++ HFE FY++ + + G I L + NL DH++GNVY++F + A+R ++ L +
Sbjct: 63 LRRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEDSHDASRIVRELKAKK 122
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
++ + SPVT+F EA C++ E C RG CN++H+ ++SR L +L
Sbjct: 123 LNDIVLLPELSPVTNFAEACCKEDLEGKCERGPQCNYLHIMKVSRKLMEKL 173
>gi|449270924|gb|EMC81567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Columba livia]
Length = 453
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F +FYED+ E G++ + N H+ GNVYVQ++ E+ AL SGR+YA
Sbjct: 221 QQFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQSEKDCQAALALFSGRWYA 280
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL-KRISRDL 130
GR + +F PVT ++ A C +E C RG +CNF+H+ K S DL
Sbjct: 281 GRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHVFKNPSNDL 326
>gi|218190979|gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
Length = 731
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I++ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A S++GR
Sbjct: 275 EIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGR 334
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
++AG+ I +F VT ++ A C +Y + TC+RG CNF+H R
Sbjct: 335 YFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIHCFR 380
>gi|293350806|ref|XP_001067753.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
gi|293362880|ref|XP_217612.5| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
Length = 541
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE A +GR+YA
Sbjct: 234 QQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 294 GRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHVFR 333
>gi|222623064|gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I++ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A S++GR
Sbjct: 179 EIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGR 238
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
++AG+ I +F VT ++ A C +Y + TC+RG CNF+H R
Sbjct: 239 YFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIHCFR 284
>gi|301617734|ref|XP_002938300.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Xenopus (Silurana)
tropicalis]
Length = 529
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
I + F +FY D+ E G++ + N H+ GNVYVQ++ EE+ +A +GR+
Sbjct: 221 IYQQFLEFYADVVPEFKNAGKVVQFKVSCNFEPHLRGNVYVQYQTEEECLKAFTQFNGRW 280
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
YA R + +FSPVT ++ A C +E C RG +CNF+H+
Sbjct: 281 YASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV 320
>gi|189525066|ref|XP_001920562.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Danio rerio]
Length = 635
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
++ + F DFYED E G + + N H+ GNVYVQ+ EEQ A +GR
Sbjct: 244 ELHQQFLDFYEDALPEFKNAGRVVQFKVSCNFEPHLRGNVYVQYETEEQCKEAFVMFNGR 303
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
+YAGR + +FSPVT ++ A C ++ C +G +CNF+H+ R
Sbjct: 304 WYAGRQLQCEFSPVTRWKTAICGLFDRRKCPKGKHCNFLHVFR 346
>gi|344288699|ref|XP_003416084.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 532
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F +FY+D+ E G++ + N H+ GNVYVQ++ EE+ AL +GR+YA
Sbjct: 283 QQFLEFYDDVLPEFRNVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAALSVFNGRWYA 342
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 343 GRQLQCEFCPVTRWQMAICGLFETQQCPRGKHCNFLHVFR 382
>gi|307200055|gb|EFN80401.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Harpegnathos saltator]
Length = 490
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+HF +FYED+ EL YG+I L C N H+ GN+YV+++ E +A RA K L+GR+YA
Sbjct: 236 QHFREFYEDVITELESYGKISVLRCCCNTETHLRGNLYVEYQTEREATRAWKRLNGRWYA 295
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 129
G+ + +F + +R A C + C +G CNF+H R R+
Sbjct: 296 GKQLRCEFVNLISWRNAICGM---SKCPKGTACNFLHTFRNPRN 336
>gi|363728701|ref|XP_425572.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Gallus gallus]
Length = 473
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F +FYED+ E G++ + N H+ GNVYVQ++ E+ AL SGR+YA
Sbjct: 235 QQFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQTEKDCQAALALFSGRWYA 294
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
GR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 295 GRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 332
>gi|149035842|gb|EDL90509.1| similar to U2af1-rs2 (predicted) [Rattus norvegicus]
Length = 337
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE A +GR+YA
Sbjct: 30 QQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWYA 89
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A C +E C RG +CNF+H+ R
Sbjct: 90 GRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHVFR 129
>gi|334346699|ref|XP_001380936.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Monodelphis
domestica]
Length = 466
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + N H+ GNVYVQ++ EE+ A +GR+YA
Sbjct: 233 QQFLDFYEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAAFSLFNGRWYA 292
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +FSPVT ++ A C + C RG +CNF+H+ R
Sbjct: 293 GRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCNFLHVFR 332
>gi|340374312|ref|XP_003385682.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Amphimedon
queenslandica]
Length = 466
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Query: 16 GNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
G +D + + F++FY+D+F E K+GE+ + N H+ GN+YVQ+ EE A A
Sbjct: 161 GLEMDDEDMLKDFKEFYQDVFPEFEKFGEVVQFKVSCNYESHLRGNLYVQYSTEEACAAA 220
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQY--EENTCNRGGYCNFMHL 123
+K +GR+YAG+ + ++ PV ++ A C ++ + + C +G +CNF+H+
Sbjct: 221 IKQFNGRYYAGKQLSCEYCPVEKWKTAICGEFLKQGSQCPKGKHCNFLHV 270
>gi|449330260|gb|AGE96520.1| u2 snrnp auxiliary factor small subunit [Encephalitozoon cuniculi]
Length = 254
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
+ L +Q H + FYED F EL+ KYG I L I N ++GN+Y++F EEE A R
Sbjct: 51 STLGEESVQIHLDLFYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRC 110
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ + R+Y G+ I+ + + TC ++E C +G C F+H R+SR L +L
Sbjct: 111 AEEIGRRYYGGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKCGFIHAARVSRSLVEELL 170
Query: 136 GRYRRRHSRSRSRSR 150
+ R+ +R
Sbjct: 171 ASQALLYPRTSDANR 185
>gi|85014399|ref|XP_955695.1| U2 small nuclear RNA auxillary factor [Encephalitozoon cuniculi
GB-M1]
gi|19171389|emb|CAD27114.1| U2 snRNP AUXILIARY FACTOR SMALL SUBUNIT (SPLICING FACTOR U2AF)
[Encephalitozoon cuniculi GB-M1]
Length = 254
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
+ L +Q H + FYED F EL+ KYG I L I N ++GN+Y++F EEE A R
Sbjct: 51 STLGEESVQIHLDLFYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRC 110
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
+ + R+Y G+ I+ + + TC ++E C +G C F+H R+SR L +L
Sbjct: 111 AEEIGRRYYGGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKCGFIHAARVSRSLVEELL 170
Query: 136 GRYRRRHSRSRSRSR 150
+ R+ +R
Sbjct: 171 ASQALLYPRTSDANR 185
>gi|395526914|ref|XP_003765599.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Sarcophilus harrisii]
Length = 470
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F DFYED+ E G++ + N H+ GNVYVQ++ EE+ A +GR+YA
Sbjct: 234 QQFLDFYEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAAFSLFNGRWYA 293
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +FSPVT ++ A C + C RG +CNF+H+ R
Sbjct: 294 GRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCNFLHVFR 333
>gi|255573856|ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 857
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+++ +E+FYED+ E KYGEI + +C N + H+ GNVYVQ++ + A A S++GR
Sbjct: 274 EVERSYEEFYEDVHTEFLKYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAYCSINGR 333
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
++AG+ + +F VT ++ A C +Y ++ C+RG CNF+H R
Sbjct: 334 YFAGKQVNCEFVNVTRWKVAICGEYMKSRLQMCSRGTACNFIHCFR 379
>gi|348541563|ref|XP_003458256.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Oreochromis
niloticus]
Length = 595
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 61/103 (59%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
++QE F +FY D+ E G++ + N H+ GNVYVQF EEQ A +GR
Sbjct: 237 EMQESFLEFYHDVLPEFKSVGKVLQFKVSCNYEPHLRGNVYVQFDTEEQCKEAFIKFNGR 296
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
+YAGR + + SPVT ++ A C ++ + C +G +CNF+H+ R
Sbjct: 297 WYAGRQLHCEISPVTRWKNAICGLFDRHRCPKGKHCNFLHVFR 339
>gi|401828573|ref|XP_003888000.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
gi|392999008|gb|AFM99019.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
Length = 257
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Query: 19 LDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALK 77
L +Q H + FYED F E++ KYG + L I N++ ++GN+Y++F EE A R ++
Sbjct: 53 LSKDAVQIHLDLFYEDWFSEMSVKYGAVRMLAIASNISPQLLGNIYIEFEEERAALRCME 112
Query: 78 SLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
+ R+Y G+ I+V+ + C +E++ C +G C F+H+ + + L +L
Sbjct: 113 EIGKRYYCGKRIVVELGNCYRISDGVCTDHEKDLCAKGERCGFIHVAKATASLVEELLAS 172
Query: 138 YRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYD-DRDKYYESRSRRHRSTSPSHRRGRS 196
R +++ S ++ R+ +++ G D +R + Y + RR S + R
Sbjct: 173 QRLLYTQIGSMGKNRPDERNITSQANWVEGSLRDGNRIENYHADRRRLESQENAKR--SK 230
Query: 197 RSPGGR 202
R P GR
Sbjct: 231 RMPTGR 236
>gi|359392832|gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays]
Length = 790
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
+G +I++ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A
Sbjct: 306 EGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALL 365
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
A S++GR++AG+ I +F VT ++ A C +Y + TC+ G CNF+H R
Sbjct: 366 AYSSMNGRYFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGVACNFIHCFR 419
>gi|363543273|ref|NP_001241852.1| RGH3 splicing factor [Zea mays]
gi|330470888|gb|AEC32092.1| RGH3 splicing factor [Zea mays]
gi|356609668|gb|AET25330.1| RGH3/ZmURP alpha protein isoform [Zea mays]
gi|359392836|gb|AEV45825.1| rough endosperm 3 alpha isoform [Zea mays]
Length = 755
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
+G +I++ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A
Sbjct: 271 EGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALL 330
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
A S++GR++AG+ I +F VT ++ A C +Y + TC+ G CNF+H R
Sbjct: 331 AYSSMNGRYFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGVACNFIHCFR 384
>gi|15218489|ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
gi|229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 5;
Short=AtC3H5
gi|332190444|gb|AEE28565.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
Length = 757
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
+E+FYED+ E KYGE+ + +C N + H+ GNVYV +R E A A +S++GR++AG+
Sbjct: 304 YEEFYEDVHTEFLKYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGK 363
Query: 88 PIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
+ +F ++ ++ A C +Y ++ TC+RG CNF+H R
Sbjct: 364 QVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIHCFR 404
>gi|326523703|dbj|BAJ93022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I++ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A S++GR
Sbjct: 6 EIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKALDSALLAYNSMNGR 65
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
++AG+ I +F +T ++ A C +Y + TC+ G CNF+H R
Sbjct: 66 YFAGKQITCEFVALTKWKSAICGEYMRSRFKTCSHGVACNFIHCFR 111
>gi|357142577|ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Brachypodium distachyon]
Length = 748
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
++++ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A S++GR
Sbjct: 265 EVEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYNSMNGR 324
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
++AG+ I +F VT ++ A C +Y + TC+ G CNF+H R
Sbjct: 325 YFAGKQITCEFVAVTKWKAAICGEYMRSRFKTCSHGVACNFIHCFR 370
>gi|344288487|ref|XP_003415981.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 489
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F +FY+D+ E G++ + N H+ GNVYVQ++ EE+ A +GR+YA
Sbjct: 220 QQFLEFYDDVLPEFKNVGKVIQFKVSCNSEPHLRGNVYVQYQSEEECQAAHSLFNGRWYA 279
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
GR + +F PVT ++ A CR +E C RG +CNF+H+ R
Sbjct: 280 GRQLQCEFCPVTRWQMAICRVFETQQCPRGKHCNFLHVFR 319
>gi|383865202|ref|XP_003708064.1| PREDICTED: uncharacterized protein LOC100879762 [Megachile
rotundata]
Length = 620
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
++HF +FY+D+ EL +G I++L C N H+ GN+YV++ E +AARAL+ L GR+
Sbjct: 236 TRQHFREFYKDVVPELESFGRIKTLKYCCNTEIHLRGNLYVEYYTEREAARALRRLKGRW 295
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMH 122
YAGR + +F + +R A C + C +G CNF+H
Sbjct: 296 YAGRQLNCEFVNLKSWRSAVCGM---SKCPKGRACNFLH 331
>gi|297849356|ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338401|gb|EFH68818.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
Length = 772
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
+E+FYED+ E KYGE+ + +C N + H+ GNVYV +R E A A +S++GR++AG+
Sbjct: 304 YEEFYEDVHTEFLKYGELINFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGK 363
Query: 88 PIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
+ +F ++ ++ A C +Y ++ TC+RG CNF+H R
Sbjct: 364 QVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIHCFR 404
>gi|410912868|ref|XP_003969911.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Takifugu rubripes]
gi|4741995|gb|AAD28792.1|AF146688_1 U2 small nuclear ribonucleoprotein auxiliary factor subunit-related
protein [Takifugu rubripes]
Length = 605
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 87/186 (46%), Gaps = 29/186 (15%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
++ E F +FY D+ E G++ + N H+ GNVYVQF EEQ A +GR
Sbjct: 233 ELYESFLEFYHDVLPEFKSVGKVLQFKVSCNHEPHLRGNVYVQFETEEQCKEAFIKFNGR 292
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--------ISRDLR--- 131
+YAGR + + PVT ++ A C ++ C +G +CNF+H+ R RDL
Sbjct: 293 WYAGRQLHCEMCPVTRWKNAICGLFDRQKCPKGKHCNFLHVFRNPGKEFWEADRDLHMSP 352
Query: 132 -RQLFGRYRR-RHSR------SRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRR 183
R + G R RHS R SRSP RS H RR DR + SRSR
Sbjct: 353 DRSVRGSQRDGRHSERYGDRWQRRCSRSP-------PRSERSHSRRAGDR---WSSRSRE 402
Query: 184 HRSTSP 189
+ P
Sbjct: 403 SAMSHP 408
>gi|15988329|pdb|1JMT|A Chain A, X-Ray Structure Of A Core U2af65U2AF35 HETERODIMER
Length = 104
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 23 KIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
++QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+
Sbjct: 31 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 90
Query: 82 RFYAGRPIIVDFSP 95
R++ G+PI + SP
Sbjct: 91 RWFNGQPIHAELSP 104
>gi|140053486|gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliary factor small
subunit [Medicago truncatula]
Length = 584
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
++ FE+FYED+ E K+GEI + +C N + H+ GNVYVQ++ + A A S++GR+
Sbjct: 9 VERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNSVNGRY 68
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
+AG+ + F +T ++ A C +Y ++ TC+ G CNF+H R
Sbjct: 69 FAGKQVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIHCFR 113
>gi|449680951|ref|XP_002158120.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Hydra
magnipapillata]
Length = 403
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSL 79
D + FE FY+D+ E G + C N H+ GNVYVQ+++ A RALK
Sbjct: 112 DEVDLIHEFEKFYDDVIGEFRAAGTVVMFKCCQNYVPHLRGNVYVQYQDHNGALRALKMF 171
Query: 80 SGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL-----------KRISR 128
+GR+YAGR + V+ SPVT+++ + C +++ C RG CNF+H+ R
Sbjct: 172 NGRWYAGRQLSVELSPVTNWKSSICGLFDKRLCPRGKACNFLHVFRNPGNAYSVPNRTDF 231
Query: 129 DLRRQL-FGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDK--YYESRSRRHR 185
D R G Y + + Y R SG+G R +D K Y +S + HR
Sbjct: 232 DPERATKTGGYDPKFVNPNHPVFAYYSKRD------SGYGYRREDALKHDYSKSSTSSHR 285
Query: 186 STS 188
++
Sbjct: 286 RSA 288
>gi|332026662|gb|EGI66771.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Acromyrmex echinatior]
Length = 478
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
HF +FYED+ EL +G I++L C N H+ GNVYV++ E +AARA ++L GR+YAG
Sbjct: 239 HFYEFYEDVITELESFGRIKTLKCCCNKEIHLRGNVYVEYYTEREAARAWRNLKGRWYAG 298
Query: 87 RPIIVDFSPVTDFREATCRQYEENTCNRGG-YCNFMH 122
+ + +F T +R A C N C +G +CNF+H
Sbjct: 299 KQLNCEFVNFTSWRGAVCGI---NKCPKGSKFCNFLH 332
>gi|328789326|ref|XP_392139.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Apis mellifera]
Length = 455
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+HF +FY+D+ EL +G I++L C N H+ GN+YV++ E +AARAL+ L GR+YA
Sbjct: 238 QHFREFYKDVVPELESFGRIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRWYA 297
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMH 122
GR + +F + +R A C + C +G CNF+H
Sbjct: 298 GRQLNCEFVNLKSWRSAVCGM---SKCPKGRACNFLH 331
>gi|380019200|ref|XP_003693502.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Apis florea]
Length = 459
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+HF +FY+D+ EL +G I++L C N H+ GN+YV++ E +AARAL+ L GR+YA
Sbjct: 238 QHFREFYKDVVPELESFGRIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRWYA 297
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMH 122
GR + +F + +R A C + C +G CNF+H
Sbjct: 298 GRQLNCEFVNLKSWRSAVCGM---SKCPKGRACNFLH 331
>gi|357445231|ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355481941|gb|AES63144.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 1146
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+++ FE+FYED+ E K+GEI + +C N + H+ GNVYVQ++ + A A S++GR
Sbjct: 10 EVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNSVNGR 69
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
++AG+ + F +T ++ A C +Y ++ TC+ G CNF+H R
Sbjct: 70 YFAGKQVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIHCFR 115
>gi|350422847|ref|XP_003493303.1| PREDICTED: hypothetical protein LOC100742355 [Bombus impatiens]
Length = 638
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+HF +FY+D+ EL +G+I++L C N H+ GN+YV++ E +AARAL+ L GR+YA
Sbjct: 247 QHFREFYKDVVPELESFGKIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRWYA 306
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMH 122
GR + +F + +R A C + C +G CNF+H
Sbjct: 307 GRQLNCEFVNLRSWRSAVCGM---SKCPKGRACNFLH 340
>gi|340715501|ref|XP_003396250.1| PREDICTED: hypothetical protein LOC100645560 [Bombus terrestris]
Length = 629
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+HF +FY+D+ EL +G I++L C N H+ GN+YV++ E +AARAL+ L GR+YA
Sbjct: 238 QHFREFYKDVVPELESFGRIKTLKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRWYA 297
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMH 122
GR + +F + +R A C + C +G CNF+H
Sbjct: 298 GRQLNCEFVNLRSWRSAVCGM---SKCPKGRACNFLH 331
>gi|260796659|ref|XP_002593322.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
gi|229278546|gb|EEN49333.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
Length = 571
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
F +FY D E G + +C N H+ GNVYVQ+ EE A++ GRFYAG+
Sbjct: 194 FIEFYNDTLPEFRTLGRVVQFKVCCNHEPHLRGNVYVQYEREEDCLEAIRKFHGRFYAGK 253
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
+ + +PVT ++ A C + C +G +CNF+H+
Sbjct: 254 QLTCEMTPVTSWKSAICGLFSRKRCPKGKHCNFLHV 289
>gi|297739459|emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 17 NPL-DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
NPL +++ +E+FYED+ E K+GEI + +C N + H+ GNVYV ++ + A A
Sbjct: 276 NPLYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLA 335
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
S++G +YAG+ + +F VT ++ A C +Y ++ TC+ G CNF+H R
Sbjct: 336 YHSINGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIHCFR 388
>gi|443697246|gb|ELT97781.1| hypothetical protein CAPTEDRAFT_161525 [Capitella teleta]
Length = 346
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
+ HF +FYED+ E G + +C N H+ GNVY+Q+ E A R L + +GR+
Sbjct: 28 VMRHFREFYEDVTPEFRALGRLVQFKVCCNYEPHLRGNVYIQYESESDAERCLSAFNGRW 87
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
YAGR + +S VT ++ A C + C +G CNF+H+
Sbjct: 88 YAGRQLSCQYSAVTQWKNAICGLFSRKKCPKGRACNFLHV 127
>gi|224129496|ref|XP_002328731.1| predicted protein [Populus trichocarpa]
gi|222839029|gb|EEE77380.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+++ +E+FYED+ E KYGEI + +C N + H+ GNVYV ++ + A A S++GR
Sbjct: 22 EVECSYEEFYEDVHTEFLKYGEIVNFKVCKNGSFHLRGNVYVHYKSLDSAILAYHSINGR 81
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
++AG+ + +F +T ++ A C ++ ++ TC+ G CNF+H R
Sbjct: 82 YFAGKQVKCEFINLTRWKVAICGEFMKSRLKTCSHGSACNFIHCFR 127
>gi|449432946|ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
Length = 867
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
+G +++ +E+FY+D+ E KYGEI + +C N + H+ GN+YV ++ + A
Sbjct: 266 EGLEFTDEEVERCYEEFYDDVHTEFLKYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVL 325
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
A + +GRFYAG+ II +F VT ++ A C ++ + TC+ G CNF+H R
Sbjct: 326 AYNANNGRFYAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIHCFR 379
>gi|356528629|ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 587
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+++ FE+FYED+ E K+GEI + +C N + H+ GNVYVQ++ + A A +++GR
Sbjct: 231 EVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKSLDSALLAYNTVNGR 290
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
++AG+ + F +T ++ A C +Y ++ TC+ G CNF+H R
Sbjct: 291 YFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTTCNFIHCFR 336
>gi|449478305|ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Cucumis sativus]
Length = 838
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
+G +++ +E+FY+D+ E KYGEI + +C N + H+ GN+YV ++ + A
Sbjct: 266 EGLEFTDEEVERCYEEFYDDVHTEFLKYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVL 325
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
A + +GRFYAG+ II +F VT ++ A C ++ + TC+ G CNF+H R
Sbjct: 326 AYNANNGRFYAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIHCFR 379
>gi|225465261|ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+++ +E+FYED+ E K+GEI + +C N + H+ GNVYV ++ + A A S++G
Sbjct: 259 EVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHSINGL 318
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
+YAG+ + +F VT ++ A C +Y ++ TC+ G CNF+H R
Sbjct: 319 YYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIHCFR 364
>gi|322795207|gb|EFZ18029.1| hypothetical protein SINV_09275 [Solenopsis invicta]
Length = 470
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 114/209 (54%), Gaps = 17/209 (8%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+HF +F+ED+ EL +G I+ + C N+ H+ GN+YV++ E +AARA ++L GR+Y
Sbjct: 230 QHFYEFFEDVITELESFGRIKVIKCCRNMEVHLRGNLYVEYYTEREAARAWRNLKGRWYG 289
Query: 86 GRPIIVDFSPVTDFREATCRQYEENTCNRGG-YCNFMHLKRISRDLRRQLFGRYRRRHSR 144
G+ + +F + + A C + C +G YCNF+H + RY + +
Sbjct: 290 GKRLHCEFVNLISWGGAICGIAQ---CPKGTKYCNFLH-------TFKNPCNRYDIKKPQ 339
Query: 145 SRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHR-STSPSHRRGRSRSPGGRR 203
R+ ++ +++ ++ RS G+ +++ D+ R+R R S SP GR++ +
Sbjct: 340 -RTNTKDSFKNPNNSKRSEHGNKSNWEEFDRDDGERNRNWRWSESPETELGRAKDSETKH 398
Query: 204 YHSPVREGSEERRAKIEQWNREREQQEEA 232
+HS R ++R + ++++R+R Q+ +A
Sbjct: 399 HHSTKR----DKRERSKRFSRDRSQRRDA 423
>gi|356555094|ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 518
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+++ FE+FYED+ E K+GE+ + +C N + H GNVYVQ++ + A A S++GR
Sbjct: 242 EVERCFEEFYEDVHTEFLKFGEVVNFKVCKNGSFHWRGNVYVQYKSLDSALLAYNSVNGR 301
Query: 83 FYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 125
++AG+ + F +T ++ A C +Y ++ TC+ G CNF+H R
Sbjct: 302 YFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTACNFIHCFR 347
>gi|270006539|gb|EFA02987.1| hypothetical protein TcasGA2_TC010403 [Tribolium castaneum]
Length = 347
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 57/97 (58%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
HF+DF+ D+ E+ ++G I +C N H+ GNVYV++ +A ++ + +GR+Y G
Sbjct: 229 HFKDFFFDVLPEMERFGRIRQFKVCCNRESHLRGNVYVEYSTTREAVKSFQVFNGRWYGG 288
Query: 87 RPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
R + V+F + ++ A C + C +G CNF+H+
Sbjct: 289 RQLSVEFCNIESWKSAICGLHSRKKCPKGSSCNFLHV 325
>gi|123474570|ref|XP_001320467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903273|gb|EAY08244.1| hypothetical protein TVAG_404120 [Trichomonas vaginalis G3]
Length = 225
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%)
Query: 22 RKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSG 81
R +Q + F+ D++ E ++G ++ + I NL +H+ GNVYV+F E ++A K+L G
Sbjct: 85 RNLQSMIDSFFLDVYAEFKQFGNVQDIVIASNLTEHLYGNVYVRFNEPDEALACHKALQG 144
Query: 82 RFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGR 137
RFYAGR + C + C G C ++H +ISRD+ Q F R
Sbjct: 145 RFYAGRKVTSSLIFFDKLSSLICVSKQSGKCFHGQCCPYVHPLQISRDVFNQAFPR 200
>gi|156379393|ref|XP_001631442.1| predicted protein [Nematostella vectensis]
gi|156218482|gb|EDO39379.1| predicted protein [Nematostella vectensis]
Length = 361
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
E +E+F+ D+ E K G++ C N H+ GNVYVQF++EE ARA + +GR+YA
Sbjct: 13 ERYEEFFNDVLPEFEKAGKVVQFKACCNYEPHLRGNVYVQFKDEESCARAFAAFNGRWYA 72
Query: 86 GRPIIVDFSPVTDFREATCRQY 107
+ + +FSPVT ++ A C ++
Sbjct: 73 QKQLSCEFSPVTRWKSAICDRF 94
>gi|157128201|ref|XP_001655088.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108872656|gb|EAT36881.1| AAEL011071-PA [Aedes aegypti]
Length = 509
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
Query: 10 PGVDAQGNP---------LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
P +D Q +P D ++ + +F+ D+ EE +G I + N H+ G
Sbjct: 226 PALDHQQHPEYGLDSSIEFDDDELYRSYTEFFMDVIEEFESFGPISGFFVTRNFEPHLRG 285
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQ+ + AA+A + ++GRFYA + + V+F + A C +E + C +G CN+
Sbjct: 286 NVYVQYEKVRDAAKAYQRMNGRFYASKQLRVEFRAPIVWTAAVCGLFERSRCQKGKSCNY 345
Query: 121 MHL 123
+HL
Sbjct: 346 LHL 348
>gi|157141689|ref|XP_001647741.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit
related-protein 2 [Aedes aegypti]
gi|108867907|gb|EAT32409.1| AAEL015434-PA, partial [Aedes aegypti]
Length = 296
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
Query: 10 PGVDAQGNP---------LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
P +D Q +P D ++ + +F+ D+ EE +G I + N H+ G
Sbjct: 11 PALDHQQHPEYGLDSSIEFDDDELYRSYTEFFMDVIEEFESFGPISGFFVTRNFEPHLRG 70
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQ+ + AA+A + ++GRFYA + + V+F + A C +E + C +G CN+
Sbjct: 71 NVYVQYEKVRDAAKAYQRMNGRFYASKQLRVEFRAPIVWTAAVCGLFERSRCQKGKSCNY 130
Query: 121 MHL 123
+HL
Sbjct: 131 LHL 133
>gi|357617275|gb|EHJ70693.1| hypothetical protein KGM_02050 [Danaus plexippus]
Length = 392
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
F++F+ D+ E K+G++ + +C+N H+ GN Y+++ + A A ++L R+Y G+
Sbjct: 225 FKEFFFDILPEFQKFGQVVEIKVCNNFEKHLRGNTYIEYSDVRSAVSAYRALHTRWYGGK 284
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 147
+ + F + + A C C +G CNF+H+ + DL RY +R + S
Sbjct: 285 QLSLQFCRLLSWSSAICGLQVTGRCPKGRACNFLHVFKNPIDLHIAYEKRYSKRQQHTSS 344
Query: 148 RSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRS 198
RS S E S + +R D D + +SR RRH HR RSRS
Sbjct: 345 RSWR--WSESPERESPTSRSKRKD--DGHSKSRERRHY----QHRSPRSRS 387
>gi|432119315|gb|ELK38408.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 121
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 37 EELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 95
+E+ KYGE+E +N+CDNL DH+VGNVYVQFR EE A +A+ L R++ G+PI + SP
Sbjct: 63 DEMEKYGEVEEMNVCDNLRDHLVGNVYVQFRPEEDAEKAVMDLDNRWFNGQPIYAELSP 121
>gi|390478473|ref|XP_003735517.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Callithrix jacchus]
Length = 458
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 34/212 (16%)
Query: 17 NPLDPRKIQE--------HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFRE 68
N DP I E F DFYED+ E G + L + NL H+ GN+YV ++
Sbjct: 215 NDYDPDAILEDSKEETYPQFLDFYEDVLPEFKNVGRVIQLRVSCNLKPHLRGNIYVHYQL 274
Query: 69 EEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR--- 125
E + AL + R+Y G + +F PV ++ A C +E+ G +CNF+ + R
Sbjct: 275 EAEXQAALSLFNKRWYTGPHLQCEFCPVIRWKMAICSSFEKQQHPTGKHCNFLPVFRNPI 334
Query: 126 -----ISRDLRRQL------FGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRD 174
++RD+ L FG+ R R Y+ +R S H +
Sbjct: 335 SEFWEVNRDICLSLNRTASSFGKNSXRRERMGHHDEYSYKRNGESERKRSSHXGK----- 389
Query: 175 KYYESRSRRHRSTSPSHRRGRSRSPGGRRYHS 206
+ H+ TS S R S S G R+HS
Sbjct: 390 -------KSHKHTSVSQERHGSXSRGRNRHHS 414
>gi|123437829|ref|XP_001309706.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121891444|gb|EAX96776.1| hypothetical protein TVAG_216790 [Trichomonas vaginalis G3]
Length = 206
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
+ FY D+F ++G +E + I N D M GNVYV F+E + A A +L+ ++YAGR
Sbjct: 69 DAFYYDIFLMCQRFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLTLNNQYYAGRK 128
Query: 89 IIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRH 142
+ +P++ A C E+ C G CN++H +IS + + F R R +
Sbjct: 129 VECVLTPISRLSNAIC---NESACPYGSTCNYVHPLKISEHITKICFPRSSRVY 179
>gi|307171941|gb|EFN63567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Camponotus floridanus]
Length = 507
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
HF FYED+ + L +G+I++L C N H+ GN+YV++ E +AARA + L G YA
Sbjct: 237 HFRKFYEDVIKILELFGKIKTLKCCCNTELHLRGNLYVEYYTEREAARAWRHLKGYTYAN 296
Query: 87 RPIIVDFSPVTDFREATCRQYEENTCNRGG-YCNFMH 122
+ + +F +T +R+A C C +G CNF+H
Sbjct: 297 KQLNCEFVNLTSWRKAICGM---TKCPKGSKACNFLH 330
>gi|123433241|ref|XP_001308579.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890266|gb|EAX95649.1| hypothetical protein TVAG_045370 [Trichomonas vaginalis G3]
Length = 206
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
+ FY D+F ++G +E + I N D M GNVYV F+E + A A +L+ ++YAGR
Sbjct: 69 DAFYYDIFLMCQRFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLNLNNQYYAGRK 128
Query: 89 IIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRH 142
+ +P++ A C E +C G CN++H +IS + + F R R +
Sbjct: 129 VECVLTPISRLSNAIC---NETSCPYGSTCNYVHPLKISEHITKICFPRSSRVY 179
>gi|123455079|ref|XP_001315287.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897959|gb|EAY03064.1| hypothetical protein TVAG_171620 [Trichomonas vaginalis G3]
Length = 241
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 25 QEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
Q + + F+ D+F ++G IE L +C N D + GN YV + + + A AL +L G++Y
Sbjct: 70 QRYIDAFFLDMFLMCRRFGAIEDLLLCSNTMDCLSGNFYVFYEQSDCARMALTALDGQYY 129
Query: 85 AGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSR 144
AGR + V V + A C+ + C+RG C F+H S L +++ R +
Sbjct: 130 AGRKVHVTLCSVPRYSTALCKSSMKGECSRGNECAFIHALEPSFALYQEVIPRINKLFPS 189
Query: 145 SRSRSRSP 152
+ + P
Sbjct: 190 AFRKPGDP 197
>gi|158299259|ref|XP_319372.4| AGAP010194-PA [Anopheles gambiae str. PEST]
gi|157014279|gb|EAA13785.4| AGAP010194-PA [Anopheles gambiae str. PEST]
Length = 505
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
D ++ + +F+ D+ +E +G + + +C N H+ G+VY+++ AA A
Sbjct: 221 FDEDDLKNSYNEFFRDIIQEFEMFGTVRHIFVCRNSVAHLRGSVYIEYESMRNAAAAYLR 280
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
++GRFYA + + V+F + A C E N C +G CNF+H+
Sbjct: 281 MNGRFYAKKQLHVEFRNTLTWPTAVCGLNEMNRCQKGAGCNFLHI 325
>gi|303390771|ref|XP_003073616.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
gi|303302763|gb|ADM12256.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
Length = 245
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARA 75
+ L IQ H + FYED F EL+ +YG I L I N + ++GN+Y++F EE+ A R
Sbjct: 51 STLSKESIQIHLDLFYEDWFSELSIRYGSIRRLVIASNSSSQLLGNIYIEFEEEKTALRC 110
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLF 135
++ + R+Y+GR I + + C E+ C +G C F+H R+S DL +LF
Sbjct: 111 VEEIGKRYYSGRRIAAELGNCYRIDDGMCTDNEKEKCEKGEKCGFIHSARVSTDLAEELF 170
>gi|441627326|ref|XP_004089246.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Nomascus
leucogenys]
Length = 202
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ LS R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELSNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQY 107
+ V C +
Sbjct: 102 HGNVPEVASATSCICDPF 119
>gi|189237330|ref|XP_973215.2| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 1, related sequence 2 [Tribolium
castaneum]
Length = 337
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
HF+DF+ D+ E+ ++G I +C N H+ GNVYV++ +A ++ + +GR+Y G
Sbjct: 229 HFKDFFFDVLPEMERFGRIRQFKVCCNRESHLRGNVYVEYSTTREAVKSFQVFNGRWYGG 288
Query: 87 RPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
R + V+F + ++ A C G CNF+H+
Sbjct: 289 RQLSVEFCNIESWKSAIC----------GSSCNFLHV 315
>gi|221472666|ref|NP_608857.2| CG3294, isoform A [Drosophila melanogaster]
gi|220901945|gb|AAF50982.3| CG3294, isoform A [Drosophila melanogaster]
Length = 456
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L + ++ +++F+ D+ EEL K+G I + N +H+ G+V+V++ E A RA +
Sbjct: 227 LTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTN 286
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
L GR+YA + + V+FS + +R A C C +G C ++HL
Sbjct: 287 LQGRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNDCGYLHL 331
>gi|167384024|ref|XP_001736783.1| splicing factor U2Af 38 kDa subunit [Entamoeba dispar SAW760]
gi|165900719|gb|EDR26968.1| splicing factor U2Af 38 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 251
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 5 LDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYV 64
+ ++ P V + P+ QE +E F+ DL+ + +G++ + + +N A H+ GNV V
Sbjct: 33 VTILLPHVWPAQQVITPQD-QEQYEHFFFDLYTLCSGFGQVVDMIVSENQAPHLKGNVLV 91
Query: 65 QFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLK 124
+F E AA A+K L G+ ++ + + + D +E+ C+Q++ C + CN++H+
Sbjct: 92 KFATEAMAAEAVKHLQGQLFSSVVLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVL 151
Query: 125 RI 126
I
Sbjct: 152 PI 153
>gi|47230617|emb|CAF99810.1| unnamed protein product [Tetraodon nigroviridis]
Length = 471
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 30/133 (22%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
++ E F +FY D+ E G++ + N H+ GNVYVQF EEQ AL +GR
Sbjct: 220 ELYESFLEFYHDVLPEFKSVGKVLQFKVSCNHEPHLRGNVYVQFGSEEQCKEALIKFNGR 279
Query: 83 FYAGRPIIVDFSPVTDFREATCRQ------------------------------YEENTC 112
+YAGR + + PVT ++ A C Q ++ C
Sbjct: 280 WYAGRQLHCEMCPVTRWKNAICGQLLLSHHIRAHSNVHALDLPLRMCFVFLPGLFDRQKC 339
Query: 113 NRGGYCNFMHLKR 125
+G +CNF+H+ R
Sbjct: 340 PKGKHCNFLHVFR 352
>gi|198475533|ref|XP_001357071.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
gi|198138864|gb|EAL34137.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
Length = 448
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
+G + ++ +++F+ D EL K+G+I + N +H+ G+V+V++ E+ A R
Sbjct: 222 EGLEMTEHDLRSDYDEFFNDAVTELEKFGKIVNFRALRNTLEHLSGHVFVEYANEKCALR 281
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +L GR+YA R + V+FS + +R A C C +G C ++HL R +L
Sbjct: 282 AFINLQGRYYASRRLNVEFSNLHTWRGAVCGLSLTRKCPKGNSCGYLHLFRNPNNL 337
>gi|195159884|ref|XP_002020806.1| GL14474 [Drosophila persimilis]
gi|194117756|gb|EDW39799.1| GL14474 [Drosophila persimilis]
Length = 448
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
+G + ++ +++F+ D EL K+G+I + N +H+ G+V+V++ E+ A R
Sbjct: 222 EGLEMTEHDLRSDYDEFFNDAVTELEKFGKIVNFRALRNTLEHLSGHVFVEYANEKCALR 281
Query: 75 ALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDL 130
A +L GR+YA R + V+FS + +R A C C +G C ++HL R +L
Sbjct: 282 AFINLQGRYYASRRLNVEFSNLHTWRGAVCGLSLTRKCPKGNSCGYLHLFRNPNNL 337
>gi|94536807|ref|NP_659424.2| splicing factor U2AF 26 kDa subunit isoform 2 [Homo sapiens]
gi|261861058|dbj|BAI47051.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE RA+ LS R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQY 107
+ V C +
Sbjct: 102 HGNVPEVASATSCICGPF 119
>gi|281354289|gb|EFB29873.1| hypothetical protein PANDA_009769 [Ailuropoda melanoleuca]
Length = 204
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAV 101
>gi|195576588|ref|XP_002078157.1| GD23299 [Drosophila simulans]
gi|194190166|gb|EDX03742.1| GD23299 [Drosophila simulans]
Length = 492
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L + ++ +++F+ D EEL K+G I + N +H+ G+V+V++ E A RA +
Sbjct: 227 LTEQDLRHDYDEFFNDAVEELGKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTN 286
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
L GR+YA + + V+FS + +R A C C +G C ++HL
Sbjct: 287 LQGRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNGCGYLHL 331
>gi|18088983|gb|AAH21186.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Homo sapiens]
gi|123983214|gb|ABM83348.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
gi|123997921|gb|ABM86562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE RA+ LS R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHVVGNVYVKFRREEDGERAVAELSNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQY 107
+ V C +
Sbjct: 102 HGNVPEVASATSCICGPF 119
>gi|324505230|gb|ADY42252.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 151
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
DP + Q++F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F EE A +A+K
Sbjct: 88 DPEE-QKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFVREEDAEKAVKD 146
Query: 79 LSGRF 83
L R+
Sbjct: 147 LQNRW 151
>gi|294875296|ref|XP_002767259.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239868814|gb|EEQ99976.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 235
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 38/102 (37%)
Query: 25 QEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
QEHFE FYE++F EL YG FY
Sbjct: 76 QEHFEAFYEEVFLELANYG--------------------------------------TFY 97
Query: 85 AGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI 126
AGR I ++SPVTDF EA CRQ+++ C+RGG+CNF+H K +
Sbjct: 98 AGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 139
>gi|4914334|gb|AAD32882.1|AC005489_20 F14N23.20 [Arabidopsis thaliana]
Length = 836
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 38/136 (27%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-----------------------------------D 52
+E+FYED+ E KYGE+ + +C
Sbjct: 348 YEEFYEDVHTEFLKYGELVNFKVCRFSSAPSPPFPSFPLPPLFFLLSIISHRFILYQIRI 407
Query: 53 NLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN-- 110
N + H+ GNVYV +R E A A +S++GR++AG+ + +F ++ ++ A C +Y ++
Sbjct: 408 NGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAICGEYMKSRL 467
Query: 111 -TCNRGGYCNFMHLKR 125
TC+RG CNF+H R
Sbjct: 468 KTCSRGSACNFIHCFR 483
>gi|359392870|gb|AEV45842.1| rough endosperm 3 epsilon isoform [Zea mays]
Length = 368
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 55/85 (64%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+I++ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A S++GR
Sbjct: 279 EIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGR 338
Query: 83 FYAGRPIIVDFSPVTDFREATCRQY 107
++AG+ I +F VT ++ A C +
Sbjct: 339 YFAGKQITCEFVAVTRWKAAICDMF 363
>gi|393907857|gb|EFO28010.2| hypothetical protein LOAG_00486 [Loa loa]
Length = 251
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 25 QEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
Q +F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F EE A +A+K L R+
Sbjct: 192 QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKAVKDLENRW 251
>gi|114676797|ref|XP_512599.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 4 [Pan
troglodytes]
gi|410220668|gb|JAA07553.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410247510|gb|JAA11722.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410287276|gb|JAA22238.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410329231|gb|JAA33562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
Length = 202
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE RA+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQY 107
+ V C +
Sbjct: 102 HGNVPEVASATSCICGPF 119
>gi|397490403|ref|XP_003816194.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Pan
paniscus]
Length = 202
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE RA+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQY 107
+ V C +
Sbjct: 102 HGNVPEVASATSCICGPF 119
>gi|67476636|ref|XP_653880.1| U2 snRNP auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56470879|gb|EAL48494.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407039409|gb|EKE39628.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
gi|449708002|gb|EMD47542.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 251
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 5 LDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYV 64
+ ++ P V + P+ QE +E F+ DL+ + +G++ + + +N A H+ GNV V
Sbjct: 33 VTILLPHVWPAQQVITPQD-QEQYEHFFFDLYTLCSGFGKVVDMIVSENQASHLKGNVLV 91
Query: 65 QFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLK 124
+F E A A+K L G+ + + + + D +E+ C+Q++ C + CN++H+
Sbjct: 92 KFATEAMAEEAIKHLQGQLFGSVVLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVL 151
Query: 125 RI 126
I
Sbjct: 152 PI 153
>gi|444322338|ref|XP_004181817.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
gi|387514862|emb|CCH62298.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
Length = 213
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
F+ Y+D+F E K+G+I SL I N D + GNVY+++ + A A+ + + R+Y R
Sbjct: 104 FDSIYQDIFLEAMKFGKILSLEISVNENDCLNGNVYIKYLNDSIARDAMNNFNTRWYDER 163
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
PI D + ++ E TCR+Y+ C RG C +H + S L+ L
Sbjct: 164 PIYCD---LVNYNEGTCRRYDNGNCARGPECTLLHRRWPSSRLKWDL 207
>gi|256070881|ref|XP_002571770.1| arylformamidase [Schistosoma mansoni]
gi|353228669|emb|CCD74840.1| putative kynurenine aminotransferase [Schistosoma mansoni]
Length = 967
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 16/154 (10%)
Query: 16 GNPLDPRKIQEHFEDFYEDLFEEL-NKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
G +D ++ + +FY D+ EL +++G+I + C NLADH+ G+VYV+F AA
Sbjct: 254 GLEVDESQLLSDYHEFYHDVRMELESRWGKISVIRTCRNLADHLRGSVYVEFSRGPSAAW 313
Query: 75 -ALKSLSGRFYAGRPIIVDFSPV-TDFREATCRQYEENTCNRGG-YCNFMHL----KRIS 127
A ++ +GR++AGR + + +REA C Y C +G +CNF+H+ S
Sbjct: 314 DAAEACNGRWFAGRKLTCTVVRLGGGWREAICGLYHRGKCPKGDLHCNFLHVFLNPGETS 373
Query: 128 RDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDR 161
DL++ L+ R R SP + H DR
Sbjct: 374 NDLQKTLW--------RHVGRLISPVDNNGHGDR 399
>gi|426388320|ref|XP_004060589.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 202
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 31 FYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A+ L+ R++ G+ +
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGQWAVAELNNRWFNGQAV 101
Query: 90 IVDFSPVTDFREATCRQY 107
+ V C +
Sbjct: 102 HGNVPEVASATSCICSPF 119
>gi|168061106|ref|XP_001782532.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666017|gb|EDQ52684.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 23 KIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGR 82
++ + +E+FY+D+ E ++GE+ + +C N + H+ GNVYV + +E A A ++GR
Sbjct: 59 EVAQEYEEFYDDVHSEFIQFGELVNFKVCRNGSPHLRGNVYVHYASQESAMLAYNHMNGR 118
Query: 83 FYAGRPIIVDFSP----VTDFREATCRQYEENTCNRGGYCNFMH 122
FYA + +++ P + D A C TC+ G CNFMH
Sbjct: 119 FYAKKQVVL---PRGWKICDIL-ACCFWSTVQTCSHGSACNFMH 158
>gi|195471335|ref|XP_002087960.1| GE18306 [Drosophila yakuba]
gi|194174061|gb|EDW87672.1| GE18306 [Drosophila yakuba]
Length = 496
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L + ++ +++F+ D EEL K+G I + N +H+ G+V+V++ E A RA +
Sbjct: 227 LTEQDLRHDYDEFFRDAVEELEKFGTIVNFRTVRNTLEHLRGHVFVEYTSERSALRAFTN 286
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
L GR+YA + + V+FS + +R A C G C ++HL
Sbjct: 287 LQGRYYASKRLNVEFSNLRTWRGAVC----------GNGCGYLHL 321
>gi|194856250|ref|XP_001968707.1| GG25018 [Drosophila erecta]
gi|190660574|gb|EDV57766.1| GG25018 [Drosophila erecta]
Length = 447
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L + ++ +++F+ D EEL K+G I + N +H+ G+V+V++ E A RA +
Sbjct: 227 LTEQDLRHDYDEFFNDAVEELRKFGTIVNFRTVRNTVEHLRGHVFVEYTNERSALRAFTN 286
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
L GR+YA + + V+FS + +R A C G C ++HL
Sbjct: 287 LQGRYYASKKLNVEFSNLKTWRGAVC----------GNGCGYLHL 321
>gi|195386482|ref|XP_002051933.1| GJ24411 [Drosophila virilis]
gi|194148390|gb|EDW64088.1| GJ24411 [Drosophila virilis]
Length = 449
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
+++F++D EL K+G+I + N H+ G+V+V++ E A RA +L GR+YA R
Sbjct: 236 YDEFFKDATGELEKFGKIVNFRTVCNTLPHLRGHVFVEYAHERFALRAFINLQGRYYAAR 295
Query: 88 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 147
+ V+FS + +R A C C +G C ++HL R +L Y S +RS
Sbjct: 296 RLNVEFSNLKAWRGAVCGLSLTRKCPKGYSCGYLHLFRNPNNLFNSSLEPYGTPGS-ARS 354
Query: 148 RSRSP 152
SR+P
Sbjct: 355 VSRTP 359
>gi|302757309|ref|XP_002962078.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
gi|300170737|gb|EFJ37338.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
Length = 132
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 15 QGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAAR 74
+G +I++ FE+FYED+ E K+GE+ + +C N + H+ GNVYV ++ E A
Sbjct: 52 EGLECTDEEIEQKFEEFYEDVHSEFLKFGELVNFKVCRNSSPHLRGNVYVHYQSEADAVA 111
Query: 75 ALKSLSGRFYAGRPIIVDFS 94
A +LSGRFYA + ++ +S
Sbjct: 112 ACLALSGRFYASKQVLARYS 131
>gi|302785351|ref|XP_002974447.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
gi|300158045|gb|EFJ24669.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
Length = 56
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 40/56 (71%)
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 134
L+GRFY+GR I + SPVTDFREA+CRQ E+ C+RG CNF+ L SR L R L
Sbjct: 1 LNGRFYSGRSIAAELSPVTDFREASCRQEEQGGCSRGRCCNFLDLYHPSRALMRAL 56
>gi|195342524|ref|XP_002037850.1| GM18489 [Drosophila sechellia]
gi|194132700|gb|EDW54268.1| GM18489 [Drosophila sechellia]
Length = 447
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L + ++ +++F+ D EEL K+G I + N +H+ G+V+V++ E A RA +
Sbjct: 227 LTEQDLRHDYDEFFNDAVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTN 286
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
L GR+YA + + V+FS + +R A C G C ++HL
Sbjct: 287 LQGRYYASKRLNVEFSNLRTWRGAVC----------GNGCGYLHL 321
>gi|242007963|ref|XP_002424784.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
gi|212508307|gb|EEB12046.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
Length = 408
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
HF++FY D+ E K+G++ + +C N H+ GNVY++++ ++ A A K GR+Y
Sbjct: 233 HFKEFYTDIVPEFKKFGDLTMVKVCCNSEPHLRGNVYIEYKHKKDALLAYKEFQGRWYG- 291
Query: 87 RPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
D+ A C + C +G CNF+H+ R
Sbjct: 292 -----------DWGGAVCGDFARRRCLKGKSCNFLHVFR 319
>gi|340508294|gb|EGR34030.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 126
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 14 AQGNPLDPRKIQ---EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE 70
AQGN + +I+ + FE+FYE++F EL YGEI+ L ICDN+ DHM GNVYV++ +E
Sbjct: 62 AQGNRVSEEEIKKALDTFEEFYEEVFLELANYGEIDDLIICDNIGDHMRGNVYVKYIKES 121
Query: 71 QAARA 75
AA
Sbjct: 122 SAANV 126
>gi|195433120|ref|XP_002064563.1| GK23757 [Drosophila willistoni]
gi|194160648|gb|EDW75549.1| GK23757 [Drosophila willistoni]
Length = 589
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
+++ +++F+ D EL K+G+I + N D++ G+V+V++ +E A RA +L GR+
Sbjct: 228 LRDSYDEFFHDAVAELEKFGKIVNFRALRNTLDYLRGHVFVEYAQERHALRAFINLQGRY 287
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
YA R + V+FS + +R A C G C ++HL R
Sbjct: 288 YASRQLNVEFSNLKGWRGAVC----------GYSCAYLHLFR 319
>gi|119629908|gb|EAX09503.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_c
[Homo sapiens]
Length = 128
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
Query: 24 IQEHFEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQF 66
+QEH+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKV 44
>gi|194766159|ref|XP_001965192.1| GF21431 [Drosophila ananassae]
gi|190617802|gb|EDV33326.1| GF21431 [Drosophila ananassae]
Length = 314
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
F++F+ED +EL K+G I + N +H+ G+V+V++ E A RA +L GR+YA R
Sbjct: 236 FDEFFEDAIKELEKFGSIVNFRAVRNTLEHLRGHVFVEYGHERSALRAFINLQGRYYASR 295
Query: 88 PIIVDFSPVTDFREATC 104
+ V+FS + +R A C
Sbjct: 296 RLNVEFSNLKTWRGAVC 312
>gi|325187017|emb|CCA21561.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 341
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
E YE + EL++ + + + NLA H+ GNVY++F EE A +A ++L R+Y GR
Sbjct: 209 ELLYE-MSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRI 267
Query: 89 IIVDFSPVTDFREATCRQYEENTCNRGGY-CNFMHL 123
+ + P+ ++ + C + + C +G CN++HL
Sbjct: 268 LDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 303
>gi|325187016|emb|CCA21560.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 344
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
E YE + EL++ + + + NLA H+ GNVY++F EE A +A ++L R+Y GR
Sbjct: 212 ELLYE-MSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRI 270
Query: 89 IIVDFSPVTDFREATCRQYEENTCNRGGY-CNFMHL 123
+ + P+ ++ + C + + C +G CN++HL
Sbjct: 271 LDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 306
>gi|325187018|emb|CCA21562.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 314
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
E YE + EL++ + + + NLA H+ GNVY++F EE A +A ++L R+Y GR
Sbjct: 182 ELLYE-MSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRI 240
Query: 89 IIVDFSPVTDFREATCRQYEENTCNRGGY-CNFMHL 123
+ + P+ ++ + C + + C +G CN++HL
Sbjct: 241 LDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 276
>gi|195035213|ref|XP_001989072.1| GH11518 [Drosophila grimshawi]
gi|193905072|gb|EDW03939.1| GH11518 [Drosophila grimshawi]
Length = 312
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 53/84 (63%)
Query: 21 PRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLS 80
P+ ++ ++ F+ D+ +EL K+G+I + + N H+ G+V+V++ +E A RA +L
Sbjct: 227 PQDLRADYDAFFNDVVDELQKFGKIINFRVVCNTLPHLRGHVFVEYAQERYALRAFVNLQ 286
Query: 81 GRFYAGRPIIVDFSPVTDFREATC 104
GR+YA R + V+FS + +R A C
Sbjct: 287 GRYYASRRLNVEFSNLKAWRGAVC 310
>gi|325187020|emb|CCA21564.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 304
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
LD + + ++ EL++ + + + NLA H+ GNVY++F EE A +A ++
Sbjct: 161 LDEILVDGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQA 220
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG-YCNFMHL 123
L R+Y GR + + P+ ++ + C + + C +G CN++HL
Sbjct: 221 LRVRYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 266
>gi|325187019|emb|CCA21563.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 301
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
E YE + EL++ + + + NLA H+ GNVY++F EE A +A ++L R+Y GR
Sbjct: 169 ELLYE-MSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRI 227
Query: 89 IIVDFSPVTDFREATCRQYEENTCNRGGY-CNFMHL 123
+ + P+ ++ + C + + C +G CN++HL
Sbjct: 228 LDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 263
>gi|28574034|ref|NP_787976.1| CG3294, isoform B [Drosophila melanogaster]
gi|28380246|gb|AAO41150.1| CG3294, isoform B [Drosophila melanogaster]
Length = 314
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 52/86 (60%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L + ++ +++F+ D+ EEL K+G I + N +H+ G+V+V++ E A RA +
Sbjct: 227 LTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTN 286
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATC 104
L GR+YA + + V+FS + +R A C
Sbjct: 287 LQGRYYASKRLNVEFSNLRTWRGAVC 312
>gi|21483354|gb|AAM52652.1| GM14666p [Drosophila melanogaster]
Length = 321
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 52/86 (60%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L + ++ +++F+ D+ EEL K+G I + N +H+ G+V+V++ E A RA +
Sbjct: 234 LTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTN 293
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATC 104
L GR+YA + + V+FS + +R A C
Sbjct: 294 LQGRYYASKRLNVEFSNLRTWRGAVC 319
>gi|241561670|ref|XP_002401206.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
gi|215499816|gb|EEC09310.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
Length = 409
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 69 EEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISR 128
EE+A RAL +GR+YAGR I +FSPV ++ A C + N C +G CNF+H+ R
Sbjct: 156 EEEATRALVMFNGRWYAGRQISCEFSPVQRWKSAICGLFFRNRCPKGRGCNFLHVFRNPT 215
Query: 129 D 129
D
Sbjct: 216 D 216
>gi|195114372|ref|XP_002001741.1| GI17015 [Drosophila mojavensis]
gi|193912316|gb|EDW11183.1| GI17015 [Drosophila mojavensis]
Length = 170
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
L + ++ +++F+ D EL K+G+I + N H+ G+V+V++ +E A RA +
Sbjct: 83 LTEQDLRNDYDEFFNDAIGELQKFGKILNFRAVRNTLPHLRGHVFVEYAQERFALRAFVN 142
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATC 104
L GR+YA R + V+FS + +R A C
Sbjct: 143 LQGRYYASRRLQVEFSNLKGWRGAVC 168
>gi|345569109|gb|EGX51978.1| hypothetical protein AOL_s00043g712 [Arthrobotrys oligospora ATCC
24927]
Length = 569
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNIC----DNLAD 56
+ Q L+M+T D QE +E+ ED+ +E NK+G I + I + A
Sbjct: 471 VLQLLNMVT---------ADELLDQEEYEEILEDVTDECNKFGPIIDIKIPRPSGNQRAA 521
Query: 57 HMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
VG +YV+F E E A +ALKSL+GR +A R +IV +
Sbjct: 522 AGVGKIYVRFEEHESAEKALKSLAGRKFADRTVIVSY 558
>gi|302775180|ref|XP_002971007.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
gi|300160989|gb|EFJ27605.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
Length = 132
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 34 DLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
D+ E K+GE+ + +C N + H+ GNVYV ++ EE A A +LSGRFYA + ++ +
Sbjct: 71 DVHSEFLKFGELVNFKVCRNSSPHLRGNVYVHYQSEEDAVAACLALSGRFYASKQVLARY 130
Query: 94 S 94
S
Sbjct: 131 S 131
>gi|161612122|gb|AAI56009.1| LOC100135135 protein [Xenopus (Silurana) tropicalis]
Length = 260
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 74 RALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 123
+A +GR+YA R + +FSPVT ++ A C +E C RG +CNF+H+
Sbjct: 2 KAFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV 51
>gi|320170643|gb|EFW47542.1| splicing factor u2af large subunit [Capsaspora owczarzaki ATCC
30864]
Length = 393
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 12/96 (12%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLAD---H 57
+ Q L+M+TP +DP E ++D +D+ EE +KYGE+ S+ I +
Sbjct: 296 VVQLLNMVTPE-----ELMDP----EEYQDIVDDIREECSKYGEVVSVAIPRPVPGREVS 346
Query: 58 MVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
VG VYV+F + A +AL++LSGR +A R ++ F
Sbjct: 347 GVGKVYVEFSNVDHAYQALQALSGRKFASRIVVTSF 382
>gi|194884971|ref|XP_001976363.1| GG20057 [Drosophila erecta]
gi|190659550|gb|EDV56763.1| GG20057 [Drosophila erecta]
Length = 440
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 17/102 (16%)
Query: 9 TPGVDAQGNPLDPRKI--------------QEHFEDFYEDLFEELNKYGEIESLNICDNL 54
PG+ +P P +I E FED D+ +E KYGE+ S+ I +
Sbjct: 327 VPGISTLLDPGSPTEIICLLNMVLPEELLDNEEFEDIRTDIEQECAKYGEVRSIKIPRPI 386
Query: 55 ADHM---VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
G V+VQF E + RALK+LSGR ++GR ++ F
Sbjct: 387 GQAPKRGCGKVFVQFESVEDSQRALKALSGRKFSGRIVMTSF 428
>gi|308161619|gb|EFO64057.1| Splicing factor U2AF subunit, putative [Giardia lamblia P15]
Length = 191
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSL 79
D ++ ++ +ED+F L + G ++ + +N +H+ G VY Q+ + A L
Sbjct: 54 DKAELYRFYDHCFEDIFLRLAQLGPMQDFLVAEN-TNHLAGTVYAQYTSQVAAQDVASKL 112
Query: 80 SGRFYAGRPIIVDFSPVTDFREATCR-QYEE----NTCNRGGYCNFMH 122
S +YAG P+ + V + CR +Y N C G C+F+H
Sbjct: 113 SNTYYAGFPVKAEVIGVESIHKTLCRDEYASGKSGNKCAHGLSCSFVH 160
>gi|449547880|gb|EMD38847.1| hypothetical protein CERSUDRAFT_81656 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 24/101 (23%)
Query: 17 NPLDPRKIQ--EHFEDFYEDLFEELNKYGEIESLNI--------------------CDNL 54
N + P ++Q + + D YED+ EE +YG +E L I L
Sbjct: 348 NMVVPEELQDDQEYADIYEDITEECGRYGAVEDLRIPRPVKRDKAKWGENGMDSARAAQL 407
Query: 55 ADHM--VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
AD VG VYV++ + AA ALK+L+GR +AGR II
Sbjct: 408 ADEAAGVGRVYVKYAQPNSAANALKALAGRSFAGRSIIATL 448
>gi|358334074|dbj|GAA52523.1| kynurenine---oxoglutarate transaminase [Clonorchis sinensis]
Length = 1330
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 28 FEDFYEDLFEELN-KYGEIESLNICDNLADHMVGNVYVQFREEEQAA-RALKSLSGRFYA 85
+ +FY D+ +EL ++G + +L C N +H+ G VYV+F A A ++ +GR++A
Sbjct: 539 YVEFYHDVRDELEARWGRVAALRTCRNRTEHLRGTVYVEFALGSGATWDAAEACAGRWFA 598
Query: 86 GRPIIVDFSPV-TDFREATCRQYEENTCNRG-GYCNFMHL 123
GR + + +REA C + C +G CNF+H+
Sbjct: 599 GRQLTCMVVRLGGGWREAICGLHHRRRCPKGDSKCNFLHV 638
>gi|347842431|emb|CCD57003.1| hypothetical protein [Botryotinia fuckeliana]
Length = 606
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 1 MYQRLDMITP--GVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLA--- 55
+ Q L+M+TP +D E +E+ ED+ EE KYG++ + +
Sbjct: 508 VLQLLNMVTPEELID-----------NEDYEEICEDVKEECEKYGKVLEMKVPRPTGGSR 556
Query: 56 -DHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATC 104
VG ++V+F + A +ALK+L+GR +A R ++ + P +F C
Sbjct: 557 QSTGVGKIFVKFDTPDSAGKALKALAGRKFADRTVVTTYFPEENFEVGAC 606
>gi|195489053|ref|XP_002092574.1| GE11595 [Drosophila yakuba]
gi|194178675|gb|EDW92286.1| GE11595 [Drosophila yakuba]
Length = 437
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 9 TPGVDAQGNPLDPRKI--------------QEHFEDFYEDLFEELNKYGEIESLNI---C 51
PG+ +P P +I E FED D+ +E KYG++ S+ I
Sbjct: 324 VPGISTLLDPGSPTEILCLLNMVLPEELLDNEEFEDIRSDIKQECAKYGDVRSIKIPRPV 383
Query: 52 DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
G V+VQF E + +ALK+LSGR ++GR ++ F
Sbjct: 384 GQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSF 425
>gi|253746096|gb|EET01601.1| Splicing factor U2AF subunit, putative [Giardia intestinalis ATCC
50581]
Length = 191
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSL 79
D ++ + ++ +ED+F L + G ++ + +N +H+ G VY Q+ + A A L
Sbjct: 54 DRAELYKFYDHCFEDIFLRLVQLGPLQDFLVAEN-TNHLAGTVYAQYASQVAAQDAASKL 112
Query: 80 SGRFYAGRPIIVDFSPVTDFREATCR-QYEE----NTCNRGGYCNFMH 122
S +YAG P+ + V + + CR +Y + C G C+F+H
Sbjct: 113 SDTYYAGFPVKAEVIGVENVHKMLCRDEYASGKPGSKCAHGLSCSFVH 160
>gi|170088030|ref|XP_001875238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650438|gb|EDR14679.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM-- 58
+ L+M+TP D + + D YED+ EE + YG +E L I A +
Sbjct: 254 ILLMLNMVTP---------DDLTDDQEYGDLYEDVKEECSNYGAVEDLRIPRPDAVRLDE 304
Query: 59 ---VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
VG VYV++++ E A AL +L+GR +AGR II
Sbjct: 305 ASGVGRVYVKYKDSESATAALNNLAGRSFAGRSIIATL 342
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNIC----DNLAD 56
+ Q L+M+TP + + +E+ ED+ EE K+G + SL I N
Sbjct: 486 VLQLLNMVTP---------EELMDNDDYEEIREDVLEECKKFGNVLSLKIPRPIGGNRQS 536
Query: 57 HMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATC 104
VG +YV+F + E A +AL++L+GR ++ R ++ + P ++ E C
Sbjct: 537 AGVGKIYVKFEQVESATKALRALAGRKFSDRTVVTTYFPEENY-EVNC 583
>gi|297745616|emb|CBI40781.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 31 FYEDLFEELNKYGEIESLNICDNLADHMVGNVYV 64
+++++L K+GEIESLN+CDNLADHM+G V +
Sbjct: 57 LLSNMYQQLGKFGEIESLNVCDNLADHMIGAVLL 90
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 12/92 (13%)
Query: 5 LDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLA---DHMVGN 61
L+M+TP +DP++ +E+ ED+ EE +KYG++E L I + VG
Sbjct: 254 LNMVTPE-----ELMDPQE----YEEIQEDVHEECSKYGKVEELKIPRPQPPKENKGVGK 304
Query: 62 VYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
++V++ E A +AL++L+GR +A R ++V F
Sbjct: 305 IFVKYDTPESAQKALRALAGRKFADRTVVVTF 336
>gi|159112951|ref|XP_001706703.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
gi|157434802|gb|EDO79029.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
Length = 193
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSL 79
D ++ + ++ +ED+F L + G ++ + +N +H+ G VY Q+ + A L
Sbjct: 56 DKAELYKFYDHCFEDIFLRLAQLGPMQDFLVAEN-TNHLAGTVYAQYASQVAAQDVASKL 114
Query: 80 SGRFYAGRPIIVDFSPVTDFREATCR-QYEE----NTCNRGGYCNFMH 122
S +YAG P+ + V + CR +Y + C G C+F+H
Sbjct: 115 SNTYYAGFPVKAEVIGVESIHKTLCRDEYASGKSGSKCAHGLSCSFVH 162
>gi|367020820|ref|XP_003659695.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
gi|347006962|gb|AEO54450.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
Length = 567
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLA----D 56
+ Q L+M+TP + + +E+ ED+ EE K+G+I SL I +
Sbjct: 469 VLQLLNMVTP---------EELMDNDDYEEIREDVQEECQKFGKILSLKIPRPVGGSRQS 519
Query: 57 HMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 99
VG +Y+++ E A +AL++L+GR +A R ++ + P +F
Sbjct: 520 AGVGKIYIKYETAESATKALRALAGRKFADRTVVTTYFPEENF 562
>gi|336274240|ref|XP_003351874.1| hypothetical protein SMAC_00421 [Sordaria macrospora k-hell]
gi|380096157|emb|CCC06204.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 594
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLA----D 56
+ Q L+M+T D + +E+ +D+ EE K+G I SL I
Sbjct: 496 VVQLLNMVT---------ADELMDNDDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQS 546
Query: 57 HMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 99
VG +Y+++ +QA +ALKSL+GR +A R ++ + P +F
Sbjct: 547 AGVGKIYIKYENSDQATKALKSLAGRKFADRTVVATYFPEENF 589
>gi|336368252|gb|EGN96595.1| hypothetical protein SERLA73DRAFT_93106 [Serpula lacrymans var.
lacrymans S7.3]
Length = 396
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNIC-DNLADHM- 58
+ L+M+TP D + + D YED+ EE + YG +E L I + D +
Sbjct: 277 ILLMLNMVTP---------DDLTDDQEYGDLYEDVKEECSVYGAVEDLRIPRPSAMDAIR 327
Query: 59 ------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
VG VYV++ + + A ALK+L+GR +AGR II
Sbjct: 328 QDEAAGVGRVYVKYIDADSANNALKALAGRSFAGRSIIATL 368
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
F D +D+ +E K+G +E + I + D GNV+++F +QA A +L+GR++AG+
Sbjct: 560 FLDLGDDVRDECKKFGSVEKVWIDERNVD---GNVWIRFAHPDQARAAFGALNGRYFAGK 616
Query: 88 PIIVDFSPVTD-FREATC 104
PI +F ++D +TC
Sbjct: 617 PISAEF--ISDAVWSSTC 632
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 28 FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGR 87
F D +D+ +E K+G +E + I + D GNV+++F +QA A +L+GR++AG+
Sbjct: 560 FLDLGDDVRDECKKFGSVEKVWIDERNVD---GNVWIRFAHPDQARAAFGALNGRYFAGK 616
Query: 88 PIIVDFSPVTD-FREATC 104
PI +F ++D +TC
Sbjct: 617 PISAEF--ISDAVWSSTC 632
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
+D ++ F D +D+ +E K+G +E + I + D GNV+++F +QA A +
Sbjct: 560 VDLKEDPHFFLDLGDDVRDECKKFGSVEKVWIDERNVD---GNVWIRFAHPDQARAAFGA 616
Query: 79 LSGRFYAGRPIIVDFSPVTD-FREATC 104
L+GR++AG+PI +F ++D +TC
Sbjct: 617 LNGRYFAGKPISAEF--ISDAVWSSTC 641
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 30 DFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPI 89
D ED+ EE +KYG++ C + D G VY++F E AA+A+++L+GR++AG+ I
Sbjct: 522 DIQEDVTEECSKYGKVLQ---CHVVRDSPSGLVYLRFESSEGAAKAIQALNGRWFAGKVI 578
Query: 90 IVDF 93
+F
Sbjct: 579 SAEF 582
>gi|395331854|gb|EJF64234.1| hypothetical protein DICSQDRAFT_144911 [Dichomitus squalens
LYAD-421 SS1]
Length = 587
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 24/101 (23%)
Query: 17 NPLDPRKIQ--EHFEDFYEDLFEELNKYGEIESLNICDNL-------------------- 54
N + P ++Q + + D ED+ EE KYGE+E L I +
Sbjct: 459 NMVVPEELQDDQEYADILEDVKEECGKYGEVEDLRIPRPVKKDKAKWGEGGRDSALAQQR 518
Query: 55 ADHM--VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
AD VG VYV++ AA ALK+L+GR +AGR II
Sbjct: 519 ADEAAGVGRVYVKYASPRSAANALKALAGRSFAGRSIIATL 559
>gi|448118323|ref|XP_004203467.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|448120732|ref|XP_004204050.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|359384335|emb|CCE79039.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|359384918|emb|CCE78453.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
Length = 581
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 17 NPLDPRKIQE--HFEDFYEDLFEELNKYGEIESLNI-----------CDNLADHMVGNVY 63
N + PR+I++ FE D+ E++KYG ++S+ + +L + VG ++
Sbjct: 481 NAVSPREIRDKAEFEFIINDIVNEVSKYGRVKSVKVPQPSSEYYQISLSDLPEPHVGRIF 540
Query: 64 VQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
++ +E+ A A+ L+GR Y R ++ F D++
Sbjct: 541 IELEDEDSALNAIMKLAGRLYNDRVVVCAFFDYNDYK 577
>gi|242069889|ref|XP_002450221.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
gi|241936064|gb|EES09209.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
Length = 469
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARAL 76
P + R +E + D+ EE K+G ++++ +C+N H G V V+F++ + AA+ +
Sbjct: 365 TPAELRADEELLSELETDVREECIKFGPVDNVKVCEN---HPQGVVLVKFKDRKDAAKCI 421
Query: 77 KSLSGRFYAGRPI 89
+ ++GR++AGR I
Sbjct: 422 EKMNGRWFAGRQI 434
>gi|430813569|emb|CCJ29085.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 545
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 17 NPLDPRKIQE--HFEDFYEDLFEELNKYGEIESLNICDNL----ADHMVGNVYVQFREEE 70
N + P ++Q+ +E+ ED+ +E +KYG++ L I + ++ VG VYV+F E
Sbjct: 453 NMVTPEELQDDDEYEEISEDIRDECSKYGKVLDLKIPRGIGGSRSNFGVGKVYVRFETEM 512
Query: 71 QAARALKSLSGRFYAGRPIIVDFSP 95
+A+K L+GR ++ R ++ F P
Sbjct: 513 SCLKAMKDLAGRKFSDRTVLTSFYP 537
>gi|270011684|gb|EFA08132.1| hypothetical protein TcasGA2_TC005736 [Tribolium castaneum]
Length = 432
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 5 LDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNI---CDNLADHMVGN 61
L+M+TP D K +E +ED ED+ EE NKYG + S+ I D + G
Sbjct: 339 LNMVTP---------DELKDEEEYEDILEDIKEECNKYGVVRSIEIPRPIDGVEVPGCGK 389
Query: 62 VYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
V+V+F +A ++L+GR ++ R ++ +
Sbjct: 390 VFVEFNSVLDCQKAQQTLTGRKFSNRVVVTSY 421
>gi|91088649|ref|XP_974465.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor 2 [Tribolium castaneum]
Length = 450
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 5 LDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNI---CDNLADHMVGN 61
L+M+TP D K +E +ED ED+ EE NKYG + S+ I D + G
Sbjct: 357 LNMVTP---------DELKDEEEYEDILEDIKEECNKYGVVRSIEIPRPIDGVEVPGCGK 407
Query: 62 VYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
V+V+F +A ++L+GR ++ R ++ +
Sbjct: 408 VFVEFNSVLDCQKAQQTLTGRKFSNRVVVTSY 439
>gi|340371085|ref|XP_003384076.1| PREDICTED: hypothetical protein LOC100639094 [Amphimedon
queenslandica]
Length = 692
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 2 YQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGN 61
+QR+ + D + +DP I D +DL EE +K+GE++ + + D H+ G
Sbjct: 251 HQRIVIFKHLFDPKEFEVDPTLIT----DIRDDLREECSKFGEVKKVLVFDR---HVDGV 303
Query: 62 VYVQFREEEQAARALKSLSGRFYAGRPI-IVDFSPVTDF--------REATCRQYEENTC 112
V F+E E A A+ +++GR+YAGR + + + VT++ RE +Q+EE
Sbjct: 304 ASVAFKEFEPAEAAITAMNGRYYAGRQLEVFLWDGVTNYQIEETDKERELRLKQWEEYLQ 363
Query: 113 NRGGYCNFMHLKRISRDL 130
+ +++ +S +
Sbjct: 364 SGASKSFLLYIPSLSLTI 381
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 17 NPLDPRKI--QEHFEDFYEDLFEELNKYGEIESLNI-----CDNLADHMVGNVYVQFREE 69
N ++P ++ E +ED ED+ EE +KYGE+ + I D +G V+V F+
Sbjct: 428 NMVEPEELVDDEEYEDIIEDVREESSKYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTV 487
Query: 70 EQAARALKSLSGRFYAGRPIIVDF 93
A +A +L+GR + G+ +I ++
Sbjct: 488 SDAEKAFAALTGRRFGGKSVIANY 511
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNIC---DNLADHMVGNVYVQFREEEQAARALKSLSGR 82
E + D ED+ EE ++G + + I D +G +YV+F +EE A ALK+L+GR
Sbjct: 515 EEYADLAEDVEEECKRFGGVTGMEIPRPKDGEEVPGLGCIYVRFGKEEDAVSALKALNGR 574
Query: 83 FYAGRPIIVDFSPVTDF 99
+ G + V + PV F
Sbjct: 575 KFGGNIVKVTYFPVDKF 591
>gi|193629757|ref|XP_001950852.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Acyrthosiphon
pisum]
Length = 446
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 5 LDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNI---CDNLADHMVGN 61
L+M+TP D K +E +ED ED+ EE NKYG + SL I + + G
Sbjct: 353 LNMVTP---------DELKDEEEYEDILEDIREECNKYGVVRSLEIPRPIEGIDVPGCGK 403
Query: 62 VYVQFREEEQAARALKSLSGRFYAGRPIIVDF 93
V+++F +A ++L+GR + R ++ F
Sbjct: 404 VFIEFNAIPDCQKAQQALAGRKFNNRVVVTSF 435
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 17 NPLDPRKI--QEHFEDFYEDLFEELNKYGEIESLNI-----CDNLADHMVGNVYVQFREE 69
N ++P ++ E +ED ED+ EE +KYGE+ + I D +G V+V F+
Sbjct: 444 NMVEPEELVDDEEYEDIIEDVREESSKYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTV 503
Query: 70 EQAARALKSLSGRFYAGRPIIVDF 93
A +A +L+GR + G+ +I ++
Sbjct: 504 SDAEKAFAALTGRRFGGKSVIANY 527
>gi|226532572|ref|NP_001144599.1| uncharacterized protein LOC100277614 [Zea mays]
gi|195644392|gb|ACG41664.1| hypothetical protein [Zea mays]
Length = 165
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 45/85 (52%), Gaps = 23/85 (27%)
Query: 157 SHEDRSHSGHGR-----RYDD------RDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYH 205
S DR G GR RYDD R + Y+ RR + P RRGRS
Sbjct: 93 SRHDRYDDGAGRGGRHDRYDDGAGRGGRYERYDDGGRRRHGSPP--RRGRS--------- 141
Query: 206 SPVREGSEERRAKIEQWNREREQQE 230
PVRE SEERRAKIEQWNRERE ++
Sbjct: 142 -PVRESSEERRAKIEQWNRERESKQ 165
>gi|402590758|gb|EJW84688.1| hypothetical protein WUBG_04401 [Wuchereria bancrofti]
Length = 477
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNI---CDNLADHMVGNVYVQFREEEQAARAL 76
D K E +ED ED+ EE KYG ++SL I + VG V+V+F +++ +A
Sbjct: 390 DELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVGKVFVEFNSKQECQKAQ 449
Query: 77 KSLSGRFYAGRPIIVDF 93
+L+GR +A R ++ +
Sbjct: 450 AALTGRKFANRTVVTSY 466
>gi|312085420|ref|XP_003144672.1| U2af splicing factor protein 1 [Loa loa]
Length = 143
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNI---CDNLADHMVGNVYVQFREEEQAARAL 76
D K E +ED ED+ EE KYG ++SL I + VG V+V+F +++ +A
Sbjct: 56 DELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVGKVFVEFNSKQECQKAQ 115
Query: 77 KSLSGRFYAGRPIIVDF 93
+L+GR +A R ++ +
Sbjct: 116 AALTGRKFANRTVVTSY 132
>gi|393215487|gb|EJD00978.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 247
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 87/196 (44%), Gaps = 37/196 (18%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL EE +++G +E + I D +D G +++ E AAR ++ L+G GR I VD
Sbjct: 49 DLDEEFSRFGRVEKVTIVYDQRSDRSRGFGFIKLASVEDAARCIQELNGVELNGRRIRVD 108
Query: 93 FSPVTD------------FREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRR 140
+S VT+ R T R Y+ +RG Y + I RD + R
Sbjct: 109 YS-VTERPHAPTPGEYMGHRRNTGRDYDRR--DRGPYRESYRERDIRRDYDERDRYYDRE 165
Query: 141 RHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPS-------HRR 193
R+ R Y S +DR +S GR DRD Y R RHRS +P HRR
Sbjct: 166 RYDR--------YDRYSDKDR-YSDRGR---DRDPYGRDRDWRHRSPAPVGRYGSDRHRR 213
Query: 194 GRSRSPGGRRYHSPVR 209
SRSP R SP R
Sbjct: 214 SYSRSPP--RGSSPAR 227
>gi|405978554|gb|EKC42934.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Crassostrea gigas]
Length = 729
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFR 67
D ++ ++F+DFY D+ E YG++ + +C+N H+ GNVYVQ++
Sbjct: 571 DDGELYQNFQDFYLDIVPEFRNYGKLSQVKVCNNYEPHLRGNVYVQYK 618
>gi|170575889|ref|XP_001893425.1| U2 auxiliary factor 65 kDa subunit [Brugia malayi]
gi|158600599|gb|EDP37742.1| U2 auxiliary factor 65 kDa subunit, putative [Brugia malayi]
Length = 502
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNI---CDNLADHMVGNVYVQFREEEQAARAL 76
D K E +ED ED+ EE KYG ++SL I + VG V+V+F +++ +A
Sbjct: 415 DELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVGKVFVEFNSKQECQKAQ 474
Query: 77 KSLSGRFYAGRPIIVDF 93
+L+GR +A R ++ +
Sbjct: 475 AALTGRKFANRTVVTSY 491
>gi|393909510|gb|EJD75480.1| hypothetical protein LOAG_17389 [Loa loa]
Length = 502
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNI---CDNLADHMVGNVYVQFREEEQAARAL 76
D K E +ED ED+ EE KYG ++SL I + VG V+V+F +++ +A
Sbjct: 415 DELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVGKVFVEFNSKQECQKAQ 474
Query: 77 KSLSGRFYAGRPIIVDF 93
+L+GR +A R ++ +
Sbjct: 475 AALTGRKFANRTVVTSY 491
>gi|413948478|gb|AFW81127.1| hypothetical protein ZEAMMB73_610548, partial [Zea mays]
Length = 108
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 25/29 (86%)
Query: 202 RRYHSPVREGSEERRAKIEQWNREREQQE 230
RR SPVRE SEERRAKIEQWNRERE ++
Sbjct: 80 RRGRSPVRESSEERRAKIEQWNRERESKQ 108
>gi|71996490|ref|NP_001022970.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
gi|351018337|emb|CCD62281.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
Length = 471
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM---VGNVYVQFREEEQAARAL 76
D K + +E+ ED+ +E +KYG + SL I DH VG V+V+F RA
Sbjct: 384 DELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQ 443
Query: 77 KSLSGRFYAGRPIIVDF 93
+L+GR +A R ++ +
Sbjct: 444 AALTGRKFANRTVVTSY 460
>gi|71996475|ref|NP_001022967.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
gi|6226906|sp|P90978.2|U2AF2_CAEEL RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
gi|3334906|gb|AAC26982.1| splicing factor U2AF65 [Caenorhabditis elegans]
gi|351018334|emb|CCD62278.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
Length = 496
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM---VGNVYVQFREEEQAARAL 76
D K + +E+ ED+ +E +KYG + SL I DH VG V+V+F RA
Sbjct: 409 DELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQ 468
Query: 77 KSLSGRFYAGRPIIVDF 93
+L+GR +A R ++ +
Sbjct: 469 AALTGRKFANRTVVTSY 485
>gi|71996485|ref|NP_001022969.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
gi|351018336|emb|CCD62280.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
Length = 474
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM---VGNVYVQFREEEQAARAL 76
D K + +E+ ED+ +E +KYG + SL I DH VG V+V+F RA
Sbjct: 387 DELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQ 446
Query: 77 KSLSGRFYAGRPIIVDF 93
+L+GR +A R ++ +
Sbjct: 447 AALTGRKFANRTVVTSY 463
>gi|1710361|gb|AAB38280.1| splicing factor U2AF65 [Caenorhabditis briggsae]
Length = 488
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHM---VGNVYVQFREEEQAARALKSLSGR 82
E +E+ ED+ EE +KYG + SL I DH VG V+V+F RA +L+GR
Sbjct: 406 EDYEEILEDVREECSKYGIVRSLEIPRPYDDHPVPGVGKVFVEFATTSDCQRAQAALTGR 465
Query: 83 FYAGRPIIVDF 93
+A R ++ +
Sbjct: 466 KFANRTVVTSY 476
>gi|59862144|gb|AAH90381.1| htatsf1-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 524
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E K+G+++ L I D H G V F+E E+ +++L+GR++ GR +IV+
Sbjct: 366 EDLRSECEKFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIVE 422
Query: 93 -FSPVTDFR 100
+ VTD++
Sbjct: 423 SWDGVTDYQ 431
>gi|268575804|ref|XP_002642882.1| C. briggsae CBR-UAF-1 protein [Caenorhabditis briggsae]
gi|60415989|sp|P90727.2|U2AF2_CAEBR RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
Length = 488
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHM---VGNVYVQFREEEQAARALKSLSGR 82
E +E+ ED+ EE +KYG + SL I DH VG V+V+F RA +L+GR
Sbjct: 406 EDYEEILEDVREECSKYGIVRSLEIPRPYDDHPVPGVGKVFVEFATTSDCQRAQAALTGR 465
Query: 83 FYAGRPIIVDF 93
+A R ++ +
Sbjct: 466 KFANRTVVTSY 476
>gi|225434618|ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
Length = 429
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL ++YGEI +N+ D G +V + ++ A+ +L+G GR I VD
Sbjct: 51 DLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVD 110
Query: 93 FSPVTDF--------------REA--TCRQYEENTCNRGGYCNFMH 122
V+++ REA CR ++ CNRG C F H
Sbjct: 111 H--VSNYKKKEEEDEETERQKREARGVCRAFQRGECNRGAGCKFSH 154
>gi|71996481|ref|NP_497326.2| Protein UAF-1, isoform b [Caenorhabditis elegans]
gi|351018335|emb|CCD62279.1| Protein UAF-1, isoform b [Caenorhabditis elegans]
Length = 143
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM---VGNVYVQFREEEQAARAL 76
D K + +E+ ED+ +E +KYG + SL I DH VG V+V+F RA
Sbjct: 56 DELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQ 115
Query: 77 KSLSGRFYAGRPIIVDFSPV 96
+L+GR +A R ++ + V
Sbjct: 116 AALTGRKFANRTVVTSYYDV 135
>gi|301606045|ref|XP_002932639.1| PREDICTED: HIV Tat-specific factor 1 homolog [Xenopus (Silurana)
tropicalis]
Length = 452
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E K+G+++ L I D H G V F+E E+ +++L+GR++ GR +IV+
Sbjct: 294 EDLRSECEKFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIVE 350
Query: 93 -FSPVTDFR 100
+ VTD++
Sbjct: 351 SWDGVTDYQ 359
>gi|169642352|gb|AAI60527.1| htatsf1 protein [Xenopus (Silurana) tropicalis]
Length = 389
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 17 NPLDPRKIQEH---FEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAA 73
N P+ +E + EDL E K+G+++ L I D H G V F+E E+
Sbjct: 212 NMFHPKDFEEDPLVLNEIREDLRSECEKFGQVKKLLIFDQ---HPDGVASVAFKEAEEGD 268
Query: 74 RALKSLSGRFYAGRPIIVD-FSPVTDFR 100
+++L+GR++ GR +IV+ + VTD++
Sbjct: 269 MCIQALNGRWFGGRQLIVESWDGVTDYQ 296
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
E F++ ED+ EE KYG + + + D G VYV+F+ + A A KSL GR++A
Sbjct: 567 EFFDEIEEDVKEECGKYGTVIQVFVNKRNPD---GKVYVKFKNNDDAQAANKSLQGRYFA 623
Query: 86 GRPIIVDF 93
G I V +
Sbjct: 624 GNTIQVSY 631
>gi|301088364|ref|XP_002996880.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110854|gb|EEY68906.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 96
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNIC---DNLADHMVGNVYVQFREEEQAARA 75
+D + E + D ED+ EE ++G + + I D +G +YV+F +EE A A
Sbjct: 7 IDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRPKDGEEVPGLGCIYVRFGKEEDAVSA 66
Query: 76 LKSLSGRFYAGRPIIVDFSPVTDF 99
LK+L+GR + G + V + PV F
Sbjct: 67 LKALNGRKFGGNIVKVTYFPVDKF 90
>gi|348684506|gb|EGZ24321.1| hypothetical protein PHYSODRAFT_311360 [Phytophthora sojae]
Length = 529
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 31 FYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPII 90
ED+ +E +K GE+ + + A H+ G V ++F AAR ++ ++GRF+AGR +
Sbjct: 360 LQEDIHDECSKIGEVSKITL---FAKHVDGVVVIKFASSGSAARCVEVMNGRFFAGRKLE 416
Query: 91 VDFSPVTDF 99
F TD+
Sbjct: 417 CGFWDGTDY 425
>gi|189308116|gb|ACD86942.1| UAF-1 [Caenorhabditis brenneri]
Length = 108
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM---VGNVYVQFREEEQAARAL 76
D K E +E+ ED+ EE +KYG + SL I +H VG V+V+F RA
Sbjct: 21 DELKSDEDYEEILEDVREECSKYGIVRSLEIPRPYDEHPVPGVGKVFVEFASTSDCQRAQ 80
Query: 77 KSLSGRFYAGRPIIVDFSPV 96
+L+GR +A R ++ + V
Sbjct: 81 AALTGRKFANRTVVTSYYDV 100
>gi|341891946|gb|EGT47881.1| hypothetical protein CAEBREN_25972 [Caenorhabditis brenneri]
Length = 491
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 20 DPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHM---VGNVYVQFREEEQAARAL 76
D K E +E+ ED+ EE +KYG + SL I +H VG V+V+F RA
Sbjct: 404 DELKSDEDYEEILEDVREECSKYGIVRSLEIPRPYDEHPVPGVGKVFVEFASTSDCQRAQ 463
Query: 77 KSLSGRFYAGRPIIVDF 93
+L+GR +A R ++ +
Sbjct: 464 AALTGRKFANRTVVTSY 480
>gi|328860245|gb|EGG09351.1| hypothetical protein MELLADRAFT_42536 [Melampsora larici-populina
98AG31]
Length = 304
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL E ++YG++E + I D +D G +V R+ + A+ + L+G GRPI VD
Sbjct: 76 DLEAEFSRYGKVEKVVIVYDQRSDRSRGFGFVTMRDVQDASTCISELNGLDLHGRPIRVD 135
Query: 93 FSPVTDFREATCRQY 107
+S T + T QY
Sbjct: 136 YSVTTKPHQPTPGQY 150
>gi|12847222|dbj|BAB27483.1| unnamed protein product [Mus musculus]
Length = 561
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 24/214 (11%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FRE E+A +++L GR++ GR I
Sbjct: 290 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 346
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQ--LFGRYRRRHSRSRSRS 149
+ TD++ E G+ F++ SR LRR + G R SR R S
Sbjct: 347 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEASRGLRRMDSIAGSERPGPSRMRHFS 404
Query: 150 RSPYRHRSHEDRSHSGHG-RRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPV 208
P + +G D +K+ ++ S + + GG P
Sbjct: 405 EHPSMSNMKAQEATTGMAFEETIDENKFEKAEEGGESEGDASEKDAKE---GGSDGDHPE 461
Query: 209 REGSE------------ERRAKIEQWNREREQQE 230
REG E ER + E+ N + E QE
Sbjct: 462 REGGEGCSKKENEEGCPERALEPEEGNPQTEAQE 495
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYGEI + I D G +V+++ E++A +A++ L GR G
Sbjct: 26 FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDG 85
Query: 87 RPIIVDFS 94
R I+V F+
Sbjct: 86 REIMVQFA 93
>gi|403164040|ref|XP_003324121.2| hypothetical protein PGTG_06023 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164717|gb|EFP79702.2| hypothetical protein PGTG_06023 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 294
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL E ++YG++E + I D +D G +V R+ + A+ + L+G GRPI VD
Sbjct: 77 DLEAEFSRYGKVEKVVIVYDQRSDRSRGFGFVTMRDVQDASACISELNGLDLHGRPIRVD 136
Query: 93 FSPVTDFREATCRQY 107
+S T + T QY
Sbjct: 137 YSVTTKPHQPTPGQY 151
>gi|297745915|emb|CBI15971.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL ++YGEI +N+ D G +V + ++ A+ +L+G GR I VD
Sbjct: 51 DLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVD 110
Query: 93 FSPVTDF--------------REA--TCRQYEENTCNRGGYCNFMH 122
V+++ REA CR ++ CNRG C F H
Sbjct: 111 H--VSNYKKKEEEDEETERQKREARGVCRAFQRGECNRGAGCKFSH 154
>gi|23956212|ref|NP_082518.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|321267528|ref|NP_083647.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|81913100|sp|Q8BGC0.1|HTSF1_MOUSE RecName: Full=HIV Tat-specific factor 1 homolog
gi|22902415|gb|AAH37711.1| HIV TAT specific factor 1 [Mus musculus]
gi|26340228|dbj|BAC33777.1| unnamed protein product [Mus musculus]
gi|148710215|gb|EDL42161.1| HIV TAT specific factor 1, isoform CRA_a [Mus musculus]
Length = 757
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 12/185 (6%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FRE E+A +++L GR++ GR I
Sbjct: 290 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 346
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQ--LFGRYRRRHSRSRSRS 149
+ TD++ E G+ F++ SR LRR + G R SR R S
Sbjct: 347 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEASRGLRRMDSIAGSERPGPSRMRHFS 404
Query: 150 RSPYRHRSHEDRSHSGHG-RRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPV 208
P + +G D +K+ ++ S + + GG P
Sbjct: 405 EHPSMSNMKAQEATTGMAFEETIDENKFEKAEEGGESEGDASEKDAKE---GGSDGDHPE 461
Query: 209 REGSE 213
REG E
Sbjct: 462 REGGE 466
>gi|148710216|gb|EDL42162.1| HIV TAT specific factor 1, isoform CRA_b [Mus musculus]
Length = 793
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 24/214 (11%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FRE E+A +++L GR++ GR I
Sbjct: 326 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 382
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQ--LFGRYRRRHSRSRSRS 149
+ TD++ E G+ F++ SR LRR + G R SR R S
Sbjct: 383 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEASRGLRRMDSIAGSERPGPSRMRHFS 440
Query: 150 RSPYRHRSHEDRSHSGHG-RRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPV 208
P + +G D +K+ ++ S + + GG P
Sbjct: 441 EHPSMSNMKAQEATTGMAFEETIDENKFEKAEEGGESEGDASEKDAKE---GGSDGDHPE 497
Query: 209 REGSE------------ERRAKIEQWNREREQQE 230
REG E ER + E+ N + E QE
Sbjct: 498 REGGEGCSKKENEEGCPERALEPEEGNPQTEAQE 531
>gi|403222792|dbj|BAM40923.1| RNA splicing factor [Theileria orientalis strain Shintoku]
Length = 649
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 26 EHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYA 85
+ F++ +D+ EE KYGE+ + + D G VYV+FR A A KSL GR++A
Sbjct: 573 DFFDEIEDDVREECKKYGEVVKVYLNRRKPD---GKVYVKFRSNTDAQTAHKSLQGRYFA 629
Query: 86 GRPIIVDF 93
G I V +
Sbjct: 630 GNTIQVGY 637
>gi|156404394|ref|XP_001640392.1| predicted protein [Nematostella vectensis]
gi|156227526|gb|EDO48329.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 5 LDMITPG------VDAQGNPLDPRKI--QEHFEDFYEDLFEELNKYGEIESLNICDNLAD 56
+ M PG V A N + P ++ E FE+ Y+D+ EE +KYG ++S+ I +
Sbjct: 220 ISMAVPGAVAATEVLALMNMVTPDELGDDEEFEEIYDDVREECSKYGRVKSMEIPRPMEG 279
Query: 57 HM----VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 95
M VG ++V+F + A +A +L GR +A R ++ + P
Sbjct: 280 LMEPPGVGKIFVEFSSIDDAKKAAAALGGRKFANRVVVTSYYP 322
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYGEI + I D G +V+++ E++A +A+ L GR G
Sbjct: 26 FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDG 85
Query: 87 RPIIVDFS 94
R I+V F+
Sbjct: 86 REIMVQFA 93
>gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster]
Length = 449
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 34 DLFEELNKYGEIESLNI---CDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPII 90
D+ +E K+GE+ S+ I G V+VQF E + +ALK+LSGR ++GR ++
Sbjct: 375 DIKQECAKFGEVRSIKIPRPIGQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVM 434
Query: 91 VDF 93
+
Sbjct: 435 TSY 437
>gi|24659166|ref|NP_611769.2| large subunit 2 [Drosophila melanogaster]
gi|7291545|gb|AAF46969.1| large subunit 2 [Drosophila melanogaster]
gi|201066057|gb|ACH92438.1| FI08027p [Drosophila melanogaster]
Length = 449
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 34 DLFEELNKYGEIESLNI---CDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPII 90
D+ +E K+GE+ S+ I G V+VQF E + +ALK+LSGR ++GR ++
Sbjct: 375 DIKQECAKFGEVRSIKIPRPIGQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVM 434
Query: 91 VDF 93
+
Sbjct: 435 TSY 437
>gi|148710217|gb|EDL42163.1| HIV TAT specific factor 1, isoform CRA_c [Mus musculus]
Length = 464
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 80/200 (40%), Gaps = 12/200 (6%)
Query: 18 PLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALK 77
P+D + EDL E +K+G+I L + D H G V FRE E+A ++
Sbjct: 178 PMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQ 234
Query: 78 SLSGRFYAGRPIIVD-FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQ--L 134
+L GR++ GR I + TD++ E G+ F++ SR LRR +
Sbjct: 235 TLDGRWFGGRQITAQAWDGTTDYQ--VEETSREREERLRGWEAFLNAPEASRGLRRMDSI 292
Query: 135 FGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHG-RRYDDRDKYYESRSRRHRSTSPSHRR 193
G R SR R S P + +G D +K+ ++ S +
Sbjct: 293 AGSERPGPSRMRHFSEHPSMSNMKAQEATTGMAFEETIDENKFEKAEEGGESEGDASEKD 352
Query: 194 GRSRSPGGRRYHSPVREGSE 213
+ GG P REG E
Sbjct: 353 AKE---GGSDGDHPEREGGE 369
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYGEI + I D G +V+++ E++A +A++ L GR G
Sbjct: 26 FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDG 85
Query: 87 RPIIVDFS 94
R I+V F+
Sbjct: 86 REIMVQFA 93
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYGEI + I D G +V+++ E++A +A+ L GR G
Sbjct: 26 FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDG 85
Query: 87 RPIIVDFS 94
R I+V F+
Sbjct: 86 REIMVQFA 93
>gi|299470157|emb|CBN78185.1| hypothetical protein Esi_0103_0024 [Ectocarpus siliculosus]
Length = 1504
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 16/121 (13%)
Query: 132 RQLFGRYRRRHSR--SRSRSRSPYRHRSHEDRSHSGHGRRYDDRD-KYYESRSRRHRSTS 188
R L G Y H+ ++ RS H E R S ++ R K + RSR RSTS
Sbjct: 43 RDLIGDYEEAHNLRLPKAIGRSGQNHAGKEARKVSTVTKQSTSRSRKSWSPRSRARRSTS 102
Query: 189 PSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINN 248
PS RR RS SP +G+ R ++ R++ EEAY+ N GG ++G+ N
Sbjct: 103 PSQRRSIDRS------LSPEPKGTAGERGQL-----HRDEDEEAYEVNKGGG--EEGLKN 149
Query: 249 D 249
D
Sbjct: 150 D 150
>gi|402083585|gb|EJT78603.1| hypothetical protein GGTG_03702 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 327
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 30/205 (14%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
H+E EDL N G I L++ + + G YV + + A A+K G AG
Sbjct: 110 HYELTEEDLQGLFNGIGPIRELDLVYDRSGRSEGTAYVVYESYKDATLAVKEFDGANAAG 169
Query: 87 RPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSR 146
+PI + P + R+ +T + G R L ++ HS SR
Sbjct: 170 QPIRLTILPSG----PSSRRNPFDTAIKPG-----------RPLSERIT-----THS-SR 208
Query: 147 SRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHS 206
+RS SP R D + G D+Y SR +P R G R PG RR
Sbjct: 209 TRSLSP-RQELEADAARKGI-------DRYIPGGSRSRSPYAPPRREG-GRRPGARRERG 259
Query: 207 PVREGSEERRAKIEQWNREREQQEE 231
+ SEE + E+ R ++ QEE
Sbjct: 260 GRSQQSEESAGRGERNTRPKKTQEE 284
>gi|427789501|gb|JAA60202.1| Putative splicing factor u2af large subunit rrm superfamily
[Rhipicephalus pulchellus]
Length = 462
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 30 DFYEDLFEELNKYGEIESLNI---CDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
D ED+ EE NKYG ++S+ I D + G YV+F +A +SL+GR ++
Sbjct: 385 DILEDIHEECNKYGVVKSIEIPRPIDGVEVPGCGKAYVEFNSVIDCQKAQQSLTGRKFSN 444
Query: 87 RPIIVDF 93
R ++ +
Sbjct: 445 RVVVTSY 451
>gi|321252695|ref|XP_003192495.1| hypothetical protein CGB_B2920W [Cryptococcus gattii WM276]
gi|317458963|gb|ADV20708.1| Hypothetical protein CGB_B2920W [Cryptococcus gattii WM276]
Length = 286
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL +E +YG++E + I D D G ++ R E AAR ++ L+G GR I VD
Sbjct: 97 DLEDEFMRYGDVEKVVIVYDQRTDRSRGFGFITMRTTEDAARCIEKLNGLSLHGRNIRVD 156
Query: 93 FSPVTDFREATCRQY 107
+S +T QY
Sbjct: 157 YSATQKPHSSTPGQY 171
>gi|256091162|ref|XP_002581498.1| hypothetical protein [Schistosoma mansoni]
Length = 60
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 112 CNRGGYCNFMHLKRISRDLRRQLF 135
C RGG+CNFMHLK ISR+L R+L+
Sbjct: 2 CTRGGFCNFMHLKPISRELCRKLY 25
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYG++ + I D G +V+++ E+A +A+ L GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQKAVDRLDGRVVDG 84
Query: 87 RPIIVDFS 94
R I+V F+
Sbjct: 85 REIMVQFA 92
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
ED +FE +G+I++L I +L+ G YV FR + A RA++ ++G AGRP
Sbjct: 365 EDMLRRIFE---PFGKIDTLEIATDLSGVSKGYAYVTFRHADDAKRAMEQMNGFELAGRP 421
Query: 89 IIV 91
+ V
Sbjct: 422 MKV 424
>gi|348557907|ref|XP_003464760.1| PREDICTED: LOW QUALITY PROTEIN: HIV Tat-specific factor 1 homolog
[Cavia porcellus]
Length = 752
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E K+G+I+ L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 289 EDLRVECAKFGQIKKLLLFDR---HPDGVASVSFRDAEEADHCIQTLDGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR-------QLFGRYRRRH 142
+ TD++ + E G+ F++ +R L+R ++ G R RH
Sbjct: 346 AWDGTTDYQVEETSREREERLK--GWEAFLNAPEANRSLQRSDSVSASEMAGPSRARH 401
>gi|351695595|gb|EHA98513.1| HIV Tat-specific factor 1-like protein [Heterocephalus glaber]
Length = 728
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
+DL E +K+G+I+ L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 286 DDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPEEADHCIQTLDGRWFGGRQITAQ 342
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR-------QLFGRYRRRH 142
+ TD++ + E G+ F+ +R LRR ++ G R RH
Sbjct: 343 PWDGTTDYQVEETAREREERLK--GWEAFLSTPEANRGLRRSDSVSASEMAGPSRMRH 398
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
ED +FE +G+I++L I +L+ G YV FR + A RA++ ++G AGRP
Sbjct: 282 EDMLRRIFE---PFGKIDTLEIATDLSGVSKGYAYVTFRHADDAKRAMEQMNGFELAGRP 338
Query: 89 IIV 91
+ V
Sbjct: 339 MKV 341
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 33 EDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIV 91
+DLF +KYGEI + I D G +V+++ E++A +A+ L GR GR I+V
Sbjct: 31 DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMV 90
Query: 92 DFS 94
F+
Sbjct: 91 QFA 93
>gi|344297715|ref|XP_003420542.1| PREDICTED: HIV Tat-specific factor 1 homolog [Loxodonta africana]
Length = 743
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I+ L + D H G V FR+ E+A + +L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIKKLILFDR---HPDGVASVSFRDPEEADYCIHTLDGRWFGGRQITAE 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSR 148
+ TD++ + E G+ F++ +R RR R SR R
Sbjct: 346 AWDGTTDYQVEETTREREERLR--GWEAFLNEPEANRGFRRSNLASASERAGPSRVR 400
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYGE+ + I D G +V+++ E++A +A+ L GR G
Sbjct: 25 FRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDG 84
Query: 87 RPIIVDFS 94
R ++V F+
Sbjct: 85 REMMVQFA 92
>gi|354475309|ref|XP_003499872.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cricetulus griseus]
Length = 714
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E K+G+I+ L + D H G V FRE E+A +++L GR++ GR I +
Sbjct: 216 EDLRVECAKFGQIKKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITAE 272
Query: 93 -FSPVTDFR 100
+ TD++
Sbjct: 273 AWDGTTDYQ 281
>gi|344247059|gb|EGW03163.1| HIV Tat-specific factor 1-like [Cricetulus griseus]
Length = 528
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P +D + +PL +I+E DL E K+G+I+ L + D H G V F
Sbjct: 12 MFHP-MDFEDDPLVLNEIRE-------DLRVECAKFGQIKKLLLFDR---HPDGVASVSF 60
Query: 67 REEEQAARALKSLSGRFYAGRPIIVD-FSPVTDFR 100
RE E+A +++L GR++ GR I + + TD++
Sbjct: 61 REPEEADYCIQTLDGRWFGGRQITAEAWDGTTDYQ 95
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYG++ + I D G +V+++ +++A +A++ L GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYQDEAQKAVEKLDGRVVDG 84
Query: 87 RPIIVDFS 94
R I+V F+
Sbjct: 85 REIMVRFA 92
>gi|58258445|ref|XP_566635.1| hypothetical protein CNA02490 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222772|gb|AAW40816.1| hypothetical protein CNA02490 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 287
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL +E +YG++E + I D D G ++ R + AAR ++ L+G GR I VD
Sbjct: 97 DLEDEFMRYGDVEKVVIVYDQRTDRSRGFGFITMRTVDDAARCIEKLNGLSLHGRNIRVD 156
Query: 93 FSPVTDFREATCRQY 107
+S +T QY
Sbjct: 157 YSATQKPHSSTPGQY 171
>gi|157818333|ref|NP_001101729.1| HIV-1 Tat specific factor 1 [Rattus norvegicus]
gi|149015808|gb|EDL75132.1| HIV TAT specific factor 1 (predicted) [Rattus norvegicus]
Length = 776
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIV 91
EDL E +K+G+I L + D H G V FRE E+A +++L GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADNCIQTLDGRWFGGRQITA 344
>gi|1667611|gb|AAB18823.1| Tat-SF1 [Homo sapiens]
Length = 754
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRR-HSRSRSRSR 150
+ TD++ E G+ F++ +R L Q+ R+ SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLSVQILSLLRKAGPSRARHFSE 403
Query: 151 SPYRHRSHEDRSHSG 165
P + + + +G
Sbjct: 404 HPSTSKMNAQETATG 418
>gi|170038926|ref|XP_001847298.1| U2 snrnp auxiliary factor [Culex quinquefasciatus]
gi|167862539|gb|EDS25922.1| U2 snrnp auxiliary factor [Culex quinquefasciatus]
Length = 398
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 10 PGVDAQGNP---------LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG 60
P +D + NP D ++ + +F+ D+ E +G I + +C N A H+ G
Sbjct: 204 PALDDRNNPEYGTDSGIEFDEDELYRCYNEFFHDIIAEFESFGLIRYIFVCRNHAVHLRG 263
Query: 61 NVYVQF 66
NV++Q+
Sbjct: 264 NVFIQY 269
>gi|86438143|gb|AAI12691.1| HTATSF1 protein [Bos taurus]
Length = 524
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSR 148
+ TD++ + E G+ F++ +R L+R R R SR R
Sbjct: 346 AWDGTTDYQVEETTREREERMR--GWEAFLNAPEANRGLQRSNSIRAPERAGPSRVR 400
>gi|345807273|ref|XP_538183.3| PREDICTED: HIV Tat-specific factor 1 homolog [Canis lupus
familiaris]
Length = 768
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P +D + +PL +I+E DL E +K+G+I L + D H G V F
Sbjct: 271 MFHP-MDFEDDPLVLNEIRE-------DLRVECSKFGQIRKLLLFDR---HPDGVASVSF 319
Query: 67 REEEQAARALKSLSGRFYAGRPIIVD-FSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
R+ E+A +++L GR++ GR I + TD++ + E G+ F++
Sbjct: 320 RDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETTREREERLR--GWEAFLNAPE 377
Query: 126 ISRDLRR--QLFGRYRRRHSRSRSRSRSP 152
+R LRR + R SR R S P
Sbjct: 378 ANRSLRRSNSICASERAGPSRVRHFSERP 406
>gi|402226431|gb|EJU06491.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 304
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL E N+YG +E + I D +D G ++Q E A + + L+GR GR I VD
Sbjct: 87 DLEELFNQYGTVEHVTIVYDQRSDRSRGFGFIQMATVEDATKCISELNGRDVNGRNIRVD 146
Query: 93 FS 94
+S
Sbjct: 147 YS 148
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 34 DLFEELNKYGEIESLNICDNLAD-HMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL +KYGE+ I N + H G +V+FR+EE A +A++ + GR GR I V
Sbjct: 42 DLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEEDARKAMEEMDGREVDGRSITVQ 101
Query: 93 FS 94
F+
Sbjct: 102 FA 103
>gi|330340363|ref|NP_001193343.1| HIV Tat-specific factor 1 [Bos taurus]
Length = 773
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSR 148
+ TD++ + E G+ F++ +R L+R R R SR R
Sbjct: 346 AWDGTTDYQVEETTREREERLR--GWEAFLNAPEANRGLQRSNSIRAPERAGPSRVR 400
>gi|296481686|tpg|DAA23801.1| TPA: HIV-1 Tat specific factor 1-like [Bos taurus]
Length = 766
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P VD + +PL +I+E DL E +K+G+I L + D H G V F
Sbjct: 271 MFHP-VDFEDDPLVLNEIRE-------DLRVECSKFGQIRKLLLFDR---HPDGVASVSF 319
Query: 67 REEEQAARALKSLSGRFYAGRPIIVD-FSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
R E+A +++L+GR++ GR I + TD + E G+ F++
Sbjct: 320 RSPEEADYCIQTLNGRWFGGRQITAQAWDGTTDCQVEETTSEREERLR--GWEAFLNAPE 377
Query: 126 ISRDLRRQLFGRYRRRHSRSRSR 148
+R L+R R R SR R
Sbjct: 378 ANRGLQRSDSIRAPERAGSSRVR 400
>gi|301769097|ref|XP_002919964.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ailuropoda
melanoleuca]
Length = 767
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P +D + +PL +I+E DL E +K+G+I L + D H G V F
Sbjct: 271 MFHP-MDFEDDPLVLNEIRE-------DLRVECSKFGQIRKLLLFDR---HPDGVASVSF 319
Query: 67 REEEQAARALKSLSGRFYAGRPIIVD-FSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
R+ E+A +++L GR++ GR I + TD++ + E G+ F++
Sbjct: 320 RDPEEADYCIQTLDGRWFGGRQITAQAWDGATDYQVEETTREREERLR--GWEAFLNAPE 377
Query: 126 ISRDLRR 132
+R LRR
Sbjct: 378 ANRGLRR 384
>gi|21361437|ref|NP_055315.2| HIV Tat-specific factor 1 [Homo sapiens]
gi|253970456|ref|NP_001156752.1| HIV Tat-specific factor 1 [Homo sapiens]
gi|74754346|sp|O43719.1|HTSF1_HUMAN RecName: Full=HIV Tat-specific factor 1; Short=Tat-SF1
gi|14602772|gb|AAH09896.1| HIV-1 Tat specific factor 1 [Homo sapiens]
gi|30582611|gb|AAP35532.1| HIV TAT specific factor 1 [Homo sapiens]
gi|61362248|gb|AAX42186.1| HIV TAT specific factor 1 [synthetic construct]
gi|119608874|gb|EAW88468.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|119608875|gb|EAW88469.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|157929022|gb|ABW03796.1| HIV-1 Tat specific factor 1 [synthetic construct]
Length = 755
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P +D + +PL +I+E DL E +K+G+I L + D H G V F
Sbjct: 271 MFHP-MDFEDDPLVLNEIRE-------DLRVECSKFGQIRKLLLFDR---HPDGVASVSF 319
Query: 67 REEEQAARALKSLSGRFYAGRPIIVD-FSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
R+ E+A +++L GR++ GR I + TD++ E G+ F++
Sbjct: 320 RDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQ--VEETSREREERLRGWEAFLNAPE 377
Query: 126 ISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYD---DRDKYYESRSR 182
+R LRR R SR+R S + S + + G ++ D K+ ++
Sbjct: 378 ANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDG 437
Query: 183 RHRSTSPSHRRGRSRSP 199
S + SP
Sbjct: 438 GEFEEGASENNAKESSP 454
>gi|405117618|gb|AFR92393.1| transformer-2-beta isoform 3 [Cryptococcus neoformans var. grubii
H99]
Length = 307
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL +E +YG++E + I D D G ++ R E AAR ++ L+G GR I VD
Sbjct: 118 DLEDEFMRYGDVEKVVIVYDQRTDRSRGFGFITMRTVEDAARCIEKLNGLSLHGRNIRVD 177
Query: 93 FSPVTDFREATCRQY 107
+S +T QY
Sbjct: 178 YSATQKPHSSTPGQY 192
>gi|291408295|ref|XP_002720372.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 1 [Oryctolagus
cuniculus]
Length = 770
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I+ L + D H G V FR+ E+A +++L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAE 345
Query: 93 -FSPVTDFR 100
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|397482309|ref|XP_003812372.1| PREDICTED: HIV Tat-specific factor 1 [Pan paniscus]
gi|410211494|gb|JAA02966.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410261782|gb|JAA18857.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410304122|gb|JAA30661.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410333195|gb|JAA35544.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
Length = 755
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P +D + +PL +I+E DL E +K+G+I L + D H G V F
Sbjct: 271 MFHP-MDFEDDPLVLNEIRE-------DLRVECSKFGQIRKLLLFDR---HPDGVASVSF 319
Query: 67 REEEQAARALKSLSGRFYAGRPIIVD-FSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
R+ E+A +++L GR++ GR I + TD++ E G+ F++
Sbjct: 320 RDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQ--VEETSREREERLRGWEAFLNAPE 377
Query: 126 ISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYD---DRDKYYESRSR 182
+R LRR R SR+R S + S + + G ++ D K+ ++
Sbjct: 378 ANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDG 437
Query: 183 RHRSTSPSHRRGRSRSP 199
S + SP
Sbjct: 438 GEFEEGASENNAKESSP 454
>gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT specific factor 1 [synthetic construct]
gi|60653905|gb|AAX29645.1| HIV TAT specific factor 1 [synthetic construct]
gi|60653907|gb|AAX29646.1| HIV TAT specific factor 1 [synthetic construct]
Length = 756
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 151
+ TD++ E G+ F++ +R LRR R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 152 PYRHRSHEDRSHSGHGRRYD---DRDKYYESRSRRHRSTSPSHRRGRSRSP 199
+ S + + G ++ D K+ ++ S + SP
Sbjct: 404 EHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSP 454
>gi|431891353|gb|ELK02229.1| HIV Tat-specific factor 1 like protein [Pteropus alecto]
Length = 786
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P +D + +PL +I+E DL E +K+G+I L + D H G V F
Sbjct: 270 MFHP-MDFEDDPLVLNEIRE-------DLRVECSKFGQIRKLLLFDR---HPDGVASVSF 318
Query: 67 REEEQAARALKSLSGRFYAGRPIIVD-FSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
R+ E+A +++L GR++ GR I + TD++ + E G+ F++
Sbjct: 319 RDPEEADYCIQTLDGRWFGGRQITAQVWDGTTDYQVEETTREREERLK--GWEAFLNAPE 376
Query: 126 ISRDLRR--QLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHG 167
++ LRR + R SR R S P + + +G
Sbjct: 377 ANKGLRRSNSICASERAGPSRIRHFSEHPSTSKMIAQEAATGMA 420
>gi|197102050|ref|NP_001125576.1| HIV Tat-specific factor 1 homolog [Pongo abelii]
gi|75070769|sp|Q5RB63.1|HTSF1_PONAB RecName: Full=HIV Tat-specific factor 1 homolog
gi|55728510|emb|CAH90997.1| hypothetical protein [Pongo abelii]
Length = 754
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 151
+ TD++ E G+ F++ +R LRR R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 152 PYRHRSHEDRSHSGHGRRYD---DRDKYYESRSRRHRSTSPSHRRGRSRSP 199
+ S + + G ++ D K+ ++ S + SP
Sbjct: 404 EHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSP 454
>gi|62088186|dbj|BAD92540.1| HIV TAT specific factor 1 variant [Homo sapiens]
Length = 758
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 292 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 348
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 151
+ TD++ E G+ F++ +R LRR R SR+R S
Sbjct: 349 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 406
Query: 152 PYRHRSHEDRSHSGHGRRYD---DRDKYYESRSRRHRSTSPSHRRGRSRSP 199
+ S + + G ++ D K+ ++ S + SP
Sbjct: 407 EHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSP 457
>gi|332246954|ref|XP_003272619.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Nomascus
leucogenys]
Length = 754
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 151
+ TD++ E G+ F++ +R LRR R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 152 PYRHRSHEDRSHSGHGRRYD---DRDKYYESRSRRHRSTSPSHRRGRSRSP 199
+ S + + G ++ D K+ ++ S + SP
Sbjct: 404 EHPSTSKMNVQETATGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSP 454
>gi|297304889|ref|XP_001082302.2| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Macaca
mulatta]
gi|355705198|gb|EHH31123.1| hypothetical protein EGK_20983 [Macaca mulatta]
Length = 754
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 151
+ TD++ E G+ F++ +R LRR R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 152 PYRHRSHEDRSHSGHGRRYDD 172
+ S + + G +++
Sbjct: 404 EHPSTSKMNAQETATGMAFEE 424
>gi|355757742|gb|EHH61267.1| hypothetical protein EGM_19235 [Macaca fascicularis]
Length = 754
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 151
+ TD++ E G+ F++ +R LRR R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 152 PYRHRSHEDRSHSGHGRRYDD 172
+ S + + G +++
Sbjct: 404 EHPSTSKMNAQETATGMAFEE 424
>gi|194387946|dbj|BAG61386.1| unnamed protein product [Homo sapiens]
Length = 721
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 151
+ TD++ E G+ F++ +R LRR R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 152 PYRHRSHEDRSHSGHGRRYD---DRDKYYESRSRRHRSTSPSHRRGRSRSP 199
+ S + + G ++ D K+ ++ S + SP
Sbjct: 404 EHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSP 454
>gi|426397566|ref|XP_004064985.1| PREDICTED: HIV Tat-specific factor 1 [Gorilla gorilla gorilla]
Length = 755
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 151
+ TD++ E G+ F++ +R LRR R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 152 PYRHRSHEDRSHSGHGRRYD---DRDKYYESRSRRHRSTSPSHRRGRSRSP 199
+ S + + G ++ D K+ ++ S + SP
Sbjct: 404 EHPSTSKMNAQETATGMVFEEPIDEKKFEKTEDGGEFEEGASENNAKESSP 454
>gi|409050086|gb|EKM59563.1| hypothetical protein PHACADRAFT_250155 [Phanerochaete carnosa
HHB-10118-sp]
Length = 277
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL EE +++G +E + I D +D G ++ E+A+R +K L+G GR I VD
Sbjct: 91 DLDEEFSRFGRVEKVVIVYDQRSDRSRGFGFITMSTVEEASRCIKELNGVELNGRRIRVD 150
Query: 93 FSPVTD 98
+S VTD
Sbjct: 151 YS-VTD 155
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYG++ + I D G +V+++ ++A +A++ L GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDG 84
Query: 87 RPIIVDFS 94
R I V F+
Sbjct: 85 REITVQFA 92
>gi|402911564|ref|XP_003918392.1| PREDICTED: HIV Tat-specific factor 1 homolog [Papio anubis]
Length = 645
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 14/167 (8%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P +D + +PL +I+E DL E +K+G+I L + D H G V F
Sbjct: 166 MFHP-MDFEDDPLVLNEIRE-------DLRVECSKFGQIRKLLLFDR---HPDGVASVSF 214
Query: 67 REEEQAARALKSLSGRFYAGRPIIVD-FSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
R+ E+A +++L GR++ GR I + TD++ E G+ F++
Sbjct: 215 RDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQ--VEETSREREERLRGWEAFLNAPE 272
Query: 126 ISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDD 172
+R LRR R SR+R S + S + + G +++
Sbjct: 273 ANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETATGMAFEE 319
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYG++ + I D G +V+++ ++A +A++ L GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDG 84
Query: 87 RPIIVDFS 94
R I V F+
Sbjct: 85 REITVQFA 92
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYG++ + I D G +V+++ ++A++A+ L GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDG 84
Query: 87 RPIIVDFS 94
R I V F+
Sbjct: 85 REITVQFA 92
>gi|427780651|gb|JAA55777.1| Putative nuclear receptor coactivator 5 strongylocentrotus
purpuratus [Rhipicephalus pulchellus]
Length = 365
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
+++H E EDL + +KYGEI+ +++ H G +VQF+EE +A A+K G F
Sbjct: 24 LKKHIE--REDLQKLFSKYGEIQGISL------HKGGFGFVQFKEEGEAEAAVKGEGGVF 75
Query: 84 YAG 86
+ G
Sbjct: 76 FKG 78
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYG++ + I D G +V+++ ++A++A+ L GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDG 84
Query: 87 RPIIVDFS 94
R I V F+
Sbjct: 85 REITVQFA 92
>gi|427786733|gb|JAA58818.1| Putative nuclear receptor coactivator 5 strongylocentrotus
purpuratus [Rhipicephalus pulchellus]
Length = 643
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 30/138 (21%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
+++H E EDL + +KYGEI+ +++ H G +VQF+EE +A A+K G F
Sbjct: 24 LKKHIE--REDLQKLFSKYGEIQGISL------HKGGFGFVQFKEEGEAEAAVKGEGGVF 75
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHS 143
+ G + C + RGG SR+ R + + RRH
Sbjct: 76 FKG----------CLLQLRVCSSQDSRRSFRGG----------SRERDRD-YSDHDRRHE 114
Query: 144 RSRSRSRSPYRHRSHEDR 161
R RSP HR +++R
Sbjct: 115 PGMPRDRSPV-HRDYDER 131
>gi|218198724|gb|EEC81151.1| hypothetical protein OsI_24062 [Oryza sativa Indica Group]
Length = 431
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 6 DMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGN---- 61
D+ + Q N L R++ + +D EDL+ + +G + S I + D+ G+
Sbjct: 231 DIPDAEIKPQDNVLFVRELNKVTQD--EDLYTIFSHFGSVTSAEI---IRDYKTGDSLCF 285
Query: 62 VYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFM 121
+++F ++E RA + R I VDFS + RQ + N N+ G
Sbjct: 286 AFIEFEKKEACERAFFMMDNCLIDDRRIRVDFSQSVSKQWRQFRQSKSNA-NKDGCFKCG 344
Query: 122 HLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRS 181
L I+RD + R+ +++ P E+ SG+ RR +ESRS
Sbjct: 345 ALDLIARDCDQ-----------RAEQKNKGPNYILKDENTQRSGNKRR-----SKHESRS 388
Query: 182 R------RHRSTSPSHRRGRSRSPGGRRY 204
+ +R S R GR + G RRY
Sbjct: 389 KYRDGDDDYRRQSGGSRYGRDKCDGERRY 417
>gi|426257498|ref|XP_004022363.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ovis aries]
Length = 774
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E +K+G+I L + D H G V F++ E+A +++L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFKDPEEADYCIQTLNGRWFGGRQITAQ 345
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSR 148
+ TD++ + E G+ F++ +R L+R R R SR R
Sbjct: 346 AWDGTTDYQVEETTREREERLR--GWEAFLNAPEANRGLQRSNSIRAPERAGPSRVR 400
>gi|427779747|gb|JAA55325.1| Putative nuclear receptor coactivator 5 strongylocentrotus
purpuratus [Rhipicephalus pulchellus]
Length = 608
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 30/138 (21%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRF 83
+++H E EDL + +KYGEI+ +++ H G +VQF+EE +A A+K G F
Sbjct: 24 LKKHIE--REDLQKLFSKYGEIQGISL------HKGGFGFVQFKEEGEAEAAVKGEGGVF 75
Query: 84 YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHS 143
+ G + C + RGG SR+ R + + RRH
Sbjct: 76 FKG----------CLLQLRVCSSQDSRRSFRGG----------SRERDRD-YSDHDRRHE 114
Query: 144 RSRSRSRSPYRHRSHEDR 161
R RSP HR +++R
Sbjct: 115 PGMPRDRSPV-HRDYDER 131
>gi|440907708|gb|ELR57819.1| HIV Tat-specific factor 1 [Bos grunniens mutus]
Length = 766
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P VD + +PL +I+E DL E +K+G+I L + D H G V F
Sbjct: 271 MFHP-VDFEDDPLVLNEIRE-------DLRVECSKFGQIRKLLLFDR---HPDGVASVSF 319
Query: 67 REEEQAARALKSLSGRFYAGRPIIV 91
R E+A +++L+GR++ GR I
Sbjct: 320 RSPEEADYCIQTLNGRWFGGRQITA 344
>gi|410989518|ref|XP_004001008.1| PREDICTED: HIV Tat-specific factor 1 homolog [Felis catus]
Length = 780
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL E K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 303 EDLRVECAKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 359
Query: 93 -FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRR--QLFGRYRRRHSRSRSRS 149
+ TD++ + E G+ F++ +R LRR + R SR R S
Sbjct: 360 AWDGTTDYQVEETTREREERLR--GWEAFLNAPEANRGLRRSNSVCASERAGPSRVRHFS 417
Query: 150 RSP 152
P
Sbjct: 418 EHP 420
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF +KYG++ + I D G +V+++ ++A +A++ L GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDG 84
Query: 87 RPIIVDFS 94
R I V F+
Sbjct: 85 REITVQFA 92
>gi|417404468|gb|JAA48986.1| Putative transcription elongation factor tat-sf1 [Desmodus
rotundus]
Length = 766
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P +D + +PL +I+E DL E +K+G+I+ L + D H G V F
Sbjct: 271 MFHP-MDFEDDPLVLNEIRE-------DLRVECSKFGQIKKLLLFDR---HPDGVASVSF 319
Query: 67 REEEQAARALKSLSGRFYAGRPIIV 91
R E+A +++L GR++ GR I
Sbjct: 320 RNPEEADHCIQTLDGRWFGGRQITA 344
>gi|449550007|gb|EMD40972.1| hypothetical protein CERSUDRAFT_111545 [Ceriporiopsis subvermispora
B]
Length = 286
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL +E +++G ++ + I D +D G ++ E+A R +K L+G GR I VD
Sbjct: 94 DLDDEFSRFGRVDKVTIVYDQRSDRSRGFGFITMSTTEEAGRCIKELNGVELNGRRIRVD 153
Query: 93 FSPVTD 98
+S VTD
Sbjct: 154 YS-VTD 158
>gi|336386026|gb|EGO27172.1| hypothetical protein SERLADRAFT_434943 [Serpula lacrymans var.
lacrymans S7.9]
Length = 284
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL EE +++G +E + I D +D G +++ E+A R ++ L+G GR I VD
Sbjct: 98 DLDEEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVEEATRCIQELNGVDLNGRRIRVD 157
Query: 93 FSPVTD 98
+S VTD
Sbjct: 158 YS-VTD 162
>gi|444705508|gb|ELW46932.1| HIV Tat-specific factor 1 like protein [Tupaia chinensis]
Length = 623
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIV 91
EDL E +K+G+I+ L + D H G V FR+ ++A +++L GR++ GR I
Sbjct: 168 EDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPDEADLCIQTLDGRWFGGRQITA 223
>gi|291510230|gb|ADE10071.1| RRM [Tremella fuciformis]
Length = 326
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL +E +YGE+E + I D D G ++ R E A ++ L+G GR + VD
Sbjct: 134 DLEDEFARYGEVEKVVIVYDQRTDRSRGFGFITMRTVEDAQLCVEKLNGLLLHGRAVRVD 193
Query: 93 FS 94
FS
Sbjct: 194 FS 195
>gi|296236526|ref|XP_002763352.1| PREDICTED: HIV Tat-specific factor 1 homolog [Callithrix jacchus]
Length = 744
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIV 91
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 290 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 345
>gi|403300078|ref|XP_003940786.1| PREDICTED: HIV Tat-specific factor 1 homolog [Saimiri boliviensis
boliviensis]
Length = 743
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIV 91
EDL E +K+G+I L + D H G V FR+ E+A +++L GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
>gi|393245975|gb|EJD53484.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 288
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL EE +YG +E + I D +D G +++ E A R + L+G GR I VD
Sbjct: 102 DLDEEFARYGAVEKVTIVYDQRSDRSRGFGFIRMATVEDAQRCIDKLNGIELNGRRIRVD 161
Query: 93 FSPVTD 98
FS VTD
Sbjct: 162 FS-VTD 166
>gi|395860822|ref|XP_003802703.1| PREDICTED: HIV Tat-specific factor 1 homolog [Otolemur garnettii]
Length = 767
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 7 MITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
M P +D + +PL +I+E DL E +K+G+I L + D H G V F
Sbjct: 271 MFHP-MDFEDDPLVLNEIRE-------DLRVECSKFGQIRKLLLFDR---HPDGVASVSF 319
Query: 67 REEEQAARALKSLSGRFYAGRPIIVD-FSPVTDFR 100
R+ E+A + +L+GR++ GR I + + TD++
Sbjct: 320 RDAEEADYCIHTLNGRWFGGRQITAEAWDGTTDYQ 354
>gi|452984713|gb|EME84470.1| hypothetical protein MYCFIDRAFT_203037 [Pseudocercospora fijiensis
CIRAD86]
Length = 343
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
H+E +DL E + G S+ + + D G YV + +E A AL G+ G
Sbjct: 107 HYELTEDDLRELFERVGPTLSVRLLYDRQDRSQGTAYVIYEDERDARDALHKFDGQNANG 166
Query: 87 RPIIVDFSPVTDFREATCR 105
+PI + P R+A R
Sbjct: 167 QPIRISLMPSGPSRDAPPR 185
>gi|392592864|gb|EIW82190.1| RNA-binding domain-containing protein, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 306
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL +E +++G +E + I D +D G +++ E+A R ++ L+G GR I VD
Sbjct: 99 DLDDEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSAVEEATRCIQELNGVELNGRRIRVD 158
Query: 93 FSPVTD 98
+S VTD
Sbjct: 159 YS-VTD 163
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
ED +F+ +G+IE+L I +L+ G YV FR + RA++ ++G AGRP
Sbjct: 268 EDMLGRIFD---PFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRP 324
Query: 89 IIV 91
+ V
Sbjct: 325 MKV 327
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
ED +F+ +G+IE+L I +L+ G YV FR + RA++ ++G AGRP
Sbjct: 382 EDMLGRIFD---PFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRP 438
Query: 89 IIV 91
+ V
Sbjct: 439 MKV 441
>gi|395330687|gb|EJF63070.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 272
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL +E +++G +E + I D +D G ++ E+A R +K L+G GR I VD
Sbjct: 90 DLDDEFSRFGRVEKVVIVYDQRSDRSRGFGFITMSTTEEATRCIKELNGVELNGRRIRVD 149
Query: 93 FSPVTD 98
+S VTD
Sbjct: 150 YS-VTD 154
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DL+ +KYG++ + I D G +V+++ ++A +A+ L GR G
Sbjct: 25 FRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDKLDGRMLDG 84
Query: 87 RPIIVDFS 94
R I+V F+
Sbjct: 85 REIMVQFA 92
>gi|409081762|gb|EKM82121.1| hypothetical protein AGABI1DRAFT_112242 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198598|gb|EKV48524.1| hypothetical protein AGABI2DRAFT_192114 [Agaricus bisporus var.
bisporus H97]
Length = 275
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 34 DLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
DL +E +++G +E + I D +D G +++ ++AAR ++ L+G GR I VD
Sbjct: 97 DLDDEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVDEAARCIQELNGVELNGRRIRVD 156
Query: 93 FSPVTD 98
+S VTD
Sbjct: 157 YS-VTD 161
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DL+ +KYG++ + I D G +V+++ ++A +A+ L GR G
Sbjct: 25 FRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDKLDGRMLDG 84
Query: 87 RPIIVDFS 94
R I+V F+
Sbjct: 85 REIMVQFA 92
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
HF +DL +GE+E + + + G +VQFR+ QA AL+ ++G AG
Sbjct: 285 HFNVTEQDLQAVFEPFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKMNGFDLAG 344
Query: 87 RPIIV 91
RPI V
Sbjct: 345 RPIRV 349
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 13/87 (14%)
Query: 17 NPLDPRKIQEHFEDFYEDLFEELN-----KYGEIESLNICDNLADHMVGNVYVQFREEEQ 71
N DP +E +D+ ++L +++ +YG + + + N G+VY++F + +
Sbjct: 471 NMFDPE--EEEGDDWVKELEDDIRAEAERQYGHVVHIAVDPNSK----GDVYLKFDKVQG 524
Query: 72 AARALKSLSGRFYAGRPIIVDFSPVTD 98
A+K L+GR++ GR +++ SPV D
Sbjct: 525 GENAIKGLNGRYFGGR--MINASPVVD 549
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 29 EDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRP 88
++ +D+ EE NK+G + L + D + GNVYV+ A ++++L GR++ G+
Sbjct: 452 QEIRDDVIEECNKHGGVLHLYV-DKASPQ--GNVYVKCPTISAAVASVRALHGRYFGGKM 508
Query: 89 IIVDFSPVTDF 99
I + P+ ++
Sbjct: 509 ITAAYVPLPNY 519
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DLF ++YG++ + I D G +V+++ ++A +A+ L GR G
Sbjct: 25 FRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFAFVRYKYADEAQKAIDRLDGRNVDG 84
Query: 87 RPIIVDFSPVTDFREATCR 105
R I+V F+ EAT R
Sbjct: 85 RNIMVQFAKYGPNAEATQR 103
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 27 HFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
HF DL +GE+E + + + + G +VQFR+ QA AL+ ++G AG
Sbjct: 289 HFSITETDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDAGQAREALEKMNGFDLAG 348
Query: 87 RPIIV 91
RPI V
Sbjct: 349 RPIRV 353
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+ F +DL ++ GE+ + I D G +V+++ E++A +A+ L GR
Sbjct: 21 LNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQKAVDKLDGR 80
Query: 83 FYAGRPIIVDFS 94
GR I+V F+
Sbjct: 81 TVDGRDIMVQFA 92
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+ F +DL ++ GE+ + I D G +V+++ E++A +A+ L GR
Sbjct: 21 LNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQKAVDKLDGR 80
Query: 83 FYAGRPIIVDFS 94
GR I+V F+
Sbjct: 81 TVDGRDIMVQFA 92
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 24 IQEHFEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGR 82
+ F +DL ++ GE+ + I D G +V+++ E++A +A+ L GR
Sbjct: 21 LNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQKAVDKLDGR 80
Query: 83 FYAGRPIIVDFS 94
GR I+V F+
Sbjct: 81 TVDGRDIMVQFA 92
>gi|156387741|ref|XP_001634361.1| predicted protein [Nematostella vectensis]
gi|156221443|gb|EDO42298.1| predicted protein [Nematostella vectensis]
Length = 254
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 33 EDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIV 91
E L E +KYGE+E+ + D + G +V+F+E A A + +S G+ I+V
Sbjct: 68 ETLVEAFSKYGEVENCRLVRDFVTGFSRGYAFVEFKERWDAKTAYREISKCCIDGQEILV 127
Query: 92 DF 93
+F
Sbjct: 128 EF 129
>gi|6899884|emb|CAB71893.1| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana]
Length = 271
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 79/197 (40%), Gaps = 42/197 (21%)
Query: 19 LDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKS 78
DP + +EH D+ + YG++ ++ I N + +VQF +E A +AL++
Sbjct: 100 FDPIRTKEH------DIEKHFEPYGKVTNVRIRRNFS-------FVQFETQEDATKALEA 146
Query: 79 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 138
R + V+++ D +E GG R RR L Y
Sbjct: 147 TQRSKILDRVVSVEYALKDD---------DERDDRNGG-----------RSPRRSLSPVY 186
Query: 139 RRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRR----- 193
RRR S R SP + R R +GR Y+ + R SP + R
Sbjct: 187 RRRPSPDYGRRPSPGQGR----RPSPDYGRARSPEYDRYKGPAAYERRRSPDYGRRSSDY 242
Query: 194 GRSRSPGGRRYHSPVRE 210
GR RSPG RY SP R+
Sbjct: 243 GRQRSPGYDRYRSPKRK 259
>gi|198434018|ref|XP_002131881.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 5 [Ciona intestinalis]
Length = 273
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL EE + YG ++S+ + N G YV F + A A++ L G+ R + VD
Sbjct: 26 EDLEEEFSYYGRLDSVWVARNPP----GFAYVLFEDARDAKDAVRGLDGKIICDRKVRVD 81
Query: 93 FS 94
S
Sbjct: 82 IS 83
>gi|198434010|ref|XP_002131854.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 1 [Ciona intestinalis]
gi|198434012|ref|XP_002131856.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 2 [Ciona intestinalis]
Length = 342
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL EE + YG ++S+ + N G YV F + A A++ L G+ R + VD
Sbjct: 26 EDLEEEFSYYGRLDSVWVARNPP----GFAYVLFEDARDAKDAVRGLDGKIICDRKVRVD 81
Query: 93 FS 94
S
Sbjct: 82 IS 83
>gi|198434014|ref|XP_002131863.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 3 [Ciona intestinalis]
Length = 311
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL EE + YG ++S+ + N G YV F + A A++ L G+ R + VD
Sbjct: 26 EDLEEEFSYYGRLDSVWVARNPP----GFAYVLFEDARDAKDAVRGLDGKIICDRKVRVD 81
Query: 93 FS 94
S
Sbjct: 82 IS 83
>gi|336373181|gb|EGO01519.1| hypothetical protein SERLA73DRAFT_120183 [Serpula lacrymans var.
lacrymans S7.3]
Length = 210
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 34 DLFEELNKYGEIESLNIC--DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIV 91
DL EE +++G +E + I +D G +++ E+A R ++ L+G GR I V
Sbjct: 23 DLDEEFSRFGRVEKVTIVYDQRQSDRSRGFGFIKMSTVEEATRCIQELNGVDLNGRRIRV 82
Query: 92 DFSPVTD 98
D+S VTD
Sbjct: 83 DYS-VTD 88
>gi|198434016|ref|XP_002131866.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 4 [Ciona intestinalis]
Length = 301
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
EDL EE + YG ++S+ + N G YV F + A A++ L G+ R + VD
Sbjct: 26 EDLEEEFSYYGRLDSVWVARNPP----GFAYVLFEDARDAKDAVRGLDGKIICDRKVRVD 81
Query: 93 FS 94
S
Sbjct: 82 IS 83
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F + LF +KYG++ + I D G +V+++ ++A++A+ L GR G
Sbjct: 25 FRTTADGLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDG 84
Query: 87 RPIIVDFS 94
R I V F+
Sbjct: 85 REITVQFA 92
>gi|348686235|gb|EGZ26050.1| hypothetical protein PHYSODRAFT_285141 [Phytophthora sojae]
Length = 233
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 17 NPLDPRKIQEHFEDFY----------EDLFEELNKYGEIESLNICDNLADHMVGNVYVQF 66
N DPRK Q+ ++ + + L E +YG ++S+ + ++ G +V++
Sbjct: 18 NAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPEGKSRGYGFVEY 77
Query: 67 REEEQAARALKSLSGRFYAGRPIIVDF 93
+EE A K G+ GR ++VD
Sbjct: 78 EKEEDMKAAYKYADGKKIDGRRVVVDV 104
>gi|346327061|gb|EGX96657.1| arginine/serine-rich splicing factor, putative [Cordyceps militaris
CM01]
Length = 813
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 44/210 (20%)
Query: 33 EDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 92
+D+FE +KYG + +++ +VQ+ E+ +RA++SL G GR I ++
Sbjct: 368 KDVFEIFHKYGRLAQISLKSAYG-------FVQYHTVEEGSRAVQSLEGIEIKGRRIHLE 420
Query: 93 FSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP 152
S + D + R +RG RD R+ +Y R R R SP
Sbjct: 421 VSKLQD-KSKKERNKSPERGSRG------------RDGARK-GDKYYDRDERRGGRHHSP 466
Query: 153 YRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSP-------SHRRGRSRSP-GGR-R 203
R + H G Y RDK+++S R RS SP S R RS SP GGR R
Sbjct: 467 RR------QGHHGRDSSYSGRDKFHDSGRGRDRSRSPGYGRSDKSRYRKRSNSPYGGRSR 520
Query: 204 YHS-----PVREGSEERRAKI---EQWNRE 225
Y P R G+E +I ++ NRE
Sbjct: 521 YQDKQIDLPRRYGAEVPDVQIITPQEVNRE 550
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 143 SRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTS--PSHRRGRSRSP 199
S S+SRSRSP R H DRS SG R R + SR RR RS S P+ R RSRSP
Sbjct: 227 SASKSRSRSPV-SRQHRDRSESGSPARRVSRSRSPISRQRRARSESGTPARRATRSRSP 284
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 33 EDLFEELNKYGEIESLNI-CDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIV 91
EDL E +YG I + I D G Y+QF + A AL SL ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAEDALHSLDRKWVCGRQIEI 83
Query: 92 DFS 94
F+
Sbjct: 84 QFA 86
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 30 DFYEDLFEEL-----NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFY 84
D+ +DL E++ +KYG + ++ + G +YV+F + A A++ L+GR++
Sbjct: 550 DWDKDLAEDVKGECESKYGRVLAIKV----EKESQGEIYVKFETVDAAKNAIEGLNGRWF 605
Query: 85 AGRPIIVDF 93
GR I F
Sbjct: 606 GGRQITAAF 614
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 FEDFYEDLFEELNKYGEIESLNIC-DNLADHMVGNVYVQFREEEQAARALKSLSGRFYAG 86
F +DL+ ++YG++ + I D G +V+++ ++A +A++ L GR G
Sbjct: 25 FRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIERLDGREVDG 84
Query: 87 RPIIVDFS 94
R I+V F+
Sbjct: 85 RHIVVQFA 92
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 143 SRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTS--PSHRRGRSRSPG 200
S S+SRSRSP R H DRS SG R R + SR RR RS S P+ R RSRSP
Sbjct: 227 SASKSRSRSPV-SRQHRDRSESGSPARRVSRSRSPISRQRRARSESGTPARRATRSRSPV 285
Query: 201 GR 202
R
Sbjct: 286 KR 287
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,814,671,556
Number of Sequences: 23463169
Number of extensions: 219291348
Number of successful extensions: 1191638
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3532
Number of HSP's successfully gapped in prelim test: 12728
Number of HSP's that attempted gapping in prelim test: 995721
Number of HSP's gapped (non-prelim): 112418
length of query: 272
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 132
effective length of database: 9,074,351,707
effective search space: 1197814425324
effective search space used: 1197814425324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)